Multiple sequence alignment - TraesCS2A01G414800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G414800 chr2A 100.000 5880 0 0 1 5880 671939679 671945558 0.000000e+00 10859.0
1 TraesCS2A01G414800 chr2A 96.939 98 3 0 5329 5426 671944947 671945044 1.310000e-36 165.0
2 TraesCS2A01G414800 chr2A 96.939 98 3 0 5269 5366 671945007 671945104 1.310000e-36 165.0
3 TraesCS2A01G414800 chr2D 96.546 3387 107 8 1928 5306 526805667 526809051 0.000000e+00 5598.0
4 TraesCS2A01G414800 chr2D 92.155 1759 89 18 16 1756 526803942 526805669 0.000000e+00 2438.0
5 TraesCS2A01G414800 chr2D 89.800 500 42 3 5389 5880 526809015 526809513 2.990000e-177 632.0
6 TraesCS2A01G414800 chr2D 92.818 181 11 2 1754 1933 420278152 420278331 1.630000e-65 261.0
7 TraesCS2A01G414800 chr2B 95.853 3328 107 12 1928 5238 623400420 623403733 0.000000e+00 5352.0
8 TraesCS2A01G414800 chr2B 92.286 1776 97 16 1 1756 623398667 623400422 0.000000e+00 2484.0
9 TraesCS2A01G414800 chr2B 89.691 291 28 2 5490 5779 623403784 623404073 2.590000e-98 370.0
10 TraesCS2A01G414800 chr5D 83.576 481 64 12 5388 5863 410854434 410853964 2.520000e-118 436.0
11 TraesCS2A01G414800 chr5D 79.869 457 71 6 5404 5847 493221667 493222115 1.230000e-81 315.0
12 TraesCS2A01G414800 chr5D 78.478 460 74 10 5439 5880 245995679 245996131 1.610000e-70 278.0
13 TraesCS2A01G414800 chr5D 78.478 460 74 10 5439 5880 246003379 246003831 1.610000e-70 278.0
14 TraesCS2A01G414800 chr5D 92.935 184 11 2 1755 1936 3616476 3616659 3.490000e-67 267.0
15 TraesCS2A01G414800 chr6B 82.881 479 74 6 5389 5863 508828607 508829081 1.960000e-114 424.0
16 TraesCS2A01G414800 chr6B 84.438 347 50 4 5394 5738 181730720 181730376 7.300000e-89 339.0
17 TraesCS2A01G414800 chr3D 86.087 345 44 2 5523 5863 571913492 571913148 9.310000e-98 368.0
18 TraesCS2A01G414800 chr3D 84.943 352 44 7 5515 5863 571920943 571920598 1.210000e-91 348.0
19 TraesCS2A01G414800 chr7D 85.511 352 41 6 5535 5878 424112477 424112128 5.600000e-95 359.0
20 TraesCS2A01G414800 chr5B 84.270 356 42 9 5535 5880 34907224 34906873 9.440000e-88 335.0
21 TraesCS2A01G414800 chr5A 97.647 170 2 1 1755 1922 417886574 417886743 2.070000e-74 291.0
22 TraesCS2A01G414800 chr5A 88.889 45 5 0 5262 5306 340162822 340162866 8.230000e-04 56.5
23 TraesCS2A01G414800 chr5A 92.308 39 2 1 5328 5366 340162829 340162866 3.000000e-03 54.7
24 TraesCS2A01G414800 chr6A 96.386 166 6 0 1758 1923 40605460 40605625 2.090000e-69 274.0
25 TraesCS2A01G414800 chr7A 96.364 165 6 0 1758 1922 337925921 337926085 7.510000e-69 272.0
26 TraesCS2A01G414800 chr7A 94.318 176 6 4 1758 1930 347261065 347260891 3.490000e-67 267.0
27 TraesCS2A01G414800 chr6D 95.181 166 8 0 1758 1923 104041162 104041327 4.520000e-66 263.0
28 TraesCS2A01G414800 chr1D 93.750 176 8 3 1755 1928 183930287 183930113 1.630000e-65 261.0
29 TraesCS2A01G414800 chr7B 88.350 206 19 5 1735 1940 748308769 748308569 5.890000e-60 243.0
30 TraesCS2A01G414800 chr7B 96.970 33 1 0 5334 5366 9695209 9695241 8.230000e-04 56.5
31 TraesCS2A01G414800 chr7B 100.000 29 0 0 5278 5306 9695213 9695241 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G414800 chr2A 671939679 671945558 5879 False 3729.666667 10859 97.959333 1 5880 3 chr2A.!!$F1 5879
1 TraesCS2A01G414800 chr2D 526803942 526809513 5571 False 2889.333333 5598 92.833667 16 5880 3 chr2D.!!$F2 5864
2 TraesCS2A01G414800 chr2B 623398667 623404073 5406 False 2735.333333 5352 92.610000 1 5779 3 chr2B.!!$F1 5778

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
724 733 0.806102 CGATGGTAGAACCGCTGGTG 60.806 60.000 0.94 0.00 42.58 4.17 F
794 803 1.001633 GTGGAAGTGGAGCGGAGTTTA 59.998 52.381 0.00 0.00 0.00 2.01 F
1727 1755 1.278985 TGGTGCTTGTGCTACTGCTAT 59.721 47.619 0.00 0.00 40.48 2.97 F
3120 3152 0.179119 GCCATGCTTGCAGATTGGTC 60.179 55.000 13.22 4.75 0.00 4.02 F
3763 3796 0.101219 GCCCATTGTTTGAGCGGATC 59.899 55.000 0.00 0.00 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1526 1554 0.181114 AGCACTTTGGCTGTGTCTCA 59.819 50.000 7.44 0.0 43.89 3.27 R
2597 2629 2.225467 GCATGGAGGTAATCTTGAGGC 58.775 52.381 0.00 0.0 0.00 4.70 R
3703 3736 1.632409 AGAAGAATCCCAAGCTGCTCA 59.368 47.619 1.00 0.0 0.00 4.26 R
4588 4621 1.349688 TGGTAATGAGTTGGACGGCTT 59.650 47.619 0.00 0.0 0.00 4.35 R
5281 5337 0.106769 ATGTATGCGGGCATGGTTGA 60.107 50.000 16.03 0.0 37.82 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
166 167 8.420374 AATTGCTCAAATATTCTGCAAAGATG 57.580 30.769 19.33 0.75 44.90 2.90
508 514 1.439543 TCACTTCCCCTTCCTTCCCTA 59.560 52.381 0.00 0.00 0.00 3.53
557 563 1.412343 CAAGAAAACCCCAACCCACAG 59.588 52.381 0.00 0.00 0.00 3.66
724 733 0.806102 CGATGGTAGAACCGCTGGTG 60.806 60.000 0.94 0.00 42.58 4.17
794 803 1.001633 GTGGAAGTGGAGCGGAGTTTA 59.998 52.381 0.00 0.00 0.00 2.01
795 804 1.001633 TGGAAGTGGAGCGGAGTTTAC 59.998 52.381 0.00 0.00 0.00 2.01
1218 1241 6.719370 TGTTCCCCCAATATATTACTCAATGC 59.281 38.462 0.00 0.00 0.00 3.56
1225 1248 7.223582 CCCAATATATTACTCAATGCGAGCTAG 59.776 40.741 0.00 0.00 46.63 3.42
1226 1249 7.976175 CCAATATATTACTCAATGCGAGCTAGA 59.024 37.037 0.00 0.00 46.63 2.43
1227 1250 9.018716 CAATATATTACTCAATGCGAGCTAGAG 57.981 37.037 0.00 3.91 46.63 2.43
1366 1391 5.350365 GCAGTACAGTGTTTTCGGATCAATA 59.650 40.000 0.00 0.00 0.00 1.90
1368 1393 6.590292 CAGTACAGTGTTTTCGGATCAATACT 59.410 38.462 0.00 0.00 0.00 2.12
1376 1401 4.729227 TTCGGATCAATACTACAGTGCA 57.271 40.909 0.00 0.00 0.00 4.57
1390 1415 7.698506 ACTACAGTGCAGTATAGTTAGTCAA 57.301 36.000 6.67 0.00 0.00 3.18
1394 1419 6.818644 ACAGTGCAGTATAGTTAGTCAAATGG 59.181 38.462 0.00 0.00 0.00 3.16
1398 1423 8.338259 GTGCAGTATAGTTAGTCAAATGGAATG 58.662 37.037 0.00 0.00 0.00 2.67
1400 1425 8.552034 GCAGTATAGTTAGTCAAATGGAATGTC 58.448 37.037 0.00 0.00 0.00 3.06
1417 1442 5.382618 AATGTCAGGAAGCTTGTGATTTC 57.617 39.130 2.10 0.00 0.00 2.17
1426 1451 5.579511 GGAAGCTTGTGATTTCATGGATTTG 59.420 40.000 2.10 0.00 0.00 2.32
1436 1461 9.643693 GTGATTTCATGGATTTGTACTTTTGAT 57.356 29.630 0.00 0.00 0.00 2.57
1451 1476 5.464168 ACTTTTGATTGTATGCTTGTCTGC 58.536 37.500 0.00 0.00 0.00 4.26
1455 1480 4.074259 TGATTGTATGCTTGTCTGCTGTT 58.926 39.130 0.00 0.00 0.00 3.16
1494 1522 5.756195 TTGGATTAATCTGCATTCCTTCG 57.244 39.130 14.95 0.00 0.00 3.79
1495 1523 4.136796 TGGATTAATCTGCATTCCTTCGG 58.863 43.478 14.95 0.00 0.00 4.30
1496 1524 4.141505 TGGATTAATCTGCATTCCTTCGGA 60.142 41.667 14.95 0.00 0.00 4.55
1497 1525 4.821805 GGATTAATCTGCATTCCTTCGGAA 59.178 41.667 14.95 0.00 46.39 4.30
1519 1547 2.299867 GGTGGGATGCAATTTTGACAGT 59.700 45.455 0.00 0.00 0.00 3.55
1520 1548 3.244181 GGTGGGATGCAATTTTGACAGTT 60.244 43.478 0.00 0.00 0.00 3.16
1526 1554 4.389890 TGCAATTTTGACAGTTTGAGCT 57.610 36.364 0.00 0.00 0.00 4.09
1551 1579 2.288395 ACACAGCCAAAGTGCTATTTGC 60.288 45.455 8.24 5.20 40.32 3.68
1585 1613 3.627577 TGACACCTTTCTCACTTGAAAGC 59.372 43.478 10.45 0.41 46.78 3.51
1636 1664 2.695147 GGCATGGTTATCTTTTGGGAGG 59.305 50.000 0.00 0.00 0.00 4.30
1642 1670 3.885901 GGTTATCTTTTGGGAGGATCTGC 59.114 47.826 0.00 0.00 33.73 4.26
1697 1725 5.067153 TCCTTTTTGTTGGTACAGTCATGTG 59.933 40.000 0.00 0.00 42.39 3.21
1727 1755 1.278985 TGGTGCTTGTGCTACTGCTAT 59.721 47.619 0.00 0.00 40.48 2.97
1737 1765 5.292765 TGTGCTACTGCTATCTATTTGCTC 58.707 41.667 0.00 0.00 40.48 4.26
1741 1769 5.350914 GCTACTGCTATCTATTTGCTCCATG 59.649 44.000 0.00 0.00 36.03 3.66
1756 1784 3.428045 GCTCCATGGTTGCACTTGTTATC 60.428 47.826 21.45 0.00 0.00 1.75
1757 1785 4.012374 CTCCATGGTTGCACTTGTTATCT 58.988 43.478 12.58 0.00 0.00 1.98
1758 1786 5.172687 TCCATGGTTGCACTTGTTATCTA 57.827 39.130 12.58 0.00 0.00 1.98
1759 1787 4.941263 TCCATGGTTGCACTTGTTATCTAC 59.059 41.667 12.58 0.00 0.00 2.59
1760 1788 4.943705 CCATGGTTGCACTTGTTATCTACT 59.056 41.667 2.57 0.00 0.00 2.57
1761 1789 5.065218 CCATGGTTGCACTTGTTATCTACTC 59.935 44.000 2.57 0.00 0.00 2.59
1762 1790 4.575885 TGGTTGCACTTGTTATCTACTCC 58.424 43.478 0.00 0.00 0.00 3.85
1763 1791 3.939592 GGTTGCACTTGTTATCTACTCCC 59.060 47.826 0.00 0.00 0.00 4.30
1764 1792 4.323562 GGTTGCACTTGTTATCTACTCCCT 60.324 45.833 0.00 0.00 0.00 4.20
1765 1793 4.737855 TGCACTTGTTATCTACTCCCTC 57.262 45.455 0.00 0.00 0.00 4.30
1766 1794 4.353777 TGCACTTGTTATCTACTCCCTCT 58.646 43.478 0.00 0.00 0.00 3.69
1767 1795 4.160439 TGCACTTGTTATCTACTCCCTCTG 59.840 45.833 0.00 0.00 0.00 3.35
1768 1796 4.160626 GCACTTGTTATCTACTCCCTCTGT 59.839 45.833 0.00 0.00 0.00 3.41
1769 1797 5.337652 GCACTTGTTATCTACTCCCTCTGTT 60.338 44.000 0.00 0.00 0.00 3.16
1770 1798 6.334202 CACTTGTTATCTACTCCCTCTGTTC 58.666 44.000 0.00 0.00 0.00 3.18
1771 1799 5.422650 ACTTGTTATCTACTCCCTCTGTTCC 59.577 44.000 0.00 0.00 0.00 3.62
1772 1800 5.208294 TGTTATCTACTCCCTCTGTTCCT 57.792 43.478 0.00 0.00 0.00 3.36
1773 1801 6.337185 TGTTATCTACTCCCTCTGTTCCTA 57.663 41.667 0.00 0.00 0.00 2.94
1774 1802 6.738635 TGTTATCTACTCCCTCTGTTCCTAA 58.261 40.000 0.00 0.00 0.00 2.69
1775 1803 7.186972 TGTTATCTACTCCCTCTGTTCCTAAA 58.813 38.462 0.00 0.00 0.00 1.85
1776 1804 7.844779 TGTTATCTACTCCCTCTGTTCCTAAAT 59.155 37.037 0.00 0.00 0.00 1.40
1777 1805 9.364653 GTTATCTACTCCCTCTGTTCCTAAATA 57.635 37.037 0.00 0.00 0.00 1.40
1781 1809 9.589461 TCTACTCCCTCTGTTCCTAAATATAAG 57.411 37.037 0.00 0.00 0.00 1.73
1782 1810 9.369672 CTACTCCCTCTGTTCCTAAATATAAGT 57.630 37.037 0.00 0.00 0.00 2.24
1783 1811 8.252624 ACTCCCTCTGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
1784 1812 8.068733 ACTCCCTCTGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
1785 1813 8.855804 TCCCTCTGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
1786 1814 9.280456 TCCCTCTGTTCCTAAATATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
1787 1815 9.907229 CCCTCTGTTCCTAAATATAAGTCTTTT 57.093 33.333 0.00 0.00 0.00 2.27
1805 1833 9.750125 AAGTCTTTTTAGACATTTCAAATGGAC 57.250 29.630 14.70 8.92 41.02 4.02
1806 1834 9.136323 AGTCTTTTTAGACATTTCAAATGGACT 57.864 29.630 14.70 14.18 41.02 3.85
1811 1839 9.959749 TTTTAGACATTTCAAATGGACTACAAC 57.040 29.630 14.70 0.00 0.00 3.32
1812 1840 8.684386 TTAGACATTTCAAATGGACTACAACA 57.316 30.769 14.70 1.25 0.00 3.33
1813 1841 7.765695 AGACATTTCAAATGGACTACAACAT 57.234 32.000 14.70 0.00 0.00 2.71
1814 1842 8.862325 AGACATTTCAAATGGACTACAACATA 57.138 30.769 14.70 0.00 0.00 2.29
1815 1843 8.730680 AGACATTTCAAATGGACTACAACATAC 58.269 33.333 14.70 0.00 0.00 2.39
1816 1844 8.402798 ACATTTCAAATGGACTACAACATACA 57.597 30.769 14.70 0.00 0.00 2.29
1817 1845 9.023962 ACATTTCAAATGGACTACAACATACAT 57.976 29.630 14.70 0.00 0.00 2.29
1818 1846 9.507280 CATTTCAAATGGACTACAACATACATC 57.493 33.333 1.73 0.00 0.00 3.06
1819 1847 7.624360 TTCAAATGGACTACAACATACATCC 57.376 36.000 0.00 0.00 0.00 3.51
1820 1848 5.815222 TCAAATGGACTACAACATACATCCG 59.185 40.000 0.00 0.00 0.00 4.18
1821 1849 3.173668 TGGACTACAACATACATCCGC 57.826 47.619 0.00 0.00 0.00 5.54
1822 1850 2.498078 TGGACTACAACATACATCCGCA 59.502 45.455 0.00 0.00 0.00 5.69
1823 1851 3.133901 TGGACTACAACATACATCCGCAT 59.866 43.478 0.00 0.00 0.00 4.73
1824 1852 3.494626 GGACTACAACATACATCCGCATG 59.505 47.826 0.00 0.00 35.92 4.06
1825 1853 4.119862 GACTACAACATACATCCGCATGT 58.880 43.478 0.00 0.00 45.73 3.21
1827 1855 5.289595 ACTACAACATACATCCGCATGTAG 58.710 41.667 5.28 8.12 46.52 2.74
1828 1856 4.400529 ACAACATACATCCGCATGTAGA 57.599 40.909 5.28 0.00 46.52 2.59
1829 1857 4.119862 ACAACATACATCCGCATGTAGAC 58.880 43.478 5.28 0.00 46.52 2.59
1830 1858 4.119136 CAACATACATCCGCATGTAGACA 58.881 43.478 5.28 0.00 46.52 3.41
1831 1859 4.607293 ACATACATCCGCATGTAGACAT 57.393 40.909 5.28 0.00 46.52 3.06
1832 1860 5.722021 ACATACATCCGCATGTAGACATA 57.278 39.130 5.28 0.00 46.52 2.29
1833 1861 6.286240 ACATACATCCGCATGTAGACATAT 57.714 37.500 5.28 0.00 46.52 1.78
1834 1862 6.701340 ACATACATCCGCATGTAGACATATT 58.299 36.000 5.28 0.00 46.52 1.28
1835 1863 7.161404 ACATACATCCGCATGTAGACATATTT 58.839 34.615 5.28 0.00 46.52 1.40
1836 1864 7.661437 ACATACATCCGCATGTAGACATATTTT 59.339 33.333 5.28 0.00 46.52 1.82
1837 1865 9.150348 CATACATCCGCATGTAGACATATTTTA 57.850 33.333 5.28 0.00 46.52 1.52
1838 1866 7.658179 ACATCCGCATGTAGACATATTTTAG 57.342 36.000 0.00 0.00 41.81 1.85
1839 1867 7.441836 ACATCCGCATGTAGACATATTTTAGA 58.558 34.615 0.00 0.00 41.81 2.10
1840 1868 7.600375 ACATCCGCATGTAGACATATTTTAGAG 59.400 37.037 0.00 0.00 41.81 2.43
1841 1869 5.926542 TCCGCATGTAGACATATTTTAGAGC 59.073 40.000 0.00 0.00 34.26 4.09
1842 1870 5.164051 CCGCATGTAGACATATTTTAGAGCG 60.164 44.000 10.85 10.85 36.61 5.03
1843 1871 5.402568 CGCATGTAGACATATTTTAGAGCGT 59.597 40.000 10.02 0.00 34.11 5.07
1844 1872 6.581166 CGCATGTAGACATATTTTAGAGCGTA 59.419 38.462 10.02 0.00 34.11 4.42
1845 1873 7.201274 CGCATGTAGACATATTTTAGAGCGTAG 60.201 40.741 10.02 0.00 34.11 3.51
1846 1874 7.808381 GCATGTAGACATATTTTAGAGCGTAGA 59.192 37.037 0.00 0.00 34.26 2.59
1847 1875 9.847706 CATGTAGACATATTTTAGAGCGTAGAT 57.152 33.333 0.00 0.00 34.26 1.98
1849 1877 9.894783 TGTAGACATATTTTAGAGCGTAGATTC 57.105 33.333 0.00 0.00 0.00 2.52
1850 1878 9.894783 GTAGACATATTTTAGAGCGTAGATTCA 57.105 33.333 0.00 0.00 0.00 2.57
1851 1879 8.804688 AGACATATTTTAGAGCGTAGATTCAC 57.195 34.615 0.00 0.00 0.00 3.18
1852 1880 8.634444 AGACATATTTTAGAGCGTAGATTCACT 58.366 33.333 0.00 0.00 0.00 3.41
1853 1881 8.804688 ACATATTTTAGAGCGTAGATTCACTC 57.195 34.615 0.00 0.00 0.00 3.51
1854 1882 8.414003 ACATATTTTAGAGCGTAGATTCACTCA 58.586 33.333 0.00 0.00 0.00 3.41
1855 1883 9.416794 CATATTTTAGAGCGTAGATTCACTCAT 57.583 33.333 0.00 0.00 0.00 2.90
1856 1884 9.988815 ATATTTTAGAGCGTAGATTCACTCATT 57.011 29.630 0.00 0.00 0.00 2.57
1857 1885 8.723942 ATTTTAGAGCGTAGATTCACTCATTT 57.276 30.769 0.00 0.00 0.00 2.32
1858 1886 8.547967 TTTTAGAGCGTAGATTCACTCATTTT 57.452 30.769 0.00 0.00 0.00 1.82
1859 1887 7.525688 TTAGAGCGTAGATTCACTCATTTTG 57.474 36.000 0.00 0.00 0.00 2.44
1860 1888 4.331168 AGAGCGTAGATTCACTCATTTTGC 59.669 41.667 0.00 0.00 0.00 3.68
1861 1889 4.256920 AGCGTAGATTCACTCATTTTGCT 58.743 39.130 0.00 0.00 0.00 3.91
1862 1890 4.331168 AGCGTAGATTCACTCATTTTGCTC 59.669 41.667 0.00 0.00 0.00 4.26
1863 1891 4.494855 GCGTAGATTCACTCATTTTGCTCC 60.495 45.833 0.00 0.00 0.00 4.70
1864 1892 4.259970 CGTAGATTCACTCATTTTGCTCCG 60.260 45.833 0.00 0.00 0.00 4.63
1865 1893 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
1866 1894 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
1867 1895 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
1868 1896 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
1869 1897 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
1870 1898 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
1871 1899 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
1872 1900 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
1873 1901 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
1874 1902 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
1875 1903 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
1876 1904 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
1877 1905 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
1878 1906 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
1879 1907 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
1880 1908 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
1881 1909 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
1882 1910 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
1883 1911 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
1884 1912 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
1885 1913 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
1886 1914 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
1887 1915 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
1888 1916 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
1889 1917 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
1890 1918 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
1891 1919 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
1892 1920 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
1893 1921 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
1894 1922 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
1895 1923 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
1896 1924 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
1897 1925 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
1898 1926 8.424918 TCACTTGTTGAAATCTCTAGAAAGACT 58.575 33.333 0.00 0.00 0.00 3.24
1899 1927 9.050601 CACTTGTTGAAATCTCTAGAAAGACTT 57.949 33.333 0.00 0.00 0.00 3.01
1916 1944 8.422566 AGAAAGACTTATATTTAGGAACGGAGG 58.577 37.037 0.00 0.00 0.00 4.30
1917 1945 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1918 1946 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
1919 1947 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1920 1948 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
1921 1949 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
1922 1950 7.954620 ACTTATATTTAGGAACGGAGGGAGTAT 59.045 37.037 0.00 0.00 0.00 2.12
1923 1951 9.471702 CTTATATTTAGGAACGGAGGGAGTATA 57.528 37.037 0.00 0.00 0.00 1.47
1924 1952 9.827198 TTATATTTAGGAACGGAGGGAGTATAA 57.173 33.333 0.00 0.00 0.00 0.98
1925 1953 6.667558 ATTTAGGAACGGAGGGAGTATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1926 1954 3.967467 AGGAACGGAGGGAGTATAAGA 57.033 47.619 0.00 0.00 0.00 2.10
1927 1955 4.472690 AGGAACGGAGGGAGTATAAGAT 57.527 45.455 0.00 0.00 0.00 2.40
1928 1956 5.595814 AGGAACGGAGGGAGTATAAGATA 57.404 43.478 0.00 0.00 0.00 1.98
1929 1957 6.155247 AGGAACGGAGGGAGTATAAGATAT 57.845 41.667 0.00 0.00 0.00 1.63
1932 1960 6.039605 GGAACGGAGGGAGTATAAGATATAGC 59.960 46.154 0.00 0.00 0.00 2.97
1938 1966 8.581578 GGAGGGAGTATAAGATATAGCTATTGC 58.418 40.741 12.39 4.53 40.05 3.56
1961 1990 5.125417 GCTATTGTCATTCCCTTGCTTTACA 59.875 40.000 0.00 0.00 0.00 2.41
1971 2000 6.121776 TCCCTTGCTTTACATGAGAAGTTA 57.878 37.500 0.00 0.00 0.00 2.24
2174 2206 4.776322 CCCATTGCGCGGAGACCA 62.776 66.667 8.83 0.00 0.00 4.02
2179 2211 2.842394 ATTGCGCGGAGACCAGACAG 62.842 60.000 8.83 0.00 0.00 3.51
2282 2314 6.560687 TCCAGTATGATATTGACATTACCCCA 59.439 38.462 0.00 0.00 39.69 4.96
2348 2380 9.787532 CTTGTTCAAGAAAATTCAAGTGTTCTA 57.212 29.630 6.71 0.00 30.24 2.10
2420 2452 2.439507 TGAGTTTCAGGAGAACAAGGCT 59.560 45.455 0.00 0.00 32.39 4.58
2449 2481 2.086869 CGTCAATCTCCCAGTTGCATT 58.913 47.619 0.00 0.00 0.00 3.56
2480 2512 7.710907 CGATGTCCAGTAGATAAAAAGAATGGA 59.289 37.037 0.00 0.00 33.33 3.41
2537 2569 4.141287 AGGTGAACATTCGATTGGTTTCA 58.859 39.130 11.67 9.87 0.00 2.69
2579 2611 9.099454 GACTTGAATAAGTATTTGACCGAAGAT 57.901 33.333 0.00 0.00 46.79 2.40
2597 2629 5.277683 CGAAGATAAGGATGGCATTTCACTG 60.278 44.000 0.00 0.00 0.00 3.66
2657 2689 2.158475 AGAAGGTGCCATGGAAAGTTCA 60.158 45.455 18.40 0.00 0.00 3.18
2774 2806 1.692411 GACCAACCAAGCAAGGTCTT 58.308 50.000 0.00 0.00 45.46 3.01
2819 2851 1.446792 AGCATTCCACGAGAGCACG 60.447 57.895 0.00 0.00 39.31 5.34
2829 2861 1.493950 CGAGAGCACGGGCATGATTC 61.494 60.000 14.57 0.00 44.61 2.52
2831 2863 0.254178 AGAGCACGGGCATGATTCTT 59.746 50.000 14.57 0.00 44.61 2.52
2870 2902 4.771114 TGACTTCTTGAAGGACCTTTCA 57.229 40.909 8.49 3.27 35.38 2.69
2880 2912 6.147864 TGAAGGACCTTTCACATCAAAAAG 57.852 37.500 8.49 0.00 32.39 2.27
3120 3152 0.179119 GCCATGCTTGCAGATTGGTC 60.179 55.000 13.22 4.75 0.00 4.02
3242 3274 2.574018 GGGGTGCCAAAGACCAAGC 61.574 63.158 0.00 0.00 34.89 4.01
3423 3456 9.495572 GCAGATTTAATCATAGCTACCTTACTT 57.504 33.333 7.74 0.00 0.00 2.24
3703 3736 1.267121 ACCAGCTATCAAGTCGGTGT 58.733 50.000 0.00 0.00 0.00 4.16
3763 3796 0.101219 GCCCATTGTTTGAGCGGATC 59.899 55.000 0.00 0.00 0.00 3.36
3802 3835 4.156739 CCTGGCATTTTGGAGAGTAAACTC 59.843 45.833 1.72 1.72 43.17 3.01
4009 4042 0.998928 TGAATGCTAAGCTTGGGGGA 59.001 50.000 9.86 0.74 0.00 4.81
4027 4060 2.952310 GGGATGCAATGTTTCCCTCTAC 59.048 50.000 14.10 0.00 44.86 2.59
4042 4075 0.677731 TCTACAACAGCCTGCCATGC 60.678 55.000 0.00 0.00 0.00 4.06
4045 4078 2.678934 AACAGCCTGCCATGCCAG 60.679 61.111 0.00 0.00 0.00 4.85
4051 4084 1.831286 CCTGCCATGCCAGATTCCC 60.831 63.158 5.00 0.00 34.77 3.97
4126 4159 1.228033 TCACCCACTCGACGACTCA 60.228 57.895 0.00 0.00 0.00 3.41
4132 4165 2.202492 CTCGACGACTCAAGCCCG 60.202 66.667 0.00 0.00 0.00 6.13
4162 4195 1.133025 GCCGTAGTTGCAAGCATGAAT 59.867 47.619 0.00 0.00 0.00 2.57
4204 4237 1.039785 TCTCCAGGATGAGGTCGCAG 61.040 60.000 0.00 0.00 39.69 5.18
4261 4294 2.245159 TGACTGGTGAACTGCTTGAG 57.755 50.000 0.00 0.00 0.00 3.02
4291 4324 0.480252 AAGAAGTTGGCAAGCTCCCT 59.520 50.000 0.00 0.00 0.00 4.20
4678 4711 5.011090 TGATACACAATCTCTGCTACACC 57.989 43.478 0.00 0.00 35.45 4.16
4841 4874 4.530857 CGACGCCCCTGCCTAAGG 62.531 72.222 0.00 0.00 46.94 2.69
4897 4937 0.182061 GATGCTCTGCCTTGGATCCA 59.818 55.000 11.44 11.44 0.00 3.41
4910 4951 5.111293 CCTTGGATCCAATGTATTTTGCAC 58.889 41.667 27.20 0.00 35.20 4.57
5064 5109 6.680055 GCATTATGCAAAATTCTGATACCG 57.320 37.500 12.80 0.00 44.26 4.02
5221 5266 1.229951 ATCTCCAACTCTGGCCCCA 60.230 57.895 0.00 0.00 43.17 4.96
5226 5271 1.132881 TCCAACTCTGGCCCCAAAATT 60.133 47.619 0.00 0.00 43.17 1.82
5247 5301 2.288948 TGGACACCTTATTTGTACGCGT 60.289 45.455 19.17 19.17 29.35 6.01
5259 5313 2.065512 TGTACGCGTACTAGTTCACGA 58.934 47.619 39.69 20.53 40.56 4.35
5274 5330 1.605738 ACGAAGTGGTACGGGAGCT 60.606 57.895 0.00 0.00 42.51 4.09
5281 5337 2.590092 GTACGGGAGCTGGCCATT 59.410 61.111 5.51 0.00 0.00 3.16
5291 5347 1.518774 CTGGCCATTCAACCATGCC 59.481 57.895 5.51 0.00 34.82 4.40
5293 5349 2.495866 GCCATTCAACCATGCCCG 59.504 61.111 0.00 0.00 0.00 6.13
5294 5350 2.495866 CCATTCAACCATGCCCGC 59.504 61.111 0.00 0.00 0.00 6.13
5295 5351 2.349672 CCATTCAACCATGCCCGCA 61.350 57.895 0.00 0.00 0.00 5.69
5296 5352 1.678598 CCATTCAACCATGCCCGCAT 61.679 55.000 0.00 0.00 37.08 4.73
5297 5353 1.031235 CATTCAACCATGCCCGCATA 58.969 50.000 1.04 0.00 34.91 3.14
5298 5354 1.032014 ATTCAACCATGCCCGCATAC 58.968 50.000 1.04 0.00 34.91 2.39
5299 5355 0.322906 TTCAACCATGCCCGCATACA 60.323 50.000 1.04 0.00 34.91 2.29
5300 5356 0.106769 TCAACCATGCCCGCATACAT 60.107 50.000 1.04 0.00 34.91 2.29
5301 5357 0.746063 CAACCATGCCCGCATACATT 59.254 50.000 1.04 0.00 34.91 2.71
5302 5358 1.136695 CAACCATGCCCGCATACATTT 59.863 47.619 1.04 0.00 34.91 2.32
5303 5359 1.032014 ACCATGCCCGCATACATTTC 58.968 50.000 1.04 0.00 34.91 2.17
5304 5360 1.031235 CCATGCCCGCATACATTTCA 58.969 50.000 1.04 0.00 34.91 2.69
5305 5361 1.408340 CCATGCCCGCATACATTTCAA 59.592 47.619 1.04 0.00 34.91 2.69
5306 5362 2.544277 CCATGCCCGCATACATTTCAAG 60.544 50.000 1.04 0.00 34.91 3.02
5307 5363 1.102154 TGCCCGCATACATTTCAAGG 58.898 50.000 0.00 0.00 0.00 3.61
5308 5364 0.385390 GCCCGCATACATTTCAAGGG 59.615 55.000 0.00 0.00 40.27 3.95
5309 5365 2.021723 GCCCGCATACATTTCAAGGGA 61.022 52.381 1.26 0.00 39.71 4.20
5310 5366 1.949525 CCCGCATACATTTCAAGGGAG 59.050 52.381 0.00 0.00 39.71 4.30
5311 5367 1.334869 CCGCATACATTTCAAGGGAGC 59.665 52.381 0.00 0.00 0.00 4.70
5312 5368 2.292267 CGCATACATTTCAAGGGAGCT 58.708 47.619 0.00 0.00 0.00 4.09
5313 5369 2.289002 CGCATACATTTCAAGGGAGCTC 59.711 50.000 4.71 4.71 0.00 4.09
5314 5370 2.620585 GCATACATTTCAAGGGAGCTCC 59.379 50.000 25.59 25.59 0.00 4.70
5315 5371 2.691409 TACATTTCAAGGGAGCTCCG 57.309 50.000 26.36 13.13 41.52 4.63
5316 5372 0.678048 ACATTTCAAGGGAGCTCCGC 60.678 55.000 26.36 18.59 41.52 5.54
5317 5373 0.677731 CATTTCAAGGGAGCTCCGCA 60.678 55.000 26.36 7.07 41.52 5.69
5318 5374 0.257039 ATTTCAAGGGAGCTCCGCAT 59.743 50.000 26.36 12.18 41.52 4.73
5319 5375 0.908910 TTTCAAGGGAGCTCCGCATA 59.091 50.000 26.36 9.45 41.52 3.14
5320 5376 0.178068 TTCAAGGGAGCTCCGCATAC 59.822 55.000 26.36 12.17 41.52 2.39
5321 5377 0.975556 TCAAGGGAGCTCCGCATACA 60.976 55.000 26.36 5.19 41.52 2.29
5322 5378 0.107456 CAAGGGAGCTCCGCATACAT 59.893 55.000 26.36 2.08 41.52 2.29
5323 5379 0.839946 AAGGGAGCTCCGCATACATT 59.160 50.000 26.36 9.12 41.52 2.71
5324 5380 0.839946 AGGGAGCTCCGCATACATTT 59.160 50.000 26.36 0.00 41.52 2.32
5325 5381 1.202698 AGGGAGCTCCGCATACATTTC 60.203 52.381 26.36 8.39 41.52 2.17
5326 5382 1.475034 GGGAGCTCCGCATACATTTCA 60.475 52.381 26.36 0.00 36.71 2.69
5327 5383 2.288666 GGAGCTCCGCATACATTTCAA 58.711 47.619 19.06 0.00 0.00 2.69
5328 5384 2.289002 GGAGCTCCGCATACATTTCAAG 59.711 50.000 19.06 0.00 0.00 3.02
5329 5385 2.289002 GAGCTCCGCATACATTTCAAGG 59.711 50.000 0.87 0.00 0.00 3.61
5330 5386 2.092968 AGCTCCGCATACATTTCAAGGA 60.093 45.455 0.00 0.00 0.00 3.36
5331 5387 2.682856 GCTCCGCATACATTTCAAGGAA 59.317 45.455 0.00 0.00 0.00 3.36
5332 5388 3.242870 GCTCCGCATACATTTCAAGGAAG 60.243 47.826 0.00 0.00 0.00 3.46
5333 5389 2.682856 TCCGCATACATTTCAAGGAAGC 59.317 45.455 0.00 0.00 0.00 3.86
5334 5390 2.223572 CCGCATACATTTCAAGGAAGCC 60.224 50.000 0.00 0.00 0.00 4.35
5335 5391 2.539547 CGCATACATTTCAAGGAAGCCG 60.540 50.000 0.00 0.00 0.00 5.52
5336 5392 2.223572 GCATACATTTCAAGGAAGCCGG 60.224 50.000 0.00 0.00 0.00 6.13
5337 5393 1.459450 TACATTTCAAGGAAGCCGGC 58.541 50.000 21.89 21.89 0.00 6.13
5338 5394 1.250840 ACATTTCAAGGAAGCCGGCC 61.251 55.000 26.15 8.83 0.00 6.13
5339 5395 1.076549 ATTTCAAGGAAGCCGGCCA 59.923 52.632 26.15 0.00 0.00 5.36
5340 5396 0.324645 ATTTCAAGGAAGCCGGCCAT 60.325 50.000 26.15 13.52 0.00 4.40
5341 5397 0.541764 TTTCAAGGAAGCCGGCCATT 60.542 50.000 26.15 12.68 0.00 3.16
5342 5398 0.965363 TTCAAGGAAGCCGGCCATTC 60.965 55.000 26.15 21.22 0.00 2.67
5343 5399 1.678635 CAAGGAAGCCGGCCATTCA 60.679 57.895 26.15 0.00 0.00 2.57
5344 5400 1.076549 AAGGAAGCCGGCCATTCAA 59.923 52.632 26.15 0.00 0.00 2.69
5345 5401 1.250840 AAGGAAGCCGGCCATTCAAC 61.251 55.000 26.15 9.56 0.00 3.18
5346 5402 2.710902 GGAAGCCGGCCATTCAACC 61.711 63.158 26.15 12.28 0.00 3.77
5347 5403 1.976474 GAAGCCGGCCATTCAACCA 60.976 57.895 26.15 0.00 0.00 3.67
5348 5404 1.305213 AAGCCGGCCATTCAACCAT 60.305 52.632 26.15 0.00 0.00 3.55
5349 5405 1.606885 AAGCCGGCCATTCAACCATG 61.607 55.000 26.15 0.00 0.00 3.66
5350 5406 2.495866 CCGGCCATTCAACCATGC 59.504 61.111 2.24 0.00 0.00 4.06
5351 5407 2.495866 CGGCCATTCAACCATGCC 59.504 61.111 2.24 0.00 0.00 4.40
5352 5408 2.902584 GGCCATTCAACCATGCCC 59.097 61.111 0.00 0.00 0.00 5.36
5353 5409 2.495866 GCCATTCAACCATGCCCG 59.504 61.111 0.00 0.00 0.00 6.13
5354 5410 2.495866 CCATTCAACCATGCCCGC 59.504 61.111 0.00 0.00 0.00 6.13
5355 5411 2.349672 CCATTCAACCATGCCCGCA 61.350 57.895 0.00 0.00 0.00 5.69
5356 5412 1.678598 CCATTCAACCATGCCCGCAT 61.679 55.000 0.00 0.00 37.08 4.73
5357 5413 1.031235 CATTCAACCATGCCCGCATA 58.969 50.000 1.04 0.00 34.91 3.14
5358 5414 1.032014 ATTCAACCATGCCCGCATAC 58.968 50.000 1.04 0.00 34.91 2.39
5359 5415 0.322906 TTCAACCATGCCCGCATACA 60.323 50.000 1.04 0.00 34.91 2.29
5360 5416 0.106769 TCAACCATGCCCGCATACAT 60.107 50.000 1.04 0.00 34.91 2.29
5361 5417 0.746063 CAACCATGCCCGCATACATT 59.254 50.000 1.04 0.00 34.91 2.71
5362 5418 1.136695 CAACCATGCCCGCATACATTT 59.863 47.619 1.04 0.00 34.91 2.32
5363 5419 1.032014 ACCATGCCCGCATACATTTC 58.968 50.000 1.04 0.00 34.91 2.17
5364 5420 1.031235 CCATGCCCGCATACATTTCA 58.969 50.000 1.04 0.00 34.91 2.69
5365 5421 1.408340 CCATGCCCGCATACATTTCAA 59.592 47.619 1.04 0.00 34.91 2.69
5366 5422 2.544277 CCATGCCCGCATACATTTCAAG 60.544 50.000 1.04 0.00 34.91 3.02
5367 5423 1.102154 TGCCCGCATACATTTCAAGG 58.898 50.000 0.00 0.00 0.00 3.61
5368 5424 0.385390 GCCCGCATACATTTCAAGGG 59.615 55.000 0.00 0.00 40.27 3.95
5369 5425 2.021723 GCCCGCATACATTTCAAGGGA 61.022 52.381 1.26 0.00 39.71 4.20
5370 5426 1.949525 CCCGCATACATTTCAAGGGAG 59.050 52.381 0.00 0.00 39.71 4.30
5371 5427 1.334869 CCGCATACATTTCAAGGGAGC 59.665 52.381 0.00 0.00 0.00 4.70
5372 5428 2.292267 CGCATACATTTCAAGGGAGCT 58.708 47.619 0.00 0.00 0.00 4.09
5373 5429 2.289002 CGCATACATTTCAAGGGAGCTC 59.711 50.000 4.71 4.71 0.00 4.09
5374 5430 2.620585 GCATACATTTCAAGGGAGCTCC 59.379 50.000 25.59 25.59 0.00 4.70
5375 5431 2.691409 TACATTTCAAGGGAGCTCCG 57.309 50.000 26.36 13.13 41.52 4.63
5376 5432 0.678048 ACATTTCAAGGGAGCTCCGC 60.678 55.000 26.36 18.59 41.52 5.54
5377 5433 0.677731 CATTTCAAGGGAGCTCCGCA 60.678 55.000 26.36 7.07 41.52 5.69
5378 5434 0.257039 ATTTCAAGGGAGCTCCGCAT 59.743 50.000 26.36 12.18 41.52 4.73
5379 5435 0.908910 TTTCAAGGGAGCTCCGCATA 59.091 50.000 26.36 9.45 41.52 3.14
5380 5436 0.178068 TTCAAGGGAGCTCCGCATAC 59.822 55.000 26.36 12.17 41.52 2.39
5381 5437 0.975556 TCAAGGGAGCTCCGCATACA 60.976 55.000 26.36 5.19 41.52 2.29
5382 5438 0.107456 CAAGGGAGCTCCGCATACAT 59.893 55.000 26.36 2.08 41.52 2.29
5383 5439 0.839946 AAGGGAGCTCCGCATACATT 59.160 50.000 26.36 9.12 41.52 2.71
5384 5440 0.839946 AGGGAGCTCCGCATACATTT 59.160 50.000 26.36 0.00 41.52 2.32
5385 5441 1.202698 AGGGAGCTCCGCATACATTTC 60.203 52.381 26.36 8.39 41.52 2.17
5386 5442 1.475034 GGGAGCTCCGCATACATTTCA 60.475 52.381 26.36 0.00 36.71 2.69
5387 5443 2.288666 GGAGCTCCGCATACATTTCAA 58.711 47.619 19.06 0.00 0.00 2.69
5388 5444 2.289002 GGAGCTCCGCATACATTTCAAG 59.711 50.000 19.06 0.00 0.00 3.02
5389 5445 2.289002 GAGCTCCGCATACATTTCAAGG 59.711 50.000 0.87 0.00 0.00 3.61
5390 5446 2.092968 AGCTCCGCATACATTTCAAGGA 60.093 45.455 0.00 0.00 0.00 3.36
5391 5447 2.682856 GCTCCGCATACATTTCAAGGAA 59.317 45.455 0.00 0.00 0.00 3.36
5392 5448 3.242870 GCTCCGCATACATTTCAAGGAAG 60.243 47.826 0.00 0.00 0.00 3.46
5393 5449 2.682856 TCCGCATACATTTCAAGGAAGC 59.317 45.455 0.00 0.00 0.00 3.86
5394 5450 2.223572 CCGCATACATTTCAAGGAAGCC 60.224 50.000 0.00 0.00 0.00 4.35
5395 5451 2.539547 CGCATACATTTCAAGGAAGCCG 60.540 50.000 0.00 0.00 0.00 5.52
5396 5452 2.223572 GCATACATTTCAAGGAAGCCGG 60.224 50.000 0.00 0.00 0.00 6.13
5397 5453 1.459450 TACATTTCAAGGAAGCCGGC 58.541 50.000 21.89 21.89 0.00 6.13
5398 5454 1.250840 ACATTTCAAGGAAGCCGGCC 61.251 55.000 26.15 8.83 0.00 6.13
5399 5455 1.076549 ATTTCAAGGAAGCCGGCCA 59.923 52.632 26.15 0.00 0.00 5.36
5400 5456 0.324645 ATTTCAAGGAAGCCGGCCAT 60.325 50.000 26.15 13.52 0.00 4.40
5401 5457 0.541764 TTTCAAGGAAGCCGGCCATT 60.542 50.000 26.15 12.68 0.00 3.16
5402 5458 0.965363 TTCAAGGAAGCCGGCCATTC 60.965 55.000 26.15 21.22 0.00 2.67
5403 5459 1.678635 CAAGGAAGCCGGCCATTCA 60.679 57.895 26.15 0.00 0.00 2.57
5404 5460 1.076549 AAGGAAGCCGGCCATTCAA 59.923 52.632 26.15 0.00 0.00 2.69
5405 5461 1.250840 AAGGAAGCCGGCCATTCAAC 61.251 55.000 26.15 9.56 0.00 3.18
5406 5462 2.710902 GGAAGCCGGCCATTCAACC 61.711 63.158 26.15 12.28 0.00 3.77
5407 5463 1.976474 GAAGCCGGCCATTCAACCA 60.976 57.895 26.15 0.00 0.00 3.67
5408 5464 1.305213 AAGCCGGCCATTCAACCAT 60.305 52.632 26.15 0.00 0.00 3.55
5409 5465 1.322538 AAGCCGGCCATTCAACCATC 61.323 55.000 26.15 0.00 0.00 3.51
5410 5466 2.785425 GCCGGCCATTCAACCATCC 61.785 63.158 18.11 0.00 0.00 3.51
5411 5467 2.127232 CCGGCCATTCAACCATCCC 61.127 63.158 2.24 0.00 0.00 3.85
5412 5468 2.127232 CGGCCATTCAACCATCCCC 61.127 63.158 2.24 0.00 0.00 4.81
5413 5469 2.127232 GGCCATTCAACCATCCCCG 61.127 63.158 0.00 0.00 0.00 5.73
5429 5485 1.821753 CCCCGCATACATTTCAAACCA 59.178 47.619 0.00 0.00 0.00 3.67
5434 5490 4.562394 CCGCATACATTTCAAACCACATTC 59.438 41.667 0.00 0.00 0.00 2.67
5445 5501 1.036707 ACCACATTCCAACAAACCGG 58.963 50.000 0.00 0.00 0.00 5.28
5455 5511 6.406692 TTCCAACAAACCGGATGAATTTTA 57.593 33.333 9.46 0.00 0.00 1.52
5458 5514 6.209589 TCCAACAAACCGGATGAATTTTATCA 59.790 34.615 9.46 0.00 0.00 2.15
5463 5519 8.093927 ACAAACCGGATGAATTTTATCAAACAT 58.906 29.630 9.46 0.00 32.06 2.71
5467 5523 7.093988 ACCGGATGAATTTTATCAAACATGACA 60.094 33.333 9.46 0.00 32.06 3.58
5521 5577 8.532977 AATAAAATGGCCGATATTTTGTATGC 57.467 30.769 18.05 0.00 38.01 3.14
5539 5596 3.231207 TGCTTTACTAAACCAAGCCCA 57.769 42.857 0.89 0.00 41.97 5.36
5543 5600 4.021456 GCTTTACTAAACCAAGCCCACAAT 60.021 41.667 0.00 0.00 37.54 2.71
5657 5714 7.221838 TGTTCAACAAGTTTTTCGAAATCATCC 59.778 33.333 12.12 0.00 0.00 3.51
5688 5745 5.401531 TTCAACGATACTAGAGCCAAAGT 57.598 39.130 0.00 0.00 0.00 2.66
5740 5797 1.872952 TGAGCTTCATCCAACAACGTG 59.127 47.619 0.00 0.00 0.00 4.49
5755 5812 2.255252 GTGTGTGCGTGAATGGCC 59.745 61.111 0.00 0.00 0.00 5.36
5758 5815 3.364441 TGTGCGTGAATGGCCTGC 61.364 61.111 3.32 0.00 0.00 4.85
5798 5858 3.850207 CAACACGTGCACGCTATAC 57.150 52.632 37.35 0.00 44.43 1.47
5800 5860 1.457683 CAACACGTGCACGCTATACAA 59.542 47.619 37.35 0.00 44.43 2.41
5802 5862 1.064582 CACGTGCACGCTATACAACA 58.935 50.000 37.35 0.00 44.43 3.33
5870 5935 2.743664 CAACATGAAGCAACCGATCTCA 59.256 45.455 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
63 64 6.072286 AGCATGAAGGTCAAATGAACAGTAAG 60.072 38.462 0.00 0.00 33.22 2.34
79 80 6.603237 TCACGAACATAATAAGCATGAAGG 57.397 37.500 0.00 0.00 0.00 3.46
138 139 8.714179 TCTTTGCAGAATATTTGAGCAATTTTG 58.286 29.630 17.88 11.64 43.71 2.44
142 143 7.778083 TCATCTTTGCAGAATATTTGAGCAAT 58.222 30.769 17.88 6.60 43.71 3.56
145 146 8.644318 AAATCATCTTTGCAGAATATTTGAGC 57.356 30.769 0.00 0.00 31.19 4.26
157 158 8.886719 CAATAGAGTGTCTAAATCATCTTTGCA 58.113 33.333 0.00 0.00 31.96 4.08
158 159 9.102757 TCAATAGAGTGTCTAAATCATCTTTGC 57.897 33.333 0.00 0.00 31.96 3.68
187 188 7.771361 TCAAAACAACCTGTCATGAAAGTAGTA 59.229 33.333 12.03 0.00 0.00 1.82
188 189 6.601613 TCAAAACAACCTGTCATGAAAGTAGT 59.398 34.615 12.03 4.48 0.00 2.73
189 190 7.026631 TCAAAACAACCTGTCATGAAAGTAG 57.973 36.000 12.03 3.88 0.00 2.57
196 197 6.263516 AGATCATCAAAACAACCTGTCATG 57.736 37.500 0.00 0.00 0.00 3.07
243 244 9.778993 CTTGGAATATCTTCAATAGTTTGTGTG 57.221 33.333 0.00 0.00 34.32 3.82
273 274 0.179134 CTGCCTAGTCGTCTTTCCGG 60.179 60.000 0.00 0.00 0.00 5.14
378 379 3.599792 CTGCGCAAAACCGGAGCTG 62.600 63.158 13.05 2.29 39.69 4.24
557 563 1.264288 CTTCTTGTCGTGTTCTTGGGC 59.736 52.381 0.00 0.00 0.00 5.36
823 835 1.001268 CTGGATGATCGGGTACTGTCG 60.001 57.143 0.00 0.00 35.30 4.35
1112 1124 3.487120 AGTAACCGAGAAAAAGGTGCT 57.513 42.857 0.00 0.00 41.21 4.40
1191 1209 6.833346 TGAGTAATATATTGGGGGAACACA 57.167 37.500 8.28 0.00 46.89 3.72
1218 1241 5.862323 TGCAAGTAAAAACTACTCTAGCTCG 59.138 40.000 0.00 0.00 0.00 5.03
1225 1248 9.678941 AAAAATAGCTGCAAGTAAAAACTACTC 57.321 29.630 1.02 0.00 35.30 2.59
1366 1391 7.698506 TTGACTAACTATACTGCACTGTAGT 57.301 36.000 5.06 5.06 0.00 2.73
1368 1393 7.979537 CCATTTGACTAACTATACTGCACTGTA 59.020 37.037 0.00 0.00 0.00 2.74
1376 1401 9.823647 CTGACATTCCATTTGACTAACTATACT 57.176 33.333 0.00 0.00 0.00 2.12
1386 1411 3.760684 AGCTTCCTGACATTCCATTTGAC 59.239 43.478 0.00 0.00 0.00 3.18
1390 1415 3.508793 CACAAGCTTCCTGACATTCCATT 59.491 43.478 0.00 0.00 0.00 3.16
1394 1419 5.048504 TGAAATCACAAGCTTCCTGACATTC 60.049 40.000 15.93 15.93 0.00 2.67
1398 1423 4.380233 CCATGAAATCACAAGCTTCCTGAC 60.380 45.833 0.00 0.00 0.00 3.51
1400 1425 3.760151 TCCATGAAATCACAAGCTTCCTG 59.240 43.478 0.00 0.00 0.00 3.86
1417 1442 8.810427 GCATACAATCAAAAGTACAAATCCATG 58.190 33.333 0.00 0.00 0.00 3.66
1426 1451 6.524586 GCAGACAAGCATACAATCAAAAGTAC 59.475 38.462 0.00 0.00 0.00 2.73
1436 1461 2.813754 GGAACAGCAGACAAGCATACAA 59.186 45.455 0.00 0.00 36.85 2.41
1491 1519 0.331278 ATTGCATCCCACCTTCCGAA 59.669 50.000 0.00 0.00 0.00 4.30
1493 1521 1.185315 AAATTGCATCCCACCTTCCG 58.815 50.000 0.00 0.00 0.00 4.30
1494 1522 2.566724 TCAAAATTGCATCCCACCTTCC 59.433 45.455 0.00 0.00 0.00 3.46
1495 1523 3.006752 TGTCAAAATTGCATCCCACCTTC 59.993 43.478 0.00 0.00 0.00 3.46
1496 1524 2.971330 TGTCAAAATTGCATCCCACCTT 59.029 40.909 0.00 0.00 0.00 3.50
1497 1525 2.564062 CTGTCAAAATTGCATCCCACCT 59.436 45.455 0.00 0.00 0.00 4.00
1526 1554 0.181114 AGCACTTTGGCTGTGTCTCA 59.819 50.000 7.44 0.00 43.89 3.27
1540 1568 2.346803 CACAGTACCGCAAATAGCACT 58.653 47.619 0.00 0.00 46.13 4.40
1551 1579 0.895530 AGGTGTCATCCACAGTACCG 59.104 55.000 0.00 0.00 46.44 4.02
1573 1601 2.569404 AGGGGTCTAGCTTTCAAGTGAG 59.431 50.000 0.00 0.00 0.00 3.51
1576 1604 3.244946 GGAAAGGGGTCTAGCTTTCAAGT 60.245 47.826 17.16 0.00 37.50 3.16
1585 1613 2.112190 GAGGAGTGGAAAGGGGTCTAG 58.888 57.143 0.00 0.00 0.00 2.43
1616 1644 3.631250 TCCTCCCAAAAGATAACCATGC 58.369 45.455 0.00 0.00 0.00 4.06
1660 1688 8.325787 ACCAACAAAAAGGAAGAAAAGGTAATT 58.674 29.630 0.00 0.00 0.00 1.40
1668 1696 6.434652 TGACTGTACCAACAAAAAGGAAGAAA 59.565 34.615 0.00 0.00 34.49 2.52
1697 1725 2.736400 GCACAAGCACCAAGATAATGGC 60.736 50.000 0.00 0.00 44.75 4.40
1727 1755 2.754552 GTGCAACCATGGAGCAAATAGA 59.245 45.455 29.01 10.52 40.35 1.98
1737 1765 4.943705 AGTAGATAACAAGTGCAACCATGG 59.056 41.667 11.19 11.19 37.80 3.66
1741 1769 3.939592 GGGAGTAGATAACAAGTGCAACC 59.060 47.826 0.00 0.00 37.80 3.77
1756 1784 9.369672 ACTTATATTTAGGAACAGAGGGAGTAG 57.630 37.037 0.00 0.00 0.00 2.57
1757 1785 9.364653 GACTTATATTTAGGAACAGAGGGAGTA 57.635 37.037 0.00 0.00 0.00 2.59
1758 1786 8.068733 AGACTTATATTTAGGAACAGAGGGAGT 58.931 37.037 0.00 0.00 0.00 3.85
1759 1787 8.485578 AGACTTATATTTAGGAACAGAGGGAG 57.514 38.462 0.00 0.00 0.00 4.30
1760 1788 8.855804 AAGACTTATATTTAGGAACAGAGGGA 57.144 34.615 0.00 0.00 0.00 4.20
1761 1789 9.907229 AAAAGACTTATATTTAGGAACAGAGGG 57.093 33.333 0.00 0.00 0.00 4.30
1779 1807 9.750125 GTCCATTTGAAATGTCTAAAAAGACTT 57.250 29.630 15.93 0.00 39.41 3.01
1780 1808 9.136323 AGTCCATTTGAAATGTCTAAAAAGACT 57.864 29.630 15.93 14.21 39.41 3.24
1785 1813 9.959749 GTTGTAGTCCATTTGAAATGTCTAAAA 57.040 29.630 15.93 14.59 0.00 1.52
1786 1814 9.126151 TGTTGTAGTCCATTTGAAATGTCTAAA 57.874 29.630 15.93 10.39 0.00 1.85
1787 1815 8.684386 TGTTGTAGTCCATTTGAAATGTCTAA 57.316 30.769 15.93 4.89 0.00 2.10
1788 1816 8.862325 ATGTTGTAGTCCATTTGAAATGTCTA 57.138 30.769 15.93 13.97 0.00 2.59
1789 1817 7.765695 ATGTTGTAGTCCATTTGAAATGTCT 57.234 32.000 15.93 14.81 0.00 3.41
1790 1818 8.511321 TGTATGTTGTAGTCCATTTGAAATGTC 58.489 33.333 15.93 9.10 0.00 3.06
1791 1819 8.402798 TGTATGTTGTAGTCCATTTGAAATGT 57.597 30.769 15.93 1.43 0.00 2.71
1792 1820 9.507280 GATGTATGTTGTAGTCCATTTGAAATG 57.493 33.333 10.84 10.84 0.00 2.32
1793 1821 8.686334 GGATGTATGTTGTAGTCCATTTGAAAT 58.314 33.333 0.00 0.00 0.00 2.17
1794 1822 7.148323 CGGATGTATGTTGTAGTCCATTTGAAA 60.148 37.037 0.00 0.00 0.00 2.69
1795 1823 6.315144 CGGATGTATGTTGTAGTCCATTTGAA 59.685 38.462 0.00 0.00 0.00 2.69
1796 1824 5.815222 CGGATGTATGTTGTAGTCCATTTGA 59.185 40.000 0.00 0.00 0.00 2.69
1797 1825 5.504010 GCGGATGTATGTTGTAGTCCATTTG 60.504 44.000 0.00 0.00 0.00 2.32
1798 1826 4.574828 GCGGATGTATGTTGTAGTCCATTT 59.425 41.667 0.00 0.00 0.00 2.32
1799 1827 4.127171 GCGGATGTATGTTGTAGTCCATT 58.873 43.478 0.00 0.00 0.00 3.16
1800 1828 3.133901 TGCGGATGTATGTTGTAGTCCAT 59.866 43.478 0.00 0.00 0.00 3.41
1801 1829 2.498078 TGCGGATGTATGTTGTAGTCCA 59.502 45.455 0.00 0.00 0.00 4.02
1802 1830 3.173668 TGCGGATGTATGTTGTAGTCC 57.826 47.619 0.00 0.00 0.00 3.85
1803 1831 4.715520 CATGCGGATGTATGTTGTAGTC 57.284 45.455 9.01 0.00 33.95 2.59
1811 1839 7.601073 AAATATGTCTACATGCGGATGTATG 57.399 36.000 27.01 20.36 42.87 2.39
1812 1840 9.371136 CTAAAATATGTCTACATGCGGATGTAT 57.629 33.333 27.01 17.15 42.87 2.29
1813 1841 8.581578 TCTAAAATATGTCTACATGCGGATGTA 58.418 33.333 25.54 25.54 41.27 2.29
1814 1842 7.441836 TCTAAAATATGTCTACATGCGGATGT 58.558 34.615 26.09 26.09 45.24 3.06
1815 1843 7.412346 GCTCTAAAATATGTCTACATGCGGATG 60.412 40.741 16.07 16.07 37.15 3.51
1816 1844 6.591834 GCTCTAAAATATGTCTACATGCGGAT 59.408 38.462 5.85 0.00 37.15 4.18
1817 1845 5.926542 GCTCTAAAATATGTCTACATGCGGA 59.073 40.000 5.85 0.00 37.15 5.54
1818 1846 5.164051 CGCTCTAAAATATGTCTACATGCGG 60.164 44.000 5.85 0.00 37.15 5.69
1819 1847 5.402568 ACGCTCTAAAATATGTCTACATGCG 59.597 40.000 14.62 14.62 40.04 4.73
1820 1848 6.771188 ACGCTCTAAAATATGTCTACATGC 57.229 37.500 5.85 0.00 37.15 4.06
1821 1849 9.847706 ATCTACGCTCTAAAATATGTCTACATG 57.152 33.333 5.85 0.00 37.15 3.21
1823 1851 9.894783 GAATCTACGCTCTAAAATATGTCTACA 57.105 33.333 0.00 0.00 0.00 2.74
1824 1852 9.894783 TGAATCTACGCTCTAAAATATGTCTAC 57.105 33.333 0.00 0.00 0.00 2.59
1825 1853 9.894783 GTGAATCTACGCTCTAAAATATGTCTA 57.105 33.333 0.00 0.00 0.00 2.59
1826 1854 8.634444 AGTGAATCTACGCTCTAAAATATGTCT 58.366 33.333 0.00 0.00 0.00 3.41
1827 1855 8.804688 AGTGAATCTACGCTCTAAAATATGTC 57.195 34.615 0.00 0.00 0.00 3.06
1828 1856 8.414003 TGAGTGAATCTACGCTCTAAAATATGT 58.586 33.333 0.00 0.00 44.58 2.29
1829 1857 8.803201 TGAGTGAATCTACGCTCTAAAATATG 57.197 34.615 0.00 0.00 44.58 1.78
1830 1858 9.988815 AATGAGTGAATCTACGCTCTAAAATAT 57.011 29.630 0.00 0.00 44.58 1.28
1831 1859 9.817809 AAATGAGTGAATCTACGCTCTAAAATA 57.182 29.630 0.00 0.00 44.58 1.40
1832 1860 8.723942 AAATGAGTGAATCTACGCTCTAAAAT 57.276 30.769 0.00 0.00 44.58 1.82
1833 1861 8.443160 CAAAATGAGTGAATCTACGCTCTAAAA 58.557 33.333 0.00 0.00 44.58 1.52
1834 1862 7.413000 GCAAAATGAGTGAATCTACGCTCTAAA 60.413 37.037 0.00 0.00 44.58 1.85
1835 1863 6.036083 GCAAAATGAGTGAATCTACGCTCTAA 59.964 38.462 0.00 0.00 44.58 2.10
1836 1864 5.520288 GCAAAATGAGTGAATCTACGCTCTA 59.480 40.000 0.00 0.00 44.58 2.43
1837 1865 4.331168 GCAAAATGAGTGAATCTACGCTCT 59.669 41.667 0.00 0.00 44.58 4.09
1838 1866 4.331168 AGCAAAATGAGTGAATCTACGCTC 59.669 41.667 0.00 0.00 44.55 5.03
1839 1867 4.256920 AGCAAAATGAGTGAATCTACGCT 58.743 39.130 0.00 0.00 0.00 5.07
1840 1868 4.494855 GGAGCAAAATGAGTGAATCTACGC 60.495 45.833 0.00 0.00 0.00 4.42
1841 1869 4.259970 CGGAGCAAAATGAGTGAATCTACG 60.260 45.833 0.00 0.00 0.00 3.51
1842 1870 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
1843 1871 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
1844 1872 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
1845 1873 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1846 1874 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
1847 1875 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
1848 1876 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
1849 1877 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
1850 1878 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
1851 1879 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
1852 1880 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
1853 1881 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
1854 1882 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
1855 1883 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
1856 1884 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
1857 1885 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
1858 1886 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
1859 1887 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
1860 1888 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
1861 1889 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
1862 1890 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
1863 1891 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
1864 1892 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
1866 1894 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
1867 1895 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
1868 1896 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
1869 1897 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
1870 1898 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
1871 1899 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
1872 1900 8.424918 AGTCTTTCTAGAGATTTCAACAAGTGA 58.575 33.333 0.00 0.00 0.00 3.41
1873 1901 8.600449 AGTCTTTCTAGAGATTTCAACAAGTG 57.400 34.615 0.00 0.00 0.00 3.16
1890 1918 8.422566 CCTCCGTTCCTAAATATAAGTCTTTCT 58.577 37.037 0.00 0.00 0.00 2.52
1891 1919 7.656542 CCCTCCGTTCCTAAATATAAGTCTTTC 59.343 40.741 0.00 0.00 0.00 2.62
1892 1920 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1893 1921 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1894 1922 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1895 1923 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1896 1924 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1897 1925 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1898 1926 9.827198 TTATACTCCCTCCGTTCCTAAATATAA 57.173 33.333 0.00 0.00 0.00 0.98
1899 1927 9.471702 CTTATACTCCCTCCGTTCCTAAATATA 57.528 37.037 0.00 0.00 0.00 0.86
1900 1928 8.175431 TCTTATACTCCCTCCGTTCCTAAATAT 58.825 37.037 0.00 0.00 0.00 1.28
1901 1929 7.529555 TCTTATACTCCCTCCGTTCCTAAATA 58.470 38.462 0.00 0.00 0.00 1.40
1902 1930 6.379579 TCTTATACTCCCTCCGTTCCTAAAT 58.620 40.000 0.00 0.00 0.00 1.40
1903 1931 5.769835 TCTTATACTCCCTCCGTTCCTAAA 58.230 41.667 0.00 0.00 0.00 1.85
1904 1932 5.393068 TCTTATACTCCCTCCGTTCCTAA 57.607 43.478 0.00 0.00 0.00 2.69
1905 1933 5.595814 ATCTTATACTCCCTCCGTTCCTA 57.404 43.478 0.00 0.00 0.00 2.94
1906 1934 3.967467 TCTTATACTCCCTCCGTTCCT 57.033 47.619 0.00 0.00 0.00 3.36
1907 1935 6.039605 GCTATATCTTATACTCCCTCCGTTCC 59.960 46.154 0.00 0.00 0.00 3.62
1908 1936 6.829811 AGCTATATCTTATACTCCCTCCGTTC 59.170 42.308 0.00 0.00 0.00 3.95
1909 1937 6.733509 AGCTATATCTTATACTCCCTCCGTT 58.266 40.000 0.00 0.00 0.00 4.44
1910 1938 6.330178 AGCTATATCTTATACTCCCTCCGT 57.670 41.667 0.00 0.00 0.00 4.69
1911 1939 8.788806 CAATAGCTATATCTTATACTCCCTCCG 58.211 40.741 6.68 0.00 0.00 4.63
1912 1940 8.581578 GCAATAGCTATATCTTATACTCCCTCC 58.418 40.741 6.68 0.00 37.91 4.30
1932 1960 5.533903 AGCAAGGGAATGACAATAGCAATAG 59.466 40.000 0.00 0.00 0.00 1.73
1938 1966 6.757897 TGTAAAGCAAGGGAATGACAATAG 57.242 37.500 0.00 0.00 0.00 1.73
1940 1968 5.716228 TCATGTAAAGCAAGGGAATGACAAT 59.284 36.000 0.00 0.00 0.00 2.71
1943 1971 4.943705 TCTCATGTAAAGCAAGGGAATGAC 59.056 41.667 0.00 0.00 0.00 3.06
1950 1978 7.856145 AGATAACTTCTCATGTAAAGCAAGG 57.144 36.000 8.97 0.00 0.00 3.61
1971 2000 8.861086 CATATGTACTAGTGGTTACAGGAAGAT 58.139 37.037 5.39 0.00 0.00 2.40
2012 2044 8.417106 AGTACATTGATACTGACATGTAAGGAG 58.583 37.037 14.99 3.92 34.02 3.69
2282 2314 2.290260 TGCTGTTTCCTTCGATGGATGT 60.290 45.455 19.76 0.00 35.83 3.06
2420 2452 2.897326 TGGGAGATTGACGAAGAACTCA 59.103 45.455 0.00 0.00 0.00 3.41
2449 2481 6.459670 TTTTATCTACTGGACATCGTGCTA 57.540 37.500 0.00 0.00 0.00 3.49
2480 2512 4.924305 ATTCTGTTTGTCAAGCATGTGT 57.076 36.364 2.30 0.00 0.00 3.72
2537 2569 3.391296 TCAAGTCCTCACCACTTAGCTTT 59.609 43.478 0.00 0.00 32.61 3.51
2597 2629 2.225467 GCATGGAGGTAATCTTGAGGC 58.775 52.381 0.00 0.00 0.00 4.70
2657 2689 2.496470 CAAAGACCGGCCTACTAGAACT 59.504 50.000 0.00 0.00 0.00 3.01
2774 2806 2.642311 TGAGAGGTCAACATTAAGGGCA 59.358 45.455 0.00 0.00 0.00 5.36
2819 2851 3.696051 TCTGCAAGTAAAGAATCATGCCC 59.304 43.478 0.00 0.00 33.01 5.36
2829 2861 2.975851 CAAAGCGCTTCTGCAAGTAAAG 59.024 45.455 25.24 0.00 39.64 1.85
2831 2863 2.032030 GTCAAAGCGCTTCTGCAAGTAA 60.032 45.455 25.24 4.37 39.64 2.24
2880 2912 2.626840 CTCTTCTGACAAAGCCCTAGC 58.373 52.381 0.00 0.00 40.32 3.42
3120 3152 2.731968 GCACATAACATGGTTTGCTCCG 60.732 50.000 0.60 0.00 30.01 4.63
3242 3274 5.450550 GCCCTTTATGATTCCCTTTCTTTCG 60.451 44.000 0.00 0.00 0.00 3.46
3443 3476 3.244911 ACTTGGAGATTGAATTGGTCGGT 60.245 43.478 0.00 0.00 0.00 4.69
3703 3736 1.632409 AGAAGAATCCCAAGCTGCTCA 59.368 47.619 1.00 0.00 0.00 4.26
3763 3796 4.272489 TGCCAGGATTATTGAGAAGTTGG 58.728 43.478 0.00 0.00 0.00 3.77
3802 3835 2.030007 TGCAGCTTCTTGAATTTTCCCG 60.030 45.455 0.00 0.00 0.00 5.14
3874 3907 2.380084 TCCGTTTCAGGTCAGCATAC 57.620 50.000 0.00 0.00 0.00 2.39
4009 4042 4.406456 TGTTGTAGAGGGAAACATTGCAT 58.594 39.130 0.00 0.00 0.00 3.96
4027 4060 2.992689 TGGCATGGCAGGCTGTTG 60.993 61.111 24.29 12.40 34.73 3.33
4042 4075 7.722728 TCATCTGAAAATATTCTGGGAATCTGG 59.277 37.037 0.00 0.00 36.48 3.86
4045 4078 7.941238 TCCTCATCTGAAAATATTCTGGGAATC 59.059 37.037 0.00 0.00 36.48 2.52
4051 4084 6.060136 TGGCTCCTCATCTGAAAATATTCTG 58.940 40.000 0.00 0.00 36.48 3.02
4204 4237 3.543460 CGATTATTTCTTTCCGGTGCGTC 60.543 47.826 0.00 0.00 0.00 5.19
4261 4294 2.554462 GCCAACTTCTTTCAGGAACTCC 59.446 50.000 0.00 0.00 34.60 3.85
4291 4324 5.152193 TCCCGGAAGAATATGATTCTACCA 58.848 41.667 0.73 0.00 0.00 3.25
4588 4621 1.349688 TGGTAATGAGTTGGACGGCTT 59.650 47.619 0.00 0.00 0.00 4.35
4841 4874 2.032178 GCCTTTTCACACTGTCACTGAC 59.968 50.000 1.86 1.86 0.00 3.51
4897 4937 9.768662 AGAAGAAGAAAATGTGCAAAATACATT 57.231 25.926 0.00 0.00 32.66 2.71
4910 4951 7.749570 CAGAATACACTGCAGAAGAAGAAAATG 59.250 37.037 23.35 6.39 0.00 2.32
5064 5109 1.471684 CTCCAGGAATGCAAGCAGTTC 59.528 52.381 0.00 0.00 0.00 3.01
5124 5169 2.787473 TTTCACCATCCAGGCTGTAG 57.213 50.000 14.43 2.42 43.14 2.74
5158 5203 8.829373 ATGAATAAAGAAGGGATTTTAGTGCT 57.171 30.769 0.00 0.00 0.00 4.40
5159 5204 9.521503 GAATGAATAAAGAAGGGATTTTAGTGC 57.478 33.333 0.00 0.00 0.00 4.40
5188 5233 1.127343 GAGATGCCCTAACTCTGCCT 58.873 55.000 0.00 0.00 0.00 4.75
5221 5266 6.153756 GCGTACAAATAAGGTGTCCAATTTT 58.846 36.000 0.00 0.00 0.00 1.82
5226 5271 2.288948 ACGCGTACAAATAAGGTGTCCA 60.289 45.455 11.67 0.00 0.00 4.02
5238 5283 2.478514 TCGTGAACTAGTACGCGTACAA 59.521 45.455 41.10 21.50 39.94 2.41
5242 5287 1.532868 ACTTCGTGAACTAGTACGCGT 59.467 47.619 19.17 19.17 39.94 6.01
5247 5301 3.436704 CCGTACCACTTCGTGAACTAGTA 59.563 47.826 0.00 0.00 35.23 1.82
5259 5313 2.955881 GCCAGCTCCCGTACCACTT 61.956 63.158 0.00 0.00 0.00 3.16
5264 5320 1.523938 GAATGGCCAGCTCCCGTAC 60.524 63.158 13.05 0.00 0.00 3.67
5274 5330 3.710926 GGCATGGTTGAATGGCCA 58.289 55.556 8.56 8.56 44.98 5.36
5281 5337 0.106769 ATGTATGCGGGCATGGTTGA 60.107 50.000 16.03 0.00 37.82 3.18
5291 5347 1.334869 GCTCCCTTGAAATGTATGCGG 59.665 52.381 0.00 0.00 0.00 5.69
5293 5349 2.620585 GGAGCTCCCTTGAAATGTATGC 59.379 50.000 23.19 0.00 0.00 3.14
5294 5350 2.874701 CGGAGCTCCCTTGAAATGTATG 59.125 50.000 27.20 4.07 0.00 2.39
5295 5351 3.199880 CGGAGCTCCCTTGAAATGTAT 57.800 47.619 27.20 0.00 0.00 2.29
5296 5352 2.691409 CGGAGCTCCCTTGAAATGTA 57.309 50.000 27.20 0.00 0.00 2.29
5297 5353 3.558674 CGGAGCTCCCTTGAAATGT 57.441 52.632 27.20 0.00 0.00 2.71
5311 5367 3.242870 GCTTCCTTGAAATGTATGCGGAG 60.243 47.826 0.00 0.00 0.00 4.63
5312 5368 2.682856 GCTTCCTTGAAATGTATGCGGA 59.317 45.455 0.00 0.00 0.00 5.54
5313 5369 2.223572 GGCTTCCTTGAAATGTATGCGG 60.224 50.000 0.00 0.00 0.00 5.69
5314 5370 2.539547 CGGCTTCCTTGAAATGTATGCG 60.540 50.000 0.00 0.00 0.00 4.73
5315 5371 2.223572 CCGGCTTCCTTGAAATGTATGC 60.224 50.000 0.00 0.00 0.00 3.14
5316 5372 2.223572 GCCGGCTTCCTTGAAATGTATG 60.224 50.000 22.15 0.00 0.00 2.39
5317 5373 2.024414 GCCGGCTTCCTTGAAATGTAT 58.976 47.619 22.15 0.00 0.00 2.29
5318 5374 1.459450 GCCGGCTTCCTTGAAATGTA 58.541 50.000 22.15 0.00 0.00 2.29
5319 5375 1.250840 GGCCGGCTTCCTTGAAATGT 61.251 55.000 28.56 0.00 0.00 2.71
5320 5376 1.250154 TGGCCGGCTTCCTTGAAATG 61.250 55.000 28.56 0.00 0.00 2.32
5321 5377 0.324645 ATGGCCGGCTTCCTTGAAAT 60.325 50.000 28.56 3.53 0.00 2.17
5322 5378 0.541764 AATGGCCGGCTTCCTTGAAA 60.542 50.000 28.56 1.10 0.00 2.69
5323 5379 0.965363 GAATGGCCGGCTTCCTTGAA 60.965 55.000 28.56 2.22 0.00 2.69
5324 5380 1.378514 GAATGGCCGGCTTCCTTGA 60.379 57.895 28.56 1.83 0.00 3.02
5325 5381 1.250154 TTGAATGGCCGGCTTCCTTG 61.250 55.000 28.56 0.00 0.00 3.61
5326 5382 1.076549 TTGAATGGCCGGCTTCCTT 59.923 52.632 28.56 14.38 0.00 3.36
5327 5383 1.678970 GTTGAATGGCCGGCTTCCT 60.679 57.895 28.56 8.61 0.00 3.36
5328 5384 2.710902 GGTTGAATGGCCGGCTTCC 61.711 63.158 28.56 10.74 0.00 3.46
5329 5385 1.322538 ATGGTTGAATGGCCGGCTTC 61.323 55.000 28.56 23.00 0.00 3.86
5330 5386 1.305213 ATGGTTGAATGGCCGGCTT 60.305 52.632 28.56 14.46 0.00 4.35
5331 5387 2.053865 CATGGTTGAATGGCCGGCT 61.054 57.895 28.56 6.33 0.00 5.52
5332 5388 2.495866 CATGGTTGAATGGCCGGC 59.504 61.111 21.18 21.18 0.00 6.13
5333 5389 2.495866 GCATGGTTGAATGGCCGG 59.504 61.111 0.00 0.00 0.00 6.13
5334 5390 2.495866 GGCATGGTTGAATGGCCG 59.504 61.111 0.00 0.00 44.98 6.13
5337 5393 1.678598 ATGCGGGCATGGTTGAATGG 61.679 55.000 5.17 0.00 35.03 3.16
5338 5394 1.031235 TATGCGGGCATGGTTGAATG 58.969 50.000 16.03 0.00 37.82 2.67
5339 5395 1.032014 GTATGCGGGCATGGTTGAAT 58.968 50.000 16.03 0.00 37.82 2.57
5340 5396 0.322906 TGTATGCGGGCATGGTTGAA 60.323 50.000 16.03 0.00 37.82 2.69
5341 5397 0.106769 ATGTATGCGGGCATGGTTGA 60.107 50.000 16.03 0.00 37.82 3.18
5342 5398 0.746063 AATGTATGCGGGCATGGTTG 59.254 50.000 16.03 0.00 37.82 3.77
5343 5399 1.408702 GAAATGTATGCGGGCATGGTT 59.591 47.619 16.03 5.49 37.82 3.67
5344 5400 1.032014 GAAATGTATGCGGGCATGGT 58.968 50.000 16.03 0.00 37.82 3.55
5345 5401 1.031235 TGAAATGTATGCGGGCATGG 58.969 50.000 16.03 0.00 37.82 3.66
5346 5402 2.544277 CCTTGAAATGTATGCGGGCATG 60.544 50.000 16.03 0.00 37.82 4.06
5347 5403 1.682854 CCTTGAAATGTATGCGGGCAT 59.317 47.619 11.34 11.34 40.19 4.40
5348 5404 1.102154 CCTTGAAATGTATGCGGGCA 58.898 50.000 0.00 0.00 0.00 5.36
5349 5405 0.385390 CCCTTGAAATGTATGCGGGC 59.615 55.000 0.00 0.00 0.00 6.13
5350 5406 1.949525 CTCCCTTGAAATGTATGCGGG 59.050 52.381 0.00 0.00 0.00 6.13
5351 5407 1.334869 GCTCCCTTGAAATGTATGCGG 59.665 52.381 0.00 0.00 0.00 5.69
5352 5408 2.289002 GAGCTCCCTTGAAATGTATGCG 59.711 50.000 0.87 0.00 0.00 4.73
5353 5409 2.620585 GGAGCTCCCTTGAAATGTATGC 59.379 50.000 23.19 0.00 0.00 3.14
5354 5410 2.874701 CGGAGCTCCCTTGAAATGTATG 59.125 50.000 27.20 4.07 0.00 2.39
5355 5411 3.199880 CGGAGCTCCCTTGAAATGTAT 57.800 47.619 27.20 0.00 0.00 2.29
5356 5412 2.691409 CGGAGCTCCCTTGAAATGTA 57.309 50.000 27.20 0.00 0.00 2.29
5357 5413 3.558674 CGGAGCTCCCTTGAAATGT 57.441 52.632 27.20 0.00 0.00 2.71
5371 5427 3.242870 GCTTCCTTGAAATGTATGCGGAG 60.243 47.826 0.00 0.00 0.00 4.63
5372 5428 2.682856 GCTTCCTTGAAATGTATGCGGA 59.317 45.455 0.00 0.00 0.00 5.54
5373 5429 2.223572 GGCTTCCTTGAAATGTATGCGG 60.224 50.000 0.00 0.00 0.00 5.69
5374 5430 2.539547 CGGCTTCCTTGAAATGTATGCG 60.540 50.000 0.00 0.00 0.00 4.73
5375 5431 2.223572 CCGGCTTCCTTGAAATGTATGC 60.224 50.000 0.00 0.00 0.00 3.14
5376 5432 2.223572 GCCGGCTTCCTTGAAATGTATG 60.224 50.000 22.15 0.00 0.00 2.39
5377 5433 2.024414 GCCGGCTTCCTTGAAATGTAT 58.976 47.619 22.15 0.00 0.00 2.29
5378 5434 1.459450 GCCGGCTTCCTTGAAATGTA 58.541 50.000 22.15 0.00 0.00 2.29
5379 5435 1.250840 GGCCGGCTTCCTTGAAATGT 61.251 55.000 28.56 0.00 0.00 2.71
5380 5436 1.250154 TGGCCGGCTTCCTTGAAATG 61.250 55.000 28.56 0.00 0.00 2.32
5381 5437 0.324645 ATGGCCGGCTTCCTTGAAAT 60.325 50.000 28.56 3.53 0.00 2.17
5382 5438 0.541764 AATGGCCGGCTTCCTTGAAA 60.542 50.000 28.56 1.10 0.00 2.69
5383 5439 0.965363 GAATGGCCGGCTTCCTTGAA 60.965 55.000 28.56 2.22 0.00 2.69
5384 5440 1.378514 GAATGGCCGGCTTCCTTGA 60.379 57.895 28.56 1.83 0.00 3.02
5385 5441 1.250154 TTGAATGGCCGGCTTCCTTG 61.250 55.000 28.56 0.00 0.00 3.61
5386 5442 1.076549 TTGAATGGCCGGCTTCCTT 59.923 52.632 28.56 14.38 0.00 3.36
5387 5443 1.678970 GTTGAATGGCCGGCTTCCT 60.679 57.895 28.56 8.61 0.00 3.36
5388 5444 2.710902 GGTTGAATGGCCGGCTTCC 61.711 63.158 28.56 10.74 0.00 3.46
5389 5445 1.322538 ATGGTTGAATGGCCGGCTTC 61.323 55.000 28.56 23.00 0.00 3.86
5390 5446 1.305213 ATGGTTGAATGGCCGGCTT 60.305 52.632 28.56 14.46 0.00 4.35
5391 5447 1.754234 GATGGTTGAATGGCCGGCT 60.754 57.895 28.56 6.33 0.00 5.52
5392 5448 2.785425 GGATGGTTGAATGGCCGGC 61.785 63.158 21.18 21.18 0.00 6.13
5393 5449 2.127232 GGGATGGTTGAATGGCCGG 61.127 63.158 0.00 0.00 0.00 6.13
5394 5450 2.127232 GGGGATGGTTGAATGGCCG 61.127 63.158 0.00 0.00 0.00 6.13
5395 5451 2.127232 CGGGGATGGTTGAATGGCC 61.127 63.158 0.00 0.00 0.00 5.36
5396 5452 2.785425 GCGGGGATGGTTGAATGGC 61.785 63.158 0.00 0.00 0.00 4.40
5397 5453 0.756442 ATGCGGGGATGGTTGAATGG 60.756 55.000 0.00 0.00 0.00 3.16
5398 5454 1.608590 GTATGCGGGGATGGTTGAATG 59.391 52.381 0.00 0.00 0.00 2.67
5399 5455 1.214175 TGTATGCGGGGATGGTTGAAT 59.786 47.619 0.00 0.00 0.00 2.57
5400 5456 0.621082 TGTATGCGGGGATGGTTGAA 59.379 50.000 0.00 0.00 0.00 2.69
5401 5457 0.843309 ATGTATGCGGGGATGGTTGA 59.157 50.000 0.00 0.00 0.00 3.18
5402 5458 1.691196 AATGTATGCGGGGATGGTTG 58.309 50.000 0.00 0.00 0.00 3.77
5403 5459 2.306847 GAAATGTATGCGGGGATGGTT 58.693 47.619 0.00 0.00 0.00 3.67
5404 5460 1.214175 TGAAATGTATGCGGGGATGGT 59.786 47.619 0.00 0.00 0.00 3.55
5405 5461 1.979855 TGAAATGTATGCGGGGATGG 58.020 50.000 0.00 0.00 0.00 3.51
5406 5462 3.490761 GGTTTGAAATGTATGCGGGGATG 60.491 47.826 0.00 0.00 0.00 3.51
5407 5463 2.693074 GGTTTGAAATGTATGCGGGGAT 59.307 45.455 0.00 0.00 0.00 3.85
5408 5464 2.096248 GGTTTGAAATGTATGCGGGGA 58.904 47.619 0.00 0.00 0.00 4.81
5409 5465 1.821753 TGGTTTGAAATGTATGCGGGG 59.178 47.619 0.00 0.00 0.00 5.73
5410 5466 2.230025 TGTGGTTTGAAATGTATGCGGG 59.770 45.455 0.00 0.00 0.00 6.13
5411 5467 3.567576 TGTGGTTTGAAATGTATGCGG 57.432 42.857 0.00 0.00 0.00 5.69
5412 5468 4.562394 GGAATGTGGTTTGAAATGTATGCG 59.438 41.667 0.00 0.00 0.00 4.73
5413 5469 5.477510 TGGAATGTGGTTTGAAATGTATGC 58.522 37.500 0.00 0.00 0.00 3.14
5429 5485 2.870175 TCATCCGGTTTGTTGGAATGT 58.130 42.857 0.00 0.00 37.90 2.71
5434 5490 6.393990 TGATAAAATTCATCCGGTTTGTTGG 58.606 36.000 0.00 0.00 0.00 3.77
5455 5511 8.362639 ACTTTGCTAAATTCTGTCATGTTTGAT 58.637 29.630 0.00 0.00 33.56 2.57
5458 5514 8.819974 CAAACTTTGCTAAATTCTGTCATGTTT 58.180 29.630 0.00 0.00 0.00 2.83
5463 5519 6.096141 TGTCCAAACTTTGCTAAATTCTGTCA 59.904 34.615 0.00 0.00 0.00 3.58
5521 5577 5.722021 ATTGTGGGCTTGGTTTAGTAAAG 57.278 39.130 0.00 0.00 0.00 1.85
5657 5714 7.348201 GCTCTAGTATCGTTGAATTTGGAATG 58.652 38.462 0.00 0.00 0.00 2.67
5740 5797 2.562912 CAGGCCATTCACGCACAC 59.437 61.111 5.01 0.00 0.00 3.82
5755 5812 1.028330 TACTACAGGACCGACCGCAG 61.028 60.000 0.00 0.00 44.74 5.18
5758 5815 1.021390 ACGTACTACAGGACCGACCG 61.021 60.000 0.00 0.00 44.74 4.79
5760 5817 0.371645 CGACGTACTACAGGACCGAC 59.628 60.000 0.00 0.00 0.00 4.79
5791 5851 6.582437 TGTTGATGTACATGTTGTATAGCG 57.418 37.500 14.43 0.00 33.88 4.26
5798 5858 6.901265 TCACTCAATGTTGATGTACATGTTG 58.099 36.000 14.43 9.94 38.69 3.33
5800 5860 7.391275 TCATTCACTCAATGTTGATGTACATGT 59.609 33.333 14.43 2.69 42.47 3.21
5802 5862 7.926674 TCATTCACTCAATGTTGATGTACAT 57.073 32.000 8.43 8.43 42.47 2.29
5848 5908 1.470098 AGATCGGTTGCTTCATGTTGC 59.530 47.619 0.00 0.00 0.00 4.17
5849 5909 2.743664 TGAGATCGGTTGCTTCATGTTG 59.256 45.455 0.00 0.00 0.00 3.33
5854 5914 2.290260 ACCATTGAGATCGGTTGCTTCA 60.290 45.455 0.00 0.00 0.00 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.