Multiple sequence alignment - TraesCS2A01G413900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G413900 chr2A 100.000 6894 0 0 1 6894 670963492 670956599 0.000000e+00 12731.0
1 TraesCS2A01G413900 chr2A 98.042 817 15 1 2284 3100 671038531 671039346 0.000000e+00 1419.0
2 TraesCS2A01G413900 chr2A 87.778 90 6 3 3012 3101 176657632 176657716 4.400000e-17 100.0
3 TraesCS2A01G413900 chr2A 94.118 51 2 1 3832 3881 66799997 66799947 7.410000e-10 76.8
4 TraesCS2A01G413900 chr2D 91.803 2318 96 29 1 2279 525511682 525513944 0.000000e+00 3142.0
5 TraesCS2A01G413900 chr2D 91.072 1781 106 31 3948 5716 525515454 525517193 0.000000e+00 2359.0
6 TraesCS2A01G413900 chr2D 94.661 768 31 3 5747 6513 525517245 525518003 0.000000e+00 1182.0
7 TraesCS2A01G413900 chr2D 91.864 676 36 9 3101 3767 525513942 525514607 0.000000e+00 926.0
8 TraesCS2A01G413900 chr2D 84.034 119 18 1 3764 3881 525514646 525514764 5.650000e-21 113.0
9 TraesCS2A01G413900 chr2D 80.909 110 17 4 1348 1455 206632560 206632667 4.430000e-12 84.2
10 TraesCS2A01G413900 chr2D 92.593 54 3 1 3829 3881 67561132 67561185 7.410000e-10 76.8
11 TraesCS2A01G413900 chr2D 94.000 50 3 0 3879 3928 73856845 73856796 7.410000e-10 76.8
12 TraesCS2A01G413900 chr2D 82.222 90 12 4 4024 4111 532158345 532158432 2.670000e-09 75.0
13 TraesCS2A01G413900 chr2D 79.091 110 18 2 2872 2979 41164174 41164280 3.450000e-08 71.3
14 TraesCS2A01G413900 chr2D 93.478 46 3 0 2871 2916 549875161 549875116 1.240000e-07 69.4
15 TraesCS2A01G413900 chr2B 88.941 1908 85 43 1 1885 621969473 621967669 0.000000e+00 2239.0
16 TraesCS2A01G413900 chr2B 89.820 776 44 13 4961 5716 621961622 621960862 0.000000e+00 963.0
17 TraesCS2A01G413900 chr2B 92.776 526 23 6 5745 6268 621960812 621960300 0.000000e+00 747.0
18 TraesCS2A01G413900 chr2B 89.397 481 45 6 3891 4368 621964257 621963780 9.890000e-168 601.0
19 TraesCS2A01G413900 chr2B 91.709 398 23 4 1889 2282 621967366 621966975 1.690000e-150 544.0
20 TraesCS2A01G413900 chr2B 86.744 347 23 14 3427 3767 621964933 621964604 1.410000e-96 364.0
21 TraesCS2A01G413900 chr2B 87.458 295 15 4 6265 6549 621958460 621958178 3.100000e-83 320.0
22 TraesCS2A01G413900 chr2B 83.140 344 53 5 6553 6893 659063849 659063508 6.720000e-80 309.0
23 TraesCS2A01G413900 chr2B 90.455 220 12 3 3101 3320 621966980 621966770 1.460000e-71 281.0
24 TraesCS2A01G413900 chr2B 94.488 127 6 1 4346 4472 621963767 621963642 1.960000e-45 195.0
25 TraesCS2A01G413900 chr2B 89.172 157 13 4 2288 2442 214277144 214277298 7.060000e-45 193.0
26 TraesCS2A01G413900 chr2B 87.578 161 15 4 2287 2446 47864545 47864389 1.530000e-41 182.0
27 TraesCS2A01G413900 chr2B 84.466 103 8 6 1357 1455 260767723 260767625 2.050000e-15 95.3
28 TraesCS2A01G413900 chr1B 98.160 815 14 1 2287 3101 145218566 145219379 0.000000e+00 1421.0
29 TraesCS2A01G413900 chr5A 93.932 857 7 5 2288 3100 355853408 355852553 0.000000e+00 1253.0
30 TraesCS2A01G413900 chr5A 85.294 102 13 2 1355 1455 494570538 494570638 3.400000e-18 104.0
31 TraesCS2A01G413900 chr5A 94.118 51 2 1 3832 3881 567954553 567954603 7.410000e-10 76.8
32 TraesCS2A01G413900 chr1A 98.351 485 7 1 2616 3100 37618108 37617625 0.000000e+00 850.0
33 TraesCS2A01G413900 chr1A 97.959 294 5 1 2288 2581 37618698 37618406 6.170000e-140 508.0
34 TraesCS2A01G413900 chr1A 92.593 54 3 1 3829 3881 63327721 63327668 7.410000e-10 76.8
35 TraesCS2A01G413900 chr1A 90.164 61 3 2 3834 3892 545635063 545635004 7.410000e-10 76.8
36 TraesCS2A01G413900 chr7D 81.098 656 60 40 2286 2892 579745427 579746067 3.770000e-127 466.0
37 TraesCS2A01G413900 chr7D 76.602 718 105 47 2287 2979 228983722 228983043 3.080000e-88 337.0
38 TraesCS2A01G413900 chr7D 81.373 102 17 2 1355 1455 237411066 237411166 1.590000e-11 82.4
39 TraesCS2A01G413900 chr4D 81.474 502 55 29 2288 2770 234843228 234842746 1.820000e-100 377.0
40 TraesCS2A01G413900 chr6D 86.494 348 38 6 6549 6893 456740050 456739709 2.350000e-99 374.0
41 TraesCS2A01G413900 chr6D 94.118 51 2 1 3832 3881 27511167 27511217 7.410000e-10 76.8
42 TraesCS2A01G413900 chr5D 82.386 352 53 7 6549 6893 339666712 339667061 1.450000e-76 298.0
43 TraesCS2A01G413900 chr5D 86.275 102 12 2 1355 1455 391373660 391373760 7.310000e-20 110.0
44 TraesCS2A01G413900 chr5D 92.857 56 3 1 3827 3881 285256869 285256814 5.730000e-11 80.5
45 TraesCS2A01G413900 chr1D 82.029 345 54 8 6553 6893 295181539 295181199 3.150000e-73 287.0
46 TraesCS2A01G413900 chr5B 81.132 318 56 4 6567 6882 580751774 580751459 1.150000e-62 252.0
47 TraesCS2A01G413900 chr5B 91.860 86 3 2 3012 3097 412264032 412264113 4.370000e-22 117.0
48 TraesCS2A01G413900 chr5B 86.275 102 12 2 1355 1455 471402096 471402196 7.310000e-20 110.0
49 TraesCS2A01G413900 chr5B 89.888 89 4 3 3012 3100 689862298 689862381 7.310000e-20 110.0
50 TraesCS2A01G413900 chr3A 81.150 313 49 8 6549 6855 55218228 55218536 6.910000e-60 243.0
51 TraesCS2A01G413900 chr3A 90.000 90 4 3 3012 3101 99252136 99252220 2.030000e-20 111.0
52 TraesCS2A01G413900 chr3A 89.888 89 5 3 3012 3100 692490980 692491064 2.030000e-20 111.0
53 TraesCS2A01G413900 chr7A 85.153 229 30 4 6543 6769 608424903 608425129 1.500000e-56 231.0
54 TraesCS2A01G413900 chr7A 76.923 234 34 11 2686 2900 711782838 711782606 1.570000e-21 115.0
55 TraesCS2A01G413900 chr7A 82.353 102 16 2 1355 1455 252716002 252716102 3.430000e-13 87.9
56 TraesCS2A01G413900 chr3D 73.699 730 100 59 2288 2979 342807540 342806865 4.220000e-47 200.0
57 TraesCS2A01G413900 chr3D 100.000 35 0 0 3894 3928 29808040 29808006 1.600000e-06 65.8
58 TraesCS2A01G413900 chr4A 88.679 159 14 4 2287 2442 660219956 660220113 2.540000e-44 191.0
59 TraesCS2A01G413900 chr7B 76.230 244 54 4 6573 6813 647071540 647071782 7.260000e-25 126.0
60 TraesCS2A01G413900 chr7B 82.353 102 16 2 1355 1455 214071244 214071344 3.430000e-13 87.9
61 TraesCS2A01G413900 chr6A 91.228 57 4 1 3832 3887 117403518 117403462 7.410000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G413900 chr2A 670956599 670963492 6893 True 12731.000000 12731 100.000000 1 6894 1 chr2A.!!$R2 6893
1 TraesCS2A01G413900 chr2A 671038531 671039346 815 False 1419.000000 1419 98.042000 2284 3100 1 chr2A.!!$F2 816
2 TraesCS2A01G413900 chr2D 525511682 525518003 6321 False 1544.400000 3142 90.686800 1 6513 5 chr2D.!!$F5 6512
3 TraesCS2A01G413900 chr2B 621958178 621969473 11295 True 694.888889 2239 90.198667 1 6549 9 chr2B.!!$R4 6548
4 TraesCS2A01G413900 chr1B 145218566 145219379 813 False 1421.000000 1421 98.160000 2287 3101 1 chr1B.!!$F1 814
5 TraesCS2A01G413900 chr5A 355852553 355853408 855 True 1253.000000 1253 93.932000 2288 3100 1 chr5A.!!$R1 812
6 TraesCS2A01G413900 chr1A 37617625 37618698 1073 True 679.000000 850 98.155000 2288 3100 2 chr1A.!!$R3 812
7 TraesCS2A01G413900 chr7D 579745427 579746067 640 False 466.000000 466 81.098000 2286 2892 1 chr7D.!!$F2 606
8 TraesCS2A01G413900 chr7D 228983043 228983722 679 True 337.000000 337 76.602000 2287 2979 1 chr7D.!!$R1 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
822 860 0.110192 GCTTTTATATCGGCGCCAGC 60.110 55.000 28.98 20.92 44.18 4.85 F
823 861 0.163788 CTTTTATATCGGCGCCAGCG 59.836 55.000 28.98 13.22 46.35 5.18 F
1806 1860 0.179187 CTCAGCGTGACAGAGTACGG 60.179 60.000 0.00 0.00 40.43 4.02 F
1957 2313 1.004745 GGAAACAAGGGGAGATCTGCA 59.995 52.381 16.72 0.00 0.00 4.41 F
3284 4005 2.275318 AGTAGCGGTCGTACTACTGTC 58.725 52.381 8.06 1.49 45.65 3.51 F
4064 7360 0.036164 TTGTGTGTCTGATTCGGGGG 59.964 55.000 0.00 0.00 0.00 5.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2281 2640 0.035881 CAGATCCGCCCATGCATAGT 59.964 55.000 0.00 0.00 37.32 2.12 R
2282 2641 0.675837 CCAGATCCGCCCATGCATAG 60.676 60.000 0.00 0.00 37.32 2.23 R
3284 4005 0.454957 CGTGGCGCATTTTCCTCTTG 60.455 55.000 10.83 0.00 0.00 3.02 R
3443 5928 1.130561 GCACCAGTTAACTGATTCGCC 59.869 52.381 32.50 13.11 46.59 5.54 R
4830 9800 0.031994 GCAGCTTCCCGCAAGAAAAA 59.968 50.000 0.00 0.00 42.61 1.94 R
6058 11135 0.246360 ATTTACTTGGGGCGCTTTGC 59.754 50.000 7.64 0.00 45.38 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.955660 CGCTATTATTTCCCCCAAAGCA 59.044 45.455 0.00 0.00 0.00 3.91
184 194 1.977009 CTTTTTCCCCCTCACCGCC 60.977 63.158 0.00 0.00 0.00 6.13
203 213 3.342627 CGTCACGGCGGCTTTCAA 61.343 61.111 13.24 0.00 0.00 2.69
205 215 2.110213 TCACGGCGGCTTTCAACT 59.890 55.556 13.24 0.00 0.00 3.16
219 229 3.490439 TTCAACTTGCTCTCCATGACA 57.510 42.857 0.00 0.00 0.00 3.58
229 239 4.447342 CCATGACAGGTGGGGCCC 62.447 72.222 18.17 18.17 38.26 5.80
238 248 4.815108 GTGGGGCCCGATTCACCC 62.815 72.222 19.83 0.00 43.44 4.61
421 442 4.948257 GGATAACGTGGTCCCACC 57.052 61.111 10.77 0.00 43.49 4.61
422 443 1.222661 GGATAACGTGGTCCCACCC 59.777 63.158 10.77 2.26 43.49 4.61
465 486 2.206900 TGGTGAGGCCAGGAAGGA 59.793 61.111 5.01 0.00 43.61 3.36
474 495 1.846712 GCCAGGAAGGAGGAGCAGTT 61.847 60.000 0.00 0.00 41.22 3.16
648 682 2.816958 CAGCAGGCTACAGTGGCG 60.817 66.667 2.36 0.00 37.59 5.69
649 683 3.314331 AGCAGGCTACAGTGGCGT 61.314 61.111 2.36 0.00 37.59 5.68
650 684 1.982395 AGCAGGCTACAGTGGCGTA 60.982 57.895 3.54 0.00 37.59 4.42
673 707 3.247648 AGCACACTCCTGCTGCCT 61.248 61.111 0.00 0.00 46.10 4.75
674 708 3.054503 GCACACTCCTGCTGCCTG 61.055 66.667 0.00 0.00 34.06 4.85
675 709 3.054503 CACACTCCTGCTGCCTGC 61.055 66.667 0.00 0.00 43.25 4.85
676 710 4.341783 ACACTCCTGCTGCCTGCC 62.342 66.667 0.00 0.00 42.00 4.85
816 854 4.154375 GCCTTTCCTAGCTTTTATATCGGC 59.846 45.833 0.00 0.00 0.00 5.54
817 855 4.389077 CCTTTCCTAGCTTTTATATCGGCG 59.611 45.833 0.00 0.00 0.00 6.46
818 856 2.955614 TCCTAGCTTTTATATCGGCGC 58.044 47.619 0.00 0.00 0.00 6.53
819 857 2.000447 CCTAGCTTTTATATCGGCGCC 59.000 52.381 19.07 19.07 0.00 6.53
820 858 2.611971 CCTAGCTTTTATATCGGCGCCA 60.612 50.000 28.98 14.46 0.00 5.69
821 859 1.512926 AGCTTTTATATCGGCGCCAG 58.487 50.000 28.98 19.33 0.00 4.85
822 860 0.110192 GCTTTTATATCGGCGCCAGC 60.110 55.000 28.98 20.92 44.18 4.85
823 861 0.163788 CTTTTATATCGGCGCCAGCG 59.836 55.000 28.98 13.22 46.35 5.18
864 902 3.011482 ACCTACCTCTGCCTGTACTTACT 59.989 47.826 0.00 0.00 0.00 2.24
865 903 4.024670 CCTACCTCTGCCTGTACTTACTT 58.975 47.826 0.00 0.00 0.00 2.24
866 904 5.198965 CCTACCTCTGCCTGTACTTACTTA 58.801 45.833 0.00 0.00 0.00 2.24
867 905 5.067544 CCTACCTCTGCCTGTACTTACTTAC 59.932 48.000 0.00 0.00 0.00 2.34
946 984 2.046314 TTTCAGCCTAGCCACCGC 60.046 61.111 0.00 0.00 0.00 5.68
1482 1523 0.322187 CTTTCTTACCCACACCCCCG 60.322 60.000 0.00 0.00 0.00 5.73
1496 1537 2.509336 CCCGACTTGTGCTAGCCG 60.509 66.667 13.29 7.06 0.00 5.52
1521 1562 3.128938 GCTAGATCCACACTTCACGTACT 59.871 47.826 0.00 0.00 0.00 2.73
1552 1593 1.999071 GCGTGCGGAGTCTCTCTCAT 61.999 60.000 0.00 0.00 44.40 2.90
1573 1614 1.136872 CGCTAGCGTTGACTCTCTGC 61.137 60.000 28.66 0.00 34.35 4.26
1784 1830 2.710760 CTGTTCTAGACTTCTAGCGCG 58.289 52.381 0.00 0.00 44.24 6.86
1806 1860 0.179187 CTCAGCGTGACAGAGTACGG 60.179 60.000 0.00 0.00 40.43 4.02
1848 1902 2.937149 GAGAAGAACCATCGTTAAGGCC 59.063 50.000 0.00 0.00 30.30 5.19
1915 2271 1.345715 AACCGGCAGGGGATAAGAGG 61.346 60.000 8.08 0.00 43.47 3.69
1957 2313 1.004745 GGAAACAAGGGGAGATCTGCA 59.995 52.381 16.72 0.00 0.00 4.41
1977 2333 3.760035 AGGTGCGCGTAGGGACAG 61.760 66.667 8.43 0.00 46.37 3.51
2010 2366 3.188786 GATGCGTGAGACGGGTGC 61.189 66.667 0.00 0.00 42.82 5.01
2019 2375 3.286751 GACGGGTGCAGCAAAGCA 61.287 61.111 19.06 0.00 43.35 3.91
2042 2398 6.250527 GCAAATAAACACTCGCGATTTAATGT 59.749 34.615 10.36 6.77 0.00 2.71
2044 2400 2.806288 ACACTCGCGATTTAATGTGC 57.194 45.000 19.91 0.00 0.00 4.57
2086 2442 4.388499 CGCTTGGGTAGGCCGTGT 62.388 66.667 0.00 0.00 34.97 4.49
2088 2444 2.332654 GCTTGGGTAGGCCGTGTTG 61.333 63.158 0.00 0.00 34.97 3.33
2147 2503 4.814294 CCACGTACAGGAGCGCCC 62.814 72.222 2.29 5.07 33.31 6.13
2241 2600 4.201910 GCGCTAGTTATTGAAGAAATGGCA 60.202 41.667 8.84 0.00 0.00 4.92
2256 2615 5.867716 AGAAATGGCATCGATATACGGTTAC 59.132 40.000 0.00 0.00 42.82 2.50
2269 2628 8.277018 CGATATACGGTTACTGATAGATGCTAG 58.723 40.741 0.00 0.00 38.46 3.42
2279 2638 7.737972 ACTGATAGATGCTAGTACAGTGTAG 57.262 40.000 2.39 0.00 36.11 2.74
2280 2639 7.284074 ACTGATAGATGCTAGTACAGTGTAGT 58.716 38.462 14.89 14.89 36.11 2.73
2281 2640 8.430431 ACTGATAGATGCTAGTACAGTGTAGTA 58.570 37.037 15.50 15.50 36.11 1.82
2282 2641 8.604640 TGATAGATGCTAGTACAGTGTAGTAC 57.395 38.462 12.90 10.72 43.61 2.73
2818 3504 6.157211 AGGTATCGTAGCTTATCCAATTTCG 58.843 40.000 0.00 0.00 31.36 3.46
2831 3517 4.636249 TCCAATTTCGAAACCCCAATTTG 58.364 39.130 13.81 11.43 0.00 2.32
3134 3855 6.929896 CACCATTTGTGCGTTATACTACTAC 58.070 40.000 0.00 0.00 38.34 2.73
3157 3878 5.757850 CAGAATGGTGACTTATTAAGGGC 57.242 43.478 8.26 0.91 0.00 5.19
3176 3897 3.620929 GCACTGTGCATTGGAGATATG 57.379 47.619 26.70 0.00 44.26 1.78
3201 3922 2.767505 AGAGGCAGTACAAAAAGACCG 58.232 47.619 0.00 0.00 0.00 4.79
3210 3931 2.863809 ACAAAAAGACCGCCAGATTCT 58.136 42.857 0.00 0.00 0.00 2.40
3246 3967 7.384115 CGGTCAAACCCATACAGTTACATATAG 59.616 40.741 0.00 0.00 33.75 1.31
3247 3968 7.660208 GGTCAAACCCATACAGTTACATATAGG 59.340 40.741 0.00 0.00 30.04 2.57
3248 3969 8.426489 GTCAAACCCATACAGTTACATATAGGA 58.574 37.037 0.00 0.00 0.00 2.94
3249 3970 8.994500 TCAAACCCATACAGTTACATATAGGAA 58.006 33.333 0.00 0.00 0.00 3.36
3250 3971 9.793259 CAAACCCATACAGTTACATATAGGAAT 57.207 33.333 0.00 0.00 0.00 3.01
3284 4005 2.275318 AGTAGCGGTCGTACTACTGTC 58.725 52.381 8.06 1.49 45.65 3.51
3305 4026 3.683587 GAGGAAAATGCGCCACGGC 62.684 63.158 4.18 0.00 37.85 5.68
3393 4115 8.715842 AGGAGATCTTTTTAGGGTTTAGTATCC 58.284 37.037 0.00 0.00 0.00 2.59
3476 5961 3.281727 ACTGGTGCCGATCAAATATGT 57.718 42.857 0.00 0.00 0.00 2.29
3482 5967 3.057019 TGCCGATCAAATATGTAGTCGC 58.943 45.455 0.00 0.00 0.00 5.19
3483 5968 2.090658 GCCGATCAAATATGTAGTCGCG 59.909 50.000 0.00 0.00 0.00 5.87
3484 5969 2.090658 CCGATCAAATATGTAGTCGCGC 59.909 50.000 0.00 0.00 0.00 6.86
3486 5971 3.425525 CGATCAAATATGTAGTCGCGCTT 59.574 43.478 5.56 0.00 0.00 4.68
3487 5972 4.615541 CGATCAAATATGTAGTCGCGCTTA 59.384 41.667 5.56 0.00 0.00 3.09
3488 5973 5.441614 CGATCAAATATGTAGTCGCGCTTAC 60.442 44.000 5.56 7.08 0.00 2.34
3489 5974 4.928601 TCAAATATGTAGTCGCGCTTACT 58.071 39.130 15.38 15.38 0.00 2.24
3513 6002 4.785511 AGTTAGCCTGGCGTATAGTATG 57.214 45.455 13.96 0.00 0.00 2.39
3679 6172 2.210116 TGTGGACTTCGAAGTTGCTTC 58.790 47.619 30.22 17.34 39.88 3.86
3693 6186 4.813027 AGTTGCTTCGAAGTAAATACCGA 58.187 39.130 26.94 6.42 32.46 4.69
3702 6195 9.090692 CTTCGAAGTAAATACCGATTTTCCTTA 57.909 33.333 17.24 0.00 36.62 2.69
3816 6359 8.814931 TGGATAAACAAATGATTCAAGTCCAAT 58.185 29.630 0.00 0.00 0.00 3.16
3992 7287 3.084278 CACGTCATCGATTTCTTTTCGC 58.916 45.455 0.00 0.00 40.62 4.70
3998 7293 0.247695 CGATTTCTTTTCGCGCCTCC 60.248 55.000 0.00 0.00 0.00 4.30
4041 7336 9.347934 TGAACAACAAAACACTATAACTTTGTG 57.652 29.630 0.22 0.00 40.23 3.33
4059 7354 5.437289 TTGTGGATTTGTGTGTCTGATTC 57.563 39.130 0.00 0.00 0.00 2.52
4064 7360 0.036164 TTGTGTGTCTGATTCGGGGG 59.964 55.000 0.00 0.00 0.00 5.40
4066 7362 0.323629 GTGTGTCTGATTCGGGGGAA 59.676 55.000 0.00 0.00 0.00 3.97
4067 7363 1.065418 GTGTGTCTGATTCGGGGGAAT 60.065 52.381 0.00 0.00 0.00 3.01
4068 7364 2.169769 GTGTGTCTGATTCGGGGGAATA 59.830 50.000 0.00 0.00 0.00 1.75
4069 7365 2.434336 TGTGTCTGATTCGGGGGAATAG 59.566 50.000 0.00 0.00 0.00 1.73
4070 7366 2.047061 TGTCTGATTCGGGGGAATAGG 58.953 52.381 0.00 0.00 0.00 2.57
4073 7369 3.135895 GTCTGATTCGGGGGAATAGGAAA 59.864 47.826 0.00 0.00 0.00 3.13
4074 7370 3.980698 TCTGATTCGGGGGAATAGGAAAT 59.019 43.478 0.00 0.00 0.00 2.17
4075 7371 5.012768 GTCTGATTCGGGGGAATAGGAAATA 59.987 44.000 0.00 0.00 0.00 1.40
4076 7372 5.012768 TCTGATTCGGGGGAATAGGAAATAC 59.987 44.000 0.00 0.00 0.00 1.89
4078 7374 4.699925 TTCGGGGGAATAGGAAATACAG 57.300 45.455 0.00 0.00 0.00 2.74
4162 7458 3.914364 GCTATTTCGCCAACACTTTTCTG 59.086 43.478 0.00 0.00 0.00 3.02
4202 7498 5.540400 TGTTCTAAAAAGAGTCCCGAAGA 57.460 39.130 0.00 0.00 0.00 2.87
4238 7534 9.522804 CTAGTAATCATGAGGTTAAGTGAGAAC 57.477 37.037 0.09 0.00 0.00 3.01
4258 7554 4.617253 ACCCCTATTGTTTTTCTTTGCC 57.383 40.909 0.00 0.00 0.00 4.52
4259 7555 4.231273 ACCCCTATTGTTTTTCTTTGCCT 58.769 39.130 0.00 0.00 0.00 4.75
4261 7557 4.485163 CCCTATTGTTTTTCTTTGCCTCG 58.515 43.478 0.00 0.00 0.00 4.63
4265 7561 4.442375 TTGTTTTTCTTTGCCTCGTTCA 57.558 36.364 0.00 0.00 0.00 3.18
4411 7744 3.360956 CTCCCAAAGCAATGGCCGC 62.361 63.158 0.00 0.00 42.56 6.53
4412 7745 3.693471 CCCAAAGCAATGGCCGCA 61.693 61.111 0.00 0.00 42.56 5.69
4457 7791 4.944048 AGCAGGAAACATTGTAAACCAAC 58.056 39.130 0.00 0.00 35.44 3.77
4533 7867 9.683069 CCTATGGTATTATCATTTTGCAGTTTC 57.317 33.333 0.00 0.00 0.00 2.78
4540 7874 8.624701 ATTATCATTTTGCAGTTTCGATTGAG 57.375 30.769 0.00 0.00 0.00 3.02
4616 7950 5.445964 TCTGAAATTACCAAAGGGATAGGC 58.554 41.667 0.00 0.00 38.05 3.93
4630 7964 5.961897 AGGGATAGGCAATTTTGATCTGAT 58.038 37.500 0.00 0.00 0.00 2.90
4647 7981 4.439057 TCTGATTATTACCAACGGCTGAC 58.561 43.478 0.00 0.00 0.00 3.51
4649 7983 3.055021 TGATTATTACCAACGGCTGACCA 60.055 43.478 0.00 0.00 34.57 4.02
4653 7987 2.054232 TACCAACGGCTGACCAAAAA 57.946 45.000 0.00 0.00 34.57 1.94
4654 7988 0.744281 ACCAACGGCTGACCAAAAAG 59.256 50.000 0.00 0.00 34.57 2.27
4655 7989 0.744281 CCAACGGCTGACCAAAAAGT 59.256 50.000 0.00 0.00 34.57 2.66
4656 7990 1.950909 CCAACGGCTGACCAAAAAGTA 59.049 47.619 0.00 0.00 34.57 2.24
4657 7991 2.359531 CCAACGGCTGACCAAAAAGTAA 59.640 45.455 0.00 0.00 34.57 2.24
4664 7998 6.084277 CGGCTGACCAAAAAGTAACTATTTC 58.916 40.000 0.00 0.00 34.57 2.17
4681 8015 1.471119 TTCTAAGTCGACCGAGCCAT 58.529 50.000 13.01 0.00 0.00 4.40
4687 8021 0.669077 GTCGACCGAGCCATAGTCAT 59.331 55.000 3.51 0.00 0.00 3.06
4701 8035 8.396272 AGCCATAGTCATTCCAATTATAACAC 57.604 34.615 0.00 0.00 0.00 3.32
4708 8042 6.601613 GTCATTCCAATTATAACACAGTGGGA 59.398 38.462 0.00 0.00 0.00 4.37
4758 9712 2.161211 TGATCAATGTGCGCGAATCAAA 59.839 40.909 12.10 0.00 0.00 2.69
4759 9713 2.917701 TCAATGTGCGCGAATCAAAT 57.082 40.000 12.10 0.00 0.00 2.32
4760 9714 3.214697 TCAATGTGCGCGAATCAAATT 57.785 38.095 12.10 1.98 0.00 1.82
4762 9716 4.727475 TCAATGTGCGCGAATCAAATTAA 58.273 34.783 12.10 0.00 0.00 1.40
4763 9717 4.792702 TCAATGTGCGCGAATCAAATTAAG 59.207 37.500 12.10 0.00 0.00 1.85
4765 9719 4.614555 TGTGCGCGAATCAAATTAAGAT 57.385 36.364 12.10 0.00 0.00 2.40
4768 9722 4.434588 GTGCGCGAATCAAATTAAGATCAC 59.565 41.667 12.10 0.00 0.00 3.06
4773 9729 5.423717 CGAATCAAATTAAGATCACGGACG 58.576 41.667 0.00 0.00 0.00 4.79
4799 9755 5.290493 TCCTGACAAAACTTCTTCAGCTA 57.710 39.130 0.00 0.00 35.18 3.32
4805 9761 4.035675 ACAAAACTTCTTCAGCTACTGTGC 59.964 41.667 0.00 0.00 32.61 4.57
4811 9781 3.919216 TCTTCAGCTACTGTGCTTCTTC 58.081 45.455 0.00 0.00 41.98 2.87
4812 9782 3.576118 TCTTCAGCTACTGTGCTTCTTCT 59.424 43.478 0.00 0.00 41.98 2.85
4813 9783 4.039730 TCTTCAGCTACTGTGCTTCTTCTT 59.960 41.667 0.00 0.00 41.98 2.52
4814 9784 3.919216 TCAGCTACTGTGCTTCTTCTTC 58.081 45.455 0.00 0.00 41.98 2.87
4815 9785 3.576118 TCAGCTACTGTGCTTCTTCTTCT 59.424 43.478 0.00 0.00 41.98 2.85
4816 9786 4.039730 TCAGCTACTGTGCTTCTTCTTCTT 59.960 41.667 0.00 0.00 41.98 2.52
4817 9787 4.754114 CAGCTACTGTGCTTCTTCTTCTTT 59.246 41.667 0.00 0.00 41.98 2.52
4818 9788 5.238214 CAGCTACTGTGCTTCTTCTTCTTTT 59.762 40.000 0.00 0.00 41.98 2.27
4819 9789 5.825151 AGCTACTGTGCTTCTTCTTCTTTTT 59.175 36.000 0.00 0.00 40.93 1.94
4820 9790 6.017523 AGCTACTGTGCTTCTTCTTCTTTTTC 60.018 38.462 0.00 0.00 40.93 2.29
4821 9791 6.017523 GCTACTGTGCTTCTTCTTCTTTTTCT 60.018 38.462 0.00 0.00 0.00 2.52
4822 9792 6.765915 ACTGTGCTTCTTCTTCTTTTTCTT 57.234 33.333 0.00 0.00 0.00 2.52
4823 9793 6.790282 ACTGTGCTTCTTCTTCTTTTTCTTC 58.210 36.000 0.00 0.00 0.00 2.87
4824 9794 6.601217 ACTGTGCTTCTTCTTCTTTTTCTTCT 59.399 34.615 0.00 0.00 0.00 2.85
4825 9795 7.121907 ACTGTGCTTCTTCTTCTTTTTCTTCTT 59.878 33.333 0.00 0.00 0.00 2.52
4826 9796 7.830739 TGTGCTTCTTCTTCTTTTTCTTCTTT 58.169 30.769 0.00 0.00 0.00 2.52
4827 9797 8.306761 TGTGCTTCTTCTTCTTTTTCTTCTTTT 58.693 29.630 0.00 0.00 0.00 2.27
4828 9798 9.144747 GTGCTTCTTCTTCTTTTTCTTCTTTTT 57.855 29.630 0.00 0.00 0.00 1.94
4944 9966 3.596214 GCTCCTGGTTTTCGACAGATAA 58.404 45.455 2.52 0.00 36.86 1.75
4958 9980 4.341235 CGACAGATAAGGTATCCTGGAACA 59.659 45.833 0.00 0.00 35.79 3.18
5023 10048 3.555956 GGTACATGTGATACGAAGCTTGG 59.444 47.826 9.11 4.94 0.00 3.61
5031 10056 4.508124 GTGATACGAAGCTTGGTAATCCTG 59.492 45.833 22.79 0.00 34.23 3.86
5039 10071 4.860022 AGCTTGGTAATCCTGCAGTTATT 58.140 39.130 13.81 13.95 36.76 1.40
5071 10103 3.906846 ACAAGTCACTGAGGAGGAGAATT 59.093 43.478 0.00 0.00 0.00 2.17
5074 10106 4.941713 AGTCACTGAGGAGGAGAATTACT 58.058 43.478 0.00 0.00 0.00 2.24
5112 10144 5.762045 CGAAACAGTGACCAAATCTTGATT 58.238 37.500 0.00 0.00 0.00 2.57
5135 10167 3.367292 CCCACCTTTACACGTACGTACAT 60.367 47.826 22.34 12.14 0.00 2.29
5136 10168 3.609373 CCACCTTTACACGTACGTACATG 59.391 47.826 22.34 22.00 0.00 3.21
5138 10170 4.321745 CACCTTTACACGTACGTACATGTC 59.678 45.833 28.49 0.11 34.23 3.06
5165 10198 6.183360 TGTTTCACTAGGGTTTTTGTGATGTC 60.183 38.462 0.00 0.00 38.89 3.06
5172 10205 3.243401 GGGTTTTTGTGATGTCTGTGGAC 60.243 47.826 0.00 0.00 42.42 4.02
5201 10234 1.202348 CAGTCATCGTCTACTGGTGCA 59.798 52.381 0.00 0.00 39.55 4.57
5227 10260 1.133853 ACCTGGTAGCCGTCTAGGTAG 60.134 57.143 0.00 0.00 43.24 3.18
5236 10269 1.654317 CGTCTAGGTAGCACTCGAGT 58.346 55.000 13.58 13.58 0.00 4.18
5237 10270 2.008329 CGTCTAGGTAGCACTCGAGTT 58.992 52.381 17.26 4.98 0.00 3.01
5238 10271 3.193263 CGTCTAGGTAGCACTCGAGTTA 58.807 50.000 17.26 3.81 0.00 2.24
5239 10272 3.620374 CGTCTAGGTAGCACTCGAGTTAA 59.380 47.826 17.26 0.71 0.00 2.01
5263 10296 2.094659 AGCGCAAATGACGAGGACG 61.095 57.895 11.47 0.00 45.75 4.79
5320 10353 4.677779 GCAGTTCAAAACACAACTGGACAT 60.678 41.667 12.46 0.00 46.52 3.06
5321 10354 5.036737 CAGTTCAAAACACAACTGGACATC 58.963 41.667 4.23 0.00 43.92 3.06
5322 10355 3.961477 TCAAAACACAACTGGACATCG 57.039 42.857 0.00 0.00 0.00 3.84
5323 10356 3.275143 TCAAAACACAACTGGACATCGT 58.725 40.909 0.00 0.00 0.00 3.73
5324 10357 3.064682 TCAAAACACAACTGGACATCGTG 59.935 43.478 0.00 0.00 0.00 4.35
5325 10358 0.944386 AACACAACTGGACATCGTGC 59.056 50.000 0.00 0.00 0.00 5.34
5326 10359 1.221466 ACACAACTGGACATCGTGCG 61.221 55.000 0.00 0.00 0.00 5.34
5327 10360 1.069090 ACAACTGGACATCGTGCGT 59.931 52.632 0.00 0.00 0.00 5.24
5328 10361 0.944311 ACAACTGGACATCGTGCGTC 60.944 55.000 0.00 0.00 0.00 5.19
5329 10362 0.667487 CAACTGGACATCGTGCGTCT 60.667 55.000 0.00 0.00 33.73 4.18
5373 10421 3.983821 AGGAAGGAGTCTATCTTTCGGT 58.016 45.455 0.00 0.00 43.25 4.69
5374 10422 5.126699 AGGAAGGAGTCTATCTTTCGGTA 57.873 43.478 0.00 0.00 43.25 4.02
5408 10456 5.644644 AGTTTGCATGCAACTAATAAGCTC 58.355 37.500 31.99 11.88 35.46 4.09
5733 10808 0.690411 CATGACCAGGGAGCTCCTCT 60.690 60.000 31.36 22.89 46.12 3.69
5737 10812 2.430610 CCAGGGAGCTCCTCTTCCG 61.431 68.421 31.36 14.46 45.82 4.30
5739 10814 3.855853 GGGAGCTCCTCTTCCGGC 61.856 72.222 31.36 9.17 35.95 6.13
5740 10815 4.214327 GGAGCTCCTCTTCCGGCG 62.214 72.222 26.25 0.00 0.00 6.46
5741 10816 4.214327 GAGCTCCTCTTCCGGCGG 62.214 72.222 22.51 22.51 0.00 6.13
5923 10998 2.565210 TGGTGCAAGTACGTATACCG 57.435 50.000 0.00 0.00 44.03 4.02
5924 10999 1.134753 TGGTGCAAGTACGTATACCGG 59.865 52.381 0.00 0.00 42.24 5.28
5925 11000 1.405105 GGTGCAAGTACGTATACCGGA 59.595 52.381 9.46 0.00 42.24 5.14
5926 11001 2.542411 GGTGCAAGTACGTATACCGGAG 60.542 54.545 9.46 0.00 42.24 4.63
5927 11002 2.098117 GTGCAAGTACGTATACCGGAGT 59.902 50.000 9.46 2.28 42.24 3.85
6047 11123 1.844687 AGCTGCATCCCCTTCTTTTC 58.155 50.000 1.02 0.00 0.00 2.29
6058 11135 1.340114 CCTTCTTTTCTTCTCCCCCGG 60.340 57.143 0.00 0.00 0.00 5.73
6090 11167 4.459337 CCCAAGTAAATTCTGGTCCTGAAC 59.541 45.833 12.96 2.23 0.00 3.18
6095 11172 3.710209 AATTCTGGTCCTGAACTCCAG 57.290 47.619 12.96 4.30 46.94 3.86
6101 11178 0.322008 GTCCTGAACTCCAGCTTGGG 60.322 60.000 2.86 0.00 41.57 4.12
6108 11185 4.079253 TGAACTCCAGCTTGGGTTAATTC 58.921 43.478 2.46 0.00 38.32 2.17
6123 11200 0.250467 AATTCGAGATCATGGGCGGG 60.250 55.000 0.00 0.00 0.00 6.13
6124 11201 2.738213 ATTCGAGATCATGGGCGGGC 62.738 60.000 0.00 0.00 0.00 6.13
6126 11203 4.996434 GAGATCATGGGCGGGCGG 62.996 72.222 0.00 0.00 0.00 6.13
6164 11241 6.128688 GCTGTCATTCTTGTTTCTCTGTAGAC 60.129 42.308 0.00 0.00 0.00 2.59
6165 11242 5.920840 TGTCATTCTTGTTTCTCTGTAGACG 59.079 40.000 0.00 0.00 0.00 4.18
6193 11270 5.291971 GTGAACTGAATGGAAAAGTTGCAT 58.708 37.500 0.00 0.00 44.02 3.96
6326 13246 1.333636 CCACTCGCCATCCTCTCCTT 61.334 60.000 0.00 0.00 0.00 3.36
6334 13254 1.134670 CCATCCTCTCCTTTCGTGACC 60.135 57.143 0.00 0.00 0.00 4.02
6336 13256 1.446272 CCTCTCCTTTCGTGACCGC 60.446 63.158 0.00 0.00 0.00 5.68
6382 13302 2.797156 GACCTCACCGAATCATTCATCG 59.203 50.000 0.00 0.00 38.74 3.84
6431 13360 1.303309 GGCCTATGTGCACTAGCTTG 58.697 55.000 19.41 0.00 42.74 4.01
6505 13434 2.082231 CTGTCAATGTTCAGAGGCAGG 58.918 52.381 3.18 0.00 34.02 4.85
6521 13450 0.607489 CAGGGCTTGTGCTTGCTACT 60.607 55.000 0.00 0.00 39.59 2.57
6540 13469 6.037098 GCTACTTGCTATCCATACCGAATAG 58.963 44.000 0.00 0.00 38.95 1.73
6543 13472 3.786553 TGCTATCCATACCGAATAGGGT 58.213 45.455 0.00 0.00 46.96 4.34
6544 13473 4.938028 TGCTATCCATACCGAATAGGGTA 58.062 43.478 0.00 0.00 46.09 3.69
6545 13474 4.708421 TGCTATCCATACCGAATAGGGTAC 59.292 45.833 0.00 0.00 44.92 3.34
6546 13475 4.954826 GCTATCCATACCGAATAGGGTACT 59.045 45.833 0.00 0.00 44.92 2.73
6547 13476 5.163540 GCTATCCATACCGAATAGGGTACTG 60.164 48.000 0.00 0.00 44.92 2.74
6548 13477 4.458256 TCCATACCGAATAGGGTACTGA 57.542 45.455 0.00 0.00 44.92 3.41
6549 13478 4.404640 TCCATACCGAATAGGGTACTGAG 58.595 47.826 0.00 0.00 44.92 3.35
6550 13479 3.510360 CCATACCGAATAGGGTACTGAGG 59.490 52.174 0.00 0.00 44.92 3.86
6551 13480 2.083628 ACCGAATAGGGTACTGAGGG 57.916 55.000 0.00 0.00 46.96 4.30
6552 13481 0.680061 CCGAATAGGGTACTGAGGGC 59.320 60.000 0.00 0.00 35.97 5.19
6553 13482 1.410004 CGAATAGGGTACTGAGGGCA 58.590 55.000 0.00 0.00 0.00 5.36
6554 13483 1.760613 CGAATAGGGTACTGAGGGCAA 59.239 52.381 0.00 0.00 0.00 4.52
6555 13484 2.483188 CGAATAGGGTACTGAGGGCAAC 60.483 54.545 0.00 0.00 0.00 4.17
6556 13485 2.570386 ATAGGGTACTGAGGGCAACT 57.430 50.000 0.00 0.00 0.00 3.16
6557 13486 2.337359 TAGGGTACTGAGGGCAACTT 57.663 50.000 0.00 0.00 0.00 2.66
6558 13487 0.984995 AGGGTACTGAGGGCAACTTC 59.015 55.000 0.00 0.00 44.40 3.01
6569 13498 4.440214 CAACTTCATTGCGCGACC 57.560 55.556 12.10 0.00 0.00 4.79
6570 13499 1.154225 CAACTTCATTGCGCGACCC 60.154 57.895 12.10 0.00 0.00 4.46
6571 13500 1.302511 AACTTCATTGCGCGACCCT 60.303 52.632 12.10 0.00 0.00 4.34
6572 13501 0.036765 AACTTCATTGCGCGACCCTA 60.037 50.000 12.10 0.00 0.00 3.53
6573 13502 0.036765 ACTTCATTGCGCGACCCTAA 60.037 50.000 12.10 0.00 0.00 2.69
6574 13503 1.083489 CTTCATTGCGCGACCCTAAA 58.917 50.000 12.10 0.00 0.00 1.85
6575 13504 0.800012 TTCATTGCGCGACCCTAAAC 59.200 50.000 12.10 0.00 0.00 2.01
6576 13505 1.060308 CATTGCGCGACCCTAAACG 59.940 57.895 12.10 0.00 0.00 3.60
6577 13506 1.079681 ATTGCGCGACCCTAAACGA 60.080 52.632 12.10 0.00 0.00 3.85
6578 13507 0.671163 ATTGCGCGACCCTAAACGAA 60.671 50.000 12.10 0.00 0.00 3.85
6579 13508 1.559149 TTGCGCGACCCTAAACGAAC 61.559 55.000 12.10 0.00 0.00 3.95
6580 13509 3.063052 GCGCGACCCTAAACGAACG 62.063 63.158 12.10 0.00 0.00 3.95
6581 13510 1.730547 CGCGACCCTAAACGAACGT 60.731 57.895 0.00 0.00 0.00 3.99
6582 13511 1.668253 CGCGACCCTAAACGAACGTC 61.668 60.000 0.00 0.00 0.00 4.34
6583 13512 1.347097 GCGACCCTAAACGAACGTCC 61.347 60.000 0.00 0.00 0.00 4.79
6584 13513 1.067199 CGACCCTAAACGAACGTCCG 61.067 60.000 0.00 0.00 0.00 4.79
6585 13514 0.733909 GACCCTAAACGAACGTCCGG 60.734 60.000 0.00 0.00 0.00 5.14
6586 13515 1.290009 CCCTAAACGAACGTCCGGT 59.710 57.895 0.00 0.00 0.00 5.28
6587 13516 0.319813 CCCTAAACGAACGTCCGGTT 60.320 55.000 1.36 1.36 42.62 4.44
6588 13517 1.501169 CCTAAACGAACGTCCGGTTT 58.499 50.000 0.78 9.64 40.29 3.27
6589 13518 1.192980 CCTAAACGAACGTCCGGTTTG 59.807 52.381 0.78 0.00 44.31 2.93
6590 13519 2.126467 CTAAACGAACGTCCGGTTTGA 58.874 47.619 0.78 0.00 41.79 2.69
6591 13520 0.652071 AAACGAACGTCCGGTTTGAC 59.348 50.000 0.00 0.00 41.79 3.18
6592 13521 1.153597 AACGAACGTCCGGTTTGACC 61.154 55.000 0.00 0.00 41.79 4.02
6603 13532 2.717580 GGTTTGACCGGATTTTGTCC 57.282 50.000 9.46 0.00 44.10 4.02
6618 13547 4.225860 TCCACTTGGGACGGTGAT 57.774 55.556 0.00 0.00 42.15 3.06
6619 13548 1.676968 TCCACTTGGGACGGTGATG 59.323 57.895 0.00 0.00 42.15 3.07
6620 13549 1.125093 TCCACTTGGGACGGTGATGT 61.125 55.000 0.00 0.00 42.15 3.06
6621 13550 0.955428 CCACTTGGGACGGTGATGTG 60.955 60.000 0.00 0.00 40.01 3.21
6622 13551 0.250295 CACTTGGGACGGTGATGTGT 60.250 55.000 0.00 0.00 36.96 3.72
6623 13552 0.472471 ACTTGGGACGGTGATGTGTT 59.528 50.000 0.00 0.00 0.00 3.32
6624 13553 1.156736 CTTGGGACGGTGATGTGTTC 58.843 55.000 0.00 0.00 0.00 3.18
6625 13554 0.601576 TTGGGACGGTGATGTGTTCG 60.602 55.000 0.00 0.00 0.00 3.95
6626 13555 1.740296 GGGACGGTGATGTGTTCGG 60.740 63.158 0.00 0.00 0.00 4.30
6627 13556 2.388232 GGACGGTGATGTGTTCGGC 61.388 63.158 0.00 0.00 0.00 5.54
6628 13557 2.358247 ACGGTGATGTGTTCGGCC 60.358 61.111 0.00 0.00 0.00 6.13
6629 13558 2.358125 CGGTGATGTGTTCGGCCA 60.358 61.111 2.24 0.00 0.00 5.36
6630 13559 1.745115 CGGTGATGTGTTCGGCCAT 60.745 57.895 2.24 0.00 0.00 4.40
6631 13560 1.802636 GGTGATGTGTTCGGCCATG 59.197 57.895 2.24 0.00 0.00 3.66
6632 13561 0.960364 GGTGATGTGTTCGGCCATGT 60.960 55.000 2.24 0.00 0.00 3.21
6633 13562 0.447801 GTGATGTGTTCGGCCATGTC 59.552 55.000 2.24 0.00 0.00 3.06
6634 13563 0.676466 TGATGTGTTCGGCCATGTCC 60.676 55.000 2.24 0.00 0.00 4.02
6641 13570 4.459331 CGGCCATGTCCGCGTTTG 62.459 66.667 0.56 0.00 43.18 2.93
6642 13571 3.361977 GGCCATGTCCGCGTTTGT 61.362 61.111 4.92 0.00 0.00 2.83
6643 13572 2.175811 GCCATGTCCGCGTTTGTC 59.824 61.111 4.92 0.00 0.00 3.18
6644 13573 2.867472 CCATGTCCGCGTTTGTCC 59.133 61.111 4.92 0.00 0.00 4.02
6645 13574 2.474266 CATGTCCGCGTTTGTCCG 59.526 61.111 4.92 0.00 0.00 4.79
6646 13575 2.029964 ATGTCCGCGTTTGTCCGT 59.970 55.556 4.92 0.00 0.00 4.69
6647 13576 1.595929 ATGTCCGCGTTTGTCCGTT 60.596 52.632 4.92 0.00 0.00 4.44
6648 13577 1.837538 ATGTCCGCGTTTGTCCGTTG 61.838 55.000 4.92 0.00 0.00 4.10
6649 13578 2.968156 TCCGCGTTTGTCCGTTGG 60.968 61.111 4.92 0.00 0.00 3.77
6650 13579 4.020378 CCGCGTTTGTCCGTTGGG 62.020 66.667 4.92 0.00 0.00 4.12
6651 13580 3.273834 CGCGTTTGTCCGTTGGGT 61.274 61.111 0.00 0.00 33.83 4.51
6652 13581 2.825975 CGCGTTTGTCCGTTGGGTT 61.826 57.895 0.00 0.00 33.83 4.11
6653 13582 1.298788 GCGTTTGTCCGTTGGGTTG 60.299 57.895 0.00 0.00 33.83 3.77
6654 13583 1.995646 GCGTTTGTCCGTTGGGTTGT 61.996 55.000 0.00 0.00 33.83 3.32
6655 13584 0.248296 CGTTTGTCCGTTGGGTTGTG 60.248 55.000 0.00 0.00 33.83 3.33
6656 13585 0.101579 GTTTGTCCGTTGGGTTGTGG 59.898 55.000 0.00 0.00 33.83 4.17
6657 13586 1.038130 TTTGTCCGTTGGGTTGTGGG 61.038 55.000 0.00 0.00 33.83 4.61
6658 13587 2.193786 GTCCGTTGGGTTGTGGGT 59.806 61.111 0.00 0.00 33.83 4.51
6659 13588 2.190841 GTCCGTTGGGTTGTGGGTG 61.191 63.158 0.00 0.00 33.83 4.61
6660 13589 2.124067 CCGTTGGGTTGTGGGTGT 60.124 61.111 0.00 0.00 0.00 4.16
6661 13590 2.485795 CCGTTGGGTTGTGGGTGTG 61.486 63.158 0.00 0.00 0.00 3.82
6662 13591 2.811799 GTTGGGTTGTGGGTGTGC 59.188 61.111 0.00 0.00 0.00 4.57
6663 13592 2.443016 TTGGGTTGTGGGTGTGCC 60.443 61.111 0.00 0.00 0.00 5.01
6684 13613 3.798380 CGCACATCCGCATCTCAA 58.202 55.556 0.00 0.00 0.00 3.02
6685 13614 2.089017 CGCACATCCGCATCTCAAA 58.911 52.632 0.00 0.00 0.00 2.69
6686 13615 0.659427 CGCACATCCGCATCTCAAAT 59.341 50.000 0.00 0.00 0.00 2.32
6687 13616 1.333524 CGCACATCCGCATCTCAAATC 60.334 52.381 0.00 0.00 0.00 2.17
6688 13617 1.672363 GCACATCCGCATCTCAAATCA 59.328 47.619 0.00 0.00 0.00 2.57
6689 13618 2.292569 GCACATCCGCATCTCAAATCAT 59.707 45.455 0.00 0.00 0.00 2.45
6690 13619 3.852205 GCACATCCGCATCTCAAATCATG 60.852 47.826 0.00 0.00 0.00 3.07
6691 13620 3.314357 CACATCCGCATCTCAAATCATGT 59.686 43.478 0.00 0.00 0.00 3.21
6692 13621 3.562973 ACATCCGCATCTCAAATCATGTC 59.437 43.478 0.00 0.00 0.00 3.06
6693 13622 2.564771 TCCGCATCTCAAATCATGTCC 58.435 47.619 0.00 0.00 0.00 4.02
6694 13623 1.262417 CCGCATCTCAAATCATGTCCG 59.738 52.381 0.00 0.00 0.00 4.79
6695 13624 1.262417 CGCATCTCAAATCATGTCCGG 59.738 52.381 0.00 0.00 0.00 5.14
6696 13625 1.605710 GCATCTCAAATCATGTCCGGG 59.394 52.381 0.00 0.00 0.00 5.73
6697 13626 2.224606 CATCTCAAATCATGTCCGGGG 58.775 52.381 0.00 0.00 0.00 5.73
6698 13627 1.285280 TCTCAAATCATGTCCGGGGT 58.715 50.000 0.00 0.00 0.00 4.95
6699 13628 1.065491 TCTCAAATCATGTCCGGGGTG 60.065 52.381 0.00 0.00 0.00 4.61
6700 13629 0.679640 TCAAATCATGTCCGGGGTGC 60.680 55.000 0.00 0.00 0.00 5.01
6701 13630 0.964860 CAAATCATGTCCGGGGTGCA 60.965 55.000 0.00 0.00 0.00 4.57
6702 13631 0.965363 AAATCATGTCCGGGGTGCAC 60.965 55.000 8.80 8.80 0.00 4.57
6703 13632 3.680620 ATCATGTCCGGGGTGCACG 62.681 63.158 11.45 0.00 0.00 5.34
6704 13633 4.697756 CATGTCCGGGGTGCACGT 62.698 66.667 11.45 0.00 0.00 4.49
6705 13634 4.697756 ATGTCCGGGGTGCACGTG 62.698 66.667 12.28 12.28 0.00 4.49
6707 13636 4.388499 GTCCGGGGTGCACGTGAT 62.388 66.667 22.23 0.00 0.00 3.06
6708 13637 3.632080 TCCGGGGTGCACGTGATT 61.632 61.111 22.23 0.00 0.00 2.57
6709 13638 2.266372 CCGGGGTGCACGTGATTA 59.734 61.111 22.23 0.98 0.00 1.75
6710 13639 1.376166 CCGGGGTGCACGTGATTAA 60.376 57.895 22.23 0.00 0.00 1.40
6711 13640 0.956410 CCGGGGTGCACGTGATTAAA 60.956 55.000 22.23 0.00 0.00 1.52
6712 13641 0.875728 CGGGGTGCACGTGATTAAAA 59.124 50.000 22.23 0.00 0.00 1.52
6713 13642 1.267261 CGGGGTGCACGTGATTAAAAA 59.733 47.619 22.23 0.00 0.00 1.94
6756 13685 7.821595 AATGCCTAAAAAGGTAAATTAACGC 57.178 32.000 0.00 0.00 0.00 4.84
6757 13686 6.328641 TGCCTAAAAAGGTAAATTAACGCA 57.671 33.333 0.00 0.00 0.00 5.24
6758 13687 6.151004 TGCCTAAAAAGGTAAATTAACGCAC 58.849 36.000 0.00 0.00 0.00 5.34
6759 13688 6.016108 TGCCTAAAAAGGTAAATTAACGCACT 60.016 34.615 0.00 0.00 0.00 4.40
6760 13689 6.864685 GCCTAAAAAGGTAAATTAACGCACTT 59.135 34.615 0.00 0.00 0.00 3.16
6761 13690 8.022550 GCCTAAAAAGGTAAATTAACGCACTTA 58.977 33.333 0.00 0.00 0.00 2.24
6762 13691 9.896263 CCTAAAAAGGTAAATTAACGCACTTAA 57.104 29.630 0.00 0.00 0.00 1.85
6793 13722 8.833493 ACTTAAAACATATATAAAGGTCACGGC 58.167 33.333 0.00 0.00 0.00 5.68
6794 13723 6.628919 AAAACATATATAAAGGTCACGGCC 57.371 37.500 0.00 0.00 0.00 6.13
6795 13724 4.967084 ACATATATAAAGGTCACGGCCA 57.033 40.909 2.24 0.00 0.00 5.36
6796 13725 4.638304 ACATATATAAAGGTCACGGCCAC 58.362 43.478 2.24 0.00 0.00 5.01
6797 13726 4.101898 ACATATATAAAGGTCACGGCCACA 59.898 41.667 2.24 0.00 0.00 4.17
6798 13727 3.637911 ATATAAAGGTCACGGCCACAA 57.362 42.857 2.24 0.00 0.00 3.33
6799 13728 2.279935 ATAAAGGTCACGGCCACAAA 57.720 45.000 2.24 0.00 0.00 2.83
6800 13729 2.054232 TAAAGGTCACGGCCACAAAA 57.946 45.000 2.24 0.00 0.00 2.44
6801 13730 0.458260 AAAGGTCACGGCCACAAAAC 59.542 50.000 2.24 0.00 0.00 2.43
6802 13731 1.720694 AAGGTCACGGCCACAAAACG 61.721 55.000 2.24 0.00 0.00 3.60
6803 13732 2.330041 GTCACGGCCACAAAACGG 59.670 61.111 2.24 0.00 0.00 4.44
6804 13733 2.124653 TCACGGCCACAAAACGGT 60.125 55.556 2.24 0.00 0.00 4.83
6805 13734 2.181521 TCACGGCCACAAAACGGTC 61.182 57.895 2.24 0.00 0.00 4.79
6806 13735 2.903350 ACGGCCACAAAACGGTCC 60.903 61.111 2.24 0.00 0.00 4.46
6807 13736 2.902846 CGGCCACAAAACGGTCCA 60.903 61.111 2.24 0.00 0.00 4.02
6808 13737 2.903547 CGGCCACAAAACGGTCCAG 61.904 63.158 2.24 0.00 0.00 3.86
6809 13738 1.826487 GGCCACAAAACGGTCCAGT 60.826 57.895 0.00 0.00 0.00 4.00
6810 13739 1.388837 GGCCACAAAACGGTCCAGTT 61.389 55.000 0.00 0.00 35.59 3.16
6811 13740 0.458260 GCCACAAAACGGTCCAGTTT 59.542 50.000 6.15 6.15 45.21 2.66
6812 13741 1.677052 GCCACAAAACGGTCCAGTTTA 59.323 47.619 10.80 0.00 42.81 2.01
6813 13742 2.099427 GCCACAAAACGGTCCAGTTTAA 59.901 45.455 10.80 0.00 42.81 1.52
6814 13743 3.243602 GCCACAAAACGGTCCAGTTTAAT 60.244 43.478 10.80 2.54 42.81 1.40
6815 13744 4.295051 CCACAAAACGGTCCAGTTTAATG 58.705 43.478 10.80 11.24 42.81 1.90
6816 13745 3.733727 CACAAAACGGTCCAGTTTAATGC 59.266 43.478 10.80 0.00 42.81 3.56
6817 13746 3.243602 ACAAAACGGTCCAGTTTAATGCC 60.244 43.478 10.80 0.00 42.81 4.40
6818 13747 1.161843 AACGGTCCAGTTTAATGCCG 58.838 50.000 0.00 0.00 44.10 5.69
6819 13748 1.303091 ACGGTCCAGTTTAATGCCGC 61.303 55.000 0.00 0.00 42.51 6.53
6820 13749 1.302383 CGGTCCAGTTTAATGCCGCA 61.302 55.000 0.00 0.00 32.73 5.69
6821 13750 0.170339 GGTCCAGTTTAATGCCGCAC 59.830 55.000 0.00 0.00 0.00 5.34
6822 13751 1.165270 GTCCAGTTTAATGCCGCACT 58.835 50.000 0.00 0.00 0.00 4.40
6823 13752 1.539827 GTCCAGTTTAATGCCGCACTT 59.460 47.619 0.00 0.00 0.00 3.16
6824 13753 2.745281 GTCCAGTTTAATGCCGCACTTA 59.255 45.455 0.00 0.00 0.00 2.24
6825 13754 3.189702 GTCCAGTTTAATGCCGCACTTAA 59.810 43.478 0.00 0.00 0.00 1.85
6826 13755 3.821600 TCCAGTTTAATGCCGCACTTAAA 59.178 39.130 0.00 6.01 0.00 1.52
6827 13756 3.917985 CCAGTTTAATGCCGCACTTAAAC 59.082 43.478 24.96 24.96 43.36 2.01
6828 13757 3.602062 CAGTTTAATGCCGCACTTAAACG 59.398 43.478 25.36 20.71 45.70 3.60
6833 13762 3.335513 CCGCACTTAAACGGCACA 58.664 55.556 0.00 0.00 43.44 4.57
6834 13763 1.206578 CCGCACTTAAACGGCACAG 59.793 57.895 0.00 0.00 43.44 3.66
6835 13764 1.503818 CCGCACTTAAACGGCACAGT 61.504 55.000 0.00 0.00 43.44 3.55
6836 13765 0.306533 CGCACTTAAACGGCACAGTT 59.693 50.000 0.00 0.00 35.59 3.16
6837 13766 1.659211 CGCACTTAAACGGCACAGTTC 60.659 52.381 0.00 0.00 32.43 3.01
6838 13767 1.334689 GCACTTAAACGGCACAGTTCC 60.335 52.381 0.00 0.00 32.43 3.62
6839 13768 1.944024 CACTTAAACGGCACAGTTCCA 59.056 47.619 0.00 0.00 32.43 3.53
6840 13769 2.552315 CACTTAAACGGCACAGTTCCAT 59.448 45.455 0.00 0.00 32.43 3.41
6841 13770 3.749088 CACTTAAACGGCACAGTTCCATA 59.251 43.478 0.00 0.00 32.43 2.74
6842 13771 4.214545 CACTTAAACGGCACAGTTCCATAA 59.785 41.667 0.00 0.00 32.43 1.90
6843 13772 5.007682 ACTTAAACGGCACAGTTCCATAAT 58.992 37.500 0.00 0.00 32.43 1.28
6844 13773 5.475564 ACTTAAACGGCACAGTTCCATAATT 59.524 36.000 0.00 0.00 32.43 1.40
6845 13774 6.655848 ACTTAAACGGCACAGTTCCATAATTA 59.344 34.615 0.00 0.00 32.43 1.40
6846 13775 5.968528 AAACGGCACAGTTCCATAATTAA 57.031 34.783 0.00 0.00 32.43 1.40
6847 13776 4.957759 ACGGCACAGTTCCATAATTAAC 57.042 40.909 0.00 0.00 0.00 2.01
6848 13777 4.328536 ACGGCACAGTTCCATAATTAACA 58.671 39.130 0.00 0.00 0.00 2.41
6849 13778 4.947388 ACGGCACAGTTCCATAATTAACAT 59.053 37.500 0.00 0.00 0.00 2.71
6850 13779 6.116806 ACGGCACAGTTCCATAATTAACATA 58.883 36.000 0.00 0.00 0.00 2.29
6851 13780 6.600032 ACGGCACAGTTCCATAATTAACATAA 59.400 34.615 0.00 0.00 0.00 1.90
6852 13781 7.121463 ACGGCACAGTTCCATAATTAACATAAA 59.879 33.333 0.00 0.00 0.00 1.40
6853 13782 7.971168 CGGCACAGTTCCATAATTAACATAAAA 59.029 33.333 0.00 0.00 0.00 1.52
6854 13783 9.646427 GGCACAGTTCCATAATTAACATAAAAA 57.354 29.630 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
186 196 3.342627 TTGAAAGCCGCCGTGACG 61.343 61.111 0.00 0.00 0.00 4.35
188 198 1.525077 AAGTTGAAAGCCGCCGTGA 60.525 52.632 0.00 0.00 0.00 4.35
198 208 3.817084 CTGTCATGGAGAGCAAGTTGAAA 59.183 43.478 7.16 0.00 0.00 2.69
200 210 2.289882 CCTGTCATGGAGAGCAAGTTGA 60.290 50.000 7.16 0.00 0.00 3.18
202 212 1.701847 ACCTGTCATGGAGAGCAAGTT 59.298 47.619 0.00 0.00 0.00 2.66
203 213 1.002888 CACCTGTCATGGAGAGCAAGT 59.997 52.381 0.00 0.00 0.00 3.16
205 215 0.325933 CCACCTGTCATGGAGAGCAA 59.674 55.000 0.00 0.00 39.87 3.91
219 229 3.728373 GTGAATCGGGCCCCACCT 61.728 66.667 18.66 0.00 39.10 4.00
229 239 1.078426 GGTGGGACTGGGTGAATCG 60.078 63.158 0.00 0.00 0.00 3.34
238 248 4.704833 CACTGGCCGGTGGGACTG 62.705 72.222 33.61 10.03 44.25 3.51
396 417 1.193462 ACCACGTTATCCCCGGTCAA 61.193 55.000 0.00 0.00 0.00 3.18
422 443 0.751643 CGGCCTTTATTCACTGGGGG 60.752 60.000 0.00 0.00 0.00 5.40
457 478 0.108424 CGAACTGCTCCTCCTTCCTG 60.108 60.000 0.00 0.00 0.00 3.86
463 484 0.249911 ACAACACGAACTGCTCCTCC 60.250 55.000 0.00 0.00 0.00 4.30
464 485 1.140816 GACAACACGAACTGCTCCTC 58.859 55.000 0.00 0.00 0.00 3.71
465 486 0.597637 CGACAACACGAACTGCTCCT 60.598 55.000 0.00 0.00 35.09 3.69
618 652 4.129737 TGCTGCGAGTAGGCGGTC 62.130 66.667 0.00 0.00 41.43 4.79
619 653 4.135153 CTGCTGCGAGTAGGCGGT 62.135 66.667 0.00 0.00 41.43 5.68
648 682 1.467713 GCAGGAGTGTGCTCGTACTAC 60.468 57.143 0.00 0.00 42.53 2.73
649 683 0.809385 GCAGGAGTGTGCTCGTACTA 59.191 55.000 0.00 0.00 42.53 1.82
650 684 1.587054 GCAGGAGTGTGCTCGTACT 59.413 57.895 0.00 0.00 42.53 2.73
801 839 2.683968 CTGGCGCCGATATAAAAGCTA 58.316 47.619 23.90 0.00 0.00 3.32
823 861 3.697439 TATCCCACTGGCGCTTGGC 62.697 63.158 7.64 0.00 42.51 4.52
1083 1124 2.098293 CAGGAAATGCTGCGGGTAC 58.902 57.895 0.00 0.00 0.00 3.34
1250 1291 2.527951 CTTCCTCTTGCCCTCCACCG 62.528 65.000 0.00 0.00 0.00 4.94
1465 1506 1.152074 TCGGGGGTGTGGGTAAGAA 60.152 57.895 0.00 0.00 0.00 2.52
1466 1507 1.914764 GTCGGGGGTGTGGGTAAGA 60.915 63.158 0.00 0.00 0.00 2.10
1467 1508 1.486145 AAGTCGGGGGTGTGGGTAAG 61.486 60.000 0.00 0.00 0.00 2.34
1468 1509 1.461849 AAGTCGGGGGTGTGGGTAA 60.462 57.895 0.00 0.00 0.00 2.85
1469 1510 2.204889 AAGTCGGGGGTGTGGGTA 59.795 61.111 0.00 0.00 0.00 3.69
1482 1523 2.666989 GCTACGGCTAGCACAAGTC 58.333 57.895 18.24 0.00 44.45 3.01
1496 1537 3.128938 ACGTGAAGTGTGGATCTAGCTAC 59.871 47.826 0.00 0.00 0.00 3.58
1552 1593 1.154016 GAGAGTCAACGCTAGCGCA 60.154 57.895 35.63 18.00 44.19 6.09
1573 1614 1.071239 GCACGCATTGTATACGCAGAG 60.071 52.381 0.00 0.00 0.00 3.35
1784 1830 1.135632 GTACTCTGTCACGCTGAGACC 60.136 57.143 7.86 0.00 43.31 3.85
1806 1860 5.073311 TCTGTGTAATCACTCTTACCTGC 57.927 43.478 0.00 0.00 44.14 4.85
1848 1902 1.007964 CTCCTGCGTCTATCAGCCG 60.008 63.158 0.00 0.00 0.00 5.52
1877 1931 6.404734 GCCGGTTTTGCTTAGTACTACTACTA 60.405 42.308 1.90 0.00 34.79 1.82
1878 1932 5.623141 GCCGGTTTTGCTTAGTACTACTACT 60.623 44.000 1.90 0.00 37.04 2.57
1879 1933 4.564372 GCCGGTTTTGCTTAGTACTACTAC 59.436 45.833 1.90 0.00 28.93 2.73
1915 2271 2.633488 GGCATCAAACCACTCTACTCC 58.367 52.381 0.00 0.00 0.00 3.85
2010 2366 3.120121 GCGAGTGTTTATTTGCTTTGCTG 59.880 43.478 0.00 0.00 0.00 4.41
2019 2375 6.250527 GCACATTAAATCGCGAGTGTTTATTT 59.749 34.615 16.66 10.83 0.00 1.40
2020 2376 5.737290 GCACATTAAATCGCGAGTGTTTATT 59.263 36.000 16.66 8.41 0.00 1.40
2021 2377 5.263185 GCACATTAAATCGCGAGTGTTTAT 58.737 37.500 16.66 5.36 0.00 1.40
2022 2378 4.643953 GCACATTAAATCGCGAGTGTTTA 58.356 39.130 16.66 12.04 0.00 2.01
2069 2425 3.894547 AACACGGCCTACCCAAGCG 62.895 63.158 0.00 0.00 0.00 4.68
2086 2442 1.303561 CCAGTGCCAAGCTAGCCAA 60.304 57.895 12.13 0.00 0.00 4.52
2088 2444 3.136791 GCCAGTGCCAAGCTAGCC 61.137 66.667 12.13 0.00 0.00 3.93
2187 2543 0.398696 TGAATACCCAACAGTGGCGT 59.601 50.000 0.00 0.00 44.46 5.68
2241 2600 7.499563 AGCATCTATCAGTAACCGTATATCGAT 59.500 37.037 2.16 2.16 42.86 3.59
2256 2615 7.737972 ACTACACTGTACTAGCATCTATCAG 57.262 40.000 0.00 0.00 0.00 2.90
2269 2628 5.529791 CCCATGCATAGTACTACACTGTAC 58.470 45.833 4.31 0.00 42.09 2.90
2279 2638 1.276421 AGATCCGCCCATGCATAGTAC 59.724 52.381 0.00 0.00 37.32 2.73
2280 2639 1.276138 CAGATCCGCCCATGCATAGTA 59.724 52.381 0.00 0.00 37.32 1.82
2281 2640 0.035881 CAGATCCGCCCATGCATAGT 59.964 55.000 0.00 0.00 37.32 2.12
2282 2641 0.675837 CCAGATCCGCCCATGCATAG 60.676 60.000 0.00 0.00 37.32 2.23
2283 2642 1.376086 CCAGATCCGCCCATGCATA 59.624 57.895 0.00 0.00 37.32 3.14
2284 2643 2.114625 CCAGATCCGCCCATGCAT 59.885 61.111 0.00 0.00 37.32 3.96
2602 3012 1.306997 TAGCAGAAGGGGACTGGGG 60.307 63.158 0.00 0.00 42.68 4.96
2818 3504 3.274288 TGCAAACACAAATTGGGGTTTC 58.726 40.909 10.39 6.69 19.77 2.78
2831 3517 3.904136 AACAGTAGCATCTGCAAACAC 57.096 42.857 4.79 0.00 45.16 3.32
3090 3811 0.748450 TACATAGTACCAGTGGCGGC 59.252 55.000 9.78 0.00 0.00 6.53
3134 3855 4.580580 GCCCTTAATAAGTCACCATTCTGG 59.419 45.833 0.00 0.00 45.02 3.86
3144 3865 3.343617 TGCACAGTGCCCTTAATAAGTC 58.656 45.455 23.06 0.00 44.23 3.01
3156 3877 2.292569 CCATATCTCCAATGCACAGTGC 59.707 50.000 19.37 19.37 45.29 4.40
3157 3878 2.292569 GCCATATCTCCAATGCACAGTG 59.707 50.000 0.00 0.00 0.00 3.66
3201 3922 2.482142 CCGAGTACCTTCAGAATCTGGC 60.482 54.545 10.71 0.00 31.51 4.85
3210 3931 1.345415 GGGTTTGACCGAGTACCTTCA 59.655 52.381 0.00 0.00 39.83 3.02
3246 3967 5.447010 CGCTACTACGCTAGGTATGTATTCC 60.447 48.000 0.00 0.00 0.00 3.01
3247 3968 5.447010 CCGCTACTACGCTAGGTATGTATTC 60.447 48.000 0.00 0.00 0.00 1.75
3248 3969 4.394300 CCGCTACTACGCTAGGTATGTATT 59.606 45.833 0.00 0.00 0.00 1.89
3249 3970 3.937706 CCGCTACTACGCTAGGTATGTAT 59.062 47.826 0.00 0.00 0.00 2.29
3250 3971 3.244215 ACCGCTACTACGCTAGGTATGTA 60.244 47.826 0.00 0.00 0.00 2.29
3251 3972 2.149578 CCGCTACTACGCTAGGTATGT 58.850 52.381 0.00 0.00 0.00 2.29
3284 4005 0.454957 CGTGGCGCATTTTCCTCTTG 60.455 55.000 10.83 0.00 0.00 3.02
3341 4062 2.485479 CCACACAGCTAACAACTGGAGT 60.485 50.000 0.00 0.00 39.55 3.85
3393 4115 4.422073 TCCTCACCAGCAATTATACCTG 57.578 45.455 0.00 0.00 0.00 4.00
3443 5928 1.130561 GCACCAGTTAACTGATTCGCC 59.869 52.381 32.50 13.11 46.59 5.54
3452 5937 5.065988 ACATATTTGATCGGCACCAGTTAAC 59.934 40.000 0.00 0.00 0.00 2.01
3476 5961 4.346129 GCTAACTAAAGTAAGCGCGACTA 58.654 43.478 12.10 0.00 0.00 2.59
3482 5967 2.608090 GCCAGGCTAACTAAAGTAAGCG 59.392 50.000 3.29 0.00 35.79 4.68
3483 5968 2.608090 CGCCAGGCTAACTAAAGTAAGC 59.392 50.000 10.54 0.00 0.00 3.09
3484 5969 3.858247 ACGCCAGGCTAACTAAAGTAAG 58.142 45.455 10.54 0.00 0.00 2.34
3486 5971 5.829924 ACTATACGCCAGGCTAACTAAAGTA 59.170 40.000 10.54 1.78 0.00 2.24
3487 5972 4.648307 ACTATACGCCAGGCTAACTAAAGT 59.352 41.667 10.54 0.00 0.00 2.66
3488 5973 5.197682 ACTATACGCCAGGCTAACTAAAG 57.802 43.478 10.54 0.38 0.00 1.85
3489 5974 6.294899 CCATACTATACGCCAGGCTAACTAAA 60.295 42.308 10.54 0.00 0.00 1.85
3513 6002 6.040166 TGAAGATCAGGGAAAGTACGTATACC 59.960 42.308 0.00 0.00 30.88 2.73
3528 6020 5.404466 AAGTCTGAACTCTGAAGATCAGG 57.596 43.478 11.33 1.82 46.83 3.86
3632 6125 8.387354 TGCATCAGTGATTTACAAAGTATAACG 58.613 33.333 1.86 0.00 0.00 3.18
3637 6130 7.361971 CCACATGCATCAGTGATTTACAAAGTA 60.362 37.037 16.55 0.00 37.97 2.24
3648 6141 2.703416 GAAGTCCACATGCATCAGTGA 58.297 47.619 16.55 0.00 37.97 3.41
3653 6146 2.350522 ACTTCGAAGTCCACATGCATC 58.649 47.619 24.93 0.00 32.86 3.91
3713 6206 6.472887 TCAACTACATAAGGAAAAGACCCTG 58.527 40.000 0.00 0.00 33.55 4.45
3809 6352 8.993424 GGAGTGGTATCCATATATTATTGGACT 58.007 37.037 8.72 0.00 44.49 3.85
3816 6359 6.738635 ACGAGGGAGTGGTATCCATATATTA 58.261 40.000 0.00 0.00 41.52 0.98
3820 6363 3.544698 ACGAGGGAGTGGTATCCATAT 57.455 47.619 0.00 0.00 41.52 1.78
3824 6490 1.136500 GTGAACGAGGGAGTGGTATCC 59.864 57.143 0.00 0.00 38.76 2.59
3825 6491 1.822990 TGTGAACGAGGGAGTGGTATC 59.177 52.381 0.00 0.00 0.00 2.24
3826 6492 1.933021 TGTGAACGAGGGAGTGGTAT 58.067 50.000 0.00 0.00 0.00 2.73
3829 6495 2.185004 ATTTGTGAACGAGGGAGTGG 57.815 50.000 0.00 0.00 0.00 4.00
3830 6496 6.338146 TCTTATATTTGTGAACGAGGGAGTG 58.662 40.000 0.00 0.00 0.00 3.51
3928 7066 6.769512 AGCTGTTAGACAAACTATTTCCTCA 58.230 36.000 0.00 0.00 38.99 3.86
3967 7262 2.654749 AGAAATCGATGACGTGCAGA 57.345 45.000 0.00 0.00 40.69 4.26
4035 7330 4.898829 TCAGACACACAAATCCACAAAG 57.101 40.909 0.00 0.00 0.00 2.77
4041 7336 2.420022 CCCGAATCAGACACACAAATCC 59.580 50.000 0.00 0.00 0.00 3.01
4059 7354 3.901844 TCTCTGTATTTCCTATTCCCCCG 59.098 47.826 0.00 0.00 0.00 5.73
4069 7365 9.832445 TGTTTATTAGGATGTCTCTGTATTTCC 57.168 33.333 0.00 0.00 0.00 3.13
4073 7369 8.938883 ACCATGTTTATTAGGATGTCTCTGTAT 58.061 33.333 0.00 0.00 0.00 2.29
4074 7370 8.319057 ACCATGTTTATTAGGATGTCTCTGTA 57.681 34.615 0.00 0.00 0.00 2.74
4075 7371 7.092891 TGACCATGTTTATTAGGATGTCTCTGT 60.093 37.037 0.00 0.00 0.00 3.41
4076 7372 7.275183 TGACCATGTTTATTAGGATGTCTCTG 58.725 38.462 0.00 0.00 0.00 3.35
4078 7374 8.506168 TTTGACCATGTTTATTAGGATGTCTC 57.494 34.615 0.00 0.00 0.00 3.36
4137 7433 3.492421 AAGTGTTGGCGAAATAGCATG 57.508 42.857 0.00 0.00 39.27 4.06
4195 7491 4.657436 ACTAGCTACATTTCTCTTCGGG 57.343 45.455 0.00 0.00 0.00 5.14
4202 7498 8.256356 ACCTCATGATTACTAGCTACATTTCT 57.744 34.615 0.00 0.00 0.00 2.52
4238 7534 4.618227 CGAGGCAAAGAAAAACAATAGGGG 60.618 45.833 0.00 0.00 0.00 4.79
4457 7791 6.570672 ATGTCCAAGCATAGAATAAGCATG 57.429 37.500 0.00 0.00 37.83 4.06
4505 7839 9.592196 AACTGCAAAATGATAATACCATAGGAT 57.408 29.630 0.00 0.00 0.00 3.24
4521 7855 6.753897 GTTTCTCAATCGAAACTGCAAAAT 57.246 33.333 8.66 0.00 45.71 1.82
4533 7867 8.443160 TGCTTAGAAATACTTGTTTCTCAATCG 58.557 33.333 4.43 0.00 43.09 3.34
4540 7874 8.780249 TGGTAGTTGCTTAGAAATACTTGTTTC 58.220 33.333 0.00 0.00 38.16 2.78
4616 7950 9.236691 CCGTTGGTAATAATCAGATCAAAATTG 57.763 33.333 0.00 0.00 0.00 2.32
4630 7964 3.420300 TTGGTCAGCCGTTGGTAATAA 57.580 42.857 0.00 0.00 37.67 1.40
4649 7983 8.919661 CGGTCGACTTAGAAATAGTTACTTTTT 58.080 33.333 16.46 0.65 0.00 1.94
4653 7987 6.458070 GCTCGGTCGACTTAGAAATAGTTACT 60.458 42.308 16.46 0.00 0.00 2.24
4654 7988 5.680667 GCTCGGTCGACTTAGAAATAGTTAC 59.319 44.000 16.46 0.00 0.00 2.50
4655 7989 5.220931 GGCTCGGTCGACTTAGAAATAGTTA 60.221 44.000 16.46 0.00 0.00 2.24
4656 7990 4.439837 GGCTCGGTCGACTTAGAAATAGTT 60.440 45.833 16.46 0.00 0.00 2.24
4657 7991 3.066481 GGCTCGGTCGACTTAGAAATAGT 59.934 47.826 16.46 0.00 0.00 2.12
4664 7998 1.948145 ACTATGGCTCGGTCGACTTAG 59.052 52.381 16.46 13.69 0.00 2.18
4674 8008 7.387673 TGTTATAATTGGAATGACTATGGCTCG 59.612 37.037 0.00 0.00 0.00 5.03
4681 8015 7.773224 CCCACTGTGTTATAATTGGAATGACTA 59.227 37.037 7.08 0.00 0.00 2.59
4687 8021 7.287061 CCTATCCCACTGTGTTATAATTGGAA 58.713 38.462 7.08 0.00 0.00 3.53
4701 8035 2.175878 GCATACAGCCTATCCCACTG 57.824 55.000 0.00 0.00 37.23 3.66
4758 9712 3.978687 GGATGACGTCCGTGATCTTAAT 58.021 45.455 14.12 0.00 38.49 1.40
4759 9713 3.431922 GGATGACGTCCGTGATCTTAA 57.568 47.619 14.12 0.00 38.49 1.85
4799 9755 6.601217 AGAAGAAAAAGAAGAAGAAGCACAGT 59.399 34.615 0.00 0.00 0.00 3.55
4830 9800 0.031994 GCAGCTTCCCGCAAGAAAAA 59.968 50.000 0.00 0.00 42.61 1.94
4831 9801 0.823356 AGCAGCTTCCCGCAAGAAAA 60.823 50.000 0.00 0.00 42.61 2.29
4832 9802 1.228245 AGCAGCTTCCCGCAAGAAA 60.228 52.632 0.00 0.00 42.61 2.52
4833 9803 1.968017 CAGCAGCTTCCCGCAAGAA 60.968 57.895 0.00 0.00 42.61 2.52
4834 9804 2.359107 CAGCAGCTTCCCGCAAGA 60.359 61.111 0.00 0.00 42.61 3.02
4835 9805 2.670934 ACAGCAGCTTCCCGCAAG 60.671 61.111 0.00 0.00 42.61 4.01
4944 9966 2.840651 CTCCAACTGTTCCAGGATACCT 59.159 50.000 0.00 0.00 35.51 3.08
4958 9980 1.492993 GGTCTGGCCCTTCTCCAACT 61.493 60.000 0.00 0.00 32.41 3.16
4959 9981 1.002011 GGTCTGGCCCTTCTCCAAC 60.002 63.158 0.00 0.00 32.41 3.77
4961 9983 1.920325 CAGGTCTGGCCCTTCTCCA 60.920 63.158 0.00 0.00 38.26 3.86
5006 10031 5.057149 GGATTACCAAGCTTCGTATCACAT 58.943 41.667 4.70 0.00 35.97 3.21
5015 10040 2.716217 ACTGCAGGATTACCAAGCTTC 58.284 47.619 19.93 0.00 39.22 3.86
5023 10048 7.338449 TGGGAAACTAAATAACTGCAGGATTAC 59.662 37.037 19.93 0.00 0.00 1.89
5031 10056 6.016610 TGACTTGTGGGAAACTAAATAACTGC 60.017 38.462 0.00 0.00 0.00 4.40
5039 10071 4.444306 CCTCAGTGACTTGTGGGAAACTAA 60.444 45.833 0.00 0.00 0.00 2.24
5071 10103 1.164411 CGCCAACCTGATGCAAAGTA 58.836 50.000 0.00 0.00 0.00 2.24
5074 10106 1.035923 TTTCGCCAACCTGATGCAAA 58.964 45.000 0.00 0.00 0.00 3.68
5112 10144 1.327303 ACGTACGTGTAAAGGTGGGA 58.673 50.000 22.14 0.00 0.00 4.37
5135 10167 3.547054 AAACCCTAGTGAAACACGACA 57.453 42.857 0.00 0.00 41.43 4.35
5136 10168 4.095334 ACAAAAACCCTAGTGAAACACGAC 59.905 41.667 0.00 0.00 41.43 4.34
5138 10170 4.095185 TCACAAAAACCCTAGTGAAACACG 59.905 41.667 0.00 0.00 41.43 4.49
5165 10198 1.002033 GACTGCAGCTTTTGTCCACAG 60.002 52.381 15.27 0.00 0.00 3.66
5172 10205 1.802960 AGACGATGACTGCAGCTTTTG 59.197 47.619 15.27 4.86 0.00 2.44
5227 10260 2.222819 CGCTGGAAATTAACTCGAGTGC 60.223 50.000 20.85 13.41 0.00 4.40
5236 10269 3.189495 TCGTCATTTGCGCTGGAAATTAA 59.811 39.130 9.73 0.00 0.00 1.40
5237 10270 2.744741 TCGTCATTTGCGCTGGAAATTA 59.255 40.909 9.73 0.00 0.00 1.40
5238 10271 1.539388 TCGTCATTTGCGCTGGAAATT 59.461 42.857 9.73 0.00 0.00 1.82
5239 10272 1.131126 CTCGTCATTTGCGCTGGAAAT 59.869 47.619 9.73 3.33 0.00 2.17
5263 10296 3.042887 GTTTCGGCATGTTTGTGAGTTC 58.957 45.455 0.00 0.00 0.00 3.01
5320 10353 2.745100 AGGCTACGAGACGCACGA 60.745 61.111 0.00 0.00 34.70 4.35
5321 10354 2.324332 ATCAGGCTACGAGACGCACG 62.324 60.000 0.00 0.00 0.00 5.34
5322 10355 0.592754 GATCAGGCTACGAGACGCAC 60.593 60.000 0.00 0.00 0.00 5.34
5323 10356 0.748367 AGATCAGGCTACGAGACGCA 60.748 55.000 0.00 0.00 0.00 5.24
5324 10357 0.317436 CAGATCAGGCTACGAGACGC 60.317 60.000 0.00 0.00 0.00 5.19
5325 10358 0.317436 GCAGATCAGGCTACGAGACG 60.317 60.000 0.00 0.00 0.00 4.18
5326 10359 0.741326 TGCAGATCAGGCTACGAGAC 59.259 55.000 10.25 0.00 0.00 3.36
5327 10360 0.741326 GTGCAGATCAGGCTACGAGA 59.259 55.000 10.25 0.00 0.00 4.04
5328 10361 0.743688 AGTGCAGATCAGGCTACGAG 59.256 55.000 10.25 0.00 0.00 4.18
5329 10362 1.950216 CTAGTGCAGATCAGGCTACGA 59.050 52.381 10.25 3.87 0.00 3.43
5373 10421 9.996554 AGTTGCATGCAAACTACTGTATATATA 57.003 29.630 33.42 3.50 37.70 0.86
5374 10422 8.908786 AGTTGCATGCAAACTACTGTATATAT 57.091 30.769 33.42 1.83 37.70 0.86
5408 10456 0.887933 ACCCCTGCAACAATTAAGCG 59.112 50.000 0.00 0.00 0.00 4.68
5550 10598 4.161295 TGGAGCGGGCGGAGAATG 62.161 66.667 0.00 0.00 0.00 2.67
5722 10797 3.855853 GCCGGAAGAGGAGCTCCC 61.856 72.222 29.54 19.90 36.42 4.30
5923 10998 0.249489 CCCATGCTGCGTACTACTCC 60.249 60.000 0.00 0.00 0.00 3.85
5924 10999 0.876342 GCCCATGCTGCGTACTACTC 60.876 60.000 0.00 0.00 33.53 2.59
5925 11000 1.144057 GCCCATGCTGCGTACTACT 59.856 57.895 0.00 0.00 33.53 2.57
5926 11001 2.237751 CGCCCATGCTGCGTACTAC 61.238 63.158 16.80 0.00 46.59 2.73
5927 11002 2.106131 CGCCCATGCTGCGTACTA 59.894 61.111 16.80 0.00 46.59 1.82
6038 11113 1.340114 CCGGGGGAGAAGAAAAGAAGG 60.340 57.143 0.00 0.00 0.00 3.46
6047 11123 2.751837 GCTTTGCCGGGGGAGAAG 60.752 66.667 2.18 0.00 0.00 2.85
6058 11135 0.246360 ATTTACTTGGGGCGCTTTGC 59.754 50.000 7.64 0.00 45.38 3.68
6090 11167 2.939103 CTCGAATTAACCCAAGCTGGAG 59.061 50.000 0.00 0.00 40.96 3.86
6095 11172 4.023707 CCATGATCTCGAATTAACCCAAGC 60.024 45.833 0.00 0.00 0.00 4.01
6101 11178 2.480419 CCGCCCATGATCTCGAATTAAC 59.520 50.000 0.00 0.00 0.00 2.01
6125 11202 3.818787 CAGCATGCAAGACCGCCC 61.819 66.667 21.98 0.00 0.00 6.13
6126 11203 3.044059 GACAGCATGCAAGACCGCC 62.044 63.158 21.98 0.00 42.53 6.13
6127 11204 1.651240 ATGACAGCATGCAAGACCGC 61.651 55.000 21.98 2.22 42.53 5.68
6164 11241 2.398554 CCATTCAGTTCACCCCGCG 61.399 63.158 0.00 0.00 0.00 6.46
6165 11242 0.608035 TTCCATTCAGTTCACCCCGC 60.608 55.000 0.00 0.00 0.00 6.13
6193 11270 0.904865 ACCGGAGCTTCTGTGATGGA 60.905 55.000 9.46 0.00 0.00 3.41
6220 11297 2.615447 CAGCCAACCATATGCTGTACTG 59.385 50.000 0.00 3.69 45.69 2.74
6334 13254 1.622607 TAGGTTCCCATGGACCAGCG 61.623 60.000 21.52 1.47 0.00 5.18
6336 13256 1.070758 CGATAGGTTCCCATGGACCAG 59.929 57.143 21.52 8.56 0.00 4.00
6431 13360 1.152881 AGGATCTGGGAAATGCGCC 60.153 57.895 4.18 0.00 0.00 6.53
6505 13434 0.387750 GCAAGTAGCAAGCACAAGCC 60.388 55.000 0.00 0.00 44.79 4.35
6521 13450 4.164981 ACCCTATTCGGTATGGATAGCAA 58.835 43.478 0.00 0.00 33.04 3.91
6540 13469 0.690762 TGAAGTTGCCCTCAGTACCC 59.309 55.000 0.00 0.00 0.00 3.69
6552 13481 1.154225 GGGTCGCGCAATGAAGTTG 60.154 57.895 8.75 0.00 40.90 3.16
6553 13482 0.036765 TAGGGTCGCGCAATGAAGTT 60.037 50.000 8.75 0.00 0.00 2.66
6554 13483 0.036765 TTAGGGTCGCGCAATGAAGT 60.037 50.000 8.75 0.00 0.00 3.01
6555 13484 1.083489 TTTAGGGTCGCGCAATGAAG 58.917 50.000 8.75 0.00 0.00 3.02
6556 13485 0.800012 GTTTAGGGTCGCGCAATGAA 59.200 50.000 8.75 0.00 0.00 2.57
6557 13486 1.355796 CGTTTAGGGTCGCGCAATGA 61.356 55.000 8.75 0.00 0.00 2.57
6558 13487 1.060308 CGTTTAGGGTCGCGCAATG 59.940 57.895 8.75 0.00 0.00 2.82
6559 13488 0.671163 TTCGTTTAGGGTCGCGCAAT 60.671 50.000 8.75 0.00 0.00 3.56
6560 13489 1.300775 TTCGTTTAGGGTCGCGCAA 60.301 52.632 8.75 0.00 0.00 4.85
6561 13490 2.023223 GTTCGTTTAGGGTCGCGCA 61.023 57.895 8.75 0.00 0.00 6.09
6562 13491 2.774126 GTTCGTTTAGGGTCGCGC 59.226 61.111 0.00 0.00 0.00 6.86
6563 13492 1.668253 GACGTTCGTTTAGGGTCGCG 61.668 60.000 0.00 0.00 0.00 5.87
6564 13493 1.347097 GGACGTTCGTTTAGGGTCGC 61.347 60.000 0.00 0.00 0.00 5.19
6565 13494 1.067199 CGGACGTTCGTTTAGGGTCG 61.067 60.000 8.45 0.00 0.00 4.79
6566 13495 0.733909 CCGGACGTTCGTTTAGGGTC 60.734 60.000 16.40 0.00 0.00 4.46
6567 13496 1.290009 CCGGACGTTCGTTTAGGGT 59.710 57.895 16.40 0.00 0.00 4.34
6568 13497 0.319813 AACCGGACGTTCGTTTAGGG 60.320 55.000 16.40 0.45 0.00 3.53
6569 13498 1.192980 CAAACCGGACGTTCGTTTAGG 59.807 52.381 16.40 1.26 31.78 2.69
6570 13499 2.097250 GTCAAACCGGACGTTCGTTTAG 60.097 50.000 16.40 1.68 31.78 1.85
6571 13500 1.857837 GTCAAACCGGACGTTCGTTTA 59.142 47.619 16.40 0.00 31.78 2.01
6572 13501 0.652071 GTCAAACCGGACGTTCGTTT 59.348 50.000 16.40 12.55 31.78 3.60
6573 13502 1.153597 GGTCAAACCGGACGTTCGTT 61.154 55.000 16.40 6.87 38.70 3.85
6574 13503 1.592400 GGTCAAACCGGACGTTCGT 60.592 57.895 16.40 0.00 38.70 3.85
6575 13504 3.237290 GGTCAAACCGGACGTTCG 58.763 61.111 9.46 9.95 38.70 3.95
6584 13513 2.717580 GGACAAAATCCGGTCAAACC 57.282 50.000 0.00 0.00 37.88 3.27
6601 13530 1.125093 ACATCACCGTCCCAAGTGGA 61.125 55.000 0.00 0.00 42.41 4.02
6602 13531 0.955428 CACATCACCGTCCCAAGTGG 60.955 60.000 0.00 0.00 34.67 4.00
6603 13532 0.250295 ACACATCACCGTCCCAAGTG 60.250 55.000 0.00 0.00 35.24 3.16
6604 13533 0.472471 AACACATCACCGTCCCAAGT 59.528 50.000 0.00 0.00 0.00 3.16
6605 13534 1.156736 GAACACATCACCGTCCCAAG 58.843 55.000 0.00 0.00 0.00 3.61
6606 13535 0.601576 CGAACACATCACCGTCCCAA 60.602 55.000 0.00 0.00 0.00 4.12
6607 13536 1.005512 CGAACACATCACCGTCCCA 60.006 57.895 0.00 0.00 0.00 4.37
6608 13537 1.740296 CCGAACACATCACCGTCCC 60.740 63.158 0.00 0.00 0.00 4.46
6609 13538 2.388232 GCCGAACACATCACCGTCC 61.388 63.158 0.00 0.00 0.00 4.79
6610 13539 2.388232 GGCCGAACACATCACCGTC 61.388 63.158 0.00 0.00 0.00 4.79
6611 13540 2.358247 GGCCGAACACATCACCGT 60.358 61.111 0.00 0.00 0.00 4.83
6612 13541 1.745115 ATGGCCGAACACATCACCG 60.745 57.895 0.00 0.00 0.00 4.94
6613 13542 0.960364 ACATGGCCGAACACATCACC 60.960 55.000 0.00 0.00 0.00 4.02
6614 13543 0.447801 GACATGGCCGAACACATCAC 59.552 55.000 0.00 0.00 0.00 3.06
6615 13544 0.676466 GGACATGGCCGAACACATCA 60.676 55.000 0.00 0.00 0.00 3.07
6616 13545 2.098293 GGACATGGCCGAACACATC 58.902 57.895 0.00 0.00 0.00 3.06
6617 13546 4.319133 GGACATGGCCGAACACAT 57.681 55.556 0.00 0.00 0.00 3.21
6625 13554 3.322706 GACAAACGCGGACATGGCC 62.323 63.158 7.86 7.86 0.00 5.36
6626 13555 2.175811 GACAAACGCGGACATGGC 59.824 61.111 12.47 1.31 0.00 4.40
6627 13556 2.867472 GGACAAACGCGGACATGG 59.133 61.111 12.47 0.00 0.00 3.66
6628 13557 1.837538 AACGGACAAACGCGGACATG 61.838 55.000 12.47 6.09 37.37 3.21
6629 13558 1.595929 AACGGACAAACGCGGACAT 60.596 52.632 12.47 0.00 37.37 3.06
6630 13559 2.202905 AACGGACAAACGCGGACA 60.203 55.556 12.47 0.00 37.37 4.02
6631 13560 2.247267 CAACGGACAAACGCGGAC 59.753 61.111 12.47 0.00 37.37 4.79
6632 13561 2.968156 CCAACGGACAAACGCGGA 60.968 61.111 12.47 0.00 37.37 5.54
6633 13562 4.020378 CCCAACGGACAAACGCGG 62.020 66.667 12.47 0.00 37.37 6.46
6634 13563 2.825975 AACCCAACGGACAAACGCG 61.826 57.895 3.53 3.53 37.37 6.01
6635 13564 1.298788 CAACCCAACGGACAAACGC 60.299 57.895 0.00 0.00 37.37 4.84
6636 13565 0.248296 CACAACCCAACGGACAAACG 60.248 55.000 0.00 0.00 40.31 3.60
6637 13566 0.101579 CCACAACCCAACGGACAAAC 59.898 55.000 0.00 0.00 0.00 2.93
6638 13567 1.038130 CCCACAACCCAACGGACAAA 61.038 55.000 0.00 0.00 0.00 2.83
6639 13568 1.454111 CCCACAACCCAACGGACAA 60.454 57.895 0.00 0.00 0.00 3.18
6640 13569 2.193517 CCCACAACCCAACGGACA 59.806 61.111 0.00 0.00 0.00 4.02
6641 13570 2.190841 CACCCACAACCCAACGGAC 61.191 63.158 0.00 0.00 0.00 4.79
6642 13571 2.193517 CACCCACAACCCAACGGA 59.806 61.111 0.00 0.00 0.00 4.69
6643 13572 2.124067 ACACCCACAACCCAACGG 60.124 61.111 0.00 0.00 0.00 4.44
6644 13573 3.115556 CACACCCACAACCCAACG 58.884 61.111 0.00 0.00 0.00 4.10
6645 13574 2.791868 GGCACACCCACAACCCAAC 61.792 63.158 0.00 0.00 0.00 3.77
6646 13575 2.443016 GGCACACCCACAACCCAA 60.443 61.111 0.00 0.00 0.00 4.12
6663 13592 3.945434 GATGCGGATGTGCGCTGG 61.945 66.667 19.08 0.00 37.81 4.85
6664 13593 2.879070 GAGATGCGGATGTGCGCTG 61.879 63.158 19.08 0.00 37.81 5.18
6665 13594 2.587194 GAGATGCGGATGTGCGCT 60.587 61.111 19.08 5.62 37.81 5.92
6666 13595 1.980951 TTTGAGATGCGGATGTGCGC 61.981 55.000 12.05 12.05 37.81 6.09
6667 13596 0.659427 ATTTGAGATGCGGATGTGCG 59.341 50.000 0.00 0.00 37.81 5.34
6668 13597 1.672363 TGATTTGAGATGCGGATGTGC 59.328 47.619 0.00 0.00 0.00 4.57
6669 13598 3.314357 ACATGATTTGAGATGCGGATGTG 59.686 43.478 0.00 0.00 0.00 3.21
6670 13599 3.548770 ACATGATTTGAGATGCGGATGT 58.451 40.909 0.00 0.00 0.00 3.06
6671 13600 3.058432 GGACATGATTTGAGATGCGGATG 60.058 47.826 0.00 0.00 0.00 3.51
6672 13601 3.144506 GGACATGATTTGAGATGCGGAT 58.855 45.455 0.00 0.00 0.00 4.18
6673 13602 2.564771 GGACATGATTTGAGATGCGGA 58.435 47.619 0.00 0.00 0.00 5.54
6674 13603 1.262417 CGGACATGATTTGAGATGCGG 59.738 52.381 0.00 0.00 0.00 5.69
6675 13604 1.262417 CCGGACATGATTTGAGATGCG 59.738 52.381 0.00 0.00 0.00 4.73
6676 13605 1.605710 CCCGGACATGATTTGAGATGC 59.394 52.381 0.73 0.00 0.00 3.91
6677 13606 2.224606 CCCCGGACATGATTTGAGATG 58.775 52.381 0.73 0.00 0.00 2.90
6678 13607 1.846439 ACCCCGGACATGATTTGAGAT 59.154 47.619 0.73 0.00 0.00 2.75
6679 13608 1.065491 CACCCCGGACATGATTTGAGA 60.065 52.381 0.73 0.00 0.00 3.27
6680 13609 1.382522 CACCCCGGACATGATTTGAG 58.617 55.000 0.73 0.00 0.00 3.02
6681 13610 0.679640 GCACCCCGGACATGATTTGA 60.680 55.000 0.73 0.00 0.00 2.69
6682 13611 0.964860 TGCACCCCGGACATGATTTG 60.965 55.000 0.73 0.00 0.00 2.32
6683 13612 0.965363 GTGCACCCCGGACATGATTT 60.965 55.000 5.22 0.00 35.67 2.17
6684 13613 1.378514 GTGCACCCCGGACATGATT 60.379 57.895 5.22 0.00 35.67 2.57
6685 13614 2.272146 GTGCACCCCGGACATGAT 59.728 61.111 5.22 0.00 35.67 2.45
6686 13615 4.386951 CGTGCACCCCGGACATGA 62.387 66.667 12.15 0.00 35.22 3.07
6687 13616 4.697756 ACGTGCACCCCGGACATG 62.698 66.667 12.15 3.58 35.22 3.21
6688 13617 4.697756 CACGTGCACCCCGGACAT 62.698 66.667 12.15 0.00 35.22 3.06
6690 13619 2.510064 TAATCACGTGCACCCCGGAC 62.510 60.000 11.67 0.00 0.00 4.79
6691 13620 1.828461 TTAATCACGTGCACCCCGGA 61.828 55.000 11.67 4.04 0.00 5.14
6692 13621 0.956410 TTTAATCACGTGCACCCCGG 60.956 55.000 11.67 0.00 0.00 5.73
6693 13622 0.875728 TTTTAATCACGTGCACCCCG 59.124 50.000 11.67 1.82 0.00 5.73
6730 13659 8.714179 GCGTTAATTTACCTTTTTAGGCATTTT 58.286 29.630 0.00 0.00 0.00 1.82
6731 13660 7.873505 TGCGTTAATTTACCTTTTTAGGCATTT 59.126 29.630 0.00 0.00 0.00 2.32
6732 13661 7.329962 GTGCGTTAATTTACCTTTTTAGGCATT 59.670 33.333 0.00 0.00 0.00 3.56
6733 13662 6.809689 GTGCGTTAATTTACCTTTTTAGGCAT 59.190 34.615 0.00 0.00 0.00 4.40
6734 13663 6.016108 AGTGCGTTAATTTACCTTTTTAGGCA 60.016 34.615 0.00 0.00 0.00 4.75
6735 13664 6.384224 AGTGCGTTAATTTACCTTTTTAGGC 58.616 36.000 0.00 0.00 0.00 3.93
6736 13665 9.896263 TTAAGTGCGTTAATTTACCTTTTTAGG 57.104 29.630 0.00 0.00 0.00 2.69
6767 13696 8.833493 GCCGTGACCTTTATATATGTTTTAAGT 58.167 33.333 0.00 0.00 0.00 2.24
6768 13697 8.287503 GGCCGTGACCTTTATATATGTTTTAAG 58.712 37.037 0.00 0.00 0.00 1.85
6769 13698 7.774157 TGGCCGTGACCTTTATATATGTTTTAA 59.226 33.333 0.00 0.00 0.00 1.52
6770 13699 7.227116 GTGGCCGTGACCTTTATATATGTTTTA 59.773 37.037 0.00 0.00 0.00 1.52
6771 13700 6.038936 GTGGCCGTGACCTTTATATATGTTTT 59.961 38.462 0.00 0.00 0.00 2.43
6772 13701 5.529800 GTGGCCGTGACCTTTATATATGTTT 59.470 40.000 0.00 0.00 0.00 2.83
6773 13702 5.061179 GTGGCCGTGACCTTTATATATGTT 58.939 41.667 0.00 0.00 0.00 2.71
6774 13703 4.101898 TGTGGCCGTGACCTTTATATATGT 59.898 41.667 0.00 0.00 0.00 2.29
6775 13704 4.637276 TGTGGCCGTGACCTTTATATATG 58.363 43.478 0.00 0.00 0.00 1.78
6776 13705 4.967084 TGTGGCCGTGACCTTTATATAT 57.033 40.909 0.00 0.00 0.00 0.86
6777 13706 4.757019 TTGTGGCCGTGACCTTTATATA 57.243 40.909 0.00 0.00 0.00 0.86
6778 13707 3.637911 TTGTGGCCGTGACCTTTATAT 57.362 42.857 0.00 0.00 0.00 0.86
6779 13708 3.420300 TTTGTGGCCGTGACCTTTATA 57.580 42.857 0.00 0.00 0.00 0.98
6780 13709 2.279935 TTTGTGGCCGTGACCTTTAT 57.720 45.000 0.00 0.00 0.00 1.40
6781 13710 1.677052 GTTTTGTGGCCGTGACCTTTA 59.323 47.619 0.00 0.00 0.00 1.85
6782 13711 0.458260 GTTTTGTGGCCGTGACCTTT 59.542 50.000 0.00 0.00 0.00 3.11
6783 13712 1.720694 CGTTTTGTGGCCGTGACCTT 61.721 55.000 0.00 0.00 0.00 3.50
6784 13713 2.184167 CGTTTTGTGGCCGTGACCT 61.184 57.895 0.00 0.00 0.00 3.85
6785 13714 2.330041 CGTTTTGTGGCCGTGACC 59.670 61.111 0.00 0.00 0.00 4.02
6786 13715 2.330041 CCGTTTTGTGGCCGTGAC 59.670 61.111 0.00 0.00 0.00 3.67
6787 13716 2.124653 ACCGTTTTGTGGCCGTGA 60.125 55.556 0.00 0.00 0.00 4.35
6788 13717 2.330041 GACCGTTTTGTGGCCGTG 59.670 61.111 0.00 0.00 0.00 4.94
6789 13718 2.903350 GGACCGTTTTGTGGCCGT 60.903 61.111 0.00 0.00 0.00 5.68
6790 13719 2.902846 TGGACCGTTTTGTGGCCG 60.903 61.111 0.00 0.00 0.00 6.13
6791 13720 1.388837 AACTGGACCGTTTTGTGGCC 61.389 55.000 0.00 0.00 0.00 5.36
6792 13721 0.458260 AAACTGGACCGTTTTGTGGC 59.542 50.000 8.15 0.00 33.57 5.01
6793 13722 4.295051 CATTAAACTGGACCGTTTTGTGG 58.705 43.478 16.08 4.88 38.08 4.17
6794 13723 3.733727 GCATTAAACTGGACCGTTTTGTG 59.266 43.478 16.08 15.15 38.08 3.33
6795 13724 3.243602 GGCATTAAACTGGACCGTTTTGT 60.244 43.478 16.08 6.44 38.08 2.83
6796 13725 3.313690 GGCATTAAACTGGACCGTTTTG 58.686 45.455 16.08 11.81 38.08 2.44
6797 13726 2.030628 CGGCATTAAACTGGACCGTTTT 60.031 45.455 16.08 7.37 38.08 2.43
6798 13727 1.538075 CGGCATTAAACTGGACCGTTT 59.462 47.619 15.46 15.46 40.06 3.60
6799 13728 1.161843 CGGCATTAAACTGGACCGTT 58.838 50.000 0.00 0.00 35.99 4.44
6800 13729 1.303091 GCGGCATTAAACTGGACCGT 61.303 55.000 0.00 0.00 42.51 4.83
6801 13730 1.302383 TGCGGCATTAAACTGGACCG 61.302 55.000 0.00 0.00 43.37 4.79
6802 13731 0.170339 GTGCGGCATTAAACTGGACC 59.830 55.000 5.72 0.00 0.00 4.46
6803 13732 1.165270 AGTGCGGCATTAAACTGGAC 58.835 50.000 5.72 4.70 35.18 4.02
6804 13733 1.904287 AAGTGCGGCATTAAACTGGA 58.096 45.000 5.72 0.00 0.00 3.86
6805 13734 3.840890 TTAAGTGCGGCATTAAACTGG 57.159 42.857 5.72 0.00 0.00 4.00
6806 13735 3.602062 CGTTTAAGTGCGGCATTAAACTG 59.398 43.478 30.54 25.27 44.24 3.16
6807 13736 3.365565 CCGTTTAAGTGCGGCATTAAACT 60.366 43.478 30.54 16.42 44.24 2.66
6808 13737 2.912345 CCGTTTAAGTGCGGCATTAAAC 59.088 45.455 27.90 27.90 43.54 2.01
6809 13738 3.204597 CCGTTTAAGTGCGGCATTAAA 57.795 42.857 5.72 14.33 41.53 1.52
6810 13739 2.904011 CCGTTTAAGTGCGGCATTAA 57.096 45.000 5.72 9.36 41.53 1.40
6817 13746 0.306533 AACTGTGCCGTTTAAGTGCG 59.693 50.000 0.00 0.00 0.00 5.34
6818 13747 1.334689 GGAACTGTGCCGTTTAAGTGC 60.335 52.381 0.00 0.00 0.00 4.40
6819 13748 1.944024 TGGAACTGTGCCGTTTAAGTG 59.056 47.619 0.00 0.00 0.00 3.16
6820 13749 2.335316 TGGAACTGTGCCGTTTAAGT 57.665 45.000 0.00 0.00 0.00 2.24
6821 13750 5.560966 ATTATGGAACTGTGCCGTTTAAG 57.439 39.130 4.50 0.00 0.00 1.85
6822 13751 5.968528 AATTATGGAACTGTGCCGTTTAA 57.031 34.783 4.50 1.28 0.00 1.52
6823 13752 6.430308 TGTTAATTATGGAACTGTGCCGTTTA 59.570 34.615 4.50 0.00 0.00 2.01
6824 13753 5.241949 TGTTAATTATGGAACTGTGCCGTTT 59.758 36.000 4.50 0.00 0.00 3.60
6825 13754 4.762765 TGTTAATTATGGAACTGTGCCGTT 59.237 37.500 4.50 0.00 0.00 4.44
6826 13755 4.328536 TGTTAATTATGGAACTGTGCCGT 58.671 39.130 4.61 4.61 0.00 5.68
6827 13756 4.955925 TGTTAATTATGGAACTGTGCCG 57.044 40.909 0.00 0.00 0.00 5.69
6828 13757 9.646427 TTTTTATGTTAATTATGGAACTGTGCC 57.354 29.630 0.00 0.00 0.00 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.