Multiple sequence alignment - TraesCS2A01G413300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G413300 chr2A 100.000 2696 0 0 1 2696 670643179 670640484 0 4979
1 TraesCS2A01G413300 chr2D 92.701 2329 92 28 223 2531 526162301 526164571 0 3288
2 TraesCS2A01G413300 chr2B 91.628 2353 94 37 223 2528 621181991 621179695 0 3158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G413300 chr2A 670640484 670643179 2695 True 4979 4979 100.000 1 2696 1 chr2A.!!$R1 2695
1 TraesCS2A01G413300 chr2D 526162301 526164571 2270 False 3288 3288 92.701 223 2531 1 chr2D.!!$F1 2308
2 TraesCS2A01G413300 chr2B 621179695 621181991 2296 True 3158 3158 91.628 223 2528 1 chr2B.!!$R1 2305

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
33 34 0.30776 CTTGACCAGAACCACGTTGC 59.692 55.0 0.0 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1959 1985 0.035915 TGTGCCCGCATAAGTAAGCA 60.036 50.0 0.0 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.839051 GTTGGAATGCTTCTCTTGACC 57.161 47.619 0.00 0.00 0.00 4.02
21 22 3.149196 GTTGGAATGCTTCTCTTGACCA 58.851 45.455 0.00 0.00 0.00 4.02
22 23 3.063510 TGGAATGCTTCTCTTGACCAG 57.936 47.619 0.00 0.00 0.00 4.00
23 24 2.639347 TGGAATGCTTCTCTTGACCAGA 59.361 45.455 0.00 0.00 0.00 3.86
24 25 3.072915 TGGAATGCTTCTCTTGACCAGAA 59.927 43.478 0.00 0.00 0.00 3.02
25 26 3.438434 GGAATGCTTCTCTTGACCAGAAC 59.562 47.826 0.00 0.00 0.00 3.01
26 27 2.550830 TGCTTCTCTTGACCAGAACC 57.449 50.000 0.00 0.00 0.00 3.62
27 28 1.768275 TGCTTCTCTTGACCAGAACCA 59.232 47.619 0.00 0.00 0.00 3.67
28 29 2.147150 GCTTCTCTTGACCAGAACCAC 58.853 52.381 0.00 0.00 0.00 4.16
29 30 2.408050 CTTCTCTTGACCAGAACCACG 58.592 52.381 0.00 0.00 0.00 4.94
30 31 1.410004 TCTCTTGACCAGAACCACGT 58.590 50.000 0.00 0.00 0.00 4.49
31 32 1.760613 TCTCTTGACCAGAACCACGTT 59.239 47.619 0.00 0.00 0.00 3.99
32 33 1.867233 CTCTTGACCAGAACCACGTTG 59.133 52.381 0.00 0.00 0.00 4.10
33 34 0.307760 CTTGACCAGAACCACGTTGC 59.692 55.000 0.00 0.00 0.00 4.17
34 35 1.433053 TTGACCAGAACCACGTTGCG 61.433 55.000 0.00 0.00 0.00 4.85
35 36 1.593209 GACCAGAACCACGTTGCGA 60.593 57.895 0.00 0.00 0.00 5.10
36 37 1.153329 ACCAGAACCACGTTGCGAA 60.153 52.632 0.00 0.00 0.00 4.70
37 38 1.157870 ACCAGAACCACGTTGCGAAG 61.158 55.000 0.00 0.00 0.00 3.79
38 39 0.878523 CCAGAACCACGTTGCGAAGA 60.879 55.000 0.00 0.00 0.00 2.87
39 40 1.148310 CAGAACCACGTTGCGAAGAT 58.852 50.000 0.00 0.00 0.00 2.40
40 41 1.531149 CAGAACCACGTTGCGAAGATT 59.469 47.619 0.00 0.00 0.00 2.40
41 42 1.798813 AGAACCACGTTGCGAAGATTC 59.201 47.619 0.00 0.00 0.00 2.52
42 43 1.798813 GAACCACGTTGCGAAGATTCT 59.201 47.619 0.00 0.00 0.00 2.40
43 44 1.878953 ACCACGTTGCGAAGATTCTT 58.121 45.000 0.00 0.00 0.00 2.52
44 45 3.034721 ACCACGTTGCGAAGATTCTTA 57.965 42.857 0.00 0.00 0.00 2.10
45 46 3.395639 ACCACGTTGCGAAGATTCTTAA 58.604 40.909 0.00 0.00 0.00 1.85
46 47 4.000988 ACCACGTTGCGAAGATTCTTAAT 58.999 39.130 0.00 0.00 0.00 1.40
47 48 4.454504 ACCACGTTGCGAAGATTCTTAATT 59.545 37.500 0.00 0.00 0.00 1.40
48 49 5.048991 ACCACGTTGCGAAGATTCTTAATTT 60.049 36.000 0.00 0.00 0.00 1.82
49 50 5.856455 CCACGTTGCGAAGATTCTTAATTTT 59.144 36.000 0.00 0.00 0.00 1.82
50 51 6.032460 CCACGTTGCGAAGATTCTTAATTTTC 59.968 38.462 0.00 0.00 0.00 2.29
51 52 6.797033 CACGTTGCGAAGATTCTTAATTTTCT 59.203 34.615 0.00 0.00 31.72 2.52
52 53 7.323656 CACGTTGCGAAGATTCTTAATTTTCTT 59.676 33.333 0.00 0.00 31.72 2.52
53 54 7.534239 ACGTTGCGAAGATTCTTAATTTTCTTC 59.466 33.333 0.00 9.64 40.30 2.87
54 55 7.533900 CGTTGCGAAGATTCTTAATTTTCTTCA 59.466 33.333 15.78 2.70 42.61 3.02
55 56 9.180678 GTTGCGAAGATTCTTAATTTTCTTCAA 57.819 29.630 15.78 6.75 42.61 2.69
56 57 9.743057 TTGCGAAGATTCTTAATTTTCTTCAAA 57.257 25.926 15.78 9.88 42.61 2.69
57 58 9.912634 TGCGAAGATTCTTAATTTTCTTCAAAT 57.087 25.926 15.78 0.00 42.61 2.32
124 125 9.630098 ATTTCTTATACTGTTGTGAATTGCTTG 57.370 29.630 0.00 0.00 0.00 4.01
125 126 7.744087 TCTTATACTGTTGTGAATTGCTTGT 57.256 32.000 0.00 0.00 0.00 3.16
126 127 7.806690 TCTTATACTGTTGTGAATTGCTTGTC 58.193 34.615 0.00 0.00 0.00 3.18
127 128 3.715628 ACTGTTGTGAATTGCTTGTCC 57.284 42.857 0.00 0.00 0.00 4.02
128 129 2.033299 ACTGTTGTGAATTGCTTGTCCG 59.967 45.455 0.00 0.00 0.00 4.79
129 130 1.268999 TGTTGTGAATTGCTTGTCCGC 60.269 47.619 0.00 0.00 0.00 5.54
130 131 1.028130 TTGTGAATTGCTTGTCCGCA 58.972 45.000 0.00 0.00 38.31 5.69
169 170 8.429237 AAAAGAAGAGAGAGAACCTGAATAGA 57.571 34.615 0.00 0.00 0.00 1.98
170 171 7.645058 AAGAAGAGAGAGAACCTGAATAGAG 57.355 40.000 0.00 0.00 0.00 2.43
171 172 5.594317 AGAAGAGAGAGAACCTGAATAGAGC 59.406 44.000 0.00 0.00 0.00 4.09
172 173 3.882888 AGAGAGAGAACCTGAATAGAGCG 59.117 47.826 0.00 0.00 0.00 5.03
173 174 3.880490 GAGAGAGAACCTGAATAGAGCGA 59.120 47.826 0.00 0.00 0.00 4.93
174 175 4.274147 AGAGAGAACCTGAATAGAGCGAA 58.726 43.478 0.00 0.00 0.00 4.70
175 176 4.338118 AGAGAGAACCTGAATAGAGCGAAG 59.662 45.833 0.00 0.00 0.00 3.79
176 177 4.274147 AGAGAACCTGAATAGAGCGAAGA 58.726 43.478 0.00 0.00 0.00 2.87
177 178 4.097286 AGAGAACCTGAATAGAGCGAAGAC 59.903 45.833 0.00 0.00 0.00 3.01
178 179 3.131400 AGAACCTGAATAGAGCGAAGACC 59.869 47.826 0.00 0.00 0.00 3.85
179 180 1.405821 ACCTGAATAGAGCGAAGACCG 59.594 52.381 0.00 0.00 42.21 4.79
180 181 1.676529 CCTGAATAGAGCGAAGACCGA 59.323 52.381 0.00 0.00 41.76 4.69
181 182 2.099263 CCTGAATAGAGCGAAGACCGAA 59.901 50.000 0.00 0.00 41.76 4.30
182 183 3.428999 CCTGAATAGAGCGAAGACCGAAA 60.429 47.826 0.00 0.00 41.76 3.46
183 184 4.174009 CTGAATAGAGCGAAGACCGAAAA 58.826 43.478 0.00 0.00 41.76 2.29
184 185 4.562082 TGAATAGAGCGAAGACCGAAAAA 58.438 39.130 0.00 0.00 41.76 1.94
203 204 4.813296 AAAAATCGAGATACCCGAATGC 57.187 40.909 0.00 0.00 39.62 3.56
204 205 2.457366 AATCGAGATACCCGAATGCC 57.543 50.000 0.00 0.00 39.62 4.40
205 206 0.608640 ATCGAGATACCCGAATGCCC 59.391 55.000 0.00 0.00 39.62 5.36
206 207 0.757561 TCGAGATACCCGAATGCCCA 60.758 55.000 0.00 0.00 32.64 5.36
207 208 0.600255 CGAGATACCCGAATGCCCAC 60.600 60.000 0.00 0.00 0.00 4.61
208 209 0.759346 GAGATACCCGAATGCCCACT 59.241 55.000 0.00 0.00 0.00 4.00
209 210 0.759346 AGATACCCGAATGCCCACTC 59.241 55.000 0.00 0.00 0.00 3.51
210 211 0.759346 GATACCCGAATGCCCACTCT 59.241 55.000 0.00 0.00 0.00 3.24
211 212 0.469917 ATACCCGAATGCCCACTCTG 59.530 55.000 0.00 0.00 0.00 3.35
212 213 0.616395 TACCCGAATGCCCACTCTGA 60.616 55.000 0.00 0.00 0.00 3.27
213 214 1.299648 CCCGAATGCCCACTCTGAA 59.700 57.895 0.00 0.00 0.00 3.02
214 215 0.322456 CCCGAATGCCCACTCTGAAA 60.322 55.000 0.00 0.00 0.00 2.69
215 216 1.533625 CCGAATGCCCACTCTGAAAA 58.466 50.000 0.00 0.00 0.00 2.29
216 217 1.470098 CCGAATGCCCACTCTGAAAAG 59.530 52.381 0.00 0.00 0.00 2.27
217 218 2.154462 CGAATGCCCACTCTGAAAAGT 58.846 47.619 0.00 0.00 0.00 2.66
218 219 2.554032 CGAATGCCCACTCTGAAAAGTT 59.446 45.455 0.00 0.00 0.00 2.66
219 220 3.751175 CGAATGCCCACTCTGAAAAGTTA 59.249 43.478 0.00 0.00 0.00 2.24
220 221 4.378459 CGAATGCCCACTCTGAAAAGTTAC 60.378 45.833 0.00 0.00 0.00 2.50
221 222 2.489971 TGCCCACTCTGAAAAGTTACG 58.510 47.619 0.00 0.00 0.00 3.18
432 434 0.870393 TTCTCTCGCAAGCAAGCAAG 59.130 50.000 1.32 0.00 37.18 4.01
434 436 1.848932 CTCTCGCAAGCAAGCAAGCA 61.849 55.000 8.92 0.00 36.85 3.91
435 437 1.008194 CTCGCAAGCAAGCAAGCAA 60.008 52.632 8.92 0.00 36.85 3.91
519 521 3.245315 GGTAGCAGCACGTACGCG 61.245 66.667 16.72 3.53 44.93 6.01
713 715 3.173965 CTCAGACCCTCTAAACCAAGGA 58.826 50.000 0.00 0.00 34.35 3.36
754 770 1.446272 CCTCTCCGTCGTCCTTTGC 60.446 63.158 0.00 0.00 0.00 3.68
777 793 2.170985 CTGTTACGTGCACGCTGC 59.829 61.111 37.35 25.90 45.29 5.25
796 812 1.591248 CGATTATGTTAATGCCGCGC 58.409 50.000 0.00 0.00 0.00 6.86
844 860 1.472480 CCAACCTCCATTGTTTAGCCG 59.528 52.381 0.00 0.00 0.00 5.52
953 969 2.732094 CAGCCAAGCTTTGCGTGC 60.732 61.111 16.08 5.39 36.40 5.34
980 996 4.778415 CCTCGTGAGCCGTGACCG 62.778 72.222 0.00 0.00 37.94 4.79
994 1010 2.003301 GTGACCGCCAGAGAATTCTTC 58.997 52.381 9.87 1.76 0.00 2.87
995 1011 1.066143 TGACCGCCAGAGAATTCTTCC 60.066 52.381 9.87 0.00 0.00 3.46
1030 1046 2.124236 AGCTAGGGTCGGAGTCGG 60.124 66.667 0.00 0.00 36.95 4.79
1031 1047 2.124403 GCTAGGGTCGGAGTCGGA 60.124 66.667 0.00 0.00 36.95 4.55
1033 1049 2.124983 TAGGGTCGGAGTCGGACG 60.125 66.667 20.68 3.13 36.95 4.79
1034 1050 3.687321 TAGGGTCGGAGTCGGACGG 62.687 68.421 20.68 0.00 36.95 4.79
1037 1053 2.436646 GTCGGAGTCGGACGGGTA 60.437 66.667 14.25 0.00 36.95 3.69
1038 1054 1.821332 GTCGGAGTCGGACGGGTAT 60.821 63.158 14.25 0.00 36.95 2.73
1522 1547 0.462759 CCTCTTCCTGATGCGGTTCC 60.463 60.000 0.00 0.00 0.00 3.62
1580 1605 3.791586 GCACCTGGAGAGGGAGGC 61.792 72.222 0.00 0.00 44.84 4.70
1617 1642 2.286523 CCAGGTCGAGAGGTGCCTT 61.287 63.158 0.00 0.00 0.00 4.35
1700 1725 0.955919 GCGGCAGCTCAGTAAAAGGT 60.956 55.000 0.00 0.00 41.01 3.50
1713 1738 0.250770 AAAAGGTCCTCGCCAACCTC 60.251 55.000 0.00 0.00 45.21 3.85
1739 1764 3.129988 GCACTAAAGACTAAGGTAGCCGA 59.870 47.826 0.00 0.00 0.00 5.54
1740 1765 4.202131 GCACTAAAGACTAAGGTAGCCGAT 60.202 45.833 0.00 0.00 0.00 4.18
1804 1829 0.985549 GTGTCGTGACAAGATCGAGC 59.014 55.000 3.92 0.00 43.77 5.03
1850 1875 4.980434 GGCTGTACCTGTACGTACATAATG 59.020 45.833 27.50 15.99 45.63 1.90
1851 1876 4.980434 GCTGTACCTGTACGTACATAATGG 59.020 45.833 27.50 25.02 45.63 3.16
1852 1877 5.450965 GCTGTACCTGTACGTACATAATGGT 60.451 44.000 29.31 29.31 45.63 3.55
1853 1878 6.238731 GCTGTACCTGTACGTACATAATGGTA 60.239 42.308 27.75 27.75 45.63 3.25
1939 1964 3.253677 ACCGATGCGAGGATTAGTAAGAG 59.746 47.826 0.00 0.00 0.00 2.85
2015 2041 6.381801 TGCTTTTTAGCAGCTAAACAGAATC 58.618 36.000 32.06 20.27 36.44 2.52
2023 2049 2.093447 AGCTAAACAGAATCGACAGGGG 60.093 50.000 0.00 0.00 0.00 4.79
2064 2090 9.503427 GAGAATTGTAACAAAATATCTTTCCCG 57.497 33.333 0.00 0.00 0.00 5.14
2065 2091 9.020731 AGAATTGTAACAAAATATCTTTCCCGT 57.979 29.630 0.00 0.00 0.00 5.28
2066 2092 9.285770 GAATTGTAACAAAATATCTTTCCCGTC 57.714 33.333 0.00 0.00 0.00 4.79
2067 2093 7.747155 TTGTAACAAAATATCTTTCCCGTCA 57.253 32.000 0.00 0.00 0.00 4.35
2068 2094 7.747155 TGTAACAAAATATCTTTCCCGTCAA 57.253 32.000 0.00 0.00 0.00 3.18
2069 2095 8.167605 TGTAACAAAATATCTTTCCCGTCAAA 57.832 30.769 0.00 0.00 0.00 2.69
2070 2096 8.630917 TGTAACAAAATATCTTTCCCGTCAAAA 58.369 29.630 0.00 0.00 0.00 2.44
2071 2097 9.465985 GTAACAAAATATCTTTCCCGTCAAAAA 57.534 29.630 0.00 0.00 0.00 1.94
2182 2210 8.739039 CAACAAATGATTCCATACCACTTTCTA 58.261 33.333 0.00 0.00 31.59 2.10
2187 2215 8.697507 ATGATTCCATACCACTTTCTAAATCC 57.302 34.615 0.00 0.00 0.00 3.01
2213 2244 6.818644 ACAAATGATTAGAACGTATCAGTGCT 59.181 34.615 5.11 0.00 34.52 4.40
2264 2295 5.356882 TTCTCTTCGAAAATGTGCGATTT 57.643 34.783 0.00 0.00 36.31 2.17
2490 2542 0.107165 GGCCTGTAACCTGGTCCATC 60.107 60.000 0.00 0.00 32.49 3.51
2500 2552 3.211963 GGTCCATCCCATGCGCAC 61.212 66.667 14.90 0.00 0.00 5.34
2514 2566 4.254672 GCACTTGCGCACACAGCA 62.255 61.111 11.12 0.00 46.13 4.41
2515 2567 2.051614 CACTTGCGCACACAGCAG 60.052 61.111 11.12 6.22 46.01 4.24
2516 2568 3.957535 ACTTGCGCACACAGCAGC 61.958 61.111 11.12 0.00 46.01 5.25
2534 2586 2.935481 GCATTCCAAAAGGCTCAGAG 57.065 50.000 0.00 0.00 39.07 3.35
2535 2587 2.165998 GCATTCCAAAAGGCTCAGAGT 58.834 47.619 0.00 0.00 39.07 3.24
2536 2588 3.347216 GCATTCCAAAAGGCTCAGAGTA 58.653 45.455 0.00 0.00 39.07 2.59
2537 2589 3.950395 GCATTCCAAAAGGCTCAGAGTAT 59.050 43.478 0.00 0.00 39.07 2.12
2538 2590 4.036144 GCATTCCAAAAGGCTCAGAGTATC 59.964 45.833 0.00 0.00 39.07 2.24
2539 2591 6.149575 GCATTCCAAAAGGCTCAGAGTATCT 61.150 44.000 0.00 0.00 42.37 1.98
2540 2592 7.578060 GCATTCCAAAAGGCTCAGAGTATCTT 61.578 42.308 0.00 0.00 40.10 2.40
2541 2593 9.274096 GCATTCCAAAAGGCTCAGAGTATCTTC 62.274 44.444 0.00 0.00 40.10 2.87
2551 2603 2.301577 GAGTATCTTCAACGGCTGCT 57.698 50.000 0.00 0.00 0.00 4.24
2552 2604 2.622436 GAGTATCTTCAACGGCTGCTT 58.378 47.619 0.00 0.00 0.00 3.91
2553 2605 2.349886 GAGTATCTTCAACGGCTGCTTG 59.650 50.000 0.00 0.00 0.00 4.01
2554 2606 1.086696 TATCTTCAACGGCTGCTTGC 58.913 50.000 0.00 0.00 41.94 4.01
2555 2607 0.890542 ATCTTCAACGGCTGCTTGCA 60.891 50.000 0.00 0.00 45.15 4.08
2556 2608 1.100463 TCTTCAACGGCTGCTTGCAA 61.100 50.000 0.00 0.00 45.15 4.08
2557 2609 0.248990 CTTCAACGGCTGCTTGCAAA 60.249 50.000 0.00 0.00 45.15 3.68
2558 2610 0.388659 TTCAACGGCTGCTTGCAAAT 59.611 45.000 0.00 0.00 45.15 2.32
2559 2611 0.388659 TCAACGGCTGCTTGCAAATT 59.611 45.000 0.00 0.00 45.15 1.82
2560 2612 1.202510 TCAACGGCTGCTTGCAAATTT 60.203 42.857 0.00 0.00 45.15 1.82
2561 2613 1.192980 CAACGGCTGCTTGCAAATTTC 59.807 47.619 0.00 0.00 45.15 2.17
2562 2614 0.319813 ACGGCTGCTTGCAAATTTCC 60.320 50.000 0.00 0.00 45.15 3.13
2563 2615 0.037975 CGGCTGCTTGCAAATTTCCT 60.038 50.000 0.00 0.00 45.15 3.36
2564 2616 1.718396 GGCTGCTTGCAAATTTCCTC 58.282 50.000 0.00 0.00 45.15 3.71
2565 2617 1.343506 GCTGCTTGCAAATTTCCTCG 58.656 50.000 0.00 0.00 42.31 4.63
2566 2618 1.986698 CTGCTTGCAAATTTCCTCGG 58.013 50.000 0.00 0.00 0.00 4.63
2567 2619 1.270550 CTGCTTGCAAATTTCCTCGGT 59.729 47.619 0.00 0.00 0.00 4.69
2568 2620 1.269448 TGCTTGCAAATTTCCTCGGTC 59.731 47.619 0.00 0.00 0.00 4.79
2569 2621 1.402852 GCTTGCAAATTTCCTCGGTCC 60.403 52.381 0.00 0.00 0.00 4.46
2570 2622 0.878416 TTGCAAATTTCCTCGGTCCG 59.122 50.000 4.39 4.39 0.00 4.79
2571 2623 1.136774 GCAAATTTCCTCGGTCCGC 59.863 57.895 6.34 0.00 0.00 5.54
2572 2624 1.582610 GCAAATTTCCTCGGTCCGCA 61.583 55.000 6.34 0.00 0.00 5.69
2573 2625 0.878416 CAAATTTCCTCGGTCCGCAA 59.122 50.000 6.34 0.00 0.00 4.85
2574 2626 1.135689 CAAATTTCCTCGGTCCGCAAG 60.136 52.381 6.34 0.00 0.00 4.01
2575 2627 1.305930 AATTTCCTCGGTCCGCAAGC 61.306 55.000 6.34 0.00 0.00 4.01
2576 2628 2.463589 ATTTCCTCGGTCCGCAAGCA 62.464 55.000 6.34 0.00 0.00 3.91
2577 2629 3.876589 TTCCTCGGTCCGCAAGCAC 62.877 63.158 6.34 0.00 0.00 4.40
2578 2630 4.680237 CCTCGGTCCGCAAGCACA 62.680 66.667 6.34 0.00 0.00 4.57
2579 2631 3.114616 CTCGGTCCGCAAGCACAG 61.115 66.667 6.34 0.00 0.00 3.66
2580 2632 3.573772 CTCGGTCCGCAAGCACAGA 62.574 63.158 6.34 0.00 0.00 3.41
2581 2633 2.434884 CGGTCCGCAAGCACAGAT 60.435 61.111 0.00 0.00 0.00 2.90
2582 2634 2.743752 CGGTCCGCAAGCACAGATG 61.744 63.158 0.00 0.00 0.00 2.90
2583 2635 1.672356 GGTCCGCAAGCACAGATGT 60.672 57.895 0.00 0.00 0.00 3.06
2584 2636 0.391130 GGTCCGCAAGCACAGATGTA 60.391 55.000 0.00 0.00 0.00 2.29
2585 2637 0.721718 GTCCGCAAGCACAGATGTAC 59.278 55.000 0.00 0.00 0.00 2.90
2586 2638 0.735978 TCCGCAAGCACAGATGTACG 60.736 55.000 0.00 0.00 0.00 3.67
2587 2639 0.735978 CCGCAAGCACAGATGTACGA 60.736 55.000 0.00 0.00 0.00 3.43
2588 2640 0.642291 CGCAAGCACAGATGTACGAG 59.358 55.000 0.00 0.00 0.00 4.18
2589 2641 1.732405 CGCAAGCACAGATGTACGAGA 60.732 52.381 0.00 0.00 0.00 4.04
2590 2642 1.656095 GCAAGCACAGATGTACGAGAC 59.344 52.381 0.00 0.00 0.00 3.36
2591 2643 2.263077 CAAGCACAGATGTACGAGACC 58.737 52.381 0.00 0.00 0.00 3.85
2592 2644 0.452184 AGCACAGATGTACGAGACCG 59.548 55.000 0.00 0.00 42.50 4.79
2602 2654 4.072913 CGAGACCGTCATCCAACG 57.927 61.111 0.40 0.00 42.24 4.10
2603 2655 2.158959 CGAGACCGTCATCCAACGC 61.159 63.158 0.40 0.00 41.26 4.84
2604 2656 1.215647 GAGACCGTCATCCAACGCT 59.784 57.895 0.40 0.00 41.26 5.07
2605 2657 0.454600 GAGACCGTCATCCAACGCTA 59.545 55.000 0.40 0.00 41.26 4.26
2606 2658 0.456221 AGACCGTCATCCAACGCTAG 59.544 55.000 0.40 0.00 41.26 3.42
2607 2659 1.146358 GACCGTCATCCAACGCTAGC 61.146 60.000 4.06 4.06 41.26 3.42
2608 2660 1.883084 CCGTCATCCAACGCTAGCC 60.883 63.158 9.66 0.00 41.26 3.93
2609 2661 1.153647 CGTCATCCAACGCTAGCCA 60.154 57.895 9.66 0.00 35.64 4.75
2610 2662 0.530650 CGTCATCCAACGCTAGCCAT 60.531 55.000 9.66 0.00 35.64 4.40
2611 2663 1.269569 CGTCATCCAACGCTAGCCATA 60.270 52.381 9.66 0.00 35.64 2.74
2612 2664 2.610479 CGTCATCCAACGCTAGCCATAT 60.610 50.000 9.66 0.00 35.64 1.78
2613 2665 3.403038 GTCATCCAACGCTAGCCATATT 58.597 45.455 9.66 0.00 0.00 1.28
2614 2666 3.433615 GTCATCCAACGCTAGCCATATTC 59.566 47.826 9.66 0.00 0.00 1.75
2615 2667 3.070878 TCATCCAACGCTAGCCATATTCA 59.929 43.478 9.66 0.00 0.00 2.57
2616 2668 3.769739 TCCAACGCTAGCCATATTCAT 57.230 42.857 9.66 0.00 0.00 2.57
2617 2669 4.085357 TCCAACGCTAGCCATATTCATT 57.915 40.909 9.66 0.00 0.00 2.57
2618 2670 3.814842 TCCAACGCTAGCCATATTCATTG 59.185 43.478 9.66 1.57 0.00 2.82
2619 2671 3.558505 CAACGCTAGCCATATTCATTGC 58.441 45.455 9.66 0.00 0.00 3.56
2620 2672 2.849942 ACGCTAGCCATATTCATTGCA 58.150 42.857 9.66 0.00 0.00 4.08
2621 2673 3.213506 ACGCTAGCCATATTCATTGCAA 58.786 40.909 9.66 0.00 0.00 4.08
2622 2674 3.631686 ACGCTAGCCATATTCATTGCAAA 59.368 39.130 9.66 0.00 0.00 3.68
2623 2675 3.976942 CGCTAGCCATATTCATTGCAAAC 59.023 43.478 9.66 0.00 0.00 2.93
2624 2676 4.261322 CGCTAGCCATATTCATTGCAAACT 60.261 41.667 9.66 0.00 0.00 2.66
2625 2677 5.218139 GCTAGCCATATTCATTGCAAACTC 58.782 41.667 1.71 0.00 0.00 3.01
2626 2678 5.221106 GCTAGCCATATTCATTGCAAACTCA 60.221 40.000 1.71 0.00 0.00 3.41
2627 2679 5.002464 AGCCATATTCATTGCAAACTCAC 57.998 39.130 1.71 0.00 0.00 3.51
2628 2680 4.708421 AGCCATATTCATTGCAAACTCACT 59.292 37.500 1.71 0.00 0.00 3.41
2629 2681 5.186409 AGCCATATTCATTGCAAACTCACTT 59.814 36.000 1.71 0.00 0.00 3.16
2630 2682 5.870978 GCCATATTCATTGCAAACTCACTTT 59.129 36.000 1.71 0.00 0.00 2.66
2631 2683 6.035327 GCCATATTCATTGCAAACTCACTTTC 59.965 38.462 1.71 0.00 0.00 2.62
2632 2684 7.092079 CCATATTCATTGCAAACTCACTTTCA 58.908 34.615 1.71 0.00 0.00 2.69
2633 2685 7.599621 CCATATTCATTGCAAACTCACTTTCAA 59.400 33.333 1.71 0.00 0.00 2.69
2634 2686 6.833342 ATTCATTGCAAACTCACTTTCAAC 57.167 33.333 1.71 0.00 0.00 3.18
2635 2687 5.321959 TCATTGCAAACTCACTTTCAACA 57.678 34.783 1.71 0.00 0.00 3.33
2636 2688 5.718146 TCATTGCAAACTCACTTTCAACAA 58.282 33.333 1.71 0.00 0.00 2.83
2637 2689 6.162079 TCATTGCAAACTCACTTTCAACAAA 58.838 32.000 1.71 0.00 0.00 2.83
2638 2690 6.817641 TCATTGCAAACTCACTTTCAACAAAT 59.182 30.769 1.71 0.00 0.00 2.32
2639 2691 7.333921 TCATTGCAAACTCACTTTCAACAAATT 59.666 29.630 1.71 0.00 0.00 1.82
2640 2692 6.406093 TGCAAACTCACTTTCAACAAATTG 57.594 33.333 0.00 0.00 37.14 2.32
2641 2693 5.350914 TGCAAACTCACTTTCAACAAATTGG 59.649 36.000 0.00 0.00 36.39 3.16
2642 2694 5.220643 GCAAACTCACTTTCAACAAATTGGG 60.221 40.000 0.00 0.00 36.39 4.12
2643 2695 5.675684 AACTCACTTTCAACAAATTGGGT 57.324 34.783 0.00 0.00 37.45 4.51
2644 2696 5.009854 ACTCACTTTCAACAAATTGGGTG 57.990 39.130 0.00 0.00 35.20 4.61
2645 2697 4.709397 ACTCACTTTCAACAAATTGGGTGA 59.291 37.500 0.00 0.00 35.20 4.02
2646 2698 5.186797 ACTCACTTTCAACAAATTGGGTGAA 59.813 36.000 9.35 9.35 35.20 3.18
2647 2699 6.042638 TCACTTTCAACAAATTGGGTGAAA 57.957 33.333 22.00 22.00 37.32 2.69
2648 2700 6.648192 TCACTTTCAACAAATTGGGTGAAAT 58.352 32.000 23.25 12.61 36.01 2.17
2649 2701 7.108847 TCACTTTCAACAAATTGGGTGAAATT 58.891 30.769 23.25 16.50 36.01 1.82
2650 2702 7.279758 TCACTTTCAACAAATTGGGTGAAATTC 59.720 33.333 23.25 0.00 36.01 2.17
2651 2703 7.065563 CACTTTCAACAAATTGGGTGAAATTCA 59.934 33.333 23.25 4.74 36.01 2.57
2652 2704 7.774625 ACTTTCAACAAATTGGGTGAAATTCAT 59.225 29.630 23.25 9.35 36.01 2.57
2653 2705 9.270640 CTTTCAACAAATTGGGTGAAATTCATA 57.729 29.630 23.25 3.72 36.01 2.15
2654 2706 9.618890 TTTCAACAAATTGGGTGAAATTCATAA 57.381 25.926 20.04 0.00 33.50 1.90
2655 2707 9.618890 TTCAACAAATTGGGTGAAATTCATAAA 57.381 25.926 11.03 0.00 36.39 1.40
2656 2708 9.618890 TCAACAAATTGGGTGAAATTCATAAAA 57.381 25.926 0.00 0.00 36.39 1.52
2657 2709 9.881529 CAACAAATTGGGTGAAATTCATAAAAG 57.118 29.630 0.00 0.00 31.63 2.27
2658 2710 8.098220 ACAAATTGGGTGAAATTCATAAAAGC 57.902 30.769 0.00 0.00 0.00 3.51
2659 2711 7.718753 ACAAATTGGGTGAAATTCATAAAAGCA 59.281 29.630 0.00 0.00 0.00 3.91
2660 2712 7.671495 AATTGGGTGAAATTCATAAAAGCAC 57.329 32.000 0.00 0.00 0.00 4.40
2661 2713 5.798125 TGGGTGAAATTCATAAAAGCACA 57.202 34.783 0.00 0.00 0.00 4.57
2662 2714 5.782047 TGGGTGAAATTCATAAAAGCACAG 58.218 37.500 0.00 0.00 0.00 3.66
2663 2715 4.627035 GGGTGAAATTCATAAAAGCACAGC 59.373 41.667 0.00 0.00 0.00 4.40
2664 2716 5.473039 GGTGAAATTCATAAAAGCACAGCT 58.527 37.500 0.00 0.00 42.56 4.24
2665 2717 5.346822 GGTGAAATTCATAAAAGCACAGCTG 59.653 40.000 13.48 13.48 39.62 4.24
2666 2718 5.346822 GTGAAATTCATAAAAGCACAGCTGG 59.653 40.000 19.93 8.27 39.62 4.85
2667 2719 5.243507 TGAAATTCATAAAAGCACAGCTGGA 59.756 36.000 19.93 0.00 39.62 3.86
2668 2720 5.927281 AATTCATAAAAGCACAGCTGGAT 57.073 34.783 19.93 2.55 39.62 3.41
2669 2721 5.927281 ATTCATAAAAGCACAGCTGGATT 57.073 34.783 19.93 9.24 39.62 3.01
2670 2722 5.726980 TTCATAAAAGCACAGCTGGATTT 57.273 34.783 19.93 14.76 39.62 2.17
2671 2723 5.726980 TCATAAAAGCACAGCTGGATTTT 57.273 34.783 24.40 24.40 39.62 1.82
2672 2724 6.832520 TCATAAAAGCACAGCTGGATTTTA 57.167 33.333 26.11 26.11 39.62 1.52
2673 2725 7.408756 TCATAAAAGCACAGCTGGATTTTAT 57.591 32.000 27.33 27.33 39.62 1.40
2674 2726 8.518430 TCATAAAAGCACAGCTGGATTTTATA 57.482 30.769 29.66 21.64 39.62 0.98
2675 2727 8.405531 TCATAAAAGCACAGCTGGATTTTATAC 58.594 33.333 29.66 10.14 39.62 1.47
2676 2728 6.588719 AAAAGCACAGCTGGATTTTATACA 57.411 33.333 21.67 0.00 39.62 2.29
2677 2729 6.588719 AAAGCACAGCTGGATTTTATACAA 57.411 33.333 19.93 0.00 39.62 2.41
2678 2730 6.588719 AAGCACAGCTGGATTTTATACAAA 57.411 33.333 19.93 0.00 39.62 2.83
2679 2731 5.954335 AGCACAGCTGGATTTTATACAAAC 58.046 37.500 19.93 0.00 37.57 2.93
2680 2732 5.102313 GCACAGCTGGATTTTATACAAACC 58.898 41.667 19.93 0.00 0.00 3.27
2681 2733 5.336372 GCACAGCTGGATTTTATACAAACCA 60.336 40.000 19.93 1.21 0.00 3.67
2682 2734 6.686630 CACAGCTGGATTTTATACAAACCAA 58.313 36.000 19.93 0.00 0.00 3.67
2683 2735 7.151308 CACAGCTGGATTTTATACAAACCAAA 58.849 34.615 19.93 0.00 0.00 3.28
2684 2736 7.818930 CACAGCTGGATTTTATACAAACCAAAT 59.181 33.333 19.93 0.00 0.00 2.32
2685 2737 7.818930 ACAGCTGGATTTTATACAAACCAAATG 59.181 33.333 19.93 6.37 0.00 2.32
2686 2738 8.034215 CAGCTGGATTTTATACAAACCAAATGA 58.966 33.333 5.57 0.00 0.00 2.57
2687 2739 8.592809 AGCTGGATTTTATACAAACCAAATGAA 58.407 29.630 2.67 0.00 0.00 2.57
2688 2740 9.213799 GCTGGATTTTATACAAACCAAATGAAA 57.786 29.630 2.67 0.00 0.00 2.69
2693 2745 8.943909 TTTTATACAAACCAAATGAAAACGGT 57.056 26.923 0.00 0.00 0.00 4.83
2694 2746 8.943909 TTTATACAAACCAAATGAAAACGGTT 57.056 26.923 0.00 0.00 43.55 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.416156 GGTTCTGGTCAAGAGAAGCATT 58.584 45.455 0.00 0.00 44.05 3.56
6 7 3.064900 GGTTCTGGTCAAGAGAAGCAT 57.935 47.619 0.00 0.00 44.05 3.79
7 8 2.550830 GGTTCTGGTCAAGAGAAGCA 57.449 50.000 0.00 0.00 44.05 3.91
8 9 2.147150 GTGGTTCTGGTCAAGAGAAGC 58.853 52.381 0.00 0.00 44.60 3.86
9 10 2.224066 ACGTGGTTCTGGTCAAGAGAAG 60.224 50.000 0.00 0.00 35.91 2.85
10 11 1.760613 ACGTGGTTCTGGTCAAGAGAA 59.239 47.619 0.00 0.00 35.91 2.87
11 12 1.410004 ACGTGGTTCTGGTCAAGAGA 58.590 50.000 0.00 0.00 35.91 3.10
12 13 1.867233 CAACGTGGTTCTGGTCAAGAG 59.133 52.381 0.00 0.00 35.91 2.85
13 14 1.948104 CAACGTGGTTCTGGTCAAGA 58.052 50.000 0.00 0.00 0.00 3.02
14 15 0.307760 GCAACGTGGTTCTGGTCAAG 59.692 55.000 0.00 0.00 0.00 3.02
15 16 1.433053 CGCAACGTGGTTCTGGTCAA 61.433 55.000 0.00 0.00 0.00 3.18
16 17 1.885388 CGCAACGTGGTTCTGGTCA 60.885 57.895 0.00 0.00 0.00 4.02
17 18 1.155424 TTCGCAACGTGGTTCTGGTC 61.155 55.000 0.00 0.00 0.00 4.02
18 19 1.153329 TTCGCAACGTGGTTCTGGT 60.153 52.632 0.00 0.00 0.00 4.00
19 20 0.878523 TCTTCGCAACGTGGTTCTGG 60.879 55.000 0.00 0.00 0.00 3.86
20 21 1.148310 ATCTTCGCAACGTGGTTCTG 58.852 50.000 0.00 0.00 0.00 3.02
21 22 1.798813 GAATCTTCGCAACGTGGTTCT 59.201 47.619 0.00 0.00 0.00 3.01
22 23 1.798813 AGAATCTTCGCAACGTGGTTC 59.201 47.619 0.00 0.00 0.00 3.62
23 24 1.878953 AGAATCTTCGCAACGTGGTT 58.121 45.000 0.00 0.00 0.00 3.67
24 25 1.878953 AAGAATCTTCGCAACGTGGT 58.121 45.000 0.00 0.00 0.00 4.16
25 26 4.600012 ATTAAGAATCTTCGCAACGTGG 57.400 40.909 0.00 0.00 0.00 4.94
26 27 6.797033 AGAAAATTAAGAATCTTCGCAACGTG 59.203 34.615 0.00 0.00 0.00 4.49
27 28 6.899114 AGAAAATTAAGAATCTTCGCAACGT 58.101 32.000 0.00 0.00 0.00 3.99
28 29 7.533900 TGAAGAAAATTAAGAATCTTCGCAACG 59.466 33.333 0.00 0.00 46.80 4.10
29 30 8.728088 TGAAGAAAATTAAGAATCTTCGCAAC 57.272 30.769 0.00 0.00 46.80 4.17
30 31 9.743057 TTTGAAGAAAATTAAGAATCTTCGCAA 57.257 25.926 0.00 11.35 46.80 4.85
31 32 9.912634 ATTTGAAGAAAATTAAGAATCTTCGCA 57.087 25.926 0.00 9.46 46.80 5.10
98 99 9.630098 CAAGCAATTCACAACAGTATAAGAAAT 57.370 29.630 0.00 0.00 0.00 2.17
99 100 8.629158 ACAAGCAATTCACAACAGTATAAGAAA 58.371 29.630 0.00 0.00 0.00 2.52
100 101 8.165239 ACAAGCAATTCACAACAGTATAAGAA 57.835 30.769 0.00 0.00 0.00 2.52
101 102 7.094805 GGACAAGCAATTCACAACAGTATAAGA 60.095 37.037 0.00 0.00 0.00 2.10
102 103 7.023575 GGACAAGCAATTCACAACAGTATAAG 58.976 38.462 0.00 0.00 0.00 1.73
103 104 6.348132 CGGACAAGCAATTCACAACAGTATAA 60.348 38.462 0.00 0.00 0.00 0.98
104 105 5.121611 CGGACAAGCAATTCACAACAGTATA 59.878 40.000 0.00 0.00 0.00 1.47
105 106 4.083324 CGGACAAGCAATTCACAACAGTAT 60.083 41.667 0.00 0.00 0.00 2.12
106 107 3.249799 CGGACAAGCAATTCACAACAGTA 59.750 43.478 0.00 0.00 0.00 2.74
107 108 2.033299 CGGACAAGCAATTCACAACAGT 59.967 45.455 0.00 0.00 0.00 3.55
108 109 2.653890 CGGACAAGCAATTCACAACAG 58.346 47.619 0.00 0.00 0.00 3.16
109 110 1.268999 GCGGACAAGCAATTCACAACA 60.269 47.619 0.00 0.00 37.05 3.33
110 111 1.268999 TGCGGACAAGCAATTCACAAC 60.269 47.619 0.00 0.00 45.06 3.32
111 112 1.028130 TGCGGACAAGCAATTCACAA 58.972 45.000 0.00 0.00 45.06 3.33
112 113 2.712984 TGCGGACAAGCAATTCACA 58.287 47.368 0.00 0.00 45.06 3.58
143 144 8.875168 TCTATTCAGGTTCTCTCTCTTCTTTTT 58.125 33.333 0.00 0.00 0.00 1.94
144 145 8.429237 TCTATTCAGGTTCTCTCTCTTCTTTT 57.571 34.615 0.00 0.00 0.00 2.27
145 146 7.363793 GCTCTATTCAGGTTCTCTCTCTTCTTT 60.364 40.741 0.00 0.00 0.00 2.52
146 147 6.096846 GCTCTATTCAGGTTCTCTCTCTTCTT 59.903 42.308 0.00 0.00 0.00 2.52
147 148 5.594317 GCTCTATTCAGGTTCTCTCTCTTCT 59.406 44.000 0.00 0.00 0.00 2.85
148 149 5.505654 CGCTCTATTCAGGTTCTCTCTCTTC 60.506 48.000 0.00 0.00 0.00 2.87
149 150 4.338118 CGCTCTATTCAGGTTCTCTCTCTT 59.662 45.833 0.00 0.00 0.00 2.85
150 151 3.882888 CGCTCTATTCAGGTTCTCTCTCT 59.117 47.826 0.00 0.00 0.00 3.10
151 152 3.880490 TCGCTCTATTCAGGTTCTCTCTC 59.120 47.826 0.00 0.00 0.00 3.20
152 153 3.892284 TCGCTCTATTCAGGTTCTCTCT 58.108 45.455 0.00 0.00 0.00 3.10
153 154 4.336993 TCTTCGCTCTATTCAGGTTCTCTC 59.663 45.833 0.00 0.00 0.00 3.20
154 155 4.097286 GTCTTCGCTCTATTCAGGTTCTCT 59.903 45.833 0.00 0.00 0.00 3.10
155 156 4.356289 GTCTTCGCTCTATTCAGGTTCTC 58.644 47.826 0.00 0.00 0.00 2.87
156 157 3.131400 GGTCTTCGCTCTATTCAGGTTCT 59.869 47.826 0.00 0.00 0.00 3.01
157 158 3.449632 GGTCTTCGCTCTATTCAGGTTC 58.550 50.000 0.00 0.00 0.00 3.62
158 159 2.159226 CGGTCTTCGCTCTATTCAGGTT 60.159 50.000 0.00 0.00 0.00 3.50
159 160 1.405821 CGGTCTTCGCTCTATTCAGGT 59.594 52.381 0.00 0.00 0.00 4.00
160 161 1.676529 TCGGTCTTCGCTCTATTCAGG 59.323 52.381 0.00 0.00 39.05 3.86
161 162 3.422417 TTCGGTCTTCGCTCTATTCAG 57.578 47.619 0.00 0.00 39.05 3.02
162 163 3.861276 TTTCGGTCTTCGCTCTATTCA 57.139 42.857 0.00 0.00 39.05 2.57
182 183 3.564225 GGCATTCGGGTATCTCGATTTTT 59.436 43.478 0.00 0.00 36.49 1.94
183 184 3.139077 GGCATTCGGGTATCTCGATTTT 58.861 45.455 0.00 0.00 36.49 1.82
184 185 2.550208 GGGCATTCGGGTATCTCGATTT 60.550 50.000 0.00 0.00 36.49 2.17
185 186 1.002087 GGGCATTCGGGTATCTCGATT 59.998 52.381 0.00 0.00 36.49 3.34
186 187 0.608640 GGGCATTCGGGTATCTCGAT 59.391 55.000 0.00 0.00 36.49 3.59
187 188 0.757561 TGGGCATTCGGGTATCTCGA 60.758 55.000 0.00 0.00 34.62 4.04
188 189 0.600255 GTGGGCATTCGGGTATCTCG 60.600 60.000 0.00 0.00 0.00 4.04
189 190 0.759346 AGTGGGCATTCGGGTATCTC 59.241 55.000 0.00 0.00 0.00 2.75
190 191 0.759346 GAGTGGGCATTCGGGTATCT 59.241 55.000 0.00 0.00 0.00 1.98
191 192 0.759346 AGAGTGGGCATTCGGGTATC 59.241 55.000 0.00 0.00 0.00 2.24
192 193 0.469917 CAGAGTGGGCATTCGGGTAT 59.530 55.000 0.00 0.00 0.00 2.73
193 194 0.616395 TCAGAGTGGGCATTCGGGTA 60.616 55.000 0.00 0.00 0.00 3.69
194 195 1.488705 TTCAGAGTGGGCATTCGGGT 61.489 55.000 0.00 0.00 0.00 5.28
195 196 0.322456 TTTCAGAGTGGGCATTCGGG 60.322 55.000 0.00 0.00 0.00 5.14
196 197 1.470098 CTTTTCAGAGTGGGCATTCGG 59.530 52.381 0.00 0.00 0.00 4.30
197 198 2.154462 ACTTTTCAGAGTGGGCATTCG 58.846 47.619 0.00 0.00 0.00 3.34
198 199 4.378459 CGTAACTTTTCAGAGTGGGCATTC 60.378 45.833 0.00 0.00 0.00 2.67
199 200 3.502211 CGTAACTTTTCAGAGTGGGCATT 59.498 43.478 0.00 0.00 0.00 3.56
200 201 3.074412 CGTAACTTTTCAGAGTGGGCAT 58.926 45.455 0.00 0.00 0.00 4.40
201 202 2.103432 TCGTAACTTTTCAGAGTGGGCA 59.897 45.455 0.00 0.00 0.00 5.36
202 203 2.479275 GTCGTAACTTTTCAGAGTGGGC 59.521 50.000 0.00 0.00 0.00 5.36
203 204 3.064931 GGTCGTAACTTTTCAGAGTGGG 58.935 50.000 0.00 0.00 0.00 4.61
204 205 3.991367 AGGTCGTAACTTTTCAGAGTGG 58.009 45.455 0.00 0.00 0.00 4.00
205 206 5.975442 GAAAGGTCGTAACTTTTCAGAGTG 58.025 41.667 7.91 0.00 45.76 3.51
211 212 2.804527 AGCGGAAAGGTCGTAACTTTTC 59.195 45.455 4.99 4.99 45.74 2.29
212 213 2.546789 CAGCGGAAAGGTCGTAACTTTT 59.453 45.455 0.00 0.00 38.21 2.27
213 214 2.140717 CAGCGGAAAGGTCGTAACTTT 58.859 47.619 0.00 0.00 40.61 2.66
214 215 1.792006 CAGCGGAAAGGTCGTAACTT 58.208 50.000 0.00 0.00 0.00 2.66
215 216 0.669625 GCAGCGGAAAGGTCGTAACT 60.670 55.000 0.00 0.00 0.00 2.24
216 217 0.669625 AGCAGCGGAAAGGTCGTAAC 60.670 55.000 0.00 0.00 0.00 2.50
217 218 0.669318 CAGCAGCGGAAAGGTCGTAA 60.669 55.000 0.00 0.00 0.00 3.18
218 219 1.080093 CAGCAGCGGAAAGGTCGTA 60.080 57.895 0.00 0.00 0.00 3.43
219 220 2.357517 CAGCAGCGGAAAGGTCGT 60.358 61.111 0.00 0.00 0.00 4.34
220 221 1.507141 AAACAGCAGCGGAAAGGTCG 61.507 55.000 0.00 0.00 0.00 4.79
221 222 1.519408 TAAACAGCAGCGGAAAGGTC 58.481 50.000 0.00 0.00 0.00 3.85
255 257 7.873739 AATTCGTCAAACTCCAATTCAAATC 57.126 32.000 0.00 0.00 0.00 2.17
345 347 3.545124 AATGCACCGCCGGAGACAA 62.545 57.895 11.71 0.00 0.00 3.18
392 394 9.911788 AGAGAATAGATTGTCATTGTTAATGGT 57.088 29.630 2.63 0.00 39.38 3.55
432 434 1.519455 CGTGGACGGATCCTCTTGC 60.519 63.158 10.75 0.00 46.43 4.01
434 436 2.722201 GGCGTGGACGGATCCTCTT 61.722 63.158 10.75 0.00 46.43 2.85
435 437 3.148279 GGCGTGGACGGATCCTCT 61.148 66.667 10.75 0.00 46.43 3.69
479 481 0.249120 TGTTCTGGTATGGGCGTCTG 59.751 55.000 0.00 0.00 0.00 3.51
713 715 1.222115 GCTTCACGCACCTTCTTCGT 61.222 55.000 0.00 0.00 38.92 3.85
777 793 1.194547 AGCGCGGCATTAACATAATCG 59.805 47.619 8.83 0.00 0.00 3.34
901 917 2.803670 CGCACCACGTACACTCCG 60.804 66.667 0.00 0.00 36.87 4.63
953 969 0.526524 GCTCACGAGGATCTTGGACG 60.527 60.000 0.00 0.00 34.74 4.79
1026 1042 1.227176 GAAGCCATACCCGTCCGAC 60.227 63.158 0.00 0.00 0.00 4.79
1027 1043 2.428925 GGAAGCCATACCCGTCCGA 61.429 63.158 0.00 0.00 0.00 4.55
1030 1046 2.509422 GGGGAAGCCATACCCGTC 59.491 66.667 0.00 0.00 46.42 4.79
1033 1049 2.195956 GCAGGGGAAGCCATACCC 59.804 66.667 0.00 0.00 45.06 3.69
1034 1050 2.203209 CGCAGGGGAAGCCATACC 60.203 66.667 0.00 0.00 0.00 2.73
1683 1708 1.003696 AGGACCTTTTACTGAGCTGCC 59.996 52.381 0.00 0.00 0.00 4.85
1700 1725 3.744719 CGTCGAGGTTGGCGAGGA 61.745 66.667 0.00 0.00 43.83 3.71
1713 1738 3.213249 ACCTTAGTCTTTAGTGCGTCG 57.787 47.619 0.00 0.00 0.00 5.12
1786 1811 0.454452 CGCTCGATCTTGTCACGACA 60.454 55.000 0.00 0.00 39.98 4.35
1815 1840 2.922950 TACAGCCCGTGTCCGTGTC 61.923 63.158 0.00 0.00 40.94 3.67
1816 1841 2.913578 TACAGCCCGTGTCCGTGT 60.914 61.111 0.00 0.00 40.94 4.49
1817 1842 2.431942 GTACAGCCCGTGTCCGTG 60.432 66.667 0.00 0.00 40.94 4.94
1818 1843 3.688159 GGTACAGCCCGTGTCCGT 61.688 66.667 0.00 0.00 40.94 4.69
1819 1844 3.379445 AGGTACAGCCCGTGTCCG 61.379 66.667 0.00 0.00 40.94 4.79
1820 1845 1.252904 TACAGGTACAGCCCGTGTCC 61.253 60.000 0.00 0.00 40.94 4.02
1821 1846 0.108945 GTACAGGTACAGCCCGTGTC 60.109 60.000 4.76 0.00 40.94 3.67
1914 1939 2.032620 ACTAATCCTCGCATCGGTTCT 58.967 47.619 0.00 0.00 0.00 3.01
1958 1984 0.657840 GTGCCCGCATAAGTAAGCAG 59.342 55.000 0.00 0.00 0.00 4.24
1959 1985 0.035915 TGTGCCCGCATAAGTAAGCA 60.036 50.000 0.00 0.00 0.00 3.91
1960 1986 1.091537 TTGTGCCCGCATAAGTAAGC 58.908 50.000 0.00 0.00 0.00 3.09
1961 1987 2.942376 TCATTGTGCCCGCATAAGTAAG 59.058 45.455 5.13 0.00 30.98 2.34
1964 1990 1.094785 GTCATTGTGCCCGCATAAGT 58.905 50.000 5.13 0.00 30.98 2.24
2015 2041 3.746949 GATCTGCCAGCCCCTGTCG 62.747 68.421 0.00 0.00 0.00 4.35
2023 2049 0.174389 TTCTCACTCGATCTGCCAGC 59.826 55.000 0.00 0.00 0.00 4.85
2079 2105 9.595823 CTCTTTATTCTACGTAAATGGGAAAGA 57.404 33.333 16.01 16.01 0.00 2.52
2080 2106 9.595823 TCTCTTTATTCTACGTAAATGGGAAAG 57.404 33.333 0.00 7.12 0.00 2.62
2081 2107 9.947433 TTCTCTTTATTCTACGTAAATGGGAAA 57.053 29.630 0.00 0.00 0.00 3.13
2136 2164 1.705337 CCGTCGGTTGGCATGATCAC 61.705 60.000 2.08 0.00 0.00 3.06
2182 2210 9.173021 TGATACGTTCTAATCATTTGTGGATTT 57.827 29.630 0.00 0.00 36.45 2.17
2187 2215 6.901887 GCACTGATACGTTCTAATCATTTGTG 59.098 38.462 0.00 3.12 32.85 3.33
2213 2244 1.899814 AGATTGTGGAGGCTACGTTCA 59.100 47.619 0.00 0.00 0.00 3.18
2286 2317 2.423538 AGCAAAGTTATTGGCCGATGAC 59.576 45.455 18.25 18.25 35.80 3.06
2447 2488 2.064581 AGGGGTATCCTCCGTGCAC 61.065 63.158 6.82 6.82 44.06 4.57
2468 2509 3.971109 GACCAGGTTACAGGCCGGC 62.971 68.421 21.18 21.18 0.00 6.13
2478 2530 1.307647 GCATGGGATGGACCAGGTT 59.692 57.895 0.00 0.00 45.20 3.50
2500 2552 3.956317 TGCTGCTGTGTGCGCAAG 61.956 61.111 14.00 7.61 46.63 4.01
2514 2566 2.224967 ACTCTGAGCCTTTTGGAATGCT 60.225 45.455 4.19 0.00 44.07 3.79
2515 2567 2.165998 ACTCTGAGCCTTTTGGAATGC 58.834 47.619 4.19 0.00 44.07 3.56
2516 2568 5.435291 AGATACTCTGAGCCTTTTGGAATG 58.565 41.667 4.19 0.00 44.07 2.67
2531 2583 1.827969 AGCAGCCGTTGAAGATACTCT 59.172 47.619 0.00 0.00 0.00 3.24
2532 2584 2.301577 AGCAGCCGTTGAAGATACTC 57.698 50.000 0.00 0.00 0.00 2.59
2533 2585 2.350522 CAAGCAGCCGTTGAAGATACT 58.649 47.619 0.00 0.00 0.00 2.12
2534 2586 1.202076 GCAAGCAGCCGTTGAAGATAC 60.202 52.381 0.00 0.00 37.23 2.24
2535 2587 1.086696 GCAAGCAGCCGTTGAAGATA 58.913 50.000 0.00 0.00 37.23 1.98
2536 2588 0.890542 TGCAAGCAGCCGTTGAAGAT 60.891 50.000 0.00 0.00 44.83 2.40
2537 2589 1.100463 TTGCAAGCAGCCGTTGAAGA 61.100 50.000 0.00 0.00 44.83 2.87
2538 2590 0.248990 TTTGCAAGCAGCCGTTGAAG 60.249 50.000 0.00 0.00 44.83 3.02
2539 2591 0.388659 ATTTGCAAGCAGCCGTTGAA 59.611 45.000 0.00 0.00 44.83 2.69
2540 2592 0.388659 AATTTGCAAGCAGCCGTTGA 59.611 45.000 0.00 0.00 44.83 3.18
2541 2593 1.192980 GAAATTTGCAAGCAGCCGTTG 59.807 47.619 0.00 0.00 44.83 4.10
2542 2594 1.501169 GAAATTTGCAAGCAGCCGTT 58.499 45.000 0.00 0.00 44.83 4.44
2543 2595 0.319813 GGAAATTTGCAAGCAGCCGT 60.320 50.000 4.63 0.00 44.83 5.68
2544 2596 0.037975 AGGAAATTTGCAAGCAGCCG 60.038 50.000 12.54 0.00 44.83 5.52
2545 2597 1.718396 GAGGAAATTTGCAAGCAGCC 58.282 50.000 12.54 0.72 44.83 4.85
2546 2598 1.343506 CGAGGAAATTTGCAAGCAGC 58.656 50.000 12.54 0.00 45.96 5.25
2547 2599 1.270550 ACCGAGGAAATTTGCAAGCAG 59.729 47.619 12.54 0.00 0.00 4.24
2548 2600 1.269448 GACCGAGGAAATTTGCAAGCA 59.731 47.619 12.54 0.00 0.00 3.91
2549 2601 1.402852 GGACCGAGGAAATTTGCAAGC 60.403 52.381 12.54 0.30 0.00 4.01
2550 2602 1.135689 CGGACCGAGGAAATTTGCAAG 60.136 52.381 8.64 5.09 0.00 4.01
2551 2603 0.878416 CGGACCGAGGAAATTTGCAA 59.122 50.000 8.64 0.00 0.00 4.08
2552 2604 1.582610 GCGGACCGAGGAAATTTGCA 61.583 55.000 20.50 0.00 0.00 4.08
2553 2605 1.136774 GCGGACCGAGGAAATTTGC 59.863 57.895 20.50 0.68 0.00 3.68
2554 2606 0.878416 TTGCGGACCGAGGAAATTTG 59.122 50.000 20.50 0.00 0.00 2.32
2555 2607 1.165270 CTTGCGGACCGAGGAAATTT 58.835 50.000 20.50 0.00 0.00 1.82
2556 2608 1.305930 GCTTGCGGACCGAGGAAATT 61.306 55.000 20.50 0.00 0.00 1.82
2557 2609 1.745489 GCTTGCGGACCGAGGAAAT 60.745 57.895 20.50 0.00 0.00 2.17
2558 2610 2.358247 GCTTGCGGACCGAGGAAA 60.358 61.111 20.50 4.84 0.00 3.13
2559 2611 3.621805 TGCTTGCGGACCGAGGAA 61.622 61.111 20.50 5.65 0.00 3.36
2560 2612 4.373116 GTGCTTGCGGACCGAGGA 62.373 66.667 20.50 5.22 0.00 3.71
2561 2613 4.680237 TGTGCTTGCGGACCGAGG 62.680 66.667 20.50 7.45 0.00 4.63
2562 2614 2.842394 ATCTGTGCTTGCGGACCGAG 62.842 60.000 20.50 8.30 29.24 4.63
2563 2615 2.942796 ATCTGTGCTTGCGGACCGA 61.943 57.895 20.50 0.00 0.00 4.69
2564 2616 2.434884 ATCTGTGCTTGCGGACCG 60.435 61.111 10.29 10.29 0.00 4.79
2565 2617 0.391130 TACATCTGTGCTTGCGGACC 60.391 55.000 0.00 0.00 0.00 4.46
2566 2618 0.721718 GTACATCTGTGCTTGCGGAC 59.278 55.000 0.00 0.00 0.00 4.79
2567 2619 0.735978 CGTACATCTGTGCTTGCGGA 60.736 55.000 0.00 0.00 0.00 5.54
2568 2620 0.735978 TCGTACATCTGTGCTTGCGG 60.736 55.000 0.00 0.00 0.00 5.69
2569 2621 0.642291 CTCGTACATCTGTGCTTGCG 59.358 55.000 0.00 0.00 0.00 4.85
2570 2622 1.656095 GTCTCGTACATCTGTGCTTGC 59.344 52.381 0.00 0.00 0.00 4.01
2571 2623 2.263077 GGTCTCGTACATCTGTGCTTG 58.737 52.381 0.00 0.00 0.00 4.01
2572 2624 1.135373 CGGTCTCGTACATCTGTGCTT 60.135 52.381 0.00 0.00 0.00 3.91
2573 2625 0.452184 CGGTCTCGTACATCTGTGCT 59.548 55.000 0.00 0.00 0.00 4.40
2574 2626 2.945315 CGGTCTCGTACATCTGTGC 58.055 57.895 0.00 0.00 0.00 4.57
2585 2637 2.158959 GCGTTGGATGACGGTCTCG 61.159 63.158 9.88 6.02 42.98 4.04
2586 2638 3.782042 GCGTTGGATGACGGTCTC 58.218 61.111 9.88 4.59 42.98 3.36
2590 2642 1.883084 GGCTAGCGTTGGATGACGG 60.883 63.158 9.00 0.00 42.98 4.79
2591 2643 0.530650 ATGGCTAGCGTTGGATGACG 60.531 55.000 9.00 0.00 45.40 4.35
2592 2644 2.526304 TATGGCTAGCGTTGGATGAC 57.474 50.000 9.00 0.00 0.00 3.06
2593 2645 3.070878 TGAATATGGCTAGCGTTGGATGA 59.929 43.478 9.00 0.00 0.00 2.92
2594 2646 3.402110 TGAATATGGCTAGCGTTGGATG 58.598 45.455 9.00 0.00 0.00 3.51
2595 2647 3.769739 TGAATATGGCTAGCGTTGGAT 57.230 42.857 9.00 0.00 0.00 3.41
2596 2648 3.769739 ATGAATATGGCTAGCGTTGGA 57.230 42.857 9.00 0.00 0.00 3.53
2597 2649 3.610114 GCAATGAATATGGCTAGCGTTGG 60.610 47.826 9.00 0.00 30.12 3.77
2598 2650 3.003585 TGCAATGAATATGGCTAGCGTTG 59.996 43.478 9.00 0.53 34.15 4.10
2599 2651 3.213506 TGCAATGAATATGGCTAGCGTT 58.786 40.909 9.00 0.54 34.15 4.84
2600 2652 2.849942 TGCAATGAATATGGCTAGCGT 58.150 42.857 9.00 2.31 34.15 5.07
2601 2653 3.902261 TTGCAATGAATATGGCTAGCG 57.098 42.857 9.00 0.00 34.15 4.26
2602 2654 5.192327 AGTTTGCAATGAATATGGCTAGC 57.808 39.130 6.04 6.04 34.15 3.42
2603 2655 6.039047 AGTGAGTTTGCAATGAATATGGCTAG 59.961 38.462 0.00 0.00 34.15 3.42
2604 2656 5.887598 AGTGAGTTTGCAATGAATATGGCTA 59.112 36.000 0.00 0.00 34.15 3.93
2605 2657 4.708421 AGTGAGTTTGCAATGAATATGGCT 59.292 37.500 0.00 0.00 34.15 4.75
2606 2658 5.002464 AGTGAGTTTGCAATGAATATGGC 57.998 39.130 0.00 0.00 33.59 4.40
2607 2659 7.092079 TGAAAGTGAGTTTGCAATGAATATGG 58.908 34.615 0.00 0.00 0.00 2.74
2608 2660 8.430063 GTTGAAAGTGAGTTTGCAATGAATATG 58.570 33.333 0.00 0.00 0.00 1.78
2609 2661 8.143193 TGTTGAAAGTGAGTTTGCAATGAATAT 58.857 29.630 0.00 0.00 0.00 1.28
2610 2662 7.487484 TGTTGAAAGTGAGTTTGCAATGAATA 58.513 30.769 0.00 0.00 0.00 1.75
2611 2663 6.339730 TGTTGAAAGTGAGTTTGCAATGAAT 58.660 32.000 0.00 0.00 0.00 2.57
2612 2664 5.718146 TGTTGAAAGTGAGTTTGCAATGAA 58.282 33.333 0.00 0.00 0.00 2.57
2613 2665 5.321959 TGTTGAAAGTGAGTTTGCAATGA 57.678 34.783 0.00 0.00 0.00 2.57
2614 2666 6.406093 TTTGTTGAAAGTGAGTTTGCAATG 57.594 33.333 0.00 0.00 0.00 2.82
2615 2667 7.414319 CCAATTTGTTGAAAGTGAGTTTGCAAT 60.414 33.333 0.00 0.00 39.07 3.56
2616 2668 6.128336 CCAATTTGTTGAAAGTGAGTTTGCAA 60.128 34.615 0.00 0.00 39.07 4.08
2617 2669 5.350914 CCAATTTGTTGAAAGTGAGTTTGCA 59.649 36.000 0.00 0.00 39.07 4.08
2618 2670 5.220643 CCCAATTTGTTGAAAGTGAGTTTGC 60.221 40.000 0.00 0.00 39.07 3.68
2619 2671 5.874261 ACCCAATTTGTTGAAAGTGAGTTTG 59.126 36.000 0.00 0.00 39.07 2.93
2620 2672 5.874261 CACCCAATTTGTTGAAAGTGAGTTT 59.126 36.000 0.00 0.00 39.07 2.66
2621 2673 5.186797 TCACCCAATTTGTTGAAAGTGAGTT 59.813 36.000 0.00 0.00 39.07 3.01
2622 2674 4.709397 TCACCCAATTTGTTGAAAGTGAGT 59.291 37.500 0.00 0.00 39.07 3.41
2623 2675 5.261209 TCACCCAATTTGTTGAAAGTGAG 57.739 39.130 0.00 0.00 39.07 3.51
2624 2676 5.667539 TTCACCCAATTTGTTGAAAGTGA 57.332 34.783 7.77 0.00 39.07 3.41
2625 2677 6.923928 ATTTCACCCAATTTGTTGAAAGTG 57.076 33.333 19.79 8.79 36.99 3.16
2626 2678 7.108847 TGAATTTCACCCAATTTGTTGAAAGT 58.891 30.769 19.79 18.41 0.00 2.66
2627 2679 7.551035 TGAATTTCACCCAATTTGTTGAAAG 57.449 32.000 19.79 0.00 0.00 2.62
2628 2680 9.618890 TTATGAATTTCACCCAATTTGTTGAAA 57.381 25.926 18.43 18.43 0.00 2.69
2629 2681 9.618890 TTTATGAATTTCACCCAATTTGTTGAA 57.381 25.926 0.15 6.59 0.00 2.69
2630 2682 9.618890 TTTTATGAATTTCACCCAATTTGTTGA 57.381 25.926 0.15 0.00 0.00 3.18
2631 2683 9.881529 CTTTTATGAATTTCACCCAATTTGTTG 57.118 29.630 0.15 0.00 0.00 3.33
2632 2684 8.567104 GCTTTTATGAATTTCACCCAATTTGTT 58.433 29.630 0.15 0.00 0.00 2.83
2633 2685 7.718753 TGCTTTTATGAATTTCACCCAATTTGT 59.281 29.630 0.15 0.00 0.00 2.83
2634 2686 8.016801 GTGCTTTTATGAATTTCACCCAATTTG 58.983 33.333 0.15 0.00 0.00 2.32
2635 2687 7.718753 TGTGCTTTTATGAATTTCACCCAATTT 59.281 29.630 0.15 0.00 0.00 1.82
2636 2688 7.222872 TGTGCTTTTATGAATTTCACCCAATT 58.777 30.769 0.15 0.00 0.00 2.32
2637 2689 6.767456 TGTGCTTTTATGAATTTCACCCAAT 58.233 32.000 0.15 0.00 0.00 3.16
2638 2690 6.166984 TGTGCTTTTATGAATTTCACCCAA 57.833 33.333 0.15 0.00 0.00 4.12
2639 2691 5.782047 CTGTGCTTTTATGAATTTCACCCA 58.218 37.500 0.15 0.00 0.00 4.51
2640 2692 4.627035 GCTGTGCTTTTATGAATTTCACCC 59.373 41.667 0.15 0.00 0.00 4.61
2641 2693 5.346822 CAGCTGTGCTTTTATGAATTTCACC 59.653 40.000 5.25 0.00 36.40 4.02
2642 2694 5.346822 CCAGCTGTGCTTTTATGAATTTCAC 59.653 40.000 13.81 0.00 36.40 3.18
2643 2695 5.243507 TCCAGCTGTGCTTTTATGAATTTCA 59.756 36.000 13.81 0.75 36.40 2.69
2644 2696 5.713025 TCCAGCTGTGCTTTTATGAATTTC 58.287 37.500 13.81 0.00 36.40 2.17
2645 2697 5.726980 TCCAGCTGTGCTTTTATGAATTT 57.273 34.783 13.81 0.00 36.40 1.82
2646 2698 5.927281 ATCCAGCTGTGCTTTTATGAATT 57.073 34.783 13.81 0.00 36.40 2.17
2647 2699 5.927281 AATCCAGCTGTGCTTTTATGAAT 57.073 34.783 13.81 0.00 36.40 2.57
2648 2700 5.726980 AAATCCAGCTGTGCTTTTATGAA 57.273 34.783 13.81 0.00 36.40 2.57
2649 2701 5.726980 AAAATCCAGCTGTGCTTTTATGA 57.273 34.783 13.81 0.00 36.40 2.15
2650 2702 8.190122 TGTATAAAATCCAGCTGTGCTTTTATG 58.810 33.333 27.56 9.98 36.40 1.90
2651 2703 8.292444 TGTATAAAATCCAGCTGTGCTTTTAT 57.708 30.769 25.32 25.32 36.40 1.40
2652 2704 7.695480 TGTATAAAATCCAGCTGTGCTTTTA 57.305 32.000 13.81 17.36 36.40 1.52
2653 2705 6.588719 TGTATAAAATCCAGCTGTGCTTTT 57.411 33.333 13.81 15.92 36.40 2.27
2654 2706 6.588719 TTGTATAAAATCCAGCTGTGCTTT 57.411 33.333 13.81 10.63 36.40 3.51
2655 2707 6.389906 GTTTGTATAAAATCCAGCTGTGCTT 58.610 36.000 13.81 3.05 36.40 3.91
2656 2708 5.105756 GGTTTGTATAAAATCCAGCTGTGCT 60.106 40.000 13.81 0.00 40.77 4.40
2657 2709 5.102313 GGTTTGTATAAAATCCAGCTGTGC 58.898 41.667 13.81 0.00 0.00 4.57
2658 2710 6.266168 TGGTTTGTATAAAATCCAGCTGTG 57.734 37.500 13.81 4.33 0.00 3.66
2659 2711 6.909550 TTGGTTTGTATAAAATCCAGCTGT 57.090 33.333 13.81 0.00 0.00 4.40
2660 2712 8.034215 TCATTTGGTTTGTATAAAATCCAGCTG 58.966 33.333 6.78 6.78 0.00 4.24
2661 2713 8.133024 TCATTTGGTTTGTATAAAATCCAGCT 57.867 30.769 5.72 0.00 0.00 4.24
2662 2714 8.770438 TTCATTTGGTTTGTATAAAATCCAGC 57.230 30.769 5.72 0.00 0.00 4.85
2667 2719 9.549078 ACCGTTTTCATTTGGTTTGTATAAAAT 57.451 25.926 0.00 0.00 0.00 1.82
2668 2720 8.943909 ACCGTTTTCATTTGGTTTGTATAAAA 57.056 26.923 0.00 0.00 0.00 1.52
2669 2721 8.943909 AACCGTTTTCATTTGGTTTGTATAAA 57.056 26.923 0.00 0.00 41.80 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.