Multiple sequence alignment - TraesCS2A01G421200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G421200 chr2A 100.000 2720 0 0 1 2720 676978590 676975871 0.000000e+00 5024.0
1 TraesCS2A01G421200 chr2A 94.872 39 2 0 512 550 670639126 670639088 8.130000e-06 62.1
2 TraesCS2A01G421200 chr2A 100.000 30 0 0 522 551 769093713 769093742 3.780000e-04 56.5
3 TraesCS2A01G421200 chr2D 91.136 1320 75 12 728 2016 532287028 532285720 0.000000e+00 1751.0
4 TraesCS2A01G421200 chr2D 89.888 445 30 8 2021 2457 532274757 532274320 2.370000e-155 558.0
5 TraesCS2A01G421200 chr2D 88.438 320 23 6 669 983 532287333 532287023 9.200000e-100 374.0
6 TraesCS2A01G421200 chr2D 92.735 234 15 2 2487 2720 532274325 532274094 1.210000e-88 337.0
7 TraesCS2A01G421200 chr2D 83.085 201 29 3 6 204 144999830 144999633 7.740000e-41 178.0
8 TraesCS2A01G421200 chr2B 91.895 913 44 5 659 1554 632367956 632367057 0.000000e+00 1249.0
9 TraesCS2A01G421200 chr2B 89.266 708 60 6 2021 2719 632256796 632256096 0.000000e+00 872.0
10 TraesCS2A01G421200 chr2B 90.423 355 29 3 1620 1970 632367031 632366678 1.910000e-126 462.0
11 TraesCS2A01G421200 chr2B 84.951 206 28 2 1 204 135695221 135695017 3.550000e-49 206.0
12 TraesCS2A01G421200 chr2B 83.019 106 11 3 1917 2015 563307662 563307557 3.730000e-14 89.8
13 TraesCS2A01G421200 chr5A 83.832 334 41 6 829 1159 170111680 170111357 3.400000e-79 305.0
14 TraesCS2A01G421200 chr5A 82.609 276 38 6 1247 1522 170111247 170110982 4.530000e-58 235.0
15 TraesCS2A01G421200 chr5A 92.308 39 3 0 513 551 65979449 65979487 3.780000e-04 56.5
16 TraesCS2A01G421200 chr5D 82.237 304 42 10 867 1166 135054766 135055061 4.500000e-63 252.0
17 TraesCS2A01G421200 chr5D 85.635 181 22 3 26 204 397657936 397657758 1.290000e-43 187.0
18 TraesCS2A01G421200 chr5D 94.872 39 2 0 510 548 34224340 34224378 8.130000e-06 62.1
19 TraesCS2A01G421200 chr7D 86.408 206 25 2 1 204 162199536 162199740 3.530000e-54 222.0
20 TraesCS2A01G421200 chr7D 84.058 207 29 3 1 204 348104121 348104326 2.140000e-46 196.0
21 TraesCS2A01G421200 chr7D 75.175 286 54 14 271 549 348104421 348104696 4.760000e-23 119.0
22 TraesCS2A01G421200 chr7B 85.075 201 28 1 6 204 552113999 552113799 1.280000e-48 204.0
23 TraesCS2A01G421200 chr7B 79.457 258 34 11 210 456 552113754 552113505 6.030000e-37 165.0
24 TraesCS2A01G421200 chr7B 93.023 43 3 0 508 550 120857199 120857157 2.260000e-06 63.9
25 TraesCS2A01G421200 chr7A 84.236 203 28 3 1 201 518551883 518552083 7.680000e-46 195.0
26 TraesCS2A01G421200 chr7A 75.433 289 54 14 249 531 341012988 341012711 1.020000e-24 124.0
27 TraesCS2A01G421200 chr4D 83.092 207 31 3 1 204 495616381 495616586 4.630000e-43 185.0
28 TraesCS2A01G421200 chr3D 82.524 206 32 3 1 204 277068563 277068766 7.740000e-41 178.0
29 TraesCS2A01G421200 chr3D 94.444 36 2 0 513 548 545025701 545025736 3.780000e-04 56.5
30 TraesCS2A01G421200 chr6A 94.737 38 2 0 510 547 547597539 547597502 2.920000e-05 60.2
31 TraesCS2A01G421200 chr1D 94.872 39 1 1 513 551 17239321 17239284 2.920000e-05 60.2
32 TraesCS2A01G421200 chr3B 100.000 31 0 0 520 550 680480119 680480089 1.050000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G421200 chr2A 676975871 676978590 2719 True 5024.0 5024 100.0000 1 2720 1 chr2A.!!$R2 2719
1 TraesCS2A01G421200 chr2D 532285720 532287333 1613 True 1062.5 1751 89.7870 669 2016 2 chr2D.!!$R3 1347
2 TraesCS2A01G421200 chr2D 532274094 532274757 663 True 447.5 558 91.3115 2021 2720 2 chr2D.!!$R2 699
3 TraesCS2A01G421200 chr2B 632256096 632256796 700 True 872.0 872 89.2660 2021 2719 1 chr2B.!!$R3 698
4 TraesCS2A01G421200 chr2B 632366678 632367956 1278 True 855.5 1249 91.1590 659 1970 2 chr2B.!!$R4 1311
5 TraesCS2A01G421200 chr5A 170110982 170111680 698 True 270.0 305 83.2205 829 1522 2 chr5A.!!$R1 693


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
441 442 0.03213 TTGCGAGAGAAAGTGCGTCT 59.968 50.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2306 2630 0.250513 GTCGACTTCAAGCCCCTCAT 59.749 55.0 8.7 0.0 0.0 2.9 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.079397 CTACAAAATCCGCGGATAAAGTC 57.921 43.478 39.08 0.00 33.97 3.01
23 24 3.340034 ACAAAATCCGCGGATAAAGTCA 58.660 40.909 39.08 11.69 33.97 3.41
24 25 3.754323 ACAAAATCCGCGGATAAAGTCAA 59.246 39.130 39.08 10.84 33.97 3.18
25 26 4.095610 CAAAATCCGCGGATAAAGTCAAC 58.904 43.478 39.08 0.00 33.97 3.18
26 27 1.949465 ATCCGCGGATAAAGTCAACC 58.051 50.000 38.39 0.00 32.36 3.77
27 28 0.609151 TCCGCGGATAAAGTCAACCA 59.391 50.000 27.28 0.00 0.00 3.67
28 29 0.725117 CCGCGGATAAAGTCAACCAC 59.275 55.000 24.07 0.00 0.00 4.16
29 30 0.368907 CGCGGATAAAGTCAACCACG 59.631 55.000 0.00 0.00 0.00 4.94
30 31 0.096454 GCGGATAAAGTCAACCACGC 59.904 55.000 0.00 0.00 38.94 5.34
31 32 1.434555 CGGATAAAGTCAACCACGCA 58.565 50.000 0.00 0.00 0.00 5.24
32 33 2.006888 CGGATAAAGTCAACCACGCAT 58.993 47.619 0.00 0.00 0.00 4.73
33 34 2.030457 CGGATAAAGTCAACCACGCATC 59.970 50.000 0.00 0.00 0.00 3.91
34 35 2.030457 GGATAAAGTCAACCACGCATCG 59.970 50.000 0.00 0.00 0.00 3.84
35 36 0.793861 TAAAGTCAACCACGCATCGC 59.206 50.000 0.00 0.00 0.00 4.58
36 37 1.163420 AAAGTCAACCACGCATCGCA 61.163 50.000 0.00 0.00 0.00 5.10
37 38 1.841663 AAGTCAACCACGCATCGCAC 61.842 55.000 0.00 0.00 0.00 5.34
38 39 2.280457 TCAACCACGCATCGCACA 60.280 55.556 0.00 0.00 0.00 4.57
39 40 1.889573 TCAACCACGCATCGCACAA 60.890 52.632 0.00 0.00 0.00 3.33
40 41 1.725625 CAACCACGCATCGCACAAC 60.726 57.895 0.00 0.00 0.00 3.32
41 42 2.183504 AACCACGCATCGCACAACA 61.184 52.632 0.00 0.00 0.00 3.33
42 43 1.719725 AACCACGCATCGCACAACAA 61.720 50.000 0.00 0.00 0.00 2.83
43 44 1.725625 CCACGCATCGCACAACAAC 60.726 57.895 0.00 0.00 0.00 3.32
44 45 1.279539 CACGCATCGCACAACAACT 59.720 52.632 0.00 0.00 0.00 3.16
45 46 0.722469 CACGCATCGCACAACAACTC 60.722 55.000 0.00 0.00 0.00 3.01
46 47 1.157257 ACGCATCGCACAACAACTCA 61.157 50.000 0.00 0.00 0.00 3.41
47 48 0.166597 CGCATCGCACAACAACTCAT 59.833 50.000 0.00 0.00 0.00 2.90
48 49 1.787989 CGCATCGCACAACAACTCATC 60.788 52.381 0.00 0.00 0.00 2.92
49 50 1.466360 GCATCGCACAACAACTCATCC 60.466 52.381 0.00 0.00 0.00 3.51
50 51 2.079158 CATCGCACAACAACTCATCCT 58.921 47.619 0.00 0.00 0.00 3.24
51 52 1.795768 TCGCACAACAACTCATCCTC 58.204 50.000 0.00 0.00 0.00 3.71
52 53 0.798776 CGCACAACAACTCATCCTCC 59.201 55.000 0.00 0.00 0.00 4.30
53 54 1.877680 CGCACAACAACTCATCCTCCA 60.878 52.381 0.00 0.00 0.00 3.86
54 55 2.440409 GCACAACAACTCATCCTCCAT 58.560 47.619 0.00 0.00 0.00 3.41
55 56 2.163010 GCACAACAACTCATCCTCCATG 59.837 50.000 0.00 0.00 0.00 3.66
56 57 2.751259 CACAACAACTCATCCTCCATGG 59.249 50.000 4.97 4.97 32.64 3.66
57 58 2.376518 ACAACAACTCATCCTCCATGGT 59.623 45.455 12.58 0.00 37.07 3.55
58 59 3.181429 ACAACAACTCATCCTCCATGGTT 60.181 43.478 12.58 0.00 37.07 3.67
59 60 3.077484 ACAACTCATCCTCCATGGTTG 57.923 47.619 12.58 8.70 42.98 3.77
60 61 2.644299 ACAACTCATCCTCCATGGTTGA 59.356 45.455 12.58 9.98 41.53 3.18
73 74 3.478540 GGTTGAGTACCCTGCCATC 57.521 57.895 0.00 0.00 41.43 3.51
74 75 0.107165 GGTTGAGTACCCTGCCATCC 60.107 60.000 0.00 0.00 41.43 3.51
75 76 0.912486 GTTGAGTACCCTGCCATCCT 59.088 55.000 0.00 0.00 0.00 3.24
76 77 1.282157 GTTGAGTACCCTGCCATCCTT 59.718 52.381 0.00 0.00 0.00 3.36
77 78 1.204146 TGAGTACCCTGCCATCCTTC 58.796 55.000 0.00 0.00 0.00 3.46
78 79 0.470341 GAGTACCCTGCCATCCTTCC 59.530 60.000 0.00 0.00 0.00 3.46
79 80 0.044855 AGTACCCTGCCATCCTTCCT 59.955 55.000 0.00 0.00 0.00 3.36
80 81 1.294068 AGTACCCTGCCATCCTTCCTA 59.706 52.381 0.00 0.00 0.00 2.94
81 82 1.416772 GTACCCTGCCATCCTTCCTAC 59.583 57.143 0.00 0.00 0.00 3.18
82 83 0.044855 ACCCTGCCATCCTTCCTACT 59.955 55.000 0.00 0.00 0.00 2.57
83 84 0.761802 CCCTGCCATCCTTCCTACTC 59.238 60.000 0.00 0.00 0.00 2.59
84 85 1.694048 CCCTGCCATCCTTCCTACTCT 60.694 57.143 0.00 0.00 0.00 3.24
85 86 1.415659 CCTGCCATCCTTCCTACTCTG 59.584 57.143 0.00 0.00 0.00 3.35
86 87 2.392662 CTGCCATCCTTCCTACTCTGA 58.607 52.381 0.00 0.00 0.00 3.27
87 88 2.768527 CTGCCATCCTTCCTACTCTGAA 59.231 50.000 0.00 0.00 0.00 3.02
88 89 3.181329 TGCCATCCTTCCTACTCTGAAA 58.819 45.455 0.00 0.00 0.00 2.69
89 90 3.587061 TGCCATCCTTCCTACTCTGAAAA 59.413 43.478 0.00 0.00 0.00 2.29
90 91 4.042809 TGCCATCCTTCCTACTCTGAAAAA 59.957 41.667 0.00 0.00 0.00 1.94
105 106 2.253513 AAAAACGACATGGCCTCCG 58.746 52.632 3.32 4.65 0.00 4.63
106 107 0.250553 AAAAACGACATGGCCTCCGA 60.251 50.000 3.32 0.00 0.00 4.55
107 108 0.250553 AAAACGACATGGCCTCCGAA 60.251 50.000 3.32 0.00 0.00 4.30
108 109 0.250553 AAACGACATGGCCTCCGAAA 60.251 50.000 3.32 0.00 0.00 3.46
109 110 0.250553 AACGACATGGCCTCCGAAAA 60.251 50.000 3.32 0.00 0.00 2.29
110 111 0.035439 ACGACATGGCCTCCGAAAAT 60.035 50.000 3.32 0.00 0.00 1.82
111 112 1.208535 ACGACATGGCCTCCGAAAATA 59.791 47.619 3.32 0.00 0.00 1.40
112 113 2.285083 CGACATGGCCTCCGAAAATAA 58.715 47.619 3.32 0.00 0.00 1.40
113 114 2.287915 CGACATGGCCTCCGAAAATAAG 59.712 50.000 3.32 0.00 0.00 1.73
114 115 2.024414 ACATGGCCTCCGAAAATAAGC 58.976 47.619 3.32 0.00 0.00 3.09
115 116 2.301346 CATGGCCTCCGAAAATAAGCT 58.699 47.619 3.32 0.00 0.00 3.74
116 117 2.038387 TGGCCTCCGAAAATAAGCTC 57.962 50.000 3.32 0.00 0.00 4.09
117 118 1.280710 TGGCCTCCGAAAATAAGCTCA 59.719 47.619 3.32 0.00 0.00 4.26
118 119 2.092429 TGGCCTCCGAAAATAAGCTCAT 60.092 45.455 3.32 0.00 0.00 2.90
119 120 2.291741 GGCCTCCGAAAATAAGCTCATG 59.708 50.000 0.00 0.00 0.00 3.07
120 121 2.291741 GCCTCCGAAAATAAGCTCATGG 59.708 50.000 0.00 0.00 0.00 3.66
121 122 2.880890 CCTCCGAAAATAAGCTCATGGG 59.119 50.000 0.00 0.00 0.00 4.00
122 123 2.291741 CTCCGAAAATAAGCTCATGGGC 59.708 50.000 10.42 10.42 0.00 5.36
123 124 2.023673 CCGAAAATAAGCTCATGGGCA 58.976 47.619 22.09 0.00 34.17 5.36
124 125 2.624838 CCGAAAATAAGCTCATGGGCAT 59.375 45.455 22.09 11.15 34.17 4.40
125 126 3.068590 CCGAAAATAAGCTCATGGGCATT 59.931 43.478 22.09 13.42 34.17 3.56
126 127 4.441913 CCGAAAATAAGCTCATGGGCATTT 60.442 41.667 22.09 14.85 34.17 2.32
127 128 4.505191 CGAAAATAAGCTCATGGGCATTTG 59.495 41.667 22.09 6.62 34.17 2.32
128 129 5.663456 GAAAATAAGCTCATGGGCATTTGA 58.337 37.500 22.09 0.00 34.17 2.69
129 130 4.660789 AATAAGCTCATGGGCATTTGAC 57.339 40.909 22.09 0.00 34.17 3.18
130 131 1.188863 AAGCTCATGGGCATTTGACC 58.811 50.000 22.09 0.00 45.93 4.02
137 138 1.584495 GGGCATTTGACCGAACACC 59.416 57.895 0.00 0.00 30.66 4.16
138 139 0.893727 GGGCATTTGACCGAACACCT 60.894 55.000 0.00 0.00 30.66 4.00
139 140 0.240945 GGCATTTGACCGAACACCTG 59.759 55.000 0.00 0.00 0.00 4.00
140 141 0.387239 GCATTTGACCGAACACCTGC 60.387 55.000 0.00 0.00 0.00 4.85
141 142 0.240945 CATTTGACCGAACACCTGCC 59.759 55.000 0.00 0.00 0.00 4.85
142 143 0.179004 ATTTGACCGAACACCTGCCA 60.179 50.000 0.00 0.00 0.00 4.92
143 144 0.817634 TTTGACCGAACACCTGCCAG 60.818 55.000 0.00 0.00 0.00 4.85
144 145 2.358737 GACCGAACACCTGCCAGG 60.359 66.667 9.83 9.83 42.49 4.45
145 146 4.643387 ACCGAACACCTGCCAGGC 62.643 66.667 11.63 3.66 39.63 4.85
147 148 4.988598 CGAACACCTGCCAGGCGT 62.989 66.667 11.63 4.14 39.63 5.68
148 149 2.345991 GAACACCTGCCAGGCGTA 59.654 61.111 11.63 0.00 39.63 4.42
149 150 1.741770 GAACACCTGCCAGGCGTAG 60.742 63.158 11.63 0.00 39.63 3.51
150 151 2.450479 GAACACCTGCCAGGCGTAGT 62.450 60.000 11.63 1.52 39.63 2.73
151 152 2.434884 CACCTGCCAGGCGTAGTG 60.435 66.667 11.63 10.33 39.63 2.74
152 153 3.706373 ACCTGCCAGGCGTAGTGG 61.706 66.667 11.63 6.34 39.63 4.00
161 162 2.203070 GCGTAGTGGCCTCCATGG 60.203 66.667 4.97 4.97 35.28 3.66
162 163 2.731571 GCGTAGTGGCCTCCATGGA 61.732 63.158 15.27 15.27 35.28 3.41
163 164 1.443407 CGTAGTGGCCTCCATGGAG 59.557 63.158 31.69 31.69 41.63 3.86
172 173 3.442996 CTCCATGGAGGTCGTTGAC 57.557 57.895 31.14 0.00 38.51 3.18
173 174 0.608130 CTCCATGGAGGTCGTTGACA 59.392 55.000 31.14 0.00 38.51 3.58
174 175 0.320374 TCCATGGAGGTCGTTGACAC 59.680 55.000 11.44 0.00 39.02 3.67
175 176 3.356983 TCCATGGAGGTCGTTGACACG 62.357 57.143 11.44 0.00 41.52 4.49
183 184 2.256158 CGTTGACACGGCGGTAGA 59.744 61.111 13.24 0.00 43.16 2.59
184 185 1.800315 CGTTGACACGGCGGTAGAG 60.800 63.158 13.24 0.00 43.16 2.43
185 186 2.092882 GTTGACACGGCGGTAGAGC 61.093 63.158 13.24 0.00 0.00 4.09
186 187 3.620300 TTGACACGGCGGTAGAGCG 62.620 63.158 13.24 0.00 38.18 5.03
187 188 4.112341 GACACGGCGGTAGAGCGT 62.112 66.667 13.24 0.00 38.18 5.07
188 189 2.747460 ACACGGCGGTAGAGCGTA 60.747 61.111 13.24 0.00 38.18 4.42
189 190 2.277756 CACGGCGGTAGAGCGTAC 60.278 66.667 13.24 0.00 38.18 3.67
190 191 3.512516 ACGGCGGTAGAGCGTACC 61.513 66.667 13.24 7.98 38.18 3.34
191 192 3.207669 CGGCGGTAGAGCGTACCT 61.208 66.667 14.30 0.00 38.18 3.08
192 193 2.412112 GGCGGTAGAGCGTACCTG 59.588 66.667 14.30 9.85 38.18 4.00
193 194 2.412112 GCGGTAGAGCGTACCTGG 59.588 66.667 14.30 0.00 35.49 4.45
194 195 3.117372 CGGTAGAGCGTACCTGGG 58.883 66.667 14.30 0.00 35.49 4.45
195 196 2.813200 GGTAGAGCGTACCTGGGC 59.187 66.667 10.27 0.00 34.82 5.36
196 197 2.056223 GGTAGAGCGTACCTGGGCA 61.056 63.158 10.27 0.00 34.82 5.36
197 198 1.610554 GGTAGAGCGTACCTGGGCAA 61.611 60.000 10.27 0.00 34.82 4.52
198 199 0.248289 GTAGAGCGTACCTGGGCAAA 59.752 55.000 0.00 0.00 0.00 3.68
199 200 0.248289 TAGAGCGTACCTGGGCAAAC 59.752 55.000 0.00 0.00 0.00 2.93
200 201 2.358247 AGCGTACCTGGGCAAACG 60.358 61.111 0.00 3.79 38.34 3.60
201 202 3.428282 GCGTACCTGGGCAAACGG 61.428 66.667 12.70 0.00 35.93 4.44
202 203 3.428282 CGTACCTGGGCAAACGGC 61.428 66.667 0.00 0.00 43.74 5.68
203 204 2.033602 GTACCTGGGCAAACGGCT 59.966 61.111 0.00 0.00 44.01 5.52
204 205 2.033448 TACCTGGGCAAACGGCTG 59.967 61.111 0.00 0.00 44.01 4.85
205 206 2.824880 TACCTGGGCAAACGGCTGT 61.825 57.895 0.00 0.00 44.01 4.40
206 207 2.741486 TACCTGGGCAAACGGCTGTC 62.741 60.000 0.00 0.00 44.01 3.51
207 208 2.594303 CTGGGCAAACGGCTGTCA 60.594 61.111 0.00 0.00 44.01 3.58
208 209 2.124109 TGGGCAAACGGCTGTCAA 60.124 55.556 0.00 0.00 44.01 3.18
209 210 1.526575 CTGGGCAAACGGCTGTCAAT 61.527 55.000 0.00 0.00 44.01 2.57
210 211 1.080569 GGGCAAACGGCTGTCAATG 60.081 57.895 0.00 0.00 44.01 2.82
211 212 1.734117 GGCAAACGGCTGTCAATGC 60.734 57.895 17.97 17.97 44.01 3.56
212 213 1.286880 GCAAACGGCTGTCAATGCT 59.713 52.632 18.59 0.00 40.25 3.79
213 214 0.730494 GCAAACGGCTGTCAATGCTC 60.730 55.000 18.59 0.00 40.25 4.26
214 215 0.453282 CAAACGGCTGTCAATGCTCG 60.453 55.000 0.00 0.00 0.00 5.03
215 216 0.884704 AAACGGCTGTCAATGCTCGT 60.885 50.000 0.00 0.00 38.32 4.18
216 217 0.884704 AACGGCTGTCAATGCTCGTT 60.885 50.000 0.00 0.00 40.01 3.85
217 218 1.133253 CGGCTGTCAATGCTCGTTG 59.867 57.895 0.00 0.00 0.00 4.10
218 219 1.154150 GGCTGTCAATGCTCGTTGC 60.154 57.895 0.00 0.00 43.25 4.17
219 220 1.510623 GCTGTCAATGCTCGTTGCG 60.511 57.895 0.00 0.00 46.63 4.85
220 221 1.900585 GCTGTCAATGCTCGTTGCGA 61.901 55.000 0.00 0.00 46.63 5.10
221 222 0.512518 CTGTCAATGCTCGTTGCGAA 59.487 50.000 0.00 0.00 46.63 4.70
222 223 0.234625 TGTCAATGCTCGTTGCGAAC 59.765 50.000 0.00 0.00 46.63 3.95
235 236 2.553770 CGAACGTTCGGCAATGCA 59.446 55.556 36.53 0.00 46.30 3.96
236 237 1.134487 CGAACGTTCGGCAATGCAT 59.866 52.632 36.53 0.00 46.30 3.96
237 238 1.127571 CGAACGTTCGGCAATGCATG 61.128 55.000 36.53 10.09 46.30 4.06
238 239 0.109781 GAACGTTCGGCAATGCATGT 60.110 50.000 13.36 0.00 0.00 3.21
239 240 0.387112 AACGTTCGGCAATGCATGTG 60.387 50.000 7.79 2.08 0.00 3.21
240 241 1.209898 CGTTCGGCAATGCATGTGT 59.790 52.632 7.79 0.00 0.00 3.72
241 242 1.066656 CGTTCGGCAATGCATGTGTG 61.067 55.000 7.79 0.00 0.00 3.82
242 243 0.733566 GTTCGGCAATGCATGTGTGG 60.734 55.000 7.79 0.00 0.00 4.17
243 244 2.489539 TTCGGCAATGCATGTGTGGC 62.490 55.000 7.79 12.20 34.67 5.01
244 245 2.507547 GGCAATGCATGTGTGGCG 60.508 61.111 7.79 0.00 0.00 5.69
245 246 2.507547 GCAATGCATGTGTGGCGG 60.508 61.111 0.00 0.00 0.00 6.13
246 247 2.507547 CAATGCATGTGTGGCGGC 60.508 61.111 0.00 0.00 0.00 6.53
247 248 3.762247 AATGCATGTGTGGCGGCC 61.762 61.111 13.32 13.32 0.00 6.13
251 252 3.129502 CATGTGTGGCGGCCAGAG 61.130 66.667 24.58 5.65 32.34 3.35
252 253 3.321648 ATGTGTGGCGGCCAGAGA 61.322 61.111 24.58 21.19 32.34 3.10
253 254 2.673200 ATGTGTGGCGGCCAGAGAT 61.673 57.895 24.58 22.63 32.34 2.75
254 255 1.337384 ATGTGTGGCGGCCAGAGATA 61.337 55.000 24.63 12.63 29.34 1.98
255 256 1.521681 GTGTGGCGGCCAGAGATAC 60.522 63.158 24.58 10.19 32.34 2.24
256 257 1.987306 TGTGGCGGCCAGAGATACA 60.987 57.895 24.58 13.02 32.34 2.29
257 258 1.227380 GTGGCGGCCAGAGATACAG 60.227 63.158 24.58 0.00 32.34 2.74
258 259 1.685765 TGGCGGCCAGAGATACAGT 60.686 57.895 19.77 0.00 0.00 3.55
259 260 1.227380 GGCGGCCAGAGATACAGTG 60.227 63.158 15.62 0.00 0.00 3.66
260 261 1.227380 GCGGCCAGAGATACAGTGG 60.227 63.158 2.24 0.00 0.00 4.00
262 263 4.427394 GCCAGAGATACAGTGGCG 57.573 61.111 0.00 0.00 46.95 5.69
263 264 1.227380 GCCAGAGATACAGTGGCGG 60.227 63.158 0.00 0.00 46.95 6.13
264 265 1.227380 CCAGAGATACAGTGGCGGC 60.227 63.158 0.00 0.00 0.00 6.53
265 266 1.517361 CAGAGATACAGTGGCGGCA 59.483 57.895 7.97 7.97 0.00 5.69
266 267 0.108186 CAGAGATACAGTGGCGGCAA 60.108 55.000 15.50 0.00 0.00 4.52
267 268 0.108138 AGAGATACAGTGGCGGCAAC 60.108 55.000 15.50 8.43 0.00 4.17
268 269 0.391130 GAGATACAGTGGCGGCAACA 60.391 55.000 15.50 0.00 0.00 3.33
269 270 0.391661 AGATACAGTGGCGGCAACAG 60.392 55.000 15.50 9.25 0.00 3.16
270 271 0.391130 GATACAGTGGCGGCAACAGA 60.391 55.000 15.50 0.00 0.00 3.41
271 272 0.391661 ATACAGTGGCGGCAACAGAG 60.392 55.000 15.50 4.47 0.00 3.35
272 273 2.449031 TACAGTGGCGGCAACAGAGG 62.449 60.000 15.50 2.12 0.00 3.69
273 274 3.560251 AGTGGCGGCAACAGAGGT 61.560 61.111 15.50 0.00 0.00 3.85
274 275 3.357079 GTGGCGGCAACAGAGGTG 61.357 66.667 15.50 0.00 0.00 4.00
275 276 4.641645 TGGCGGCAACAGAGGTGG 62.642 66.667 10.22 0.00 0.00 4.61
276 277 4.329545 GGCGGCAACAGAGGTGGA 62.330 66.667 3.07 0.00 0.00 4.02
277 278 2.743928 GCGGCAACAGAGGTGGAG 60.744 66.667 0.00 0.00 0.00 3.86
278 279 2.046892 CGGCAACAGAGGTGGAGG 60.047 66.667 0.00 0.00 0.00 4.30
279 280 2.883828 CGGCAACAGAGGTGGAGGT 61.884 63.158 0.00 0.00 0.00 3.85
280 281 1.456287 GGCAACAGAGGTGGAGGTT 59.544 57.895 0.00 0.00 0.00 3.50
281 282 0.890996 GGCAACAGAGGTGGAGGTTG 60.891 60.000 0.00 0.00 42.56 3.77
282 283 2.633860 CAACAGAGGTGGAGGTTGC 58.366 57.895 0.00 0.00 34.86 4.17
283 284 0.179020 CAACAGAGGTGGAGGTTGCA 60.179 55.000 0.00 0.00 34.86 4.08
284 285 0.109342 AACAGAGGTGGAGGTTGCAG 59.891 55.000 0.00 0.00 0.00 4.41
285 286 0.764369 ACAGAGGTGGAGGTTGCAGA 60.764 55.000 0.00 0.00 0.00 4.26
286 287 0.617413 CAGAGGTGGAGGTTGCAGAT 59.383 55.000 0.00 0.00 0.00 2.90
287 288 0.617413 AGAGGTGGAGGTTGCAGATG 59.383 55.000 0.00 0.00 0.00 2.90
288 289 1.001641 AGGTGGAGGTTGCAGATGC 60.002 57.895 0.00 0.00 42.50 3.91
298 299 4.904466 GCAGATGCAAAGCAAGGG 57.096 55.556 0.00 0.00 43.62 3.95
299 300 1.217244 GCAGATGCAAAGCAAGGGG 59.783 57.895 0.00 0.00 43.62 4.79
300 301 1.895238 CAGATGCAAAGCAAGGGGG 59.105 57.895 0.00 0.00 43.62 5.40
301 302 0.901580 CAGATGCAAAGCAAGGGGGT 60.902 55.000 0.00 0.00 43.62 4.95
302 303 0.704076 AGATGCAAAGCAAGGGGGTA 59.296 50.000 0.00 0.00 43.62 3.69
303 304 1.077005 AGATGCAAAGCAAGGGGGTAA 59.923 47.619 0.00 0.00 43.62 2.85
304 305 1.899142 GATGCAAAGCAAGGGGGTAAA 59.101 47.619 0.00 0.00 43.62 2.01
305 306 1.337118 TGCAAAGCAAGGGGGTAAAG 58.663 50.000 0.00 0.00 34.76 1.85
306 307 1.338107 GCAAAGCAAGGGGGTAAAGT 58.662 50.000 0.00 0.00 0.00 2.66
307 308 2.158445 TGCAAAGCAAGGGGGTAAAGTA 60.158 45.455 0.00 0.00 34.76 2.24
308 309 2.492088 GCAAAGCAAGGGGGTAAAGTAG 59.508 50.000 0.00 0.00 0.00 2.57
309 310 3.812882 GCAAAGCAAGGGGGTAAAGTAGA 60.813 47.826 0.00 0.00 0.00 2.59
310 311 4.010349 CAAAGCAAGGGGGTAAAGTAGAG 58.990 47.826 0.00 0.00 0.00 2.43
311 312 2.197465 AGCAAGGGGGTAAAGTAGAGG 58.803 52.381 0.00 0.00 0.00 3.69
312 313 2.193993 GCAAGGGGGTAAAGTAGAGGA 58.806 52.381 0.00 0.00 0.00 3.71
313 314 2.170817 GCAAGGGGGTAAAGTAGAGGAG 59.829 54.545 0.00 0.00 0.00 3.69
314 315 3.451890 CAAGGGGGTAAAGTAGAGGAGT 58.548 50.000 0.00 0.00 0.00 3.85
315 316 3.117552 AGGGGGTAAAGTAGAGGAGTG 57.882 52.381 0.00 0.00 0.00 3.51
316 317 2.658489 AGGGGGTAAAGTAGAGGAGTGA 59.342 50.000 0.00 0.00 0.00 3.41
317 318 3.078612 AGGGGGTAAAGTAGAGGAGTGAA 59.921 47.826 0.00 0.00 0.00 3.18
318 319 3.842436 GGGGGTAAAGTAGAGGAGTGAAA 59.158 47.826 0.00 0.00 0.00 2.69
319 320 4.081031 GGGGGTAAAGTAGAGGAGTGAAAG 60.081 50.000 0.00 0.00 0.00 2.62
320 321 4.776308 GGGGTAAAGTAGAGGAGTGAAAGA 59.224 45.833 0.00 0.00 0.00 2.52
321 322 5.247792 GGGGTAAAGTAGAGGAGTGAAAGAA 59.752 44.000 0.00 0.00 0.00 2.52
322 323 6.239800 GGGGTAAAGTAGAGGAGTGAAAGAAA 60.240 42.308 0.00 0.00 0.00 2.52
323 324 7.222161 GGGTAAAGTAGAGGAGTGAAAGAAAA 58.778 38.462 0.00 0.00 0.00 2.29
324 325 7.883833 GGGTAAAGTAGAGGAGTGAAAGAAAAT 59.116 37.037 0.00 0.00 0.00 1.82
325 326 8.722394 GGTAAAGTAGAGGAGTGAAAGAAAATG 58.278 37.037 0.00 0.00 0.00 2.32
326 327 9.490379 GTAAAGTAGAGGAGTGAAAGAAAATGA 57.510 33.333 0.00 0.00 0.00 2.57
327 328 8.614469 AAAGTAGAGGAGTGAAAGAAAATGAG 57.386 34.615 0.00 0.00 0.00 2.90
328 329 7.546250 AGTAGAGGAGTGAAAGAAAATGAGA 57.454 36.000 0.00 0.00 0.00 3.27
329 330 8.144862 AGTAGAGGAGTGAAAGAAAATGAGAT 57.855 34.615 0.00 0.00 0.00 2.75
330 331 8.257306 AGTAGAGGAGTGAAAGAAAATGAGATC 58.743 37.037 0.00 0.00 0.00 2.75
331 332 6.105333 AGAGGAGTGAAAGAAAATGAGATCG 58.895 40.000 0.00 0.00 0.00 3.69
332 333 5.181748 AGGAGTGAAAGAAAATGAGATCGG 58.818 41.667 0.00 0.00 0.00 4.18
333 334 4.333926 GGAGTGAAAGAAAATGAGATCGGG 59.666 45.833 0.00 0.00 0.00 5.14
334 335 5.165961 AGTGAAAGAAAATGAGATCGGGA 57.834 39.130 0.00 0.00 0.00 5.14
335 336 5.749462 AGTGAAAGAAAATGAGATCGGGAT 58.251 37.500 0.00 0.00 0.00 3.85
336 337 5.587844 AGTGAAAGAAAATGAGATCGGGATG 59.412 40.000 0.00 0.00 0.00 3.51
337 338 4.883585 TGAAAGAAAATGAGATCGGGATGG 59.116 41.667 0.00 0.00 0.00 3.51
338 339 2.856222 AGAAAATGAGATCGGGATGGC 58.144 47.619 0.00 0.00 0.00 4.40
339 340 1.532868 GAAAATGAGATCGGGATGGCG 59.467 52.381 0.00 0.00 0.00 5.69
340 341 0.250467 AAATGAGATCGGGATGGCGG 60.250 55.000 0.00 0.00 0.00 6.13
341 342 1.121407 AATGAGATCGGGATGGCGGA 61.121 55.000 0.00 0.00 0.00 5.54
342 343 0.906756 ATGAGATCGGGATGGCGGAT 60.907 55.000 0.00 0.00 0.00 4.18
343 344 1.121407 TGAGATCGGGATGGCGGATT 61.121 55.000 0.00 0.00 0.00 3.01
344 345 0.035458 GAGATCGGGATGGCGGATTT 59.965 55.000 0.00 0.00 0.00 2.17
345 346 1.275291 GAGATCGGGATGGCGGATTTA 59.725 52.381 0.00 0.00 0.00 1.40
346 347 1.697432 AGATCGGGATGGCGGATTTAA 59.303 47.619 0.00 0.00 0.00 1.52
347 348 2.305927 AGATCGGGATGGCGGATTTAAT 59.694 45.455 0.00 0.00 0.00 1.40
348 349 1.890876 TCGGGATGGCGGATTTAATG 58.109 50.000 0.00 0.00 0.00 1.90
349 350 0.881118 CGGGATGGCGGATTTAATGG 59.119 55.000 0.00 0.00 0.00 3.16
350 351 1.544537 CGGGATGGCGGATTTAATGGA 60.545 52.381 0.00 0.00 0.00 3.41
351 352 1.886542 GGGATGGCGGATTTAATGGAC 59.113 52.381 0.00 0.00 0.00 4.02
352 353 1.886542 GGATGGCGGATTTAATGGACC 59.113 52.381 0.00 0.00 0.00 4.46
353 354 2.489073 GGATGGCGGATTTAATGGACCT 60.489 50.000 0.00 0.00 0.00 3.85
354 355 2.051334 TGGCGGATTTAATGGACCTG 57.949 50.000 0.00 0.00 0.00 4.00
355 356 1.318576 GGCGGATTTAATGGACCTGG 58.681 55.000 0.00 0.00 0.00 4.45
356 357 1.409661 GGCGGATTTAATGGACCTGGT 60.410 52.381 0.00 0.00 0.00 4.00
357 358 1.676006 GCGGATTTAATGGACCTGGTG 59.324 52.381 2.82 0.00 0.00 4.17
358 359 2.944094 GCGGATTTAATGGACCTGGTGT 60.944 50.000 2.82 0.00 0.00 4.16
359 360 2.682856 CGGATTTAATGGACCTGGTGTG 59.317 50.000 2.82 0.00 0.00 3.82
360 361 3.697166 GGATTTAATGGACCTGGTGTGT 58.303 45.455 2.82 0.00 0.00 3.72
361 362 3.694566 GGATTTAATGGACCTGGTGTGTC 59.305 47.826 2.82 0.00 0.00 3.67
362 363 2.465860 TTAATGGACCTGGTGTGTCG 57.534 50.000 2.82 0.00 33.46 4.35
363 364 0.611200 TAATGGACCTGGTGTGTCGG 59.389 55.000 2.82 0.00 33.46 4.79
364 365 2.124507 AATGGACCTGGTGTGTCGGG 62.125 60.000 2.82 0.00 39.08 5.14
366 367 2.814835 GGACCTGGTGTGTCGGGTT 61.815 63.158 2.82 0.00 45.75 4.11
367 368 1.301479 GACCTGGTGTGTCGGGTTC 60.301 63.158 2.82 0.00 45.75 3.62
368 369 2.032071 CCTGGTGTGTCGGGTTCC 59.968 66.667 0.00 0.00 0.00 3.62
369 370 2.813726 CCTGGTGTGTCGGGTTCCA 61.814 63.158 0.00 0.00 0.00 3.53
370 371 1.147376 CTGGTGTGTCGGGTTCCAA 59.853 57.895 0.00 0.00 0.00 3.53
371 372 1.153127 TGGTGTGTCGGGTTCCAAC 60.153 57.895 0.00 0.00 0.00 3.77
372 373 1.153127 GGTGTGTCGGGTTCCAACA 60.153 57.895 0.00 0.00 0.00 3.33
373 374 0.536460 GGTGTGTCGGGTTCCAACAT 60.536 55.000 0.00 0.00 0.00 2.71
374 375 0.591170 GTGTGTCGGGTTCCAACATG 59.409 55.000 0.00 0.00 0.00 3.21
375 376 0.536233 TGTGTCGGGTTCCAACATGG 60.536 55.000 0.00 0.00 39.43 3.66
376 377 1.602323 TGTCGGGTTCCAACATGGC 60.602 57.895 0.00 0.00 37.47 4.40
377 378 1.303317 GTCGGGTTCCAACATGGCT 60.303 57.895 0.00 0.00 37.47 4.75
378 379 1.303236 TCGGGTTCCAACATGGCTG 60.303 57.895 0.00 0.00 37.47 4.85
379 380 1.303236 CGGGTTCCAACATGGCTGA 60.303 57.895 0.00 0.00 37.47 4.26
380 381 0.680921 CGGGTTCCAACATGGCTGAT 60.681 55.000 0.00 0.00 37.47 2.90
381 382 0.819582 GGGTTCCAACATGGCTGATG 59.180 55.000 0.00 0.00 37.47 3.07
383 384 1.474077 GGTTCCAACATGGCTGATGTC 59.526 52.381 0.00 0.00 45.12 3.06
384 385 1.474077 GTTCCAACATGGCTGATGTCC 59.526 52.381 0.00 0.00 45.12 4.02
385 386 0.392863 TCCAACATGGCTGATGTCCG 60.393 55.000 0.00 0.00 45.12 4.79
386 387 1.378882 CCAACATGGCTGATGTCCGG 61.379 60.000 0.00 0.00 45.12 5.14
387 388 0.392863 CAACATGGCTGATGTCCGGA 60.393 55.000 0.00 0.00 45.12 5.14
388 389 0.392998 AACATGGCTGATGTCCGGAC 60.393 55.000 28.17 28.17 45.12 4.79
389 390 1.267574 ACATGGCTGATGTCCGGACT 61.268 55.000 33.39 19.82 41.91 3.85
390 391 0.531532 CATGGCTGATGTCCGGACTC 60.532 60.000 33.39 26.11 0.00 3.36
391 392 2.021068 ATGGCTGATGTCCGGACTCG 62.021 60.000 33.39 21.88 0.00 4.18
402 403 4.754667 GGACTCGGTCCCGCAACC 62.755 72.222 10.92 0.41 46.19 3.77
403 404 3.998672 GACTCGGTCCCGCAACCA 61.999 66.667 0.00 0.00 39.43 3.67
404 405 3.310860 GACTCGGTCCCGCAACCAT 62.311 63.158 0.00 0.00 39.43 3.55
405 406 2.511600 CTCGGTCCCGCAACCATC 60.512 66.667 0.00 0.00 39.43 3.51
406 407 4.090588 TCGGTCCCGCAACCATCC 62.091 66.667 0.00 0.00 39.43 3.51
408 409 4.815108 GGTCCCGCAACCATCCCC 62.815 72.222 0.00 0.00 39.27 4.81
409 410 4.815108 GTCCCGCAACCATCCCCC 62.815 72.222 0.00 0.00 0.00 5.40
426 427 2.017049 CCCCCTTGTCTCTAATTTGCG 58.983 52.381 0.00 0.00 0.00 4.85
427 428 2.355716 CCCCCTTGTCTCTAATTTGCGA 60.356 50.000 0.00 0.00 0.00 5.10
428 429 2.939103 CCCCTTGTCTCTAATTTGCGAG 59.061 50.000 0.00 0.00 0.00 5.03
429 430 3.369471 CCCCTTGTCTCTAATTTGCGAGA 60.369 47.826 0.00 0.00 34.12 4.04
430 431 3.868077 CCCTTGTCTCTAATTTGCGAGAG 59.132 47.826 0.00 0.00 40.56 3.20
431 432 4.382040 CCCTTGTCTCTAATTTGCGAGAGA 60.382 45.833 2.16 2.16 44.67 3.10
437 438 4.627467 TCTCTAATTTGCGAGAGAAAGTGC 59.373 41.667 3.62 0.00 44.07 4.40
438 439 2.601481 AATTTGCGAGAGAAAGTGCG 57.399 45.000 0.00 0.00 0.00 5.34
439 440 1.512926 ATTTGCGAGAGAAAGTGCGT 58.487 45.000 0.00 0.00 0.00 5.24
440 441 0.859232 TTTGCGAGAGAAAGTGCGTC 59.141 50.000 0.00 0.00 0.00 5.19
441 442 0.032130 TTGCGAGAGAAAGTGCGTCT 59.968 50.000 0.00 0.00 0.00 4.18
442 443 0.664466 TGCGAGAGAAAGTGCGTCTG 60.664 55.000 0.00 0.00 0.00 3.51
443 444 1.347817 GCGAGAGAAAGTGCGTCTGG 61.348 60.000 0.00 0.00 0.00 3.86
444 445 0.241213 CGAGAGAAAGTGCGTCTGGA 59.759 55.000 0.00 0.00 0.00 3.86
445 446 1.704070 GAGAGAAAGTGCGTCTGGAC 58.296 55.000 0.00 0.00 36.56 4.02
446 447 0.318762 AGAGAAAGTGCGTCTGGACC 59.681 55.000 0.00 0.00 37.08 4.46
447 448 1.006102 AGAAAGTGCGTCTGGACCG 60.006 57.895 0.00 0.00 37.08 4.79
464 465 4.251760 GCCGAGCGGAGATACATG 57.748 61.111 13.94 0.00 37.50 3.21
465 466 2.024319 GCCGAGCGGAGATACATGC 61.024 63.158 13.94 0.00 37.50 4.06
466 467 1.373497 CCGAGCGGAGATACATGCC 60.373 63.158 2.00 0.00 37.50 4.40
467 468 1.373497 CGAGCGGAGATACATGCCC 60.373 63.158 0.00 0.00 0.00 5.36
468 469 1.373497 GAGCGGAGATACATGCCCG 60.373 63.158 0.00 0.00 44.34 6.13
470 471 2.734723 CGGAGATACATGCCCGCG 60.735 66.667 0.00 0.00 35.29 6.46
471 472 2.421739 GGAGATACATGCCCGCGT 59.578 61.111 4.92 0.00 0.00 6.01
472 473 1.663739 GGAGATACATGCCCGCGTA 59.336 57.895 4.92 0.00 0.00 4.42
473 474 0.388649 GGAGATACATGCCCGCGTAG 60.389 60.000 4.92 0.00 0.00 3.51
474 475 0.314302 GAGATACATGCCCGCGTAGT 59.686 55.000 4.92 0.00 0.00 2.73
475 476 1.538512 GAGATACATGCCCGCGTAGTA 59.461 52.381 4.92 0.46 0.00 1.82
476 477 2.163815 GAGATACATGCCCGCGTAGTAT 59.836 50.000 4.92 5.65 0.00 2.12
477 478 2.094700 AGATACATGCCCGCGTAGTATG 60.095 50.000 18.39 18.39 0.00 2.39
478 479 1.320507 TACATGCCCGCGTAGTATGA 58.679 50.000 24.15 10.31 0.00 2.15
479 480 0.679505 ACATGCCCGCGTAGTATGAT 59.320 50.000 24.15 10.73 0.00 2.45
480 481 1.070134 ACATGCCCGCGTAGTATGATT 59.930 47.619 24.15 6.61 0.00 2.57
481 482 2.143122 CATGCCCGCGTAGTATGATTT 58.857 47.619 16.05 0.00 0.00 2.17
482 483 1.860676 TGCCCGCGTAGTATGATTTC 58.139 50.000 4.92 0.00 0.00 2.17
483 484 1.145803 GCCCGCGTAGTATGATTTCC 58.854 55.000 4.92 0.00 0.00 3.13
484 485 1.415374 CCCGCGTAGTATGATTTCCG 58.585 55.000 4.92 0.00 0.00 4.30
485 486 1.001048 CCCGCGTAGTATGATTTCCGA 60.001 52.381 4.92 0.00 0.00 4.55
486 487 2.352421 CCCGCGTAGTATGATTTCCGAT 60.352 50.000 4.92 0.00 0.00 4.18
487 488 2.661675 CCGCGTAGTATGATTTCCGATG 59.338 50.000 4.92 0.00 0.00 3.84
488 489 3.305964 CGCGTAGTATGATTTCCGATGT 58.694 45.455 0.00 0.00 0.00 3.06
489 490 3.361053 CGCGTAGTATGATTTCCGATGTC 59.639 47.826 0.00 0.00 0.00 3.06
490 491 3.673809 GCGTAGTATGATTTCCGATGTCC 59.326 47.826 0.00 0.00 0.00 4.02
491 492 3.912563 CGTAGTATGATTTCCGATGTCCG 59.087 47.826 0.00 0.00 38.18 4.79
502 503 2.579207 CGATGTCCGGACAACATAGT 57.421 50.000 39.04 23.04 45.41 2.12
503 504 2.193447 CGATGTCCGGACAACATAGTG 58.807 52.381 39.04 19.86 45.41 2.74
504 505 1.933853 GATGTCCGGACAACATAGTGC 59.066 52.381 39.04 17.26 45.41 4.40
513 514 5.083136 GGACAACATAGTGCGAATGTATG 57.917 43.478 0.00 0.00 36.56 2.39
514 515 4.518217 GACAACATAGTGCGAATGTATGC 58.482 43.478 0.00 0.00 36.56 3.14
515 516 3.938334 ACAACATAGTGCGAATGTATGCA 59.062 39.130 0.00 0.00 36.56 3.96
516 517 4.034394 ACAACATAGTGCGAATGTATGCAG 59.966 41.667 0.00 0.00 42.68 4.41
517 518 3.133691 ACATAGTGCGAATGTATGCAGG 58.866 45.455 0.00 0.00 42.68 4.85
518 519 1.581934 TAGTGCGAATGTATGCAGGC 58.418 50.000 0.00 0.00 42.68 4.85
519 520 1.010797 GTGCGAATGTATGCAGGCG 60.011 57.895 0.00 4.18 42.68 5.52
520 521 2.179547 TGCGAATGTATGCAGGCGG 61.180 57.895 9.41 0.00 35.90 6.13
521 522 2.180204 GCGAATGTATGCAGGCGGT 61.180 57.895 9.41 0.00 0.00 5.68
522 523 1.714899 GCGAATGTATGCAGGCGGTT 61.715 55.000 9.41 0.00 0.00 4.44
523 524 0.732571 CGAATGTATGCAGGCGGTTT 59.267 50.000 0.00 0.00 0.00 3.27
524 525 1.531677 CGAATGTATGCAGGCGGTTTG 60.532 52.381 0.00 0.00 0.00 2.93
525 526 1.472480 GAATGTATGCAGGCGGTTTGT 59.528 47.619 0.00 0.00 0.00 2.83
526 527 0.810648 ATGTATGCAGGCGGTTTGTG 59.189 50.000 0.00 0.00 0.00 3.33
527 528 1.240641 TGTATGCAGGCGGTTTGTGG 61.241 55.000 0.00 0.00 0.00 4.17
528 529 1.677300 TATGCAGGCGGTTTGTGGG 60.677 57.895 0.00 0.00 0.00 4.61
529 530 2.419011 TATGCAGGCGGTTTGTGGGT 62.419 55.000 0.00 0.00 0.00 4.51
530 531 3.670377 GCAGGCGGTTTGTGGGTC 61.670 66.667 0.00 0.00 0.00 4.46
531 532 3.353836 CAGGCGGTTTGTGGGTCG 61.354 66.667 0.00 0.00 0.00 4.79
532 533 4.636435 AGGCGGTTTGTGGGTCGG 62.636 66.667 0.00 0.00 0.00 4.79
536 537 2.903350 GGTTTGTGGGTCGGCGTT 60.903 61.111 6.85 0.00 0.00 4.84
537 538 2.330041 GTTTGTGGGTCGGCGTTG 59.670 61.111 6.85 0.00 0.00 4.10
538 539 2.902846 TTTGTGGGTCGGCGTTGG 60.903 61.111 6.85 0.00 0.00 3.77
539 540 3.402095 TTTGTGGGTCGGCGTTGGA 62.402 57.895 6.85 0.00 0.00 3.53
540 541 3.818121 TTGTGGGTCGGCGTTGGAG 62.818 63.158 6.85 0.00 0.00 3.86
541 542 3.998672 GTGGGTCGGCGTTGGAGA 61.999 66.667 6.85 0.00 0.00 3.71
542 543 3.000819 TGGGTCGGCGTTGGAGAT 61.001 61.111 6.85 0.00 0.00 2.75
543 544 2.511600 GGGTCGGCGTTGGAGATG 60.512 66.667 6.85 0.00 0.00 2.90
544 545 3.195698 GGTCGGCGTTGGAGATGC 61.196 66.667 6.85 0.00 39.65 3.91
549 550 4.954933 GCGTTGGAGATGCCCTTA 57.045 55.556 0.00 0.00 34.03 2.69
550 551 2.394604 GCGTTGGAGATGCCCTTAC 58.605 57.895 0.00 0.00 34.03 2.34
551 552 1.429148 GCGTTGGAGATGCCCTTACG 61.429 60.000 0.00 0.00 37.71 3.18
552 553 1.429148 CGTTGGAGATGCCCTTACGC 61.429 60.000 0.00 0.00 34.97 4.42
553 554 0.107654 GTTGGAGATGCCCTTACGCT 60.108 55.000 0.00 0.00 34.97 5.07
554 555 1.138266 GTTGGAGATGCCCTTACGCTA 59.862 52.381 0.00 0.00 34.97 4.26
555 556 1.717032 TGGAGATGCCCTTACGCTAT 58.283 50.000 0.00 0.00 34.97 2.97
556 557 1.344438 TGGAGATGCCCTTACGCTATG 59.656 52.381 0.00 0.00 34.97 2.23
557 558 1.338200 GGAGATGCCCTTACGCTATGG 60.338 57.143 0.00 0.00 0.00 2.74
558 559 1.618837 GAGATGCCCTTACGCTATGGA 59.381 52.381 0.00 0.00 0.00 3.41
559 560 2.037251 GAGATGCCCTTACGCTATGGAA 59.963 50.000 0.00 0.00 0.00 3.53
560 561 2.037772 AGATGCCCTTACGCTATGGAAG 59.962 50.000 0.00 0.00 0.00 3.46
573 574 4.412796 CTATGGAAGCTGGACAAGATCA 57.587 45.455 0.00 0.00 0.00 2.92
574 575 2.479566 TGGAAGCTGGACAAGATCAC 57.520 50.000 0.00 0.00 0.00 3.06
575 576 1.980765 TGGAAGCTGGACAAGATCACT 59.019 47.619 0.00 0.00 0.00 3.41
576 577 2.027745 TGGAAGCTGGACAAGATCACTC 60.028 50.000 0.00 0.00 0.00 3.51
577 578 2.266554 GAAGCTGGACAAGATCACTCG 58.733 52.381 0.00 0.00 0.00 4.18
578 579 1.261480 AGCTGGACAAGATCACTCGT 58.739 50.000 0.00 0.00 0.00 4.18
579 580 2.447443 AGCTGGACAAGATCACTCGTA 58.553 47.619 0.00 0.00 0.00 3.43
580 581 3.027412 AGCTGGACAAGATCACTCGTAT 58.973 45.455 0.00 0.00 0.00 3.06
581 582 3.119291 GCTGGACAAGATCACTCGTATG 58.881 50.000 0.00 0.00 0.00 2.39
582 583 3.429547 GCTGGACAAGATCACTCGTATGT 60.430 47.826 0.00 0.00 0.00 2.29
583 584 4.748892 CTGGACAAGATCACTCGTATGTT 58.251 43.478 0.00 0.00 0.00 2.71
584 585 4.744570 TGGACAAGATCACTCGTATGTTC 58.255 43.478 0.00 0.00 0.00 3.18
585 586 4.219725 TGGACAAGATCACTCGTATGTTCA 59.780 41.667 0.00 0.00 0.00 3.18
586 587 5.168569 GGACAAGATCACTCGTATGTTCAA 58.831 41.667 0.00 0.00 0.00 2.69
587 588 5.289675 GGACAAGATCACTCGTATGTTCAAG 59.710 44.000 0.00 0.00 0.00 3.02
588 589 5.784177 ACAAGATCACTCGTATGTTCAAGT 58.216 37.500 0.00 0.00 0.00 3.16
589 590 6.223852 ACAAGATCACTCGTATGTTCAAGTT 58.776 36.000 0.00 0.00 0.00 2.66
590 591 6.366332 ACAAGATCACTCGTATGTTCAAGTTC 59.634 38.462 0.00 0.00 0.00 3.01
591 592 6.025749 AGATCACTCGTATGTTCAAGTTCA 57.974 37.500 0.00 0.00 0.00 3.18
592 593 6.455647 AGATCACTCGTATGTTCAAGTTCAA 58.544 36.000 0.00 0.00 0.00 2.69
593 594 5.900339 TCACTCGTATGTTCAAGTTCAAC 57.100 39.130 0.00 0.00 0.00 3.18
594 595 5.353111 TCACTCGTATGTTCAAGTTCAACA 58.647 37.500 0.00 0.00 38.12 3.33
595 596 5.233476 TCACTCGTATGTTCAAGTTCAACAC 59.767 40.000 0.00 0.00 36.59 3.32
596 597 4.510340 ACTCGTATGTTCAAGTTCAACACC 59.490 41.667 0.00 0.00 36.59 4.16
597 598 3.810941 TCGTATGTTCAAGTTCAACACCC 59.189 43.478 0.00 0.00 36.59 4.61
598 599 3.562141 CGTATGTTCAAGTTCAACACCCA 59.438 43.478 0.00 0.00 36.59 4.51
599 600 4.319477 CGTATGTTCAAGTTCAACACCCAG 60.319 45.833 0.00 0.00 36.59 4.45
600 601 3.358111 TGTTCAAGTTCAACACCCAGA 57.642 42.857 0.00 0.00 0.00 3.86
601 602 3.691575 TGTTCAAGTTCAACACCCAGAA 58.308 40.909 0.00 0.00 0.00 3.02
602 603 3.442273 TGTTCAAGTTCAACACCCAGAAC 59.558 43.478 0.00 0.00 43.33 3.01
608 609 4.450082 GTTCAACACCCAGAACTTTGTT 57.550 40.909 0.00 0.00 40.63 2.83
609 610 5.570234 GTTCAACACCCAGAACTTTGTTA 57.430 39.130 0.00 0.00 40.63 2.41
610 611 6.144078 GTTCAACACCCAGAACTTTGTTAT 57.856 37.500 0.00 0.00 40.63 1.89
611 612 6.569780 GTTCAACACCCAGAACTTTGTTATT 58.430 36.000 0.00 0.00 40.63 1.40
612 613 6.783708 TCAACACCCAGAACTTTGTTATTT 57.216 33.333 0.00 0.00 31.00 1.40
613 614 6.568869 TCAACACCCAGAACTTTGTTATTTG 58.431 36.000 0.00 0.00 31.00 2.32
614 615 4.944048 ACACCCAGAACTTTGTTATTTGC 58.056 39.130 0.00 0.00 0.00 3.68
615 616 4.649218 ACACCCAGAACTTTGTTATTTGCT 59.351 37.500 0.00 0.00 0.00 3.91
616 617 5.830991 ACACCCAGAACTTTGTTATTTGCTA 59.169 36.000 0.00 0.00 0.00 3.49
617 618 6.016276 ACACCCAGAACTTTGTTATTTGCTAG 60.016 38.462 0.00 0.00 0.00 3.42
618 619 6.206634 CACCCAGAACTTTGTTATTTGCTAGA 59.793 38.462 0.00 0.00 0.00 2.43
619 620 6.431234 ACCCAGAACTTTGTTATTTGCTAGAG 59.569 38.462 0.00 0.00 0.00 2.43
620 621 6.655003 CCCAGAACTTTGTTATTTGCTAGAGA 59.345 38.462 0.00 0.00 0.00 3.10
621 622 7.337942 CCCAGAACTTTGTTATTTGCTAGAGAT 59.662 37.037 0.00 0.00 0.00 2.75
622 623 8.180267 CCAGAACTTTGTTATTTGCTAGAGATG 58.820 37.037 0.00 0.00 0.00 2.90
623 624 7.695618 CAGAACTTTGTTATTTGCTAGAGATGC 59.304 37.037 0.00 0.00 0.00 3.91
624 625 7.609532 AGAACTTTGTTATTTGCTAGAGATGCT 59.390 33.333 0.00 0.00 0.00 3.79
625 626 7.313951 ACTTTGTTATTTGCTAGAGATGCTC 57.686 36.000 0.00 0.00 0.00 4.26
626 627 7.108847 ACTTTGTTATTTGCTAGAGATGCTCT 58.891 34.615 0.00 2.22 43.83 4.09
627 628 8.260818 ACTTTGTTATTTGCTAGAGATGCTCTA 58.739 33.333 0.00 4.30 41.50 2.43
628 629 9.102757 CTTTGTTATTTGCTAGAGATGCTCTAA 57.897 33.333 5.75 0.00 41.74 2.10
629 630 9.448438 TTTGTTATTTGCTAGAGATGCTCTAAA 57.552 29.630 5.75 0.68 41.74 1.85
630 631 8.425577 TGTTATTTGCTAGAGATGCTCTAAAC 57.574 34.615 5.75 6.58 41.74 2.01
631 632 8.040727 TGTTATTTGCTAGAGATGCTCTAAACA 58.959 33.333 10.65 10.65 41.74 2.83
632 633 6.917217 ATTTGCTAGAGATGCTCTAAACAC 57.083 37.500 5.75 0.00 41.74 3.32
633 634 5.405935 TTGCTAGAGATGCTCTAAACACA 57.594 39.130 5.75 0.62 41.74 3.72
634 635 4.748892 TGCTAGAGATGCTCTAAACACAC 58.251 43.478 5.75 0.00 41.74 3.82
635 636 4.464244 TGCTAGAGATGCTCTAAACACACT 59.536 41.667 5.75 0.00 41.74 3.55
636 637 5.040635 GCTAGAGATGCTCTAAACACACTC 58.959 45.833 5.75 0.00 41.74 3.51
637 638 5.393569 GCTAGAGATGCTCTAAACACACTCA 60.394 44.000 5.75 0.00 41.74 3.41
638 639 5.674052 AGAGATGCTCTAAACACACTCAT 57.326 39.130 0.00 0.00 39.28 2.90
639 640 5.659463 AGAGATGCTCTAAACACACTCATC 58.341 41.667 0.00 0.00 39.28 2.92
640 641 4.764172 AGATGCTCTAAACACACTCATCC 58.236 43.478 0.00 0.00 31.80 3.51
641 642 3.334583 TGCTCTAAACACACTCATCCC 57.665 47.619 0.00 0.00 0.00 3.85
642 643 2.906389 TGCTCTAAACACACTCATCCCT 59.094 45.455 0.00 0.00 0.00 4.20
643 644 3.327757 TGCTCTAAACACACTCATCCCTT 59.672 43.478 0.00 0.00 0.00 3.95
644 645 4.202461 TGCTCTAAACACACTCATCCCTTT 60.202 41.667 0.00 0.00 0.00 3.11
645 646 4.154918 GCTCTAAACACACTCATCCCTTTG 59.845 45.833 0.00 0.00 0.00 2.77
646 647 5.304686 TCTAAACACACTCATCCCTTTGT 57.695 39.130 0.00 0.00 0.00 2.83
647 648 5.690865 TCTAAACACACTCATCCCTTTGTT 58.309 37.500 0.00 0.00 0.00 2.83
648 649 4.918810 AAACACACTCATCCCTTTGTTC 57.081 40.909 0.00 0.00 0.00 3.18
649 650 3.576078 ACACACTCATCCCTTTGTTCA 57.424 42.857 0.00 0.00 0.00 3.18
650 651 3.480470 ACACACTCATCCCTTTGTTCAG 58.520 45.455 0.00 0.00 0.00 3.02
651 652 3.136443 ACACACTCATCCCTTTGTTCAGA 59.864 43.478 0.00 0.00 0.00 3.27
652 653 4.202503 ACACACTCATCCCTTTGTTCAGAT 60.203 41.667 0.00 0.00 0.00 2.90
653 654 5.013079 ACACACTCATCCCTTTGTTCAGATA 59.987 40.000 0.00 0.00 0.00 1.98
654 655 5.939883 CACACTCATCCCTTTGTTCAGATAA 59.060 40.000 0.00 0.00 0.00 1.75
655 656 6.430925 CACACTCATCCCTTTGTTCAGATAAA 59.569 38.462 0.00 0.00 0.00 1.40
656 657 6.431234 ACACTCATCCCTTTGTTCAGATAAAC 59.569 38.462 0.00 0.00 0.00 2.01
657 658 6.430925 CACTCATCCCTTTGTTCAGATAAACA 59.569 38.462 0.00 0.00 37.37 2.83
686 687 3.685139 AGACAAGAGAAAAGATGCGGA 57.315 42.857 0.00 0.00 0.00 5.54
704 705 3.795150 GCGGAAAAAGACAACTTCATGCA 60.795 43.478 0.00 0.00 35.05 3.96
727 728 1.068474 GTGCATGCGTACTCTTTCGT 58.932 50.000 14.09 0.00 0.00 3.85
751 752 3.928992 GTGATGTGTGTGATCGAGTGAAT 59.071 43.478 0.00 0.00 0.00 2.57
794 799 4.855715 TCGAGTGAAGTTGATGAAGAGT 57.144 40.909 0.00 0.00 0.00 3.24
818 1063 4.779993 AGTTGGGAGAAGAAGTCAAACT 57.220 40.909 0.00 0.00 0.00 2.66
819 1064 4.455606 AGTTGGGAGAAGAAGTCAAACTG 58.544 43.478 0.00 0.00 0.00 3.16
820 1065 4.080299 AGTTGGGAGAAGAAGTCAAACTGT 60.080 41.667 0.00 0.00 0.00 3.55
821 1066 4.073293 TGGGAGAAGAAGTCAAACTGTC 57.927 45.455 0.00 0.00 0.00 3.51
822 1067 3.454447 TGGGAGAAGAAGTCAAACTGTCA 59.546 43.478 0.00 0.00 0.00 3.58
823 1068 4.061596 GGGAGAAGAAGTCAAACTGTCAG 58.938 47.826 0.00 0.00 0.00 3.51
824 1069 4.202264 GGGAGAAGAAGTCAAACTGTCAGA 60.202 45.833 6.91 0.00 0.00 3.27
825 1070 4.747605 GGAGAAGAAGTCAAACTGTCAGAC 59.252 45.833 6.91 0.00 0.00 3.51
826 1071 4.698575 AGAAGAAGTCAAACTGTCAGACC 58.301 43.478 6.91 0.00 32.82 3.85
845 1090 5.420104 CAGACCCAAAATCAGCCTAAAGAAT 59.580 40.000 0.00 0.00 0.00 2.40
884 1129 0.594602 GAAGCAGCACAGTTCATGCA 59.405 50.000 0.00 0.00 45.92 3.96
908 1153 3.830178 GCCTACTAAAAAGCCCAAAAGGA 59.170 43.478 0.00 0.00 38.24 3.36
919 1164 3.774766 AGCCCAAAAGGACCAAAATATCC 59.225 43.478 0.00 0.00 38.24 2.59
1031 1278 1.477700 AGCAAGCAGAGTAGAGCAGAG 59.522 52.381 0.00 0.00 0.00 3.35
1037 1284 1.204231 CAGAGTAGAGCAGAGCAGCAA 59.796 52.381 0.00 0.00 36.85 3.91
1068 1315 4.928615 CACAGAGAGAAAGTAGAAAGGCAG 59.071 45.833 0.00 0.00 0.00 4.85
1215 1510 0.248458 GCCGGTGTTCAAAGTGTGTG 60.248 55.000 1.90 0.00 0.00 3.82
1399 1694 2.412977 CGATCTAGTTATGAGGGCGACG 60.413 54.545 0.00 0.00 0.00 5.12
1446 1741 8.030692 TGGATAAAACTGCAAATCTGATGAAAG 58.969 33.333 0.00 0.00 0.00 2.62
1478 1773 2.232452 CCAGATGTCAGAGTTTCGACCT 59.768 50.000 0.00 0.00 0.00 3.85
1598 1893 8.118607 GGACTTAAAAGTAACTGTGTGTACAAC 58.881 37.037 0.00 0.00 39.88 3.32
1604 1899 6.956202 AGTAACTGTGTGTACAACTCTACT 57.044 37.500 0.00 0.00 36.14 2.57
1607 1902 7.935755 AGTAACTGTGTGTACAACTCTACTAGA 59.064 37.037 0.00 0.00 36.14 2.43
1647 1946 2.871022 TCTACTAGCTAGCACTACGCAC 59.129 50.000 20.91 0.00 46.13 5.34
1649 1948 0.656259 CTAGCTAGCACTACGCACGA 59.344 55.000 18.83 0.00 46.13 4.35
1667 1966 2.159572 ACGATTCCGGAAATTTGCTTCG 60.160 45.455 24.86 24.86 40.78 3.79
1747 2054 0.740868 CATCCGACAACGCATGGACT 60.741 55.000 0.00 0.00 34.48 3.85
1788 2095 5.437191 AGGGTGAAAGTGGTTAGGATAAG 57.563 43.478 0.00 0.00 0.00 1.73
1792 2099 6.492429 GGGTGAAAGTGGTTAGGATAAGTTTT 59.508 38.462 0.00 0.00 0.00 2.43
1803 2110 5.941948 AGGATAAGTTTTGACTGAAACCG 57.058 39.130 0.00 0.00 39.71 4.44
1813 2120 2.478894 TGACTGAAACCGCTTTCGAATC 59.521 45.455 0.00 0.00 39.01 2.52
1834 2141 9.125906 CGAATCTGTTTTTATAGGATACGGTAG 57.874 37.037 0.00 0.00 46.39 3.18
1868 2175 0.450482 CGCACACAATCCGTTTCGAC 60.450 55.000 0.00 0.00 0.00 4.20
2016 2326 9.953565 AAGTTTCAGGTATTAACTAGCAATACA 57.046 29.630 20.87 6.34 39.55 2.29
2069 2379 0.391597 GTTGGAGGTCAGGAACACGA 59.608 55.000 0.00 0.00 0.00 4.35
2075 2385 3.132289 GGAGGTCAGGAACACGATATTCA 59.868 47.826 0.00 0.00 0.00 2.57
2140 2451 1.438651 GAGTAAGCAACATGTCCGCA 58.561 50.000 19.13 0.63 0.00 5.69
2170 2493 6.974932 TTGATGTCAAATAGAAGAGCACTC 57.025 37.500 0.00 0.00 32.11 3.51
2171 2494 5.423015 TGATGTCAAATAGAAGAGCACTCC 58.577 41.667 0.00 0.00 0.00 3.85
2255 2578 4.058124 GAGCATCAATATGGTTGACGCTA 58.942 43.478 13.73 0.00 46.21 4.26
2267 2590 4.119862 GGTTGACGCTATAATGAAGCTGA 58.880 43.478 0.00 0.00 37.85 4.26
2314 2638 0.819582 CACACCATTCAATGAGGGGC 59.180 55.000 0.00 0.00 0.00 5.80
2400 2725 2.622470 CCATTGGTGTGTGTCAACATGA 59.378 45.455 0.00 0.00 43.77 3.07
2435 2761 6.406692 AGTGTCAACTGGCGATAAGTATAT 57.593 37.500 0.00 0.00 34.48 0.86
2449 2775 9.186323 GCGATAAGTATATGCATCCTACTTATG 57.814 37.037 33.28 27.84 43.54 1.90
2460 2786 7.791029 TGCATCCTACTTATGAAAGTGATACA 58.209 34.615 1.11 0.00 45.63 2.29
2461 2787 8.432013 TGCATCCTACTTATGAAAGTGATACAT 58.568 33.333 1.11 0.00 45.63 2.29
2462 2788 9.929180 GCATCCTACTTATGAAAGTGATACATA 57.071 33.333 1.11 0.00 45.63 2.29
2506 2832 2.989422 ACTGAAATTGTTGCCTACGC 57.011 45.000 0.00 0.00 0.00 4.42
2514 2840 1.080025 GTTGCCTACGCCGAGAGTT 60.080 57.895 0.00 0.00 0.00 3.01
2550 2876 1.072266 ATGCCCACTTGGTTGACCTA 58.928 50.000 1.34 0.00 36.82 3.08
2562 2888 3.460340 TGGTTGACCTAACTTTGAGGGAA 59.540 43.478 1.34 0.00 38.52 3.97
2646 2972 4.937620 ACTTATGTTGTTCACGAGCATGAT 59.062 37.500 0.00 0.00 0.00 2.45
2651 2978 1.733912 TGTTCACGAGCATGATTGAGC 59.266 47.619 4.91 0.00 0.00 4.26
2676 3003 7.175641 GCCATGCACTATCTCTGGTTTTATTAT 59.824 37.037 2.42 0.00 0.00 1.28
2698 3025 6.808321 ATGTGTAGTAGGTAATCCATGTGT 57.192 37.500 0.00 0.00 35.89 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.569162 TGACTTTATCCGCGGATTTTGTAG 59.431 41.667 42.74 30.21 36.17 2.74
1 2 4.505808 TGACTTTATCCGCGGATTTTGTA 58.494 39.130 42.74 24.04 36.17 2.41
2 3 3.340034 TGACTTTATCCGCGGATTTTGT 58.660 40.909 42.74 33.79 36.17 2.83
3 4 4.095610 GTTGACTTTATCCGCGGATTTTG 58.904 43.478 42.74 31.24 36.17 2.44
4 5 3.128068 GGTTGACTTTATCCGCGGATTTT 59.872 43.478 42.74 24.91 36.17 1.82
5 6 2.681344 GGTTGACTTTATCCGCGGATTT 59.319 45.455 42.74 25.69 36.17 2.17
6 7 2.285977 GGTTGACTTTATCCGCGGATT 58.714 47.619 42.74 26.98 36.17 3.01
7 8 1.208535 TGGTTGACTTTATCCGCGGAT 59.791 47.619 39.97 39.97 38.54 4.18
8 9 0.609151 TGGTTGACTTTATCCGCGGA 59.391 50.000 33.12 33.12 0.00 5.54
9 10 0.725117 GTGGTTGACTTTATCCGCGG 59.275 55.000 22.12 22.12 0.00 6.46
10 11 0.368907 CGTGGTTGACTTTATCCGCG 59.631 55.000 0.00 0.00 44.94 6.46
11 12 0.096454 GCGTGGTTGACTTTATCCGC 59.904 55.000 0.00 0.00 0.00 5.54
12 13 1.434555 TGCGTGGTTGACTTTATCCG 58.565 50.000 0.00 0.00 0.00 4.18
13 14 2.030457 CGATGCGTGGTTGACTTTATCC 59.970 50.000 0.00 0.00 0.00 2.59
14 15 2.536928 GCGATGCGTGGTTGACTTTATC 60.537 50.000 0.00 0.00 0.00 1.75
15 16 1.396996 GCGATGCGTGGTTGACTTTAT 59.603 47.619 0.00 0.00 0.00 1.40
16 17 0.793861 GCGATGCGTGGTTGACTTTA 59.206 50.000 0.00 0.00 0.00 1.85
17 18 1.163420 TGCGATGCGTGGTTGACTTT 61.163 50.000 0.00 0.00 0.00 2.66
18 19 1.596752 TGCGATGCGTGGTTGACTT 60.597 52.632 0.00 0.00 0.00 3.01
19 20 2.030412 TGCGATGCGTGGTTGACT 59.970 55.556 0.00 0.00 0.00 3.41
20 21 2.111932 TTGTGCGATGCGTGGTTGAC 62.112 55.000 0.00 0.00 0.00 3.18
21 22 1.889573 TTGTGCGATGCGTGGTTGA 60.890 52.632 0.00 0.00 0.00 3.18
22 23 1.725625 GTTGTGCGATGCGTGGTTG 60.726 57.895 0.00 0.00 0.00 3.77
23 24 1.719725 TTGTTGTGCGATGCGTGGTT 61.720 50.000 0.00 0.00 0.00 3.67
24 25 2.183504 TTGTTGTGCGATGCGTGGT 61.184 52.632 0.00 0.00 0.00 4.16
25 26 1.725625 GTTGTTGTGCGATGCGTGG 60.726 57.895 0.00 0.00 0.00 4.94
26 27 0.722469 GAGTTGTTGTGCGATGCGTG 60.722 55.000 0.00 0.00 0.00 5.34
27 28 1.157257 TGAGTTGTTGTGCGATGCGT 61.157 50.000 0.00 0.00 0.00 5.24
28 29 0.166597 ATGAGTTGTTGTGCGATGCG 59.833 50.000 0.00 0.00 0.00 4.73
29 30 1.466360 GGATGAGTTGTTGTGCGATGC 60.466 52.381 0.00 0.00 0.00 3.91
30 31 2.079158 AGGATGAGTTGTTGTGCGATG 58.921 47.619 0.00 0.00 0.00 3.84
31 32 2.350522 GAGGATGAGTTGTTGTGCGAT 58.649 47.619 0.00 0.00 0.00 4.58
32 33 1.608025 GGAGGATGAGTTGTTGTGCGA 60.608 52.381 0.00 0.00 0.00 5.10
33 34 0.798776 GGAGGATGAGTTGTTGTGCG 59.201 55.000 0.00 0.00 0.00 5.34
34 35 1.896220 TGGAGGATGAGTTGTTGTGC 58.104 50.000 0.00 0.00 0.00 4.57
35 36 2.751259 CCATGGAGGATGAGTTGTTGTG 59.249 50.000 5.56 0.00 41.22 3.33
36 37 2.376518 ACCATGGAGGATGAGTTGTTGT 59.623 45.455 21.47 0.00 41.22 3.32
37 38 3.077484 ACCATGGAGGATGAGTTGTTG 57.923 47.619 21.47 0.00 41.22 3.33
38 39 3.074390 TCAACCATGGAGGATGAGTTGTT 59.926 43.478 21.47 0.00 43.51 2.83
39 40 2.644299 TCAACCATGGAGGATGAGTTGT 59.356 45.455 21.47 0.00 43.51 3.32
40 41 3.354948 TCAACCATGGAGGATGAGTTG 57.645 47.619 21.47 9.94 43.51 3.16
56 57 0.912486 AGGATGGCAGGGTACTCAAC 59.088 55.000 0.00 0.00 0.00 3.18
57 58 1.559682 GAAGGATGGCAGGGTACTCAA 59.440 52.381 0.00 0.00 0.00 3.02
58 59 1.204146 GAAGGATGGCAGGGTACTCA 58.796 55.000 0.00 0.00 0.00 3.41
59 60 0.470341 GGAAGGATGGCAGGGTACTC 59.530 60.000 0.00 0.00 0.00 2.59
60 61 0.044855 AGGAAGGATGGCAGGGTACT 59.955 55.000 0.00 0.00 0.00 2.73
61 62 1.416772 GTAGGAAGGATGGCAGGGTAC 59.583 57.143 0.00 0.00 0.00 3.34
62 63 1.294068 AGTAGGAAGGATGGCAGGGTA 59.706 52.381 0.00 0.00 0.00 3.69
63 64 0.044855 AGTAGGAAGGATGGCAGGGT 59.955 55.000 0.00 0.00 0.00 4.34
64 65 0.761802 GAGTAGGAAGGATGGCAGGG 59.238 60.000 0.00 0.00 0.00 4.45
65 66 1.415659 CAGAGTAGGAAGGATGGCAGG 59.584 57.143 0.00 0.00 0.00 4.85
66 67 2.392662 TCAGAGTAGGAAGGATGGCAG 58.607 52.381 0.00 0.00 0.00 4.85
67 68 2.550277 TCAGAGTAGGAAGGATGGCA 57.450 50.000 0.00 0.00 0.00 4.92
68 69 3.914426 TTTCAGAGTAGGAAGGATGGC 57.086 47.619 0.00 0.00 0.00 4.40
87 88 0.250553 TCGGAGGCCATGTCGTTTTT 60.251 50.000 5.01 0.00 0.00 1.94
88 89 0.250553 TTCGGAGGCCATGTCGTTTT 60.251 50.000 5.01 0.00 0.00 2.43
89 90 0.250553 TTTCGGAGGCCATGTCGTTT 60.251 50.000 5.01 0.00 0.00 3.60
90 91 0.250553 TTTTCGGAGGCCATGTCGTT 60.251 50.000 5.01 0.00 0.00 3.85
91 92 0.035439 ATTTTCGGAGGCCATGTCGT 60.035 50.000 5.01 0.00 0.00 4.34
92 93 1.948104 TATTTTCGGAGGCCATGTCG 58.052 50.000 5.01 2.80 0.00 4.35
93 94 2.033424 GCTTATTTTCGGAGGCCATGTC 59.967 50.000 5.01 0.00 0.00 3.06
94 95 2.024414 GCTTATTTTCGGAGGCCATGT 58.976 47.619 5.01 0.00 0.00 3.21
95 96 2.291741 GAGCTTATTTTCGGAGGCCATG 59.708 50.000 5.01 0.00 0.00 3.66
96 97 2.092429 TGAGCTTATTTTCGGAGGCCAT 60.092 45.455 5.01 0.00 0.00 4.40
97 98 1.280710 TGAGCTTATTTTCGGAGGCCA 59.719 47.619 5.01 0.00 0.00 5.36
98 99 2.038387 TGAGCTTATTTTCGGAGGCC 57.962 50.000 0.00 0.00 0.00 5.19
99 100 2.291741 CCATGAGCTTATTTTCGGAGGC 59.708 50.000 0.00 0.00 0.00 4.70
100 101 2.880890 CCCATGAGCTTATTTTCGGAGG 59.119 50.000 0.00 0.00 0.00 4.30
101 102 2.291741 GCCCATGAGCTTATTTTCGGAG 59.708 50.000 0.00 0.00 0.00 4.63
102 103 2.297701 GCCCATGAGCTTATTTTCGGA 58.702 47.619 0.00 0.00 0.00 4.55
103 104 2.023673 TGCCCATGAGCTTATTTTCGG 58.976 47.619 0.00 0.00 0.00 4.30
104 105 3.996150 ATGCCCATGAGCTTATTTTCG 57.004 42.857 0.00 0.00 0.00 3.46
105 106 5.521372 GTCAAATGCCCATGAGCTTATTTTC 59.479 40.000 0.00 0.00 0.00 2.29
106 107 5.422145 GTCAAATGCCCATGAGCTTATTTT 58.578 37.500 0.00 0.00 0.00 1.82
107 108 4.141869 GGTCAAATGCCCATGAGCTTATTT 60.142 41.667 0.00 0.00 40.11 1.40
108 109 3.385755 GGTCAAATGCCCATGAGCTTATT 59.614 43.478 0.00 0.00 40.11 1.40
109 110 2.961062 GGTCAAATGCCCATGAGCTTAT 59.039 45.455 0.00 0.00 40.11 1.73
110 111 2.378038 GGTCAAATGCCCATGAGCTTA 58.622 47.619 0.00 0.00 40.11 3.09
111 112 1.188863 GGTCAAATGCCCATGAGCTT 58.811 50.000 0.00 0.00 40.11 3.74
112 113 1.033746 CGGTCAAATGCCCATGAGCT 61.034 55.000 0.00 0.00 40.85 4.09
113 114 1.031571 TCGGTCAAATGCCCATGAGC 61.032 55.000 0.00 0.00 39.91 4.26
114 115 1.133025 GTTCGGTCAAATGCCCATGAG 59.867 52.381 0.00 0.00 0.00 2.90
115 116 1.173043 GTTCGGTCAAATGCCCATGA 58.827 50.000 0.00 0.00 0.00 3.07
116 117 0.887247 TGTTCGGTCAAATGCCCATG 59.113 50.000 0.00 0.00 0.00 3.66
117 118 0.887933 GTGTTCGGTCAAATGCCCAT 59.112 50.000 0.00 0.00 0.00 4.00
118 119 1.175983 GGTGTTCGGTCAAATGCCCA 61.176 55.000 0.00 0.00 0.00 5.36
119 120 0.893727 AGGTGTTCGGTCAAATGCCC 60.894 55.000 0.00 0.00 0.00 5.36
120 121 0.240945 CAGGTGTTCGGTCAAATGCC 59.759 55.000 0.00 0.00 0.00 4.40
121 122 0.387239 GCAGGTGTTCGGTCAAATGC 60.387 55.000 0.00 0.00 0.00 3.56
122 123 0.240945 GGCAGGTGTTCGGTCAAATG 59.759 55.000 0.00 0.00 0.00 2.32
123 124 0.179004 TGGCAGGTGTTCGGTCAAAT 60.179 50.000 0.00 0.00 0.00 2.32
124 125 0.817634 CTGGCAGGTGTTCGGTCAAA 60.818 55.000 6.61 0.00 0.00 2.69
125 126 1.227823 CTGGCAGGTGTTCGGTCAA 60.228 57.895 6.61 0.00 0.00 3.18
126 127 2.425592 CTGGCAGGTGTTCGGTCA 59.574 61.111 6.61 0.00 0.00 4.02
127 128 2.358737 CCTGGCAGGTGTTCGGTC 60.359 66.667 25.74 0.00 0.00 4.79
128 129 4.643387 GCCTGGCAGGTGTTCGGT 62.643 66.667 32.80 0.00 37.80 4.69
135 136 3.706373 CCACTACGCCTGGCAGGT 61.706 66.667 32.80 18.04 37.80 4.00
144 145 2.203070 CCATGGAGGCCACTACGC 60.203 66.667 5.56 0.00 35.80 4.42
145 146 1.443407 CTCCATGGAGGCCACTACG 59.557 63.158 31.14 5.66 35.80 3.51
154 155 0.608130 TGTCAACGACCTCCATGGAG 59.392 55.000 31.69 31.69 41.63 3.86
155 156 0.320374 GTGTCAACGACCTCCATGGA 59.680 55.000 15.27 15.27 39.71 3.41
156 157 2.840974 GTGTCAACGACCTCCATGG 58.159 57.895 4.97 4.97 42.93 3.66
167 168 2.092882 GCTCTACCGCCGTGTCAAC 61.093 63.158 0.00 0.00 0.00 3.18
168 169 2.260434 GCTCTACCGCCGTGTCAA 59.740 61.111 0.00 0.00 0.00 3.18
169 170 4.111016 CGCTCTACCGCCGTGTCA 62.111 66.667 0.00 0.00 0.00 3.58
170 171 2.753966 TACGCTCTACCGCCGTGTC 61.754 63.158 0.00 0.00 36.51 3.67
171 172 2.747460 TACGCTCTACCGCCGTGT 60.747 61.111 0.00 0.00 36.51 4.49
172 173 2.277756 GTACGCTCTACCGCCGTG 60.278 66.667 0.00 0.00 36.51 4.94
173 174 3.512516 GGTACGCTCTACCGCCGT 61.513 66.667 0.00 0.00 38.84 5.68
174 175 3.207669 AGGTACGCTCTACCGCCG 61.208 66.667 2.63 0.00 42.26 6.46
175 176 2.412112 CAGGTACGCTCTACCGCC 59.588 66.667 2.63 0.00 42.26 6.13
176 177 2.412112 CCAGGTACGCTCTACCGC 59.588 66.667 2.63 0.00 42.26 5.68
177 178 3.117372 CCCAGGTACGCTCTACCG 58.883 66.667 2.63 0.00 42.26 4.02
178 179 1.610554 TTGCCCAGGTACGCTCTACC 61.611 60.000 0.12 0.12 37.86 3.18
179 180 0.248289 TTTGCCCAGGTACGCTCTAC 59.752 55.000 0.00 0.00 0.00 2.59
180 181 0.248289 GTTTGCCCAGGTACGCTCTA 59.752 55.000 0.00 0.00 0.00 2.43
181 182 1.003718 GTTTGCCCAGGTACGCTCT 60.004 57.895 0.00 0.00 0.00 4.09
182 183 2.388232 CGTTTGCCCAGGTACGCTC 61.388 63.158 0.00 0.00 0.00 5.03
183 184 2.358247 CGTTTGCCCAGGTACGCT 60.358 61.111 0.00 0.00 0.00 5.07
184 185 3.428282 CCGTTTGCCCAGGTACGC 61.428 66.667 0.00 0.00 32.97 4.42
185 186 3.428282 GCCGTTTGCCCAGGTACG 61.428 66.667 0.00 0.00 0.00 3.67
186 187 2.033602 AGCCGTTTGCCCAGGTAC 59.966 61.111 0.00 0.00 42.71 3.34
187 188 2.033448 CAGCCGTTTGCCCAGGTA 59.967 61.111 0.00 0.00 42.71 3.08
188 189 4.204028 ACAGCCGTTTGCCCAGGT 62.204 61.111 0.00 0.00 42.71 4.00
189 190 3.365265 GACAGCCGTTTGCCCAGG 61.365 66.667 0.00 0.00 42.71 4.45
190 191 1.526575 ATTGACAGCCGTTTGCCCAG 61.527 55.000 0.00 0.00 42.71 4.45
191 192 1.530419 ATTGACAGCCGTTTGCCCA 60.530 52.632 0.00 0.00 42.71 5.36
192 193 1.080569 CATTGACAGCCGTTTGCCC 60.081 57.895 0.00 0.00 42.71 5.36
193 194 1.734117 GCATTGACAGCCGTTTGCC 60.734 57.895 0.00 0.00 42.71 4.52
194 195 0.730494 GAGCATTGACAGCCGTTTGC 60.730 55.000 0.00 0.00 41.71 3.68
195 196 0.453282 CGAGCATTGACAGCCGTTTG 60.453 55.000 0.00 0.00 0.00 2.93
196 197 0.884704 ACGAGCATTGACAGCCGTTT 60.885 50.000 0.00 0.00 36.15 3.60
197 198 0.884704 AACGAGCATTGACAGCCGTT 60.885 50.000 0.00 0.00 40.96 4.44
198 199 1.301716 AACGAGCATTGACAGCCGT 60.302 52.632 0.00 0.00 39.38 5.68
199 200 1.133253 CAACGAGCATTGACAGCCG 59.867 57.895 0.00 0.00 33.79 5.52
200 201 1.154150 GCAACGAGCATTGACAGCC 60.154 57.895 0.00 0.00 44.79 4.85
201 202 1.510623 CGCAACGAGCATTGACAGC 60.511 57.895 0.00 0.00 46.13 4.40
202 203 0.512518 TTCGCAACGAGCATTGACAG 59.487 50.000 0.00 0.00 46.13 3.51
203 204 0.234625 GTTCGCAACGAGCATTGACA 59.765 50.000 0.00 0.00 46.13 3.58
204 205 2.987535 GTTCGCAACGAGCATTGAC 58.012 52.632 0.00 0.00 46.13 3.18
219 220 0.109781 ACATGCATTGCCGAACGTTC 60.110 50.000 18.47 18.47 0.00 3.95
220 221 0.387112 CACATGCATTGCCGAACGTT 60.387 50.000 0.00 0.00 0.00 3.99
221 222 1.209898 CACATGCATTGCCGAACGT 59.790 52.632 6.12 0.00 0.00 3.99
222 223 1.066656 CACACATGCATTGCCGAACG 61.067 55.000 6.12 0.00 0.00 3.95
223 224 0.733566 CCACACATGCATTGCCGAAC 60.734 55.000 6.12 0.00 0.00 3.95
224 225 1.585517 CCACACATGCATTGCCGAA 59.414 52.632 6.12 0.00 0.00 4.30
225 226 2.992273 GCCACACATGCATTGCCGA 61.992 57.895 6.12 0.00 0.00 5.54
226 227 2.507547 GCCACACATGCATTGCCG 60.508 61.111 6.12 0.00 0.00 5.69
227 228 2.507547 CGCCACACATGCATTGCC 60.508 61.111 6.12 0.00 0.00 4.52
228 229 2.507547 CCGCCACACATGCATTGC 60.508 61.111 0.00 0.46 0.00 3.56
229 230 2.507547 GCCGCCACACATGCATTG 60.508 61.111 0.00 1.69 0.00 2.82
230 231 3.762247 GGCCGCCACACATGCATT 61.762 61.111 3.91 0.00 0.00 3.56
234 235 2.881539 ATCTCTGGCCGCCACACATG 62.882 60.000 8.43 0.00 0.00 3.21
235 236 1.337384 TATCTCTGGCCGCCACACAT 61.337 55.000 8.43 2.77 0.00 3.21
236 237 1.987306 TATCTCTGGCCGCCACACA 60.987 57.895 8.43 0.00 0.00 3.72
237 238 1.521681 GTATCTCTGGCCGCCACAC 60.522 63.158 8.43 0.00 0.00 3.82
238 239 1.960040 CTGTATCTCTGGCCGCCACA 61.960 60.000 8.43 2.76 0.00 4.17
239 240 1.227380 CTGTATCTCTGGCCGCCAC 60.227 63.158 8.43 0.00 0.00 5.01
240 241 1.685765 ACTGTATCTCTGGCCGCCA 60.686 57.895 12.67 12.67 0.00 5.69
241 242 1.227380 CACTGTATCTCTGGCCGCC 60.227 63.158 1.04 1.04 0.00 6.13
242 243 1.227380 CCACTGTATCTCTGGCCGC 60.227 63.158 0.00 0.00 0.00 6.53
243 244 1.227380 GCCACTGTATCTCTGGCCG 60.227 63.158 0.00 0.00 44.15 6.13
244 245 1.227380 CGCCACTGTATCTCTGGCC 60.227 63.158 0.00 0.00 46.73 5.36
245 246 1.227380 CCGCCACTGTATCTCTGGC 60.227 63.158 0.00 0.00 46.07 4.85
246 247 1.227380 GCCGCCACTGTATCTCTGG 60.227 63.158 0.00 0.00 0.00 3.86
247 248 0.108186 TTGCCGCCACTGTATCTCTG 60.108 55.000 0.00 0.00 0.00 3.35
248 249 0.108138 GTTGCCGCCACTGTATCTCT 60.108 55.000 0.00 0.00 0.00 3.10
249 250 0.391130 TGTTGCCGCCACTGTATCTC 60.391 55.000 0.00 0.00 0.00 2.75
250 251 0.391661 CTGTTGCCGCCACTGTATCT 60.392 55.000 0.00 0.00 0.00 1.98
251 252 0.391130 TCTGTTGCCGCCACTGTATC 60.391 55.000 0.00 0.00 0.00 2.24
252 253 0.391661 CTCTGTTGCCGCCACTGTAT 60.392 55.000 0.00 0.00 0.00 2.29
253 254 1.005037 CTCTGTTGCCGCCACTGTA 60.005 57.895 0.00 0.00 0.00 2.74
254 255 2.281070 CTCTGTTGCCGCCACTGT 60.281 61.111 0.00 0.00 0.00 3.55
255 256 3.052082 CCTCTGTTGCCGCCACTG 61.052 66.667 0.00 0.00 0.00 3.66
256 257 3.560251 ACCTCTGTTGCCGCCACT 61.560 61.111 0.00 0.00 0.00 4.00
257 258 3.357079 CACCTCTGTTGCCGCCAC 61.357 66.667 0.00 0.00 0.00 5.01
258 259 4.641645 CCACCTCTGTTGCCGCCA 62.642 66.667 0.00 0.00 0.00 5.69
259 260 4.329545 TCCACCTCTGTTGCCGCC 62.330 66.667 0.00 0.00 0.00 6.13
260 261 2.743928 CTCCACCTCTGTTGCCGC 60.744 66.667 0.00 0.00 0.00 6.53
261 262 2.046892 CCTCCACCTCTGTTGCCG 60.047 66.667 0.00 0.00 0.00 5.69
262 263 0.890996 CAACCTCCACCTCTGTTGCC 60.891 60.000 0.00 0.00 32.62 4.52
263 264 2.633860 CAACCTCCACCTCTGTTGC 58.366 57.895 0.00 0.00 32.62 4.17
264 265 0.179020 TGCAACCTCCACCTCTGTTG 60.179 55.000 0.00 0.00 40.71 3.33
265 266 0.109342 CTGCAACCTCCACCTCTGTT 59.891 55.000 0.00 0.00 0.00 3.16
266 267 0.764369 TCTGCAACCTCCACCTCTGT 60.764 55.000 0.00 0.00 0.00 3.41
267 268 0.617413 ATCTGCAACCTCCACCTCTG 59.383 55.000 0.00 0.00 0.00 3.35
268 269 0.617413 CATCTGCAACCTCCACCTCT 59.383 55.000 0.00 0.00 0.00 3.69
269 270 1.028868 GCATCTGCAACCTCCACCTC 61.029 60.000 0.00 0.00 41.59 3.85
270 271 1.001641 GCATCTGCAACCTCCACCT 60.002 57.895 0.00 0.00 41.59 4.00
271 272 3.595819 GCATCTGCAACCTCCACC 58.404 61.111 0.00 0.00 41.59 4.61
281 282 1.217244 CCCCTTGCTTTGCATCTGC 59.783 57.895 0.00 0.00 38.76 4.26
282 283 0.901580 ACCCCCTTGCTTTGCATCTG 60.902 55.000 0.00 0.00 38.76 2.90
283 284 0.704076 TACCCCCTTGCTTTGCATCT 59.296 50.000 0.00 0.00 38.76 2.90
284 285 1.555967 TTACCCCCTTGCTTTGCATC 58.444 50.000 0.00 0.00 38.76 3.91
285 286 1.901833 CTTTACCCCCTTGCTTTGCAT 59.098 47.619 0.00 0.00 38.76 3.96
286 287 1.337118 CTTTACCCCCTTGCTTTGCA 58.663 50.000 0.00 0.00 36.47 4.08
287 288 1.338107 ACTTTACCCCCTTGCTTTGC 58.662 50.000 0.00 0.00 0.00 3.68
288 289 4.010349 CTCTACTTTACCCCCTTGCTTTG 58.990 47.826 0.00 0.00 0.00 2.77
289 290 3.010250 CCTCTACTTTACCCCCTTGCTTT 59.990 47.826 0.00 0.00 0.00 3.51
290 291 2.576648 CCTCTACTTTACCCCCTTGCTT 59.423 50.000 0.00 0.00 0.00 3.91
291 292 2.197465 CCTCTACTTTACCCCCTTGCT 58.803 52.381 0.00 0.00 0.00 3.91
292 293 2.170817 CTCCTCTACTTTACCCCCTTGC 59.829 54.545 0.00 0.00 0.00 4.01
293 294 3.197983 CACTCCTCTACTTTACCCCCTTG 59.802 52.174 0.00 0.00 0.00 3.61
294 295 3.078612 TCACTCCTCTACTTTACCCCCTT 59.921 47.826 0.00 0.00 0.00 3.95
295 296 2.658489 TCACTCCTCTACTTTACCCCCT 59.342 50.000 0.00 0.00 0.00 4.79
296 297 3.111741 TCACTCCTCTACTTTACCCCC 57.888 52.381 0.00 0.00 0.00 5.40
297 298 4.776308 TCTTTCACTCCTCTACTTTACCCC 59.224 45.833 0.00 0.00 0.00 4.95
298 299 5.997384 TCTTTCACTCCTCTACTTTACCC 57.003 43.478 0.00 0.00 0.00 3.69
299 300 8.722394 CATTTTCTTTCACTCCTCTACTTTACC 58.278 37.037 0.00 0.00 0.00 2.85
300 301 9.490379 TCATTTTCTTTCACTCCTCTACTTTAC 57.510 33.333 0.00 0.00 0.00 2.01
301 302 9.712305 CTCATTTTCTTTCACTCCTCTACTTTA 57.288 33.333 0.00 0.00 0.00 1.85
302 303 8.432805 TCTCATTTTCTTTCACTCCTCTACTTT 58.567 33.333 0.00 0.00 0.00 2.66
303 304 7.967908 TCTCATTTTCTTTCACTCCTCTACTT 58.032 34.615 0.00 0.00 0.00 2.24
304 305 7.546250 TCTCATTTTCTTTCACTCCTCTACT 57.454 36.000 0.00 0.00 0.00 2.57
305 306 7.221838 CGATCTCATTTTCTTTCACTCCTCTAC 59.778 40.741 0.00 0.00 0.00 2.59
306 307 7.261325 CGATCTCATTTTCTTTCACTCCTCTA 58.739 38.462 0.00 0.00 0.00 2.43
307 308 6.105333 CGATCTCATTTTCTTTCACTCCTCT 58.895 40.000 0.00 0.00 0.00 3.69
308 309 5.293079 CCGATCTCATTTTCTTTCACTCCTC 59.707 44.000 0.00 0.00 0.00 3.71
309 310 5.181748 CCGATCTCATTTTCTTTCACTCCT 58.818 41.667 0.00 0.00 0.00 3.69
310 311 4.333926 CCCGATCTCATTTTCTTTCACTCC 59.666 45.833 0.00 0.00 0.00 3.85
311 312 5.178797 TCCCGATCTCATTTTCTTTCACTC 58.821 41.667 0.00 0.00 0.00 3.51
312 313 5.165961 TCCCGATCTCATTTTCTTTCACT 57.834 39.130 0.00 0.00 0.00 3.41
313 314 5.220931 CCATCCCGATCTCATTTTCTTTCAC 60.221 44.000 0.00 0.00 0.00 3.18
314 315 4.883585 CCATCCCGATCTCATTTTCTTTCA 59.116 41.667 0.00 0.00 0.00 2.69
315 316 4.261363 GCCATCCCGATCTCATTTTCTTTC 60.261 45.833 0.00 0.00 0.00 2.62
316 317 3.633986 GCCATCCCGATCTCATTTTCTTT 59.366 43.478 0.00 0.00 0.00 2.52
317 318 3.217626 GCCATCCCGATCTCATTTTCTT 58.782 45.455 0.00 0.00 0.00 2.52
318 319 2.808202 CGCCATCCCGATCTCATTTTCT 60.808 50.000 0.00 0.00 0.00 2.52
319 320 1.532868 CGCCATCCCGATCTCATTTTC 59.467 52.381 0.00 0.00 0.00 2.29
320 321 1.597742 CGCCATCCCGATCTCATTTT 58.402 50.000 0.00 0.00 0.00 1.82
321 322 0.250467 CCGCCATCCCGATCTCATTT 60.250 55.000 0.00 0.00 0.00 2.32
322 323 1.121407 TCCGCCATCCCGATCTCATT 61.121 55.000 0.00 0.00 0.00 2.57
323 324 0.906756 ATCCGCCATCCCGATCTCAT 60.907 55.000 0.00 0.00 0.00 2.90
324 325 1.121407 AATCCGCCATCCCGATCTCA 61.121 55.000 0.00 0.00 0.00 3.27
325 326 0.035458 AAATCCGCCATCCCGATCTC 59.965 55.000 0.00 0.00 0.00 2.75
326 327 1.348064 TAAATCCGCCATCCCGATCT 58.652 50.000 0.00 0.00 0.00 2.75
327 328 2.178912 TTAAATCCGCCATCCCGATC 57.821 50.000 0.00 0.00 0.00 3.69
328 329 2.436417 CATTAAATCCGCCATCCCGAT 58.564 47.619 0.00 0.00 0.00 4.18
329 330 1.544537 CCATTAAATCCGCCATCCCGA 60.545 52.381 0.00 0.00 0.00 5.14
330 331 0.881118 CCATTAAATCCGCCATCCCG 59.119 55.000 0.00 0.00 0.00 5.14
331 332 1.886542 GTCCATTAAATCCGCCATCCC 59.113 52.381 0.00 0.00 0.00 3.85
332 333 1.886542 GGTCCATTAAATCCGCCATCC 59.113 52.381 0.00 0.00 0.00 3.51
333 334 2.554032 CAGGTCCATTAAATCCGCCATC 59.446 50.000 0.00 0.00 0.00 3.51
334 335 2.586425 CAGGTCCATTAAATCCGCCAT 58.414 47.619 0.00 0.00 0.00 4.40
335 336 1.409521 CCAGGTCCATTAAATCCGCCA 60.410 52.381 0.00 0.00 0.00 5.69
336 337 1.318576 CCAGGTCCATTAAATCCGCC 58.681 55.000 0.00 0.00 0.00 6.13
337 338 1.676006 CACCAGGTCCATTAAATCCGC 59.324 52.381 0.00 0.00 0.00 5.54
338 339 2.682856 CACACCAGGTCCATTAAATCCG 59.317 50.000 0.00 0.00 0.00 4.18
339 340 3.694566 GACACACCAGGTCCATTAAATCC 59.305 47.826 0.00 0.00 0.00 3.01
340 341 3.374058 CGACACACCAGGTCCATTAAATC 59.626 47.826 0.00 0.00 31.55 2.17
341 342 3.343617 CGACACACCAGGTCCATTAAAT 58.656 45.455 0.00 0.00 31.55 1.40
342 343 2.551287 CCGACACACCAGGTCCATTAAA 60.551 50.000 0.00 0.00 31.55 1.52
343 344 1.002659 CCGACACACCAGGTCCATTAA 59.997 52.381 0.00 0.00 31.55 1.40
344 345 0.611200 CCGACACACCAGGTCCATTA 59.389 55.000 0.00 0.00 31.55 1.90
345 346 1.374947 CCGACACACCAGGTCCATT 59.625 57.895 0.00 0.00 31.55 3.16
346 347 2.592993 CCCGACACACCAGGTCCAT 61.593 63.158 0.00 0.00 31.55 3.41
347 348 3.238497 CCCGACACACCAGGTCCA 61.238 66.667 0.00 0.00 31.55 4.02
348 349 2.726822 GAACCCGACACACCAGGTCC 62.727 65.000 0.00 0.00 31.55 4.46
349 350 1.301479 GAACCCGACACACCAGGTC 60.301 63.158 0.00 0.00 0.00 3.85
350 351 2.814835 GGAACCCGACACACCAGGT 61.815 63.158 0.00 0.00 0.00 4.00
351 352 2.032071 GGAACCCGACACACCAGG 59.968 66.667 0.00 0.00 0.00 4.45
352 353 1.147376 TTGGAACCCGACACACCAG 59.853 57.895 0.00 0.00 32.16 4.00
353 354 1.153127 GTTGGAACCCGACACACCA 60.153 57.895 0.00 0.00 37.82 4.17
354 355 1.153127 TGTTGGAACCCGACACACC 60.153 57.895 2.04 0.00 42.43 4.16
355 356 4.544001 TGTTGGAACCCGACACAC 57.456 55.556 2.04 0.00 42.43 3.82
359 360 1.303317 AGCCATGTTGGAACCCGAC 60.303 57.895 0.00 0.00 40.96 4.79
360 361 1.303236 CAGCCATGTTGGAACCCGA 60.303 57.895 0.00 0.00 40.96 5.14
361 362 0.680921 ATCAGCCATGTTGGAACCCG 60.681 55.000 0.00 0.00 40.96 5.28
362 363 0.819582 CATCAGCCATGTTGGAACCC 59.180 55.000 0.00 0.00 40.96 4.11
363 364 1.474077 GACATCAGCCATGTTGGAACC 59.526 52.381 0.00 0.00 46.53 3.62
364 365 1.474077 GGACATCAGCCATGTTGGAAC 59.526 52.381 0.00 0.00 46.53 3.62
365 366 1.838112 GGACATCAGCCATGTTGGAA 58.162 50.000 0.00 0.00 46.53 3.53
366 367 0.392863 CGGACATCAGCCATGTTGGA 60.393 55.000 0.00 0.00 46.53 3.53
367 368 1.378882 CCGGACATCAGCCATGTTGG 61.379 60.000 0.00 3.14 46.53 3.77
368 369 0.392863 TCCGGACATCAGCCATGTTG 60.393 55.000 0.00 0.00 46.53 3.33
369 370 0.392998 GTCCGGACATCAGCCATGTT 60.393 55.000 29.75 0.00 46.53 2.71
371 372 0.531532 GAGTCCGGACATCAGCCATG 60.532 60.000 35.00 0.00 38.64 3.66
372 373 1.826024 GAGTCCGGACATCAGCCAT 59.174 57.895 35.00 13.05 0.00 4.40
373 374 2.710902 CGAGTCCGGACATCAGCCA 61.711 63.158 35.00 0.00 0.00 4.75
374 375 2.105128 CGAGTCCGGACATCAGCC 59.895 66.667 35.00 15.36 0.00 4.85
386 387 3.310860 ATGGTTGCGGGACCGAGTC 62.311 63.158 15.99 3.14 42.83 3.36
387 388 3.310860 GATGGTTGCGGGACCGAGT 62.311 63.158 15.99 0.00 42.83 4.18
388 389 2.511600 GATGGTTGCGGGACCGAG 60.512 66.667 15.99 0.00 42.83 4.63
389 390 4.090588 GGATGGTTGCGGGACCGA 62.091 66.667 15.99 0.00 42.83 4.69
391 392 4.815108 GGGGATGGTTGCGGGACC 62.815 72.222 0.00 0.00 40.23 4.46
392 393 4.815108 GGGGGATGGTTGCGGGAC 62.815 72.222 0.00 0.00 0.00 4.46
406 407 2.017049 CGCAAATTAGAGACAAGGGGG 58.983 52.381 0.00 0.00 0.00 5.40
407 408 2.939103 CTCGCAAATTAGAGACAAGGGG 59.061 50.000 0.70 0.00 36.65 4.79
408 409 3.861840 TCTCGCAAATTAGAGACAAGGG 58.138 45.455 4.65 0.00 38.46 3.95
409 410 4.748892 TCTCTCGCAAATTAGAGACAAGG 58.251 43.478 2.16 0.00 42.52 3.61
410 411 6.367422 ACTTTCTCTCGCAAATTAGAGACAAG 59.633 38.462 16.40 16.40 46.01 3.16
411 412 6.146184 CACTTTCTCTCGCAAATTAGAGACAA 59.854 38.462 5.35 0.29 46.01 3.18
412 413 5.635280 CACTTTCTCTCGCAAATTAGAGACA 59.365 40.000 5.35 0.00 46.01 3.41
413 414 5.445275 GCACTTTCTCTCGCAAATTAGAGAC 60.445 44.000 5.35 0.00 46.01 3.36
414 415 4.627467 GCACTTTCTCTCGCAAATTAGAGA 59.373 41.667 2.16 2.16 44.99 3.10
415 416 4.491602 CGCACTTTCTCTCGCAAATTAGAG 60.492 45.833 0.00 0.00 40.54 2.43
416 417 3.367932 CGCACTTTCTCTCGCAAATTAGA 59.632 43.478 0.00 0.00 0.00 2.10
417 418 3.123621 ACGCACTTTCTCTCGCAAATTAG 59.876 43.478 0.00 0.00 0.00 1.73
418 419 3.064207 ACGCACTTTCTCTCGCAAATTA 58.936 40.909 0.00 0.00 0.00 1.40
419 420 1.873591 ACGCACTTTCTCTCGCAAATT 59.126 42.857 0.00 0.00 0.00 1.82
420 421 1.461127 GACGCACTTTCTCTCGCAAAT 59.539 47.619 0.00 0.00 0.00 2.32
421 422 0.859232 GACGCACTTTCTCTCGCAAA 59.141 50.000 0.00 0.00 0.00 3.68
422 423 0.032130 AGACGCACTTTCTCTCGCAA 59.968 50.000 0.00 0.00 0.00 4.85
423 424 0.664466 CAGACGCACTTTCTCTCGCA 60.664 55.000 0.00 0.00 0.00 5.10
424 425 1.347817 CCAGACGCACTTTCTCTCGC 61.348 60.000 0.00 0.00 0.00 5.03
425 426 0.241213 TCCAGACGCACTTTCTCTCG 59.759 55.000 0.00 0.00 0.00 4.04
426 427 1.670380 GGTCCAGACGCACTTTCTCTC 60.670 57.143 0.00 0.00 0.00 3.20
427 428 0.318762 GGTCCAGACGCACTTTCTCT 59.681 55.000 0.00 0.00 0.00 3.10
428 429 1.009389 CGGTCCAGACGCACTTTCTC 61.009 60.000 0.00 0.00 0.00 2.87
429 430 1.006102 CGGTCCAGACGCACTTTCT 60.006 57.895 0.00 0.00 0.00 2.52
430 431 3.550656 CGGTCCAGACGCACTTTC 58.449 61.111 0.00 0.00 0.00 2.62
447 448 2.024319 GCATGTATCTCCGCTCGGC 61.024 63.158 2.96 0.00 34.68 5.54
448 449 1.373497 GGCATGTATCTCCGCTCGG 60.373 63.158 1.14 1.14 0.00 4.63
449 450 1.373497 GGGCATGTATCTCCGCTCG 60.373 63.158 0.00 0.00 0.00 5.03
450 451 1.373497 CGGGCATGTATCTCCGCTC 60.373 63.158 0.00 0.00 35.95 5.03
451 452 2.737180 CGGGCATGTATCTCCGCT 59.263 61.111 0.00 0.00 35.95 5.52
453 454 2.137425 TACGCGGGCATGTATCTCCG 62.137 60.000 12.47 0.00 44.70 4.63
454 455 0.388649 CTACGCGGGCATGTATCTCC 60.389 60.000 12.47 0.00 0.00 3.71
455 456 0.314302 ACTACGCGGGCATGTATCTC 59.686 55.000 12.47 0.00 0.00 2.75
456 457 1.612676 TACTACGCGGGCATGTATCT 58.387 50.000 12.47 0.00 0.00 1.98
457 458 2.094906 TCATACTACGCGGGCATGTATC 60.095 50.000 12.47 0.00 0.00 2.24
458 459 1.890489 TCATACTACGCGGGCATGTAT 59.110 47.619 12.47 8.33 0.00 2.29
459 460 1.320507 TCATACTACGCGGGCATGTA 58.679 50.000 12.47 6.24 0.00 2.29
460 461 0.679505 ATCATACTACGCGGGCATGT 59.320 50.000 12.47 3.98 0.00 3.21
461 462 1.795768 AATCATACTACGCGGGCATG 58.204 50.000 12.47 9.53 0.00 4.06
462 463 2.413837 GAAATCATACTACGCGGGCAT 58.586 47.619 12.47 0.00 0.00 4.40
463 464 1.539496 GGAAATCATACTACGCGGGCA 60.539 52.381 12.47 0.00 0.00 5.36
464 465 1.145803 GGAAATCATACTACGCGGGC 58.854 55.000 12.47 0.00 0.00 6.13
465 466 1.001048 TCGGAAATCATACTACGCGGG 60.001 52.381 12.47 5.29 0.00 6.13
466 467 2.410785 TCGGAAATCATACTACGCGG 57.589 50.000 12.47 0.00 0.00 6.46
467 468 3.305964 ACATCGGAAATCATACTACGCG 58.694 45.455 3.53 3.53 0.00 6.01
468 469 3.673809 GGACATCGGAAATCATACTACGC 59.326 47.826 0.00 0.00 0.00 4.42
469 470 3.912563 CGGACATCGGAAATCATACTACG 59.087 47.826 0.00 0.00 34.75 3.51
483 484 2.193447 CACTATGTTGTCCGGACATCG 58.807 52.381 36.52 23.47 41.52 3.84
484 485 1.933853 GCACTATGTTGTCCGGACATC 59.066 52.381 36.52 33.16 41.52 3.06
485 486 1.739035 CGCACTATGTTGTCCGGACAT 60.739 52.381 36.52 24.52 41.52 3.06
486 487 0.389296 CGCACTATGTTGTCCGGACA 60.389 55.000 33.23 33.23 39.98 4.02
487 488 0.108992 TCGCACTATGTTGTCCGGAC 60.109 55.000 28.17 28.17 0.00 4.79
488 489 0.604073 TTCGCACTATGTTGTCCGGA 59.396 50.000 0.00 0.00 0.00 5.14
489 490 1.327460 CATTCGCACTATGTTGTCCGG 59.673 52.381 0.00 0.00 0.00 5.14
490 491 1.999735 ACATTCGCACTATGTTGTCCG 59.000 47.619 0.00 0.00 32.48 4.79
491 492 4.552767 GCATACATTCGCACTATGTTGTCC 60.553 45.833 0.00 0.00 37.42 4.02
492 493 4.033932 TGCATACATTCGCACTATGTTGTC 59.966 41.667 0.00 0.00 37.42 3.18
493 494 3.938334 TGCATACATTCGCACTATGTTGT 59.062 39.130 0.00 0.00 37.42 3.32
494 495 4.521010 CTGCATACATTCGCACTATGTTG 58.479 43.478 0.00 0.00 37.42 3.33
495 496 3.561310 CCTGCATACATTCGCACTATGTT 59.439 43.478 0.00 0.00 37.42 2.71
496 497 3.133691 CCTGCATACATTCGCACTATGT 58.866 45.455 0.00 0.00 39.44 2.29
497 498 2.096069 GCCTGCATACATTCGCACTATG 60.096 50.000 0.00 0.00 33.75 2.23
498 499 2.146342 GCCTGCATACATTCGCACTAT 58.854 47.619 0.00 0.00 33.75 2.12
499 500 1.581934 GCCTGCATACATTCGCACTA 58.418 50.000 0.00 0.00 33.75 2.74
500 501 1.431488 CGCCTGCATACATTCGCACT 61.431 55.000 0.00 0.00 33.75 4.40
501 502 1.010797 CGCCTGCATACATTCGCAC 60.011 57.895 0.00 0.00 33.75 5.34
502 503 2.179547 CCGCCTGCATACATTCGCA 61.180 57.895 0.00 0.00 36.52 5.10
503 504 1.714899 AACCGCCTGCATACATTCGC 61.715 55.000 0.00 0.00 0.00 4.70
504 505 0.732571 AAACCGCCTGCATACATTCG 59.267 50.000 0.00 0.00 0.00 3.34
505 506 1.472480 ACAAACCGCCTGCATACATTC 59.528 47.619 0.00 0.00 0.00 2.67
506 507 1.202114 CACAAACCGCCTGCATACATT 59.798 47.619 0.00 0.00 0.00 2.71
507 508 0.810648 CACAAACCGCCTGCATACAT 59.189 50.000 0.00 0.00 0.00 2.29
508 509 1.240641 CCACAAACCGCCTGCATACA 61.241 55.000 0.00 0.00 0.00 2.29
509 510 1.506262 CCACAAACCGCCTGCATAC 59.494 57.895 0.00 0.00 0.00 2.39
510 511 1.677300 CCCACAAACCGCCTGCATA 60.677 57.895 0.00 0.00 0.00 3.14
511 512 2.990967 CCCACAAACCGCCTGCAT 60.991 61.111 0.00 0.00 0.00 3.96
512 513 4.514585 ACCCACAAACCGCCTGCA 62.515 61.111 0.00 0.00 0.00 4.41
513 514 3.670377 GACCCACAAACCGCCTGC 61.670 66.667 0.00 0.00 0.00 4.85
514 515 3.353836 CGACCCACAAACCGCCTG 61.354 66.667 0.00 0.00 0.00 4.85
515 516 4.636435 CCGACCCACAAACCGCCT 62.636 66.667 0.00 0.00 0.00 5.52
519 520 2.903350 AACGCCGACCCACAAACC 60.903 61.111 0.00 0.00 0.00 3.27
520 521 2.330041 CAACGCCGACCCACAAAC 59.670 61.111 0.00 0.00 0.00 2.93
521 522 2.902846 CCAACGCCGACCCACAAA 60.903 61.111 0.00 0.00 0.00 2.83
522 523 3.818121 CTCCAACGCCGACCCACAA 62.818 63.158 0.00 0.00 0.00 3.33
523 524 4.308458 CTCCAACGCCGACCCACA 62.308 66.667 0.00 0.00 0.00 4.17
524 525 3.310860 ATCTCCAACGCCGACCCAC 62.311 63.158 0.00 0.00 0.00 4.61
525 526 3.000819 ATCTCCAACGCCGACCCA 61.001 61.111 0.00 0.00 0.00 4.51
526 527 2.511600 CATCTCCAACGCCGACCC 60.512 66.667 0.00 0.00 0.00 4.46
527 528 3.195698 GCATCTCCAACGCCGACC 61.196 66.667 0.00 0.00 0.00 4.79
528 529 3.195698 GGCATCTCCAACGCCGAC 61.196 66.667 0.00 0.00 35.79 4.79
531 532 1.095807 GTAAGGGCATCTCCAACGCC 61.096 60.000 0.00 0.00 45.47 5.68
532 533 1.429148 CGTAAGGGCATCTCCAACGC 61.429 60.000 0.00 0.00 33.82 4.84
533 534 1.429148 GCGTAAGGGCATCTCCAACG 61.429 60.000 0.00 0.00 39.69 4.10
534 535 0.107654 AGCGTAAGGGCATCTCCAAC 60.108 55.000 0.00 0.00 36.21 3.77
535 536 1.491668 TAGCGTAAGGGCATCTCCAA 58.508 50.000 0.00 0.00 36.21 3.53
536 537 1.344438 CATAGCGTAAGGGCATCTCCA 59.656 52.381 0.00 0.00 36.21 3.86
537 538 1.338200 CCATAGCGTAAGGGCATCTCC 60.338 57.143 0.00 0.00 38.28 3.71
538 539 1.618837 TCCATAGCGTAAGGGCATCTC 59.381 52.381 0.00 0.00 38.28 2.75
539 540 1.717032 TCCATAGCGTAAGGGCATCT 58.283 50.000 0.00 0.00 38.28 2.90
540 541 2.417719 CTTCCATAGCGTAAGGGCATC 58.582 52.381 0.00 0.00 38.28 3.91
541 542 1.543429 GCTTCCATAGCGTAAGGGCAT 60.543 52.381 0.00 0.00 40.71 4.40
542 543 0.179056 GCTTCCATAGCGTAAGGGCA 60.179 55.000 0.00 0.00 40.71 5.36
543 544 2.618165 GCTTCCATAGCGTAAGGGC 58.382 57.895 0.00 0.00 40.71 5.19
552 553 4.125703 GTGATCTTGTCCAGCTTCCATAG 58.874 47.826 0.00 0.00 0.00 2.23
553 554 3.776969 AGTGATCTTGTCCAGCTTCCATA 59.223 43.478 0.00 0.00 0.00 2.74
554 555 2.575279 AGTGATCTTGTCCAGCTTCCAT 59.425 45.455 0.00 0.00 0.00 3.41
555 556 1.980765 AGTGATCTTGTCCAGCTTCCA 59.019 47.619 0.00 0.00 0.00 3.53
556 557 2.626840 GAGTGATCTTGTCCAGCTTCC 58.373 52.381 0.00 0.00 0.00 3.46
557 558 2.266554 CGAGTGATCTTGTCCAGCTTC 58.733 52.381 0.00 0.00 0.00 3.86
558 559 1.620819 ACGAGTGATCTTGTCCAGCTT 59.379 47.619 0.00 0.00 33.38 3.74
559 560 1.261480 ACGAGTGATCTTGTCCAGCT 58.739 50.000 0.00 0.00 33.38 4.24
560 561 2.941453 TACGAGTGATCTTGTCCAGC 57.059 50.000 0.00 0.00 38.95 4.85
561 562 4.377839 ACATACGAGTGATCTTGTCCAG 57.622 45.455 0.00 0.00 38.95 3.86
562 563 4.219725 TGAACATACGAGTGATCTTGTCCA 59.780 41.667 0.00 0.00 38.95 4.02
563 564 4.744570 TGAACATACGAGTGATCTTGTCC 58.255 43.478 0.00 0.00 38.95 4.02
564 565 5.864474 ACTTGAACATACGAGTGATCTTGTC 59.136 40.000 0.00 0.00 38.95 3.18
565 566 5.784177 ACTTGAACATACGAGTGATCTTGT 58.216 37.500 0.00 0.00 40.89 3.16
566 567 6.366061 TGAACTTGAACATACGAGTGATCTTG 59.634 38.462 0.00 0.00 35.06 3.02
567 568 6.455647 TGAACTTGAACATACGAGTGATCTT 58.544 36.000 0.00 0.00 35.06 2.40
568 569 6.025749 TGAACTTGAACATACGAGTGATCT 57.974 37.500 0.00 0.00 35.06 2.75
569 570 6.145534 TGTTGAACTTGAACATACGAGTGATC 59.854 38.462 0.00 0.00 35.06 2.92
570 571 5.989168 TGTTGAACTTGAACATACGAGTGAT 59.011 36.000 0.00 0.00 35.06 3.06
571 572 5.233476 GTGTTGAACTTGAACATACGAGTGA 59.767 40.000 0.00 0.00 35.81 3.41
572 573 5.432157 GTGTTGAACTTGAACATACGAGTG 58.568 41.667 0.00 0.00 35.81 3.51
573 574 4.510340 GGTGTTGAACTTGAACATACGAGT 59.490 41.667 0.00 0.00 35.81 4.18
574 575 4.084013 GGGTGTTGAACTTGAACATACGAG 60.084 45.833 0.00 0.00 35.81 4.18
575 576 3.810941 GGGTGTTGAACTTGAACATACGA 59.189 43.478 0.00 0.00 35.81 3.43
576 577 3.562141 TGGGTGTTGAACTTGAACATACG 59.438 43.478 0.00 0.00 35.81 3.06
577 578 4.819630 TCTGGGTGTTGAACTTGAACATAC 59.180 41.667 0.00 0.00 35.81 2.39
578 579 5.042463 TCTGGGTGTTGAACTTGAACATA 57.958 39.130 0.00 0.00 35.81 2.29
579 580 3.897239 TCTGGGTGTTGAACTTGAACAT 58.103 40.909 0.00 0.00 35.81 2.71
580 581 3.358111 TCTGGGTGTTGAACTTGAACA 57.642 42.857 0.00 0.00 0.00 3.18
581 582 4.028852 GTTCTGGGTGTTGAACTTGAAC 57.971 45.455 0.00 1.23 39.36 3.18
587 588 4.450082 AACAAAGTTCTGGGTGTTGAAC 57.550 40.909 0.00 0.00 41.84 3.18
588 589 6.783708 AATAACAAAGTTCTGGGTGTTGAA 57.216 33.333 1.04 0.00 35.82 2.69
589 590 6.568869 CAAATAACAAAGTTCTGGGTGTTGA 58.431 36.000 1.04 0.00 35.82 3.18
590 591 5.234116 GCAAATAACAAAGTTCTGGGTGTTG 59.766 40.000 1.04 0.00 35.82 3.33
591 592 5.128663 AGCAAATAACAAAGTTCTGGGTGTT 59.871 36.000 0.00 0.00 37.86 3.32
592 593 4.649218 AGCAAATAACAAAGTTCTGGGTGT 59.351 37.500 0.00 0.00 0.00 4.16
593 594 5.200368 AGCAAATAACAAAGTTCTGGGTG 57.800 39.130 0.00 0.00 0.00 4.61
594 595 6.303839 TCTAGCAAATAACAAAGTTCTGGGT 58.696 36.000 0.00 0.00 0.00 4.51
595 596 6.655003 TCTCTAGCAAATAACAAAGTTCTGGG 59.345 38.462 0.00 0.00 0.00 4.45
596 597 7.672983 TCTCTAGCAAATAACAAAGTTCTGG 57.327 36.000 0.00 0.00 0.00 3.86
597 598 7.695618 GCATCTCTAGCAAATAACAAAGTTCTG 59.304 37.037 0.00 0.00 0.00 3.02
598 599 7.609532 AGCATCTCTAGCAAATAACAAAGTTCT 59.390 33.333 0.00 0.00 0.00 3.01
599 600 7.756558 AGCATCTCTAGCAAATAACAAAGTTC 58.243 34.615 0.00 0.00 0.00 3.01
600 601 7.693969 AGCATCTCTAGCAAATAACAAAGTT 57.306 32.000 0.00 0.00 0.00 2.66
601 602 7.313951 GAGCATCTCTAGCAAATAACAAAGT 57.686 36.000 0.00 0.00 0.00 2.66
619 620 3.873952 GGGATGAGTGTGTTTAGAGCATC 59.126 47.826 0.00 0.00 0.00 3.91
620 621 3.521126 AGGGATGAGTGTGTTTAGAGCAT 59.479 43.478 0.00 0.00 0.00 3.79
621 622 2.906389 AGGGATGAGTGTGTTTAGAGCA 59.094 45.455 0.00 0.00 0.00 4.26
622 623 3.618690 AGGGATGAGTGTGTTTAGAGC 57.381 47.619 0.00 0.00 0.00 4.09
623 624 5.308825 ACAAAGGGATGAGTGTGTTTAGAG 58.691 41.667 0.00 0.00 0.00 2.43
624 625 5.304686 ACAAAGGGATGAGTGTGTTTAGA 57.695 39.130 0.00 0.00 0.00 2.10
625 626 5.530915 TGAACAAAGGGATGAGTGTGTTTAG 59.469 40.000 0.00 0.00 29.75 1.85
626 627 5.441500 TGAACAAAGGGATGAGTGTGTTTA 58.558 37.500 0.00 0.00 29.75 2.01
627 628 4.277476 TGAACAAAGGGATGAGTGTGTTT 58.723 39.130 0.00 0.00 29.75 2.83
628 629 3.885297 CTGAACAAAGGGATGAGTGTGTT 59.115 43.478 0.00 0.00 32.15 3.32
629 630 3.136443 TCTGAACAAAGGGATGAGTGTGT 59.864 43.478 0.00 0.00 0.00 3.72
630 631 3.743521 TCTGAACAAAGGGATGAGTGTG 58.256 45.455 0.00 0.00 0.00 3.82
631 632 4.647564 ATCTGAACAAAGGGATGAGTGT 57.352 40.909 0.00 0.00 0.00 3.55
632 633 6.430925 TGTTTATCTGAACAAAGGGATGAGTG 59.569 38.462 0.00 0.00 36.64 3.51
633 634 6.542821 TGTTTATCTGAACAAAGGGATGAGT 58.457 36.000 0.00 0.00 36.64 3.41
634 635 7.452880 TTGTTTATCTGAACAAAGGGATGAG 57.547 36.000 1.08 0.00 44.13 2.90
657 658 9.905171 GCATCTTTTCTCTTGTCTTTTCTATTT 57.095 29.630 0.00 0.00 0.00 1.40
664 665 4.389374 TCCGCATCTTTTCTCTTGTCTTT 58.611 39.130 0.00 0.00 0.00 2.52
686 687 4.104776 CACGTGCATGAAGTTGTCTTTTT 58.895 39.130 14.17 0.00 33.64 1.94
704 705 0.319555 AAGAGTACGCATGCACACGT 60.320 50.000 19.57 18.46 45.85 4.49
712 713 4.142447 ACATCACTACGAAAGAGTACGCAT 60.142 41.667 0.00 0.00 0.00 4.73
727 728 3.756434 TCACTCGATCACACACATCACTA 59.244 43.478 0.00 0.00 0.00 2.74
751 752 8.671384 TCGATCTCCAACTAAAGAAAAAGAAA 57.329 30.769 0.00 0.00 0.00 2.52
794 799 4.771114 TTGACTTCTTCTCCCAACTTGA 57.229 40.909 0.00 0.00 0.00 3.02
818 1063 1.425066 AGGCTGATTTTGGGTCTGACA 59.575 47.619 10.38 0.00 0.00 3.58
819 1064 2.206576 AGGCTGATTTTGGGTCTGAC 57.793 50.000 0.00 0.00 0.00 3.51
820 1065 4.042809 TCTTTAGGCTGATTTTGGGTCTGA 59.957 41.667 0.00 0.00 0.00 3.27
821 1066 4.335416 TCTTTAGGCTGATTTTGGGTCTG 58.665 43.478 0.00 0.00 0.00 3.51
822 1067 4.657814 TCTTTAGGCTGATTTTGGGTCT 57.342 40.909 0.00 0.00 0.00 3.85
823 1068 5.921962 ATTCTTTAGGCTGATTTTGGGTC 57.078 39.130 0.00 0.00 0.00 4.46
824 1069 6.723977 TGTTATTCTTTAGGCTGATTTTGGGT 59.276 34.615 0.00 0.00 0.00 4.51
825 1070 7.169158 TGTTATTCTTTAGGCTGATTTTGGG 57.831 36.000 0.00 0.00 0.00 4.12
826 1071 9.736023 GTATGTTATTCTTTAGGCTGATTTTGG 57.264 33.333 0.00 0.00 0.00 3.28
845 1090 4.293662 TCATGGTGCCACTTGTATGTTA 57.706 40.909 0.00 0.00 0.00 2.41
884 1129 4.222810 CCTTTTGGGCTTTTTAGTAGGCAT 59.777 41.667 0.00 0.00 39.75 4.40
908 1153 4.157840 GGAAAAGTGCTCGGATATTTTGGT 59.842 41.667 0.00 0.00 0.00 3.67
919 1164 2.618709 AGAAAACAGGGAAAAGTGCTCG 59.381 45.455 0.00 0.00 0.00 5.03
1014 1261 1.477700 CTGCTCTGCTCTACTCTGCTT 59.522 52.381 0.00 0.00 0.00 3.91
1022 1269 1.758862 TGCTATTGCTGCTCTGCTCTA 59.241 47.619 0.00 0.00 40.48 2.43
1031 1278 1.664659 CTCTGTGTCTGCTATTGCTGC 59.335 52.381 0.00 0.00 40.48 5.25
1037 1284 6.184068 TCTACTTTCTCTCTGTGTCTGCTAT 58.816 40.000 0.00 0.00 0.00 2.97
1100 1347 0.530870 GGCGAACATACTCTGCCTCC 60.531 60.000 0.00 0.00 42.44 4.30
1215 1510 1.195674 GAAGAAACGAGCAGTTCTGGC 59.804 52.381 0.00 0.00 43.37 4.85
1399 1694 4.512657 CAATTCTCGTGATTGATTCGAGC 58.487 43.478 8.60 0.00 46.76 5.03
1446 1741 1.216122 GACATCTGGCATCGCTCTTC 58.784 55.000 0.00 0.00 0.00 2.87
1478 1773 9.758021 ATTCACAATTGATGCCTATAATATCCA 57.242 29.630 13.59 0.00 0.00 3.41
1586 1881 9.477484 AAAAATCTAGTAGAGTTGTACACACAG 57.523 33.333 13.27 0.00 32.34 3.66
1614 1913 5.455899 GCTAGCTAGTAGACTTGTACCCCTA 60.456 48.000 21.62 0.00 0.00 3.53
1647 1946 2.440501 CGAAGCAAATTTCCGGAATCG 58.559 47.619 19.62 17.97 0.00 3.34
1713 2020 5.063204 TGTCGGATGGGCTAGAATTAATTG 58.937 41.667 5.17 0.00 0.00 2.32
1747 2054 4.538490 ACCCTTATTCACAATCTACCACCA 59.462 41.667 0.00 0.00 0.00 4.17
1788 2095 2.781646 CGAAAGCGGTTTCAGTCAAAAC 59.218 45.455 32.25 9.63 42.06 2.43
1792 2099 1.942677 TTCGAAAGCGGTTTCAGTCA 58.057 45.000 32.25 15.00 42.06 3.41
1803 2110 9.865484 GTATCCTATAAAAACAGATTCGAAAGC 57.135 33.333 0.00 0.00 0.00 3.51
1813 2120 8.174733 TCTCCTACCGTATCCTATAAAAACAG 57.825 38.462 0.00 0.00 0.00 3.16
1834 2141 3.438781 TGTGTGCGGATGTAAAAATCTCC 59.561 43.478 0.00 0.00 0.00 3.71
1908 2216 6.944234 TCCTATGGCGTCATATCATACTAG 57.056 41.667 10.69 0.00 35.53 2.57
1953 2263 9.709387 TCATATATCCATATTTAGAAGGTCGGA 57.291 33.333 0.00 0.00 0.00 4.55
2016 2326 9.252962 CAAACTTGAGAGACATGCTTTTAAAAT 57.747 29.630 0.09 0.00 0.00 1.82
2017 2327 8.465999 TCAAACTTGAGAGACATGCTTTTAAAA 58.534 29.630 0.00 0.00 32.50 1.52
2018 2328 7.915397 GTCAAACTTGAGAGACATGCTTTTAAA 59.085 33.333 0.00 0.00 37.98 1.52
2019 2329 7.066887 TGTCAAACTTGAGAGACATGCTTTTAA 59.933 33.333 0.00 0.00 37.98 1.52
2060 2370 5.769484 ATACTCGTGAATATCGTGTTCCT 57.231 39.130 0.00 0.00 36.63 3.36
2140 2451 8.457261 GCTCTTCTATTTGACATCAATTTGACT 58.543 33.333 0.15 0.00 35.55 3.41
2255 2578 4.517285 ACAACGATGGTCAGCTTCATTAT 58.483 39.130 0.00 0.00 0.00 1.28
2267 2590 3.417069 TCCTTCATCAACAACGATGGT 57.583 42.857 0.00 0.00 42.58 3.55
2306 2630 0.250513 GTCGACTTCAAGCCCCTCAT 59.749 55.000 8.70 0.00 0.00 2.90
2308 2632 0.250513 ATGTCGACTTCAAGCCCCTC 59.749 55.000 17.92 0.00 0.00 4.30
2314 2638 6.951256 TGACTTATGAATGTCGACTTCAAG 57.049 37.500 24.30 20.93 36.30 3.02
2400 2725 4.818546 CCAGTTGACACTTGAGTTCTTGAT 59.181 41.667 0.00 0.00 0.00 2.57
2435 2761 7.791029 TGTATCACTTTCATAAGTAGGATGCA 58.209 34.615 0.00 0.00 42.67 3.96
2449 2775 6.908870 TGTCAGCATGTATGTATCACTTTC 57.091 37.500 0.00 0.00 37.40 2.62
2462 2788 9.787532 GTTATTTATGTAACAATGTCAGCATGT 57.212 29.630 0.00 0.00 34.59 3.21
2506 2832 4.401519 TCCTACCACTATGAAAACTCTCGG 59.598 45.833 0.00 0.00 0.00 4.63
2514 2840 3.118038 GGGCATGTCCTACCACTATGAAA 60.118 47.826 9.76 0.00 34.39 2.69
2550 2876 6.096282 TCAAAGAAATTCGTTCCCTCAAAGTT 59.904 34.615 0.00 0.00 36.86 2.66
2623 2949 4.314961 TCATGCTCGTGAACAACATAAGT 58.685 39.130 0.00 0.00 0.00 2.24
2646 2972 2.158856 CCAGAGATAGTGCATGGCTCAA 60.159 50.000 10.18 0.00 0.00 3.02
2651 2978 6.949352 AATAAAACCAGAGATAGTGCATGG 57.051 37.500 0.00 0.00 37.07 3.66
2676 3003 6.893554 ACTACACATGGATTACCTACTACACA 59.106 38.462 0.00 0.00 37.04 3.72



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.