Multiple sequence alignment - TraesCS2A01G422700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G422700 chr2A 100.000 2910 0 0 1 2910 677532635 677529726 0.000000e+00 5374
1 TraesCS2A01G422700 chr2D 92.265 892 54 4 1359 2235 533138800 533137909 0.000000e+00 1251
2 TraesCS2A01G422700 chr2D 89.831 826 61 12 13 822 533149376 533148558 0.000000e+00 1038
3 TraesCS2A01G422700 chr2D 92.950 695 25 2 2240 2910 533137651 533136957 0.000000e+00 990
4 TraesCS2A01G422700 chr2D 96.144 389 15 0 973 1361 533139225 533138837 1.140000e-178 636
5 TraesCS2A01G422700 chr2B 89.056 996 78 18 13 983 632924168 632923179 0.000000e+00 1206
6 TraesCS2A01G422700 chr2B 92.939 694 22 7 2240 2910 632921132 632920443 0.000000e+00 985
7 TraesCS2A01G422700 chr2B 93.253 667 44 1 1359 2025 632922392 632921727 0.000000e+00 981
8 TraesCS2A01G422700 chr2B 95.078 386 19 0 976 1361 632922814 632922429 2.480000e-170 608
9 TraesCS2A01G422700 chr2B 85.446 213 19 3 2039 2239 632921651 632921439 8.170000e-51 211
10 TraesCS2A01G422700 chr6B 83.537 328 33 13 2581 2905 376339709 376339400 1.320000e-73 287
11 TraesCS2A01G422700 chr6B 83.699 319 31 12 2581 2896 201998505 201998805 6.140000e-72 281


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G422700 chr2A 677529726 677532635 2909 True 5374.0 5374 100.000000 1 2910 1 chr2A.!!$R1 2909
1 TraesCS2A01G422700 chr2D 533148558 533149376 818 True 1038.0 1038 89.831000 13 822 1 chr2D.!!$R1 809
2 TraesCS2A01G422700 chr2D 533136957 533139225 2268 True 959.0 1251 93.786333 973 2910 3 chr2D.!!$R2 1937
3 TraesCS2A01G422700 chr2B 632920443 632924168 3725 True 798.2 1206 91.154400 13 2910 5 chr2B.!!$R1 2897

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
22 23 0.529378 ACGCGACCTTAGATTTCCGT 59.471 50.0 15.93 0.0 0.0 4.69 F
464 470 0.677098 GGCGGTTTCCTTCCTCCTTC 60.677 60.0 0.00 0.0 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1175 1583 0.676184 AGTGAGCTCATGTGTCACGT 59.324 50.0 21.47 0.0 44.41 4.49 R
2060 2570 0.032952 CGACAAGGGAGTTCCACGAA 59.967 55.0 0.00 0.0 38.24 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.223433 ACTACGCGACCTTAGATTTCCG 60.223 50.000 15.93 0.00 0.00 4.30
22 23 0.529378 ACGCGACCTTAGATTTCCGT 59.471 50.000 15.93 0.00 0.00 4.69
23 24 0.921347 CGCGACCTTAGATTTCCGTG 59.079 55.000 0.00 0.00 0.00 4.94
91 92 3.149196 CCCTGGTATTTCATTCCCATCG 58.851 50.000 0.00 0.00 0.00 3.84
107 108 3.726517 CGCACTTTGGGTCCAGCG 61.727 66.667 6.90 6.90 39.17 5.18
183 187 2.798364 GCGGGAGGAGAGGCTAACC 61.798 68.421 0.00 0.00 0.00 2.85
184 188 1.381327 CGGGAGGAGAGGCTAACCA 60.381 63.158 11.17 0.00 39.06 3.67
185 189 0.760945 CGGGAGGAGAGGCTAACCAT 60.761 60.000 11.17 0.00 39.06 3.55
250 254 2.499214 GGCACCCCGCATGATAAAA 58.501 52.632 0.00 0.00 45.17 1.52
290 295 2.034999 TCCCACATTCCAACCGCC 59.965 61.111 0.00 0.00 0.00 6.13
292 297 3.439540 CCACATTCCAACCGCCGG 61.440 66.667 0.00 0.00 0.00 6.13
327 332 2.361104 GGTTCAGGCGGCAATCCA 60.361 61.111 13.08 0.00 0.00 3.41
349 354 1.383386 GGAGAGAGGAGGGGGTTCC 60.383 68.421 0.00 0.00 37.52 3.62
397 403 4.162690 GATCCCGACGCCCTTGCT 62.163 66.667 0.00 0.00 34.43 3.91
398 404 4.473520 ATCCCGACGCCCTTGCTG 62.474 66.667 0.00 0.00 34.43 4.41
456 462 2.818274 GATCGCGGCGGTTTCCTT 60.818 61.111 23.46 0.00 0.00 3.36
464 470 0.677098 GGCGGTTTCCTTCCTCCTTC 60.677 60.000 0.00 0.00 0.00 3.46
574 586 2.795231 ACTGGAGAACATGGTGATGG 57.205 50.000 0.00 0.00 33.39 3.51
648 665 6.744112 ACATGAATTGTGTGTAAACCGATTT 58.256 32.000 0.00 0.00 37.11 2.17
649 666 7.877003 ACATGAATTGTGTGTAAACCGATTTA 58.123 30.769 0.00 0.00 37.11 1.40
650 667 8.020819 ACATGAATTGTGTGTAAACCGATTTAG 58.979 33.333 0.00 0.00 37.11 1.85
651 668 6.375377 TGAATTGTGTGTAAACCGATTTAGC 58.625 36.000 0.00 0.00 30.79 3.09
701 725 1.015109 TGCGTTTTGGCGAGTTTGTA 58.985 45.000 0.00 0.00 35.06 2.41
716 740 5.068198 CGAGTTTGTATAGGGGTAGCTGTTA 59.932 44.000 0.00 0.00 0.00 2.41
849 882 6.801575 TGGAAACATGTAGGACAAACTTTTC 58.198 36.000 0.00 0.00 33.40 2.29
851 884 7.776030 TGGAAACATGTAGGACAAACTTTTCTA 59.224 33.333 0.00 0.00 33.40 2.10
884 919 5.322754 ACTAGAGGTTGCTACTGTTAGACA 58.677 41.667 0.00 0.00 0.00 3.41
907 942 2.505407 TGATTGAGGGACGTCATGGATT 59.495 45.455 18.91 0.00 0.00 3.01
983 1019 9.479549 AATGTGGAAAATAGTTCATTCATACCT 57.520 29.630 0.00 0.00 0.00 3.08
984 1020 8.877864 TGTGGAAAATAGTTCATTCATACCTT 57.122 30.769 0.00 0.00 0.00 3.50
985 1021 9.308000 TGTGGAAAATAGTTCATTCATACCTTT 57.692 29.630 0.00 0.00 0.00 3.11
1107 1515 1.373748 GTTTCTGGTCGCACGGCTA 60.374 57.895 0.00 0.00 0.00 3.93
1175 1583 2.224597 TGCAGCTCTTCCAGTTGAATGA 60.225 45.455 0.00 0.00 35.34 2.57
1196 1604 1.719600 GTGACACATGAGCTCACTCC 58.280 55.000 20.97 7.47 42.74 3.85
1262 1670 2.095853 CCACCGTGCTGATTGACATAAC 59.904 50.000 0.00 0.00 0.00 1.89
1528 1975 6.389906 AGCTTCCTTTGGAAAATGTTTATCG 58.610 36.000 0.53 0.00 41.54 2.92
1595 2042 9.716531 TGATCCACAATGATAATCTATGTCTTC 57.283 33.333 0.00 0.00 0.00 2.87
1633 2080 2.029918 GGATTCAAAACAGGACTGTGGC 60.030 50.000 5.63 0.00 44.13 5.01
1677 2124 0.253044 TTCCCTGAGAAGGCGATTGG 59.747 55.000 0.00 0.00 0.00 3.16
1716 2163 2.076863 GGACAAGGTTGATTCACTCGG 58.923 52.381 0.00 0.00 0.00 4.63
1726 2173 2.527951 ATTCACTCGGGCAGCAGGTC 62.528 60.000 0.00 0.00 0.00 3.85
1766 2213 3.318017 CTTGAGGAACTTCGTCATCGTT 58.682 45.455 13.55 0.00 41.55 3.85
1879 2326 0.827507 ATGAAAAGCCGTGCCCAAGT 60.828 50.000 0.00 0.00 0.00 3.16
1953 2400 3.421844 GTGGTCCAGGCTAGTTTCATTT 58.578 45.455 0.00 0.00 0.00 2.32
1966 2413 6.195983 GCTAGTTTCATTTTGCGATGAAGATG 59.804 38.462 9.11 0.00 44.33 2.90
1977 2424 4.142622 TGCGATGAAGATGTTTTGTCCATC 60.143 41.667 0.00 0.00 39.19 3.51
1978 2425 4.142622 GCGATGAAGATGTTTTGTCCATCA 60.143 41.667 0.00 0.00 40.93 3.07
1982 2429 6.505044 TGAAGATGTTTTGTCCATCATCTG 57.495 37.500 7.18 0.00 43.80 2.90
2002 2449 1.808945 GGTTCAGTCATCAGCAACCAG 59.191 52.381 0.00 0.00 37.13 4.00
2029 2476 5.124297 TGACCTGCAAATGTAATCAGTGATG 59.876 40.000 6.34 0.00 0.00 3.07
2058 2568 7.256012 GCCATCTAGGTAGTTTTATCTGCTAGT 60.256 40.741 0.00 0.00 40.61 2.57
2073 2583 2.074576 GCTAGTTTTCGTGGAACTCCC 58.925 52.381 4.58 0.00 38.28 4.30
2078 2588 2.249844 TTTCGTGGAACTCCCTTGTC 57.750 50.000 0.00 0.00 35.38 3.18
2080 2590 1.111116 TCGTGGAACTCCCTTGTCGT 61.111 55.000 0.00 0.00 35.38 4.34
2103 2613 9.201127 TCGTTGAATTCAGATGAGAATATGATC 57.799 33.333 8.41 0.00 37.24 2.92
2128 2638 9.747898 TCATCCTAAAACTATGGTTTGTGTAAT 57.252 29.630 8.06 0.00 43.90 1.89
2129 2639 9.787532 CATCCTAAAACTATGGTTTGTGTAATG 57.212 33.333 8.06 5.68 43.90 1.90
2141 2651 6.183360 TGGTTTGTGTAATGTGCACTGTTTAT 60.183 34.615 19.41 0.00 37.70 1.40
2143 2653 7.863375 GGTTTGTGTAATGTGCACTGTTTATTA 59.137 33.333 19.41 10.19 37.70 0.98
2144 2654 8.901748 GTTTGTGTAATGTGCACTGTTTATTAG 58.098 33.333 19.41 0.00 37.70 1.73
2154 2666 7.713507 TGTGCACTGTTTATTAGTTGACTAAGT 59.286 33.333 19.41 0.00 41.24 2.24
2246 3077 5.772521 CCATACTGAAAACCTGAACCTTTG 58.227 41.667 0.00 0.00 0.00 2.77
2254 3085 1.288127 CTGAACCTTTGCAGCCAGC 59.712 57.895 0.00 0.00 45.96 4.85
2268 3099 1.180029 GCCAGCCACAAAGATGATGT 58.820 50.000 0.00 0.00 0.00 3.06
2271 3102 2.094390 CCAGCCACAAAGATGATGTTGG 60.094 50.000 0.00 0.00 0.00 3.77
2302 3133 6.445357 ACGAAAACAAAGGTGACAACTTAT 57.555 33.333 6.08 0.00 0.00 1.73
2313 3144 5.048713 AGGTGACAACTTATAAAGCTGCAAC 60.049 40.000 1.02 0.00 0.00 4.17
2320 3151 8.290325 ACAACTTATAAAGCTGCAACTACTTTC 58.710 33.333 1.02 0.00 35.38 2.62
2350 3181 6.071728 CCATGAGTTGCCAGTTAGAGATTTTT 60.072 38.462 0.00 0.00 0.00 1.94
2444 3275 4.009675 AGGCGAACATTTCTAGCATGAAA 58.990 39.130 0.00 6.60 39.79 2.69
2469 3300 1.651240 CTGAAAGATGCAGGGTGCGG 61.651 60.000 0.00 0.00 41.71 5.69
2592 3447 4.106909 CCAGTACAAACCAAACGGAAAAC 58.893 43.478 0.00 0.00 0.00 2.43
2806 3661 0.179234 TGCACCGGTTCAAGAACTCA 59.821 50.000 2.97 1.98 40.94 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.223433 CGGAAATCTAAGGTCGCGTAGT 60.223 50.000 5.77 0.00 0.00 2.73
2 3 1.745087 ACGGAAATCTAAGGTCGCGTA 59.255 47.619 5.77 0.00 0.00 4.42
3 4 0.529378 ACGGAAATCTAAGGTCGCGT 59.471 50.000 5.77 0.00 0.00 6.01
4 5 0.921347 CACGGAAATCTAAGGTCGCG 59.079 55.000 0.00 0.00 0.00 5.87
5 6 1.659098 CACACGGAAATCTAAGGTCGC 59.341 52.381 0.00 0.00 0.00 5.19
6 7 2.268298 CCACACGGAAATCTAAGGTCG 58.732 52.381 0.00 0.00 0.00 4.79
7 8 2.007608 GCCACACGGAAATCTAAGGTC 58.992 52.381 0.00 0.00 0.00 3.85
8 9 1.628846 AGCCACACGGAAATCTAAGGT 59.371 47.619 0.00 0.00 0.00 3.50
9 10 2.009774 CAGCCACACGGAAATCTAAGG 58.990 52.381 0.00 0.00 0.00 2.69
10 11 1.398390 GCAGCCACACGGAAATCTAAG 59.602 52.381 0.00 0.00 0.00 2.18
11 12 1.448985 GCAGCCACACGGAAATCTAA 58.551 50.000 0.00 0.00 0.00 2.10
21 22 1.014564 GTAGAAGGACGCAGCCACAC 61.015 60.000 0.00 0.00 0.00 3.82
22 23 1.185618 AGTAGAAGGACGCAGCCACA 61.186 55.000 0.00 0.00 0.00 4.17
23 24 0.458716 GAGTAGAAGGACGCAGCCAC 60.459 60.000 0.00 0.00 0.00 5.01
91 92 3.365265 CCGCTGGACCCAAAGTGC 61.365 66.667 0.00 0.00 37.33 4.40
107 108 3.622756 CTCGATGATCGTGCTGCC 58.377 61.111 15.06 0.00 41.35 4.85
130 134 0.251787 ATTTTGGGACTGCTGGGGAC 60.252 55.000 0.00 0.00 0.00 4.46
131 135 0.039618 GATTTTGGGACTGCTGGGGA 59.960 55.000 0.00 0.00 0.00 4.81
178 182 1.551452 TTTTGGCGGGGAATGGTTAG 58.449 50.000 0.00 0.00 0.00 2.34
179 183 2.104170 GATTTTGGCGGGGAATGGTTA 58.896 47.619 0.00 0.00 0.00 2.85
183 187 0.175531 GTGGATTTTGGCGGGGAATG 59.824 55.000 0.00 0.00 0.00 2.67
184 188 0.252012 TGTGGATTTTGGCGGGGAAT 60.252 50.000 0.00 0.00 0.00 3.01
185 189 1.153989 TGTGGATTTTGGCGGGGAA 59.846 52.632 0.00 0.00 0.00 3.97
244 248 2.640184 CCCCGTTCTCACCCTTTTATC 58.360 52.381 0.00 0.00 0.00 1.75
250 254 2.284699 CTCCCCCGTTCTCACCCT 60.285 66.667 0.00 0.00 0.00 4.34
290 295 3.375443 TAGGCTGGACCCTCCTCCG 62.375 68.421 0.00 0.00 40.58 4.63
292 297 1.458588 CCTAGGCTGGACCCTCCTC 60.459 68.421 0.00 0.00 40.58 3.71
327 332 4.150454 CCCCTCCTCTCTCCGGCT 62.150 72.222 0.00 0.00 0.00 5.52
456 462 2.851263 TAAAGCAAAGCGAAGGAGGA 57.149 45.000 0.00 0.00 0.00 3.71
464 470 0.984109 CGCACCATTAAAGCAAAGCG 59.016 50.000 0.00 0.00 37.91 4.68
574 586 2.805099 CTCTTCCCTAATCAGCAATCGC 59.195 50.000 0.00 0.00 38.99 4.58
637 654 6.369615 TGTTTCCTACAGCTAAATCGGTTTAC 59.630 38.462 0.00 0.00 31.68 2.01
668 692 3.791973 AAACGCACAAAAGGAACATCA 57.208 38.095 0.00 0.00 0.00 3.07
701 725 3.936461 TCACCATAACAGCTACCCCTAT 58.064 45.455 0.00 0.00 0.00 2.57
884 919 1.208052 CCATGACGTCCCTCAATCACT 59.792 52.381 14.12 0.00 0.00 3.41
907 942 5.249622 TCCACTTTCCCAATATATATCGGCA 59.750 40.000 0.00 0.00 0.00 5.69
959 995 8.877864 AAGGTATGAATGAACTATTTTCCACA 57.122 30.769 0.00 0.00 0.00 4.17
983 1019 8.609176 GCATCGACATACCTGTAGAAAAATAAA 58.391 33.333 0.00 0.00 39.90 1.40
984 1020 7.225931 GGCATCGACATACCTGTAGAAAAATAA 59.774 37.037 0.00 0.00 39.90 1.40
985 1021 6.704493 GGCATCGACATACCTGTAGAAAAATA 59.296 38.462 0.00 0.00 39.90 1.40
1059 1467 1.668101 GACTCACTAGTGCCCCCTCG 61.668 65.000 18.45 3.00 35.56 4.63
1107 1515 0.839946 ACTTGTTCAGTGGCTCTGGT 59.160 50.000 15.86 3.52 43.76 4.00
1175 1583 0.676184 AGTGAGCTCATGTGTCACGT 59.324 50.000 21.47 0.00 44.41 4.49
1262 1670 1.690219 CCTCCAGGAATCGTCCCCAG 61.690 65.000 0.00 0.00 46.30 4.45
1528 1975 5.076873 ACCATTACATGTATATGCAACCCC 58.923 41.667 6.36 0.00 37.85 4.95
1554 2001 5.988287 TGTGGATCAATGCAGTGATAGTTA 58.012 37.500 27.97 13.31 38.38 2.24
1595 2042 5.577835 TGAATCCTGACAAAAACAGAAACG 58.422 37.500 0.00 0.00 37.54 3.60
1677 2124 1.359848 CGTGAGGTAGTTCATGTGCC 58.640 55.000 0.00 0.00 31.02 5.01
1716 2163 3.050275 GGTTGTCGACCTGCTGCC 61.050 66.667 14.12 2.45 45.55 4.85
1726 2173 1.891060 GCTCGCACTTCAGGTTGTCG 61.891 60.000 0.00 0.00 0.00 4.35
1766 2213 1.019278 GCGATCGACCTTTTCTGGCA 61.019 55.000 21.57 0.00 0.00 4.92
1871 2318 2.176045 TCTACGAATCTGACTTGGGCA 58.824 47.619 0.00 0.00 0.00 5.36
1879 2326 4.501571 GCCTTAGCCAATCTACGAATCTGA 60.502 45.833 0.00 0.00 0.00 3.27
1953 2400 3.567585 TGGACAAAACATCTTCATCGCAA 59.432 39.130 0.00 0.00 0.00 4.85
1977 2424 2.981898 TGCTGATGACTGAACCAGATG 58.018 47.619 0.45 0.00 35.18 2.90
1978 2425 3.341823 GTTGCTGATGACTGAACCAGAT 58.658 45.455 0.45 0.00 35.18 2.90
1982 2429 1.808945 CTGGTTGCTGATGACTGAACC 59.191 52.381 0.00 0.00 37.23 3.62
2029 2476 6.869388 GCAGATAAAACTACCTAGATGGCTAC 59.131 42.308 0.00 0.00 40.22 3.58
2058 2568 2.567985 GACAAGGGAGTTCCACGAAAA 58.432 47.619 0.00 0.00 38.24 2.29
2060 2570 0.032952 CGACAAGGGAGTTCCACGAA 59.967 55.000 0.00 0.00 38.24 3.85
2073 2583 6.471976 TTCTCATCTGAATTCAACGACAAG 57.528 37.500 9.88 5.88 0.00 3.16
2078 2588 8.985805 TGATCATATTCTCATCTGAATTCAACG 58.014 33.333 9.88 0.00 37.73 4.10
2103 2613 9.787532 CATTACACAAACCATAGTTTTAGGATG 57.212 33.333 0.00 0.00 43.82 3.51
2105 2615 8.788806 CACATTACACAAACCATAGTTTTAGGA 58.211 33.333 0.00 0.00 43.82 2.94
2109 2619 6.699642 GTGCACATTACACAAACCATAGTTTT 59.300 34.615 13.17 0.00 43.82 2.43
2122 2632 8.286800 TCAACTAATAAACAGTGCACATTACAC 58.713 33.333 21.04 0.00 38.35 2.90
2128 2638 7.713507 ACTTAGTCAACTAATAAACAGTGCACA 59.286 33.333 21.04 0.00 37.75 4.57
2129 2639 8.084590 ACTTAGTCAACTAATAAACAGTGCAC 57.915 34.615 9.40 9.40 37.75 4.57
2141 2651 8.389779 TCATGCAAAATGACTTAGTCAACTAA 57.610 30.769 19.42 4.01 45.96 2.24
2143 2653 6.569226 GCTCATGCAAAATGACTTAGTCAACT 60.569 38.462 19.42 6.82 41.55 3.16
2144 2654 5.570589 GCTCATGCAAAATGACTTAGTCAAC 59.429 40.000 19.42 7.33 41.55 3.18
2189 2713 7.286316 TGATGTGACAGTCAGATAGATGTACAT 59.714 37.037 13.06 8.43 29.83 2.29
2197 2721 7.465647 GCTGAATTTGATGTGACAGTCAGATAG 60.466 40.741 13.06 6.60 29.83 2.08
2246 3077 1.214589 CATCTTTGTGGCTGGCTGC 59.785 57.895 7.96 7.96 41.94 5.25
2254 3085 6.047870 TGAAAAACCAACATCATCTTTGTGG 58.952 36.000 0.00 0.00 0.00 4.17
2268 3099 5.758784 ACCTTTGTTTTCGTTGAAAAACCAA 59.241 32.000 6.31 5.43 44.70 3.67
2271 3102 6.074249 TGTCACCTTTGTTTTCGTTGAAAAAC 60.074 34.615 6.31 4.56 42.09 2.43
2302 3133 5.121768 GGATTCGAAAGTAGTTGCAGCTTTA 59.878 40.000 8.85 0.00 33.22 1.85
2313 3144 4.034510 GGCAACTCATGGATTCGAAAGTAG 59.965 45.833 0.00 0.00 0.00 2.57
2320 3151 1.742761 ACTGGCAACTCATGGATTCG 58.257 50.000 0.00 0.00 37.61 3.34
2444 3275 0.962356 CCTGCATCTTTCAGGCGGTT 60.962 55.000 0.00 0.00 43.88 4.44
2465 3296 2.229792 AGCTTCAGATTTTGTTCCGCA 58.770 42.857 0.00 0.00 0.00 5.69
2469 3300 6.765915 AGGGAATAGCTTCAGATTTTGTTC 57.234 37.500 0.00 0.00 32.70 3.18
2592 3447 8.223769 GGCAAATATACTACATCTGAAACATCG 58.776 37.037 0.00 0.00 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.