Multiple sequence alignment - TraesCS2A01G412000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G412000 chr2A 100.000 5639 0 0 1 5639 669636729 669631091 0.000000e+00 10414.0
1 TraesCS2A01G412000 chr2A 81.273 534 89 10 5114 5639 18637484 18638014 6.750000e-114 422.0
2 TraesCS2A01G412000 chr2A 100.000 29 0 0 4932 4960 442786219 442786191 3.000000e-03 54.7
3 TraesCS2A01G412000 chr2B 86.648 2524 167 81 7 2441 619397587 619395145 0.000000e+00 2638.0
4 TraesCS2A01G412000 chr2B 91.296 494 33 5 4449 4932 619392264 619391771 0.000000e+00 665.0
5 TraesCS2A01G412000 chr2B 87.869 305 26 6 3722 4024 619395008 619394713 1.160000e-91 348.0
6 TraesCS2A01G412000 chr2B 95.522 134 6 0 4245 4378 551567868 551568001 1.230000e-51 215.0
7 TraesCS2A01G412000 chr2B 94.245 139 8 0 4245 4383 520150025 520149887 4.430000e-51 213.0
8 TraesCS2A01G412000 chr2B 86.806 144 19 0 4229 4372 520149881 520150024 1.630000e-35 161.0
9 TraesCS2A01G412000 chr2B 84.536 97 8 6 2898 2991 619395152 619395060 7.780000e-14 89.8
10 TraesCS2A01G412000 chr2B 92.000 50 4 0 4409 4458 619393813 619393764 2.820000e-08 71.3
11 TraesCS2A01G412000 chr2D 89.785 2144 100 49 7 2087 524051329 524049242 0.000000e+00 2636.0
12 TraesCS2A01G412000 chr2D 88.453 459 33 7 4477 4932 524045729 524045288 2.310000e-148 536.0
13 TraesCS2A01G412000 chr2D 90.217 276 18 7 2903 3170 524048949 524048675 8.990000e-93 351.0
14 TraesCS2A01G412000 chr2D 77.990 577 112 12 5075 5639 17170666 17171239 1.160000e-91 348.0
15 TraesCS2A01G412000 chr2D 91.051 257 20 3 2187 2441 524049199 524048944 1.500000e-90 344.0
16 TraesCS2A01G412000 chr2D 88.849 278 31 0 5362 5639 524040740 524040463 5.410000e-90 342.0
17 TraesCS2A01G412000 chr2D 94.964 139 6 1 4245 4383 619720673 619720536 3.420000e-52 217.0
18 TraesCS2A01G412000 chr2D 83.628 226 17 8 4039 4247 524046171 524045949 1.600000e-45 195.0
19 TraesCS2A01G412000 chr2D 92.754 69 5 0 4409 4477 524045896 524045828 3.590000e-17 100.0
20 TraesCS2A01G412000 chr2D 85.714 98 8 5 2446 2540 9792031 9791937 1.290000e-16 99.0
21 TraesCS2A01G412000 chr2D 82.955 88 15 0 4794 4881 147350216 147350303 4.680000e-11 80.5
22 TraesCS2A01G412000 chr2D 87.037 54 5 2 3328 3380 20185979 20186031 6.100000e-05 60.2
23 TraesCS2A01G412000 chr5B 82.382 613 92 10 5038 5636 70917814 70918424 2.330000e-143 520.0
24 TraesCS2A01G412000 chr5B 79.966 594 93 10 5033 5603 47329679 47329089 1.130000e-111 414.0
25 TraesCS2A01G412000 chr5B 91.892 148 12 0 4225 4372 123712319 123712172 2.060000e-49 207.0
26 TraesCS2A01G412000 chr7A 90.960 354 10 5 2441 2774 435974988 435974637 1.850000e-124 457.0
27 TraesCS2A01G412000 chr7A 95.420 131 5 1 2767 2896 435972954 435972824 2.060000e-49 207.0
28 TraesCS2A01G412000 chr7A 90.714 140 12 1 4233 4372 189327636 189327498 9.650000e-43 185.0
29 TraesCS2A01G412000 chr7A 100.000 29 0 0 4932 4960 308112727 308112699 3.000000e-03 54.7
30 TraesCS2A01G412000 chr4A 80.776 593 94 11 5032 5608 36803828 36804416 4.010000e-121 446.0
31 TraesCS2A01G412000 chr4A 78.090 534 102 15 5084 5610 26023497 26024022 1.960000e-84 324.0
32 TraesCS2A01G412000 chr4A 94.245 139 7 1 4242 4380 718614895 718614758 1.590000e-50 211.0
33 TraesCS2A01G412000 chr4A 91.781 146 11 1 4229 4373 722866754 722866899 9.580000e-48 202.0
34 TraesCS2A01G412000 chr4A 88.679 53 4 2 3328 3379 619148155 619148104 4.720000e-06 63.9
35 TraesCS2A01G412000 chr3D 80.717 586 102 9 5058 5639 515188656 515188078 4.010000e-121 446.0
36 TraesCS2A01G412000 chr3D 91.837 147 10 2 4243 4389 67064782 67064926 2.660000e-48 204.0
37 TraesCS2A01G412000 chr3D 89.362 141 14 1 4232 4372 345722859 345722720 5.810000e-40 176.0
38 TraesCS2A01G412000 chr5D 80.594 505 87 11 5114 5610 444478305 444477804 4.120000e-101 379.0
39 TraesCS2A01G412000 chr5D 88.000 150 16 2 4228 4375 361358728 361358579 5.810000e-40 176.0
40 TraesCS2A01G412000 chr1D 78.066 424 70 18 5085 5496 111061625 111062037 4.360000e-61 246.0
41 TraesCS2A01G412000 chr1D 96.923 130 3 1 4243 4372 17613564 17613692 3.420000e-52 217.0
42 TraesCS2A01G412000 chr1D 95.522 134 6 0 4242 4375 488630319 488630186 1.230000e-51 215.0
43 TraesCS2A01G412000 chr1D 89.726 146 13 1 4229 4372 8327223 8327368 9.650000e-43 185.0
44 TraesCS2A01G412000 chr1D 88.356 146 16 1 4228 4372 360385791 360385646 2.090000e-39 174.0
45 TraesCS2A01G412000 chr1D 87.209 86 11 0 4797 4882 479523219 479523134 1.290000e-16 99.0
46 TraesCS2A01G412000 chr1D 82.075 106 15 4 2441 2544 19141195 19141092 2.800000e-13 87.9
47 TraesCS2A01G412000 chr1D 96.154 52 2 0 3328 3379 423077158 423077107 1.010000e-12 86.1
48 TraesCS2A01G412000 chr1D 90.566 53 3 2 3328 3379 433250093 433250144 1.010000e-07 69.4
49 TraesCS2A01G412000 chr7B 92.414 145 10 1 4241 4384 639040508 639040364 7.410000e-49 206.0
50 TraesCS2A01G412000 chr7B 100.000 30 0 0 4932 4961 385671705 385671676 7.890000e-04 56.5
51 TraesCS2A01G412000 chr7D 90.076 131 13 0 4245 4375 454720969 454720839 2.700000e-38 171.0
52 TraesCS2A01G412000 chr7D 89.535 86 4 5 2437 2521 618163929 618164010 2.780000e-18 104.0
53 TraesCS2A01G412000 chr3A 81.053 190 32 4 5116 5303 12336547 12336734 1.270000e-31 148.0
54 TraesCS2A01G412000 chr6A 96.154 52 2 0 2440 2491 435598689 435598638 1.010000e-12 86.1
55 TraesCS2A01G412000 chr6A 79.845 129 12 10 2440 2562 551648286 551648166 1.300000e-11 82.4
56 TraesCS2A01G412000 chr6A 83.871 62 9 1 4932 4993 595651691 595651751 2.190000e-04 58.4
57 TraesCS2A01G412000 chr3B 94.545 55 2 1 2447 2500 817800438 817800384 3.620000e-12 84.2
58 TraesCS2A01G412000 chr6B 84.146 82 12 1 4932 5012 682635573 682635654 1.680000e-10 78.7
59 TraesCS2A01G412000 chr5A 90.566 53 2 3 3328 3379 663730806 663730856 3.650000e-07 67.6
60 TraesCS2A01G412000 chr1A 100.000 30 0 0 4932 4961 14936951 14936980 7.890000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G412000 chr2A 669631091 669636729 5638 True 10414.000000 10414 100.000000 1 5639 1 chr2A.!!$R2 5638
1 TraesCS2A01G412000 chr2A 18637484 18638014 530 False 422.000000 422 81.273000 5114 5639 1 chr2A.!!$F1 525
2 TraesCS2A01G412000 chr2B 619391771 619397587 5816 True 762.420000 2638 88.469800 7 4932 5 chr2B.!!$R2 4925
3 TraesCS2A01G412000 chr2D 524045288 524051329 6041 True 693.666667 2636 89.314667 7 4932 6 chr2D.!!$R4 4925
4 TraesCS2A01G412000 chr2D 17170666 17171239 573 False 348.000000 348 77.990000 5075 5639 1 chr2D.!!$F1 564
5 TraesCS2A01G412000 chr5B 70917814 70918424 610 False 520.000000 520 82.382000 5038 5636 1 chr5B.!!$F1 598
6 TraesCS2A01G412000 chr5B 47329089 47329679 590 True 414.000000 414 79.966000 5033 5603 1 chr5B.!!$R1 570
7 TraesCS2A01G412000 chr7A 435972824 435974988 2164 True 332.000000 457 93.190000 2441 2896 2 chr7A.!!$R3 455
8 TraesCS2A01G412000 chr4A 36803828 36804416 588 False 446.000000 446 80.776000 5032 5608 1 chr4A.!!$F2 576
9 TraesCS2A01G412000 chr4A 26023497 26024022 525 False 324.000000 324 78.090000 5084 5610 1 chr4A.!!$F1 526
10 TraesCS2A01G412000 chr3D 515188078 515188656 578 True 446.000000 446 80.717000 5058 5639 1 chr3D.!!$R2 581
11 TraesCS2A01G412000 chr5D 444477804 444478305 501 True 379.000000 379 80.594000 5114 5610 1 chr5D.!!$R2 496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
956 1003 0.038166 CACTTCTAGGGGCAAGGCAA 59.962 55.0 0.00 0.0 0.00 4.52 F
957 1004 0.038310 ACTTCTAGGGGCAAGGCAAC 59.962 55.0 0.00 0.0 0.00 4.17 F
1854 1964 0.237235 TTTCGTCAGCGTTTGATGCC 59.763 50.0 6.45 0.0 41.68 4.40 F
3200 5192 0.250901 ATTGTGTGCCTGGTCTCACC 60.251 55.0 15.55 0.0 39.22 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2514 2656 0.748005 GCTGGGCAATGGTCATACGT 60.748 55.0 0.00 0.00 0.00 3.57 R
2576 2738 1.066136 CAGATGTGTCAGTCGTGCTG 58.934 55.0 3.92 3.92 46.34 4.41 R
3319 5311 0.179045 ATCTCAACATGCCCCTACGC 60.179 55.0 0.00 0.00 0.00 4.42 R
4965 10815 0.037419 TACCCCCAAACGAACGTAGC 60.037 55.0 0.00 0.00 0.00 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 6.525629 AGCTAAAGAAGAAAAGTAGCAGACA 58.474 36.000 4.03 0.00 39.71 3.41
58 59 2.487762 CGGTGAATGTTATGGCTGTGTT 59.512 45.455 0.00 0.00 0.00 3.32
61 62 5.504010 CGGTGAATGTTATGGCTGTGTTATC 60.504 44.000 0.00 0.00 0.00 1.75
63 64 6.095440 GGTGAATGTTATGGCTGTGTTATCTT 59.905 38.462 0.00 0.00 0.00 2.40
67 68 9.722056 GAATGTTATGGCTGTGTTATCTTTTAG 57.278 33.333 0.00 0.00 0.00 1.85
74 82 7.601856 TGGCTGTGTTATCTTTTAGAAAATGG 58.398 34.615 0.00 0.00 0.00 3.16
87 95 1.134175 GAAAATGGTATGGGTGTGCCG 59.866 52.381 0.00 0.00 34.97 5.69
151 159 0.250338 ACTCTCGTCCAGTTTTGGCC 60.250 55.000 0.00 0.00 44.63 5.36
175 211 6.454318 CCACTCTGAAAATATTCGAGTTCGTG 60.454 42.308 1.07 0.00 42.26 4.35
193 229 2.005451 GTGGTAGTGCTGAAGCTGATG 58.995 52.381 3.61 0.00 42.66 3.07
289 329 1.067821 GATGAGAAGCCTAGTCACCCG 59.932 57.143 0.00 0.00 0.00 5.28
291 331 2.187163 GAAGCCTAGTCACCCGCC 59.813 66.667 0.00 0.00 0.00 6.13
295 335 2.768344 CCTAGTCACCCGCCCCAT 60.768 66.667 0.00 0.00 0.00 4.00
329 369 4.576463 CAGACAACCCAATCCATTAGCTAC 59.424 45.833 0.00 0.00 0.00 3.58
346 386 2.262637 CTACTTACCCAGGACCAACCA 58.737 52.381 0.00 0.00 42.04 3.67
347 387 1.064825 ACTTACCCAGGACCAACCAG 58.935 55.000 0.00 0.00 42.04 4.00
348 388 0.322546 CTTACCCAGGACCAACCAGC 60.323 60.000 0.00 0.00 42.04 4.85
350 390 1.488705 TACCCAGGACCAACCAGCAG 61.489 60.000 0.00 0.00 42.04 4.24
352 392 2.113774 CAGGACCAACCAGCAGCA 59.886 61.111 0.00 0.00 42.04 4.41
353 393 2.113986 AGGACCAACCAGCAGCAC 59.886 61.111 0.00 0.00 42.04 4.40
354 394 2.985847 GGACCAACCAGCAGCACC 60.986 66.667 0.00 0.00 38.79 5.01
355 395 2.203337 GACCAACCAGCAGCACCA 60.203 61.111 0.00 0.00 0.00 4.17
356 396 1.827789 GACCAACCAGCAGCACCAA 60.828 57.895 0.00 0.00 0.00 3.67
357 397 1.152483 ACCAACCAGCAGCACCAAT 60.152 52.632 0.00 0.00 0.00 3.16
358 398 1.181098 ACCAACCAGCAGCACCAATC 61.181 55.000 0.00 0.00 0.00 2.67
359 399 1.180456 CCAACCAGCAGCACCAATCA 61.180 55.000 0.00 0.00 0.00 2.57
360 400 0.038892 CAACCAGCAGCACCAATCAC 60.039 55.000 0.00 0.00 0.00 3.06
361 401 0.178981 AACCAGCAGCACCAATCACT 60.179 50.000 0.00 0.00 0.00 3.41
362 402 0.692476 ACCAGCAGCACCAATCACTA 59.308 50.000 0.00 0.00 0.00 2.74
363 403 1.089920 CCAGCAGCACCAATCACTAC 58.910 55.000 0.00 0.00 0.00 2.73
364 404 1.611410 CCAGCAGCACCAATCACTACA 60.611 52.381 0.00 0.00 0.00 2.74
365 405 2.362736 CAGCAGCACCAATCACTACAT 58.637 47.619 0.00 0.00 0.00 2.29
366 406 3.534554 CAGCAGCACCAATCACTACATA 58.465 45.455 0.00 0.00 0.00 2.29
367 407 3.558829 CAGCAGCACCAATCACTACATAG 59.441 47.826 0.00 0.00 0.00 2.23
368 408 3.452264 AGCAGCACCAATCACTACATAGA 59.548 43.478 0.00 0.00 0.00 1.98
369 409 4.102210 AGCAGCACCAATCACTACATAGAT 59.898 41.667 0.00 0.00 0.00 1.98
370 410 5.305386 AGCAGCACCAATCACTACATAGATA 59.695 40.000 0.00 0.00 0.00 1.98
371 411 6.013898 AGCAGCACCAATCACTACATAGATAT 60.014 38.462 0.00 0.00 0.00 1.63
372 412 7.179160 AGCAGCACCAATCACTACATAGATATA 59.821 37.037 0.00 0.00 0.00 0.86
373 413 7.984050 GCAGCACCAATCACTACATAGATATAT 59.016 37.037 0.00 0.00 0.00 0.86
374 414 9.310716 CAGCACCAATCACTACATAGATATATG 57.689 37.037 5.80 5.80 0.00 1.78
395 435 1.200252 TCTTCTCTTTCGAGAGTGCCG 59.800 52.381 2.53 0.00 46.36 5.69
415 455 1.263217 GTTTTACAGTGACACAGGCGG 59.737 52.381 8.59 0.00 0.00 6.13
440 480 4.441913 GCCATTCCATTTCCACCAGTAATG 60.442 45.833 0.00 0.00 0.00 1.90
454 494 5.995282 CACCAGTAATGAGTTACCACTTTCA 59.005 40.000 0.00 0.00 40.88 2.69
479 519 7.536281 CAGTCATGTTCACATAATTCAGTTGTG 59.464 37.037 0.00 0.00 41.60 3.33
653 694 3.248171 GCGATCGCGAGACCACAC 61.248 66.667 26.12 0.00 46.97 3.82
749 796 0.803117 GGCTAAAGACGAGGCCAAAC 59.197 55.000 5.01 0.00 43.59 2.93
765 812 2.231235 CCAAACCCACCACTATTCTTGC 59.769 50.000 0.00 0.00 0.00 4.01
822 869 1.338864 GCGGCTCCAGATCATCATCAT 60.339 52.381 0.00 0.00 0.00 2.45
919 966 0.740737 AGTTCACTGCACTGGTTTGC 59.259 50.000 0.00 0.00 43.31 3.68
952 999 0.107459 GGAGCACTTCTAGGGGCAAG 60.107 60.000 0.00 0.00 0.00 4.01
954 1001 1.750780 GCACTTCTAGGGGCAAGGC 60.751 63.158 0.00 0.00 0.00 4.35
955 1002 1.685224 CACTTCTAGGGGCAAGGCA 59.315 57.895 0.00 0.00 0.00 4.75
956 1003 0.038166 CACTTCTAGGGGCAAGGCAA 59.962 55.000 0.00 0.00 0.00 4.52
957 1004 0.038310 ACTTCTAGGGGCAAGGCAAC 59.962 55.000 0.00 0.00 0.00 4.17
958 1005 1.002624 TTCTAGGGGCAAGGCAACG 60.003 57.895 0.00 0.00 46.39 4.10
974 1026 3.374330 CGATCGCTGTTCGTGGTC 58.626 61.111 0.26 0.00 39.67 4.02
977 1029 1.078759 GATCGCTGTTCGTGGTCCTG 61.079 60.000 0.00 0.00 39.67 3.86
1062 1116 0.909610 TCCCCTGTAAGTGCCCTCAG 60.910 60.000 0.00 0.00 0.00 3.35
1076 1130 0.252742 CCTCAGGAACCACCCCTACT 60.253 60.000 0.00 0.00 40.05 2.57
1080 1134 1.007963 CAGGAACCACCCCTACTCCTA 59.992 57.143 0.00 0.00 40.05 2.94
1097 1153 1.222115 CTACCTAATTCAGCGGCGCC 61.222 60.000 30.40 19.07 0.00 6.53
1222 1294 1.270412 ACGTGGCGTTCAAGGTGAATA 60.270 47.619 0.00 0.00 38.79 1.75
1229 1301 4.156008 GGCGTTCAAGGTGAATAACTGAAT 59.844 41.667 0.00 0.00 38.79 2.57
1234 1306 6.381498 TCAAGGTGAATAACTGAATACCCA 57.619 37.500 0.00 0.00 0.00 4.51
1235 1307 6.969043 TCAAGGTGAATAACTGAATACCCAT 58.031 36.000 0.00 0.00 0.00 4.00
1237 1309 5.941788 AGGTGAATAACTGAATACCCATCC 58.058 41.667 0.00 0.00 0.00 3.51
1238 1310 5.672194 AGGTGAATAACTGAATACCCATCCT 59.328 40.000 0.00 0.00 0.00 3.24
1239 1311 5.998363 GGTGAATAACTGAATACCCATCCTC 59.002 44.000 0.00 0.00 0.00 3.71
1241 1313 6.708054 GTGAATAACTGAATACCCATCCTCTG 59.292 42.308 0.00 0.00 0.00 3.35
1242 1314 3.567478 AACTGAATACCCATCCTCTGC 57.433 47.619 0.00 0.00 0.00 4.26
1243 1315 2.769209 ACTGAATACCCATCCTCTGCT 58.231 47.619 0.00 0.00 0.00 4.24
1244 1316 3.928754 ACTGAATACCCATCCTCTGCTA 58.071 45.455 0.00 0.00 0.00 3.49
1252 1348 2.665165 CCATCCTCTGCTACTCTGTCT 58.335 52.381 0.00 0.00 0.00 3.41
1257 1353 0.609406 TCTGCTACTCTGTCTGCGGT 60.609 55.000 0.00 0.00 33.88 5.68
1285 1381 1.229368 TGGGAGGGTGACGGATTGA 60.229 57.895 0.00 0.00 0.00 2.57
1293 1389 1.737793 GGTGACGGATTGACATGGTTC 59.262 52.381 0.00 0.00 0.00 3.62
1409 1505 3.440415 GGTGCGGCCTGCTTAACC 61.440 66.667 18.14 13.98 46.63 2.85
1428 1524 0.302890 CGATTCATCGGCTTGTCTGC 59.697 55.000 0.98 0.00 45.93 4.26
1532 1634 2.165030 GGATCACCATTGCAAGGACAAG 59.835 50.000 13.66 0.00 35.97 3.16
1583 1685 1.767681 GGAGCCACCATGAGAGATCTT 59.232 52.381 0.00 0.00 38.79 2.40
1610 1712 3.750371 TGAACTGGTAGGTTCATTGTGG 58.250 45.455 6.03 0.00 46.91 4.17
1614 1716 3.081804 CTGGTAGGTTCATTGTGGTTCC 58.918 50.000 0.00 0.00 0.00 3.62
1626 1729 0.393537 GTGGTTCCATCTCCTGCTGG 60.394 60.000 2.58 2.58 0.00 4.85
1648 1751 4.505566 GGCTGATGGATGCCTCTGTTTATA 60.506 45.833 0.00 0.00 45.26 0.98
1655 1758 4.202182 GGATGCCTCTGTTTATACGGTACA 60.202 45.833 0.00 0.00 32.23 2.90
1662 1766 7.262772 CCTCTGTTTATACGGTACATTTCTCA 58.737 38.462 0.00 0.00 32.23 3.27
1713 1823 2.124860 GCGCCGGGTAGGTTGATT 60.125 61.111 2.18 0.00 43.70 2.57
1755 1865 4.399303 GTGGTTTACATTGCTGCTAATCCT 59.601 41.667 0.00 0.00 0.00 3.24
1791 1901 1.760480 GGAGGCAGAGGAGGAGGAC 60.760 68.421 0.00 0.00 0.00 3.85
1854 1964 0.237235 TTTCGTCAGCGTTTGATGCC 59.763 50.000 6.45 0.00 41.68 4.40
1857 1967 1.154413 GTCAGCGTTTGATGCCGTG 60.154 57.895 0.00 0.00 38.29 4.94
2001 2111 9.088987 ACTTTCATGTACCAAGGTAATTCATTT 57.911 29.630 0.00 0.00 31.86 2.32
2006 2116 5.949354 TGTACCAAGGTAATTCATTTCCCAG 59.051 40.000 0.00 0.00 31.86 4.45
2007 2117 5.010708 ACCAAGGTAATTCATTTCCCAGT 57.989 39.130 0.00 0.00 0.00 4.00
2008 2118 5.016831 ACCAAGGTAATTCATTTCCCAGTC 58.983 41.667 0.00 0.00 0.00 3.51
2009 2119 5.016173 CCAAGGTAATTCATTTCCCAGTCA 58.984 41.667 0.00 0.00 0.00 3.41
2083 2193 8.864087 TCATGCAGTTCTACATATATCTGAACT 58.136 33.333 14.09 14.09 45.31 3.01
2087 2197 9.138062 GCAGTTCTACATATATCTGAACTCATG 57.862 37.037 15.79 10.56 43.43 3.07
2088 2198 9.636879 CAGTTCTACATATATCTGAACTCATGG 57.363 37.037 15.79 6.91 43.43 3.66
2089 2199 8.310382 AGTTCTACATATATCTGAACTCATGGC 58.690 37.037 14.09 0.00 42.16 4.40
2090 2200 7.175347 TCTACATATATCTGAACTCATGGCC 57.825 40.000 0.00 0.00 0.00 5.36
2091 2201 5.830799 ACATATATCTGAACTCATGGCCA 57.169 39.130 8.56 8.56 0.00 5.36
2092 2202 6.191657 ACATATATCTGAACTCATGGCCAA 57.808 37.500 10.96 0.00 0.00 4.52
2123 2263 8.722480 TCTGAACACATAGATCGAATTCATTT 57.278 30.769 6.22 0.00 0.00 2.32
2241 2383 1.527370 GGGTGCCTCTGTGGTATCC 59.473 63.158 0.30 0.30 44.44 2.59
2243 2385 0.839946 GGTGCCTCTGTGGTATCCAT 59.160 55.000 0.00 0.00 35.28 3.41
2361 2503 8.553153 TCCTTAGATGGTGTTCAATTATGGTAA 58.447 33.333 0.00 0.00 0.00 2.85
2399 2541 6.992063 AATCTCAGTGTAACATCCAACATC 57.008 37.500 0.00 0.00 41.43 3.06
2446 2588 6.377429 TCTCCTTATATTCATAGTAGCACCGG 59.623 42.308 0.00 0.00 0.00 5.28
2532 2674 2.613026 TACGTATGACCATTGCCCAG 57.387 50.000 0.00 0.00 0.00 4.45
2560 2722 1.228124 CCCAAACGCCAGAGTCCAA 60.228 57.895 0.00 0.00 0.00 3.53
2576 2738 2.099756 GTCCAATTGCCACCAATAGAGC 59.900 50.000 0.00 0.00 40.69 4.09
2582 2744 1.709147 GCCACCAATAGAGCAGCACG 61.709 60.000 0.00 0.00 0.00 5.34
2712 2874 3.768633 CTGGGGCAACTACAGCTAG 57.231 57.895 0.00 0.00 35.44 3.42
2736 2898 2.099098 GGAGCTGAGCTAGAGTCAACTC 59.901 54.545 7.08 13.67 39.88 3.01
2833 4685 3.691498 CGATCCGGCAGGTTAAAATTTC 58.309 45.455 1.81 0.00 39.05 2.17
2896 4749 0.970640 TGTTTGTAGCTCGGCCACTA 59.029 50.000 2.24 0.00 0.00 2.74
2897 4750 1.337447 TGTTTGTAGCTCGGCCACTAC 60.337 52.381 16.85 16.85 39.38 2.73
2898 4751 0.970640 TTTGTAGCTCGGCCACTACA 59.029 50.000 20.66 20.66 45.25 2.74
2899 4752 1.191535 TTGTAGCTCGGCCACTACAT 58.808 50.000 23.53 0.14 45.95 2.29
2900 4753 2.061509 TGTAGCTCGGCCACTACATA 57.938 50.000 20.66 5.26 42.82 2.29
2901 4754 1.954382 TGTAGCTCGGCCACTACATAG 59.046 52.381 20.66 1.29 42.82 2.23
2902 4755 1.955080 GTAGCTCGGCCACTACATAGT 59.045 52.381 18.17 0.00 38.88 2.12
2903 4756 2.359981 AGCTCGGCCACTACATAGTA 57.640 50.000 2.24 0.00 34.13 1.82
2904 4757 2.231529 AGCTCGGCCACTACATAGTAG 58.768 52.381 2.24 2.79 34.13 2.57
2905 4758 1.955080 GCTCGGCCACTACATAGTAGT 59.045 52.381 2.24 4.09 34.13 2.73
2906 4759 3.144506 GCTCGGCCACTACATAGTAGTA 58.855 50.000 2.24 0.00 34.13 1.82
2922 4780 7.604164 ACATAGTAGTAGTATGCATGCAAATCC 59.396 37.037 26.68 12.45 35.43 3.01
2924 4782 3.141398 AGTAGTATGCATGCAAATCCGG 58.859 45.455 26.68 0.00 0.00 5.14
2927 4785 2.878406 AGTATGCATGCAAATCCGGTAC 59.122 45.455 26.68 19.44 0.00 3.34
2995 4854 7.124599 TGTTGGAATGAATATGATTTGCTCCTT 59.875 33.333 0.00 0.00 0.00 3.36
3046 4905 8.750515 TGATAGAAAATTATGTGAATGCCTCA 57.249 30.769 0.00 0.00 0.00 3.86
3119 4980 9.220767 GACCTCTCAACTATTAGTCATGTTTTT 57.779 33.333 0.00 0.00 0.00 1.94
3120 4981 9.220767 ACCTCTCAACTATTAGTCATGTTTTTC 57.779 33.333 0.00 0.00 0.00 2.29
3142 5003 6.240549 TCTTTTGGCCCATGAAGTTTAAAA 57.759 33.333 0.00 0.00 0.00 1.52
3146 5007 3.711704 TGGCCCATGAAGTTTAAAACCAA 59.288 39.130 0.00 0.00 0.00 3.67
3178 5170 6.055588 TGGCAGTTAGCTCCTAATATTGAAC 58.944 40.000 0.00 0.00 44.79 3.18
3188 5180 8.246180 AGCTCCTAATATTGAACAAATTGTGTG 58.754 33.333 0.00 0.00 40.60 3.82
3198 5190 1.955778 CAAATTGTGTGCCTGGTCTCA 59.044 47.619 0.00 0.00 0.00 3.27
3200 5192 0.250901 ATTGTGTGCCTGGTCTCACC 60.251 55.000 15.55 0.00 39.22 4.02
3208 5200 0.321122 CCTGGTCTCACCTGAAGCAC 60.321 60.000 1.33 0.00 39.29 4.40
3219 5211 1.679680 CCTGAAGCACTATGGCCAATG 59.320 52.381 10.96 10.35 0.00 2.82
3220 5212 1.066605 CTGAAGCACTATGGCCAATGC 59.933 52.381 25.07 25.07 38.39 3.56
3261 5253 3.578456 CGAAGCCACCATGTCCAC 58.422 61.111 0.00 0.00 0.00 4.02
3262 5254 1.302431 CGAAGCCACCATGTCCACA 60.302 57.895 0.00 0.00 0.00 4.17
3263 5255 1.577328 CGAAGCCACCATGTCCACAC 61.577 60.000 0.00 0.00 0.00 3.82
3264 5256 0.250901 GAAGCCACCATGTCCACACT 60.251 55.000 0.00 0.00 0.00 3.55
3265 5257 0.538057 AAGCCACCATGTCCACACTG 60.538 55.000 0.00 0.00 0.00 3.66
3266 5258 1.973281 GCCACCATGTCCACACTGG 60.973 63.158 0.00 6.62 39.43 4.00
3267 5259 1.760527 CCACCATGTCCACACTGGA 59.239 57.895 12.43 0.00 45.98 3.86
3279 5271 5.055265 TCCACACTGGAGTTTTTAATGGA 57.945 39.130 0.00 0.00 42.67 3.41
3285 5277 7.925483 CACACTGGAGTTTTTAATGGATTTTCA 59.075 33.333 0.00 0.00 0.00 2.69
3320 5312 5.582689 AAGGAATAATTTGCTAGTGGTGC 57.417 39.130 0.00 0.00 31.50 5.01
3321 5313 3.627577 AGGAATAATTTGCTAGTGGTGCG 59.372 43.478 0.00 0.00 30.86 5.34
3322 5314 3.377172 GGAATAATTTGCTAGTGGTGCGT 59.623 43.478 0.00 0.00 0.00 5.24
3324 5316 5.277345 GGAATAATTTGCTAGTGGTGCGTAG 60.277 44.000 0.00 0.00 0.00 3.51
3326 5318 0.036765 TTTGCTAGTGGTGCGTAGGG 60.037 55.000 0.00 0.00 0.00 3.53
3327 5319 1.895020 TTGCTAGTGGTGCGTAGGGG 61.895 60.000 0.00 0.00 0.00 4.79
3328 5320 2.499685 CTAGTGGTGCGTAGGGGC 59.500 66.667 0.00 0.00 0.00 5.80
3329 5321 2.284039 TAGTGGTGCGTAGGGGCA 60.284 61.111 0.00 0.00 41.45 5.36
3330 5322 1.686325 CTAGTGGTGCGTAGGGGCAT 61.686 60.000 0.00 0.00 45.99 4.40
3332 5324 3.326578 TGGTGCGTAGGGGCATGT 61.327 61.111 0.00 0.00 45.99 3.21
3333 5325 2.045340 GGTGCGTAGGGGCATGTT 60.045 61.111 0.00 0.00 45.99 2.71
3334 5326 2.406616 GGTGCGTAGGGGCATGTTG 61.407 63.158 0.00 0.00 45.99 3.33
3335 5327 1.376683 GTGCGTAGGGGCATGTTGA 60.377 57.895 0.00 0.00 45.99 3.18
3336 5328 1.078497 TGCGTAGGGGCATGTTGAG 60.078 57.895 0.00 0.00 38.17 3.02
3337 5329 1.220749 GCGTAGGGGCATGTTGAGA 59.779 57.895 0.00 0.00 0.00 3.27
3338 5330 0.179045 GCGTAGGGGCATGTTGAGAT 60.179 55.000 0.00 0.00 0.00 2.75
3339 5331 1.070134 GCGTAGGGGCATGTTGAGATA 59.930 52.381 0.00 0.00 0.00 1.98
3340 5332 2.484770 GCGTAGGGGCATGTTGAGATAA 60.485 50.000 0.00 0.00 0.00 1.75
3341 5333 3.804036 CGTAGGGGCATGTTGAGATAAA 58.196 45.455 0.00 0.00 0.00 1.40
3345 5337 6.092670 CGTAGGGGCATGTTGAGATAAATATG 59.907 42.308 0.00 0.00 33.25 1.78
3347 5339 6.797707 AGGGGCATGTTGAGATAAATATGAT 58.202 36.000 0.00 0.00 32.16 2.45
3349 5341 8.051535 AGGGGCATGTTGAGATAAATATGATAG 58.948 37.037 0.00 0.00 32.16 2.08
3351 5343 8.671921 GGGCATGTTGAGATAAATATGATAGTG 58.328 37.037 0.00 0.00 32.16 2.74
3352 5344 8.671921 GGCATGTTGAGATAAATATGATAGTGG 58.328 37.037 0.00 0.00 32.16 4.00
3353 5345 8.671921 GCATGTTGAGATAAATATGATAGTGGG 58.328 37.037 0.00 0.00 32.16 4.61
3354 5346 9.170734 CATGTTGAGATAAATATGATAGTGGGG 57.829 37.037 0.00 0.00 32.16 4.96
3356 5348 9.116080 TGTTGAGATAAATATGATAGTGGGGAT 57.884 33.333 0.00 0.00 0.00 3.85
3357 5349 9.388506 GTTGAGATAAATATGATAGTGGGGATG 57.611 37.037 0.00 0.00 0.00 3.51
3359 5351 8.762645 TGAGATAAATATGATAGTGGGGATGAC 58.237 37.037 0.00 0.00 0.00 3.06
3360 5352 8.923838 AGATAAATATGATAGTGGGGATGACT 57.076 34.615 0.00 0.00 0.00 3.41
3361 5353 8.986991 AGATAAATATGATAGTGGGGATGACTC 58.013 37.037 0.00 0.00 0.00 3.36
3362 5354 8.923838 ATAAATATGATAGTGGGGATGACTCT 57.076 34.615 0.00 0.00 0.00 3.24
3363 5355 6.865834 AATATGATAGTGGGGATGACTCTC 57.134 41.667 0.00 0.00 0.00 3.20
3364 5356 3.981516 TGATAGTGGGGATGACTCTCT 57.018 47.619 0.00 0.00 0.00 3.10
3365 5357 4.271807 TGATAGTGGGGATGACTCTCTT 57.728 45.455 0.00 0.00 0.00 2.85
3366 5358 5.403558 TGATAGTGGGGATGACTCTCTTA 57.596 43.478 0.00 0.00 0.00 2.10
3367 5359 5.389520 TGATAGTGGGGATGACTCTCTTAG 58.610 45.833 0.00 0.00 0.00 2.18
3368 5360 3.039252 AGTGGGGATGACTCTCTTAGG 57.961 52.381 0.00 0.00 0.00 2.69
3369 5361 2.316372 AGTGGGGATGACTCTCTTAGGT 59.684 50.000 0.00 0.00 0.00 3.08
3370 5362 3.532232 AGTGGGGATGACTCTCTTAGGTA 59.468 47.826 0.00 0.00 0.00 3.08
3371 5363 4.171044 AGTGGGGATGACTCTCTTAGGTAT 59.829 45.833 0.00 0.00 0.00 2.73
3372 5364 4.282195 GTGGGGATGACTCTCTTAGGTATG 59.718 50.000 0.00 0.00 0.00 2.39
3373 5365 4.078571 TGGGGATGACTCTCTTAGGTATGT 60.079 45.833 0.00 0.00 0.00 2.29
3374 5366 5.135533 TGGGGATGACTCTCTTAGGTATGTA 59.864 44.000 0.00 0.00 0.00 2.29
3375 5367 5.712917 GGGGATGACTCTCTTAGGTATGTAG 59.287 48.000 0.00 0.00 0.00 2.74
3376 5368 5.712917 GGGATGACTCTCTTAGGTATGTAGG 59.287 48.000 0.00 0.00 0.00 3.18
3377 5369 6.467484 GGGATGACTCTCTTAGGTATGTAGGA 60.467 46.154 0.00 0.00 0.00 2.94
3378 5370 7.179269 GGATGACTCTCTTAGGTATGTAGGAT 58.821 42.308 0.00 0.00 0.00 3.24
3379 5371 7.672239 GGATGACTCTCTTAGGTATGTAGGATT 59.328 40.741 0.00 0.00 0.00 3.01
3380 5372 9.742144 GATGACTCTCTTAGGTATGTAGGATTA 57.258 37.037 0.00 0.00 0.00 1.75
3382 5374 9.931698 TGACTCTCTTAGGTATGTAGGATTAAA 57.068 33.333 0.00 0.00 0.00 1.52
3440 5432 8.469309 AATCCATACATATTCAAAGGAACCAG 57.531 34.615 0.00 0.00 35.46 4.00
3441 5433 7.206789 TCCATACATATTCAAAGGAACCAGA 57.793 36.000 0.00 0.00 35.46 3.86
3443 5435 8.944138 TCCATACATATTCAAAGGAACCAGATA 58.056 33.333 0.00 0.00 35.46 1.98
3448 5440 8.840321 ACATATTCAAAGGAACCAGATAATTCG 58.160 33.333 0.00 0.00 35.46 3.34
3449 5441 8.840321 CATATTCAAAGGAACCAGATAATTCGT 58.160 33.333 0.00 0.00 35.46 3.85
3450 5442 6.494893 TTCAAAGGAACCAGATAATTCGTG 57.505 37.500 0.00 0.00 0.00 4.35
3467 5459 9.849166 ATAATTCGTGAAAAATGTTTATTCGGT 57.151 25.926 0.00 0.00 0.00 4.69
3481 5473 8.678593 TGTTTATTCGGTATATATTGCCACAA 57.321 30.769 0.00 0.00 0.00 3.33
3486 5478 5.250200 TCGGTATATATTGCCACAATTCCC 58.750 41.667 0.00 0.00 0.00 3.97
3487 5479 5.007034 CGGTATATATTGCCACAATTCCCA 58.993 41.667 0.00 0.00 0.00 4.37
3488 5480 5.106317 CGGTATATATTGCCACAATTCCCAC 60.106 44.000 0.00 0.00 0.00 4.61
3489 5481 6.010219 GGTATATATTGCCACAATTCCCACT 58.990 40.000 0.00 0.00 0.00 4.00
3493 5485 3.467374 TTGCCACAATTCCCACTTTTC 57.533 42.857 0.00 0.00 0.00 2.29
3495 5487 3.037549 TGCCACAATTCCCACTTTTCTT 58.962 40.909 0.00 0.00 0.00 2.52
3510 5502 8.031277 CCCACTTTTCTTCATAATTCTTTCCTG 58.969 37.037 0.00 0.00 0.00 3.86
3558 5590 9.490379 TTTCCAGAGTAATACTTGAGTTTCTTC 57.510 33.333 0.00 0.00 0.00 2.87
3560 5592 8.871125 TCCAGAGTAATACTTGAGTTTCTTCTT 58.129 33.333 0.00 0.00 0.00 2.52
3561 5593 9.145865 CCAGAGTAATACTTGAGTTTCTTCTTC 57.854 37.037 0.00 0.00 0.00 2.87
3562 5594 9.921637 CAGAGTAATACTTGAGTTTCTTCTTCT 57.078 33.333 0.00 0.00 0.00 2.85
3678 5712 7.425224 TTTCTTCCCCTTTTCACATGTTTTA 57.575 32.000 0.00 0.00 0.00 1.52
3684 5718 7.466804 TCCCCTTTTCACATGTTTTATACTCT 58.533 34.615 0.00 0.00 0.00 3.24
3692 5726 7.500992 TCACATGTTTTATACTCTCTCCATCC 58.499 38.462 0.00 0.00 0.00 3.51
3704 5738 3.134458 CTCTCCATCCCGATTTGTAAGC 58.866 50.000 0.00 0.00 0.00 3.09
3709 5743 3.107447 CCGATTTGTAAGCCGGGC 58.893 61.111 12.11 12.11 38.42 6.13
3713 5747 0.885196 GATTTGTAAGCCGGGCACAA 59.115 50.000 23.09 20.14 0.00 3.33
3715 5749 1.333177 TTTGTAAGCCGGGCACAAAT 58.667 45.000 25.26 9.28 37.27 2.32
3716 5750 1.333177 TTGTAAGCCGGGCACAAATT 58.667 45.000 23.09 8.78 0.00 1.82
3717 5751 1.333177 TGTAAGCCGGGCACAAATTT 58.667 45.000 23.09 8.00 0.00 1.82
3718 5752 1.689273 TGTAAGCCGGGCACAAATTTT 59.311 42.857 23.09 7.23 0.00 1.82
3719 5753 2.103263 TGTAAGCCGGGCACAAATTTTT 59.897 40.909 23.09 6.45 0.00 1.94
3720 5754 3.321111 TGTAAGCCGGGCACAAATTTTTA 59.679 39.130 23.09 5.39 0.00 1.52
3728 5762 5.336372 CCGGGCACAAATTTTTAGATCTTCA 60.336 40.000 0.00 0.00 0.00 3.02
3743 5777 9.507329 TTTAGATCTTCAACTTGACTAGCAAAT 57.493 29.630 0.00 0.00 35.74 2.32
3746 5780 6.545504 TCTTCAACTTGACTAGCAAATCAC 57.454 37.500 0.00 0.00 35.74 3.06
3752 5786 5.294356 ACTTGACTAGCAAATCACGTGTAA 58.706 37.500 16.51 0.00 35.74 2.41
3759 5793 2.351253 GCAAATCACGTGTAACATGCCA 60.351 45.455 16.51 0.00 35.74 4.92
3760 5794 3.673052 GCAAATCACGTGTAACATGCCAT 60.673 43.478 16.51 0.00 35.74 4.40
3761 5795 4.438065 GCAAATCACGTGTAACATGCCATA 60.438 41.667 16.51 0.00 35.74 2.74
3762 5796 4.875544 AATCACGTGTAACATGCCATAC 57.124 40.909 16.51 0.00 35.74 2.39
3800 5835 3.868757 AGTTCATTCGACGGAGAATCA 57.131 42.857 4.90 0.00 38.66 2.57
3836 5871 4.991153 TGCGGCCAATAACATATTTTGA 57.009 36.364 2.24 0.00 0.00 2.69
3839 5874 6.442952 TGCGGCCAATAACATATTTTGATAC 58.557 36.000 2.24 0.00 0.00 2.24
3841 5876 6.801862 GCGGCCAATAACATATTTTGATACTC 59.198 38.462 2.24 0.00 0.00 2.59
3895 5933 3.956848 ACAACCCGGATAGAGGTAGTAAC 59.043 47.826 0.73 0.00 34.45 2.50
3896 5934 3.956199 CAACCCGGATAGAGGTAGTAACA 59.044 47.826 0.73 0.00 34.45 2.41
3897 5935 4.255510 ACCCGGATAGAGGTAGTAACAA 57.744 45.455 0.73 0.00 33.52 2.83
3898 5936 4.812653 ACCCGGATAGAGGTAGTAACAAT 58.187 43.478 0.73 0.00 33.52 2.71
3901 5939 7.702785 ACCCGGATAGAGGTAGTAACAATATA 58.297 38.462 0.73 0.00 33.52 0.86
3903 5941 9.857656 CCCGGATAGAGGTAGTAACAATATATA 57.142 37.037 0.73 0.00 0.00 0.86
4010 7676 8.611051 AGGTATTGAAAGATAAGTACCAGACT 57.389 34.615 0.00 0.00 41.56 3.24
4023 7689 6.877611 AGTACCAGACTTAACCAATTGTTG 57.122 37.500 4.43 0.00 37.83 3.33
4024 7690 6.362248 AGTACCAGACTTAACCAATTGTTGT 58.638 36.000 4.43 0.00 37.83 3.32
4025 7691 6.831868 AGTACCAGACTTAACCAATTGTTGTT 59.168 34.615 4.43 5.10 37.83 2.83
4026 7692 6.538945 ACCAGACTTAACCAATTGTTGTTT 57.461 33.333 4.43 0.00 37.83 2.83
4027 7693 6.941857 ACCAGACTTAACCAATTGTTGTTTT 58.058 32.000 4.43 0.00 37.83 2.43
4028 7694 7.390823 ACCAGACTTAACCAATTGTTGTTTTT 58.609 30.769 4.43 0.00 37.83 1.94
4157 7838 8.352942 GTGACAATCCAGTAAGACTTTCAAAAT 58.647 33.333 0.00 0.00 0.00 1.82
4177 7858 8.694540 TCAAAATTATACACCTTTGATGGATGG 58.305 33.333 0.00 0.00 33.90 3.51
4208 7889 3.624777 CAGCATTTGGTGATAACTCCCT 58.375 45.455 3.72 0.00 45.66 4.20
4210 7891 3.266772 AGCATTTGGTGATAACTCCCTCA 59.733 43.478 0.00 0.00 0.00 3.86
4212 7893 4.096984 GCATTTGGTGATAACTCCCTCAAG 59.903 45.833 0.00 0.00 0.00 3.02
4241 7922 8.512966 AAAGAGATAAGGATTAAGGAGCAAAC 57.487 34.615 0.00 0.00 32.17 2.93
4242 7923 7.444703 AGAGATAAGGATTAAGGAGCAAACT 57.555 36.000 0.00 0.00 32.17 2.66
4243 7924 8.554490 AGAGATAAGGATTAAGGAGCAAACTA 57.446 34.615 0.00 0.00 32.17 2.24
4244 7925 8.646900 AGAGATAAGGATTAAGGAGCAAACTAG 58.353 37.037 0.00 0.00 32.17 2.57
4245 7926 8.325477 AGATAAGGATTAAGGAGCAAACTAGT 57.675 34.615 0.00 0.00 32.17 2.57
4246 7927 9.435570 AGATAAGGATTAAGGAGCAAACTAGTA 57.564 33.333 0.00 0.00 32.17 1.82
4247 7928 9.478768 GATAAGGATTAAGGAGCAAACTAGTAC 57.521 37.037 0.00 0.00 32.17 2.73
4248 7929 7.497773 AAGGATTAAGGAGCAAACTAGTACT 57.502 36.000 0.00 0.00 0.00 2.73
4249 7930 7.114866 AGGATTAAGGAGCAAACTAGTACTC 57.885 40.000 0.00 3.87 0.00 2.59
4253 7934 3.804786 GGAGCAAACTAGTACTCCCTC 57.195 52.381 21.06 11.91 42.44 4.30
4254 7935 2.431419 GGAGCAAACTAGTACTCCCTCC 59.569 54.545 21.06 15.71 42.44 4.30
4255 7936 2.099427 GAGCAAACTAGTACTCCCTCCG 59.901 54.545 0.00 0.00 0.00 4.63
4257 7938 1.136500 CAAACTAGTACTCCCTCCGCC 59.864 57.143 0.00 0.00 0.00 6.13
4259 7940 1.897615 CTAGTACTCCCTCCGCCCG 60.898 68.421 0.00 0.00 0.00 6.13
4260 7941 3.426309 TAGTACTCCCTCCGCCCGG 62.426 68.421 0.00 0.00 0.00 5.73
4261 7942 4.828296 GTACTCCCTCCGCCCGGA 62.828 72.222 0.73 9.31 42.90 5.14
4263 7944 3.605412 TACTCCCTCCGCCCGGAAA 62.605 63.158 0.73 0.00 44.66 3.13
4264 7945 2.884179 TACTCCCTCCGCCCGGAAAT 62.884 60.000 0.73 0.00 44.66 2.17
4265 7946 2.041715 TCCCTCCGCCCGGAAATA 60.042 61.111 0.73 0.00 44.66 1.40
4266 7947 2.110420 CCCTCCGCCCGGAAATAC 59.890 66.667 0.73 0.00 44.66 1.89
4267 7948 2.440817 CCCTCCGCCCGGAAATACT 61.441 63.158 0.73 0.00 44.66 2.12
4268 7949 1.525442 CCTCCGCCCGGAAATACTT 59.475 57.895 0.73 0.00 44.66 2.24
4269 7950 0.814010 CCTCCGCCCGGAAATACTTG 60.814 60.000 0.73 0.00 44.66 3.16
4270 7951 0.107848 CTCCGCCCGGAAATACTTGT 60.108 55.000 0.73 0.00 44.66 3.16
4272 7953 0.391927 CCGCCCGGAAATACTTGTCA 60.392 55.000 0.73 0.00 37.50 3.58
4273 7954 1.663695 CGCCCGGAAATACTTGTCAT 58.336 50.000 0.73 0.00 0.00 3.06
4274 7955 1.597663 CGCCCGGAAATACTTGTCATC 59.402 52.381 0.73 0.00 0.00 2.92
4275 7956 2.639065 GCCCGGAAATACTTGTCATCA 58.361 47.619 0.73 0.00 0.00 3.07
4276 7957 3.013921 GCCCGGAAATACTTGTCATCAA 58.986 45.455 0.73 0.00 0.00 2.57
4277 7958 3.442273 GCCCGGAAATACTTGTCATCAAA 59.558 43.478 0.73 0.00 32.87 2.69
4278 7959 4.082463 GCCCGGAAATACTTGTCATCAAAA 60.082 41.667 0.73 0.00 32.87 2.44
4279 7960 5.394115 GCCCGGAAATACTTGTCATCAAAAT 60.394 40.000 0.73 0.00 32.87 1.82
4280 7961 6.035843 CCCGGAAATACTTGTCATCAAAATG 58.964 40.000 0.73 0.00 32.87 2.32
4281 7962 6.127758 CCCGGAAATACTTGTCATCAAAATGA 60.128 38.462 0.73 0.00 39.63 2.57
4283 7964 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
4361 8042 8.020819 TCATTTTGATGACAAGTATTTTCGGAC 58.979 33.333 0.00 0.00 37.32 4.79
4363 8044 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
4365 8046 3.992643 TGACAAGTATTTTCGGACGGAA 58.007 40.909 0.00 0.00 0.00 4.30
4366 8047 3.991773 TGACAAGTATTTTCGGACGGAAG 59.008 43.478 0.00 0.00 35.70 3.46
4367 8048 3.332034 ACAAGTATTTTCGGACGGAAGG 58.668 45.455 0.00 0.00 35.70 3.46
4436 8670 6.463995 GGCACCTTTGTCCATTGAAATATA 57.536 37.500 0.00 0.00 0.00 0.86
4526 10368 2.175499 TCATCCTGGCCTTATTTCAGGG 59.825 50.000 3.32 0.00 45.89 4.45
4640 10482 7.144722 TGATGAAGCACATAAAGGTTTAGTG 57.855 36.000 0.00 0.00 39.56 2.74
4642 10484 7.611467 TGATGAAGCACATAAAGGTTTAGTGAT 59.389 33.333 12.42 6.62 39.56 3.06
4643 10485 7.144722 TGAAGCACATAAAGGTTTAGTGATG 57.855 36.000 12.42 1.03 32.14 3.07
4668 10518 1.374631 CTGCAACACAGGCGCTAGA 60.375 57.895 7.64 0.00 43.19 2.43
4685 10535 4.439700 CGCTAGAACTAGAAACGGATCCAA 60.440 45.833 13.41 0.00 35.21 3.53
4688 10538 6.018669 GCTAGAACTAGAAACGGATCCAATTG 60.019 42.308 13.41 0.00 35.21 2.32
4692 10542 3.575965 AGAAACGGATCCAATTGTTGC 57.424 42.857 13.41 6.34 0.00 4.17
4701 10551 5.291614 CGGATCCAATTGTTGCCAATTTTAG 59.708 40.000 13.41 0.00 46.61 1.85
4708 10558 7.707893 CCAATTGTTGCCAATTTTAGATAGGAG 59.292 37.037 4.43 0.00 46.61 3.69
4798 10648 7.429636 TTTGTAGGAGTTTCGGAATTACTTG 57.570 36.000 0.00 0.00 0.00 3.16
4800 10650 6.527423 TGTAGGAGTTTCGGAATTACTTGTT 58.473 36.000 0.00 0.00 0.00 2.83
4808 10658 5.356882 TCGGAATTACTTGTTGCTCAAAG 57.643 39.130 0.00 0.00 35.48 2.77
4823 10673 5.118990 TGCTCAAAGGAATGTATCTAGCAC 58.881 41.667 0.00 0.00 32.88 4.40
4886 10736 5.796424 TTCGGACAGAGGTAGTACTTTTT 57.204 39.130 0.00 0.00 0.00 1.94
4932 10782 4.279420 TCCATGATCGACCTTGTCTATCAG 59.721 45.833 14.25 8.38 44.04 2.90
4933 10783 4.554292 CATGATCGACCTTGTCTATCAGG 58.446 47.826 14.25 11.39 44.04 3.86
4934 10784 2.362397 TGATCGACCTTGTCTATCAGGC 59.638 50.000 7.19 0.00 38.96 4.85
4935 10785 1.112113 TCGACCTTGTCTATCAGGCC 58.888 55.000 0.00 0.00 0.00 5.19
4936 10786 0.824109 CGACCTTGTCTATCAGGCCA 59.176 55.000 5.01 0.00 0.00 5.36
4937 10787 1.207089 CGACCTTGTCTATCAGGCCAA 59.793 52.381 5.01 0.00 0.00 4.52
4938 10788 2.633488 GACCTTGTCTATCAGGCCAAC 58.367 52.381 5.01 0.00 0.00 3.77
4939 10789 2.237392 GACCTTGTCTATCAGGCCAACT 59.763 50.000 5.01 0.00 0.00 3.16
4940 10790 2.644798 ACCTTGTCTATCAGGCCAACTT 59.355 45.455 5.01 0.00 0.00 2.66
4941 10791 3.274288 CCTTGTCTATCAGGCCAACTTC 58.726 50.000 5.01 0.00 0.00 3.01
4942 10792 3.307691 CCTTGTCTATCAGGCCAACTTCA 60.308 47.826 5.01 0.00 0.00 3.02
4943 10793 4.326826 CTTGTCTATCAGGCCAACTTCAA 58.673 43.478 5.01 0.63 0.00 2.69
4944 10794 3.674997 TGTCTATCAGGCCAACTTCAAC 58.325 45.455 5.01 0.00 0.00 3.18
4945 10795 2.673368 GTCTATCAGGCCAACTTCAACG 59.327 50.000 5.01 0.00 0.00 4.10
4946 10796 1.398390 CTATCAGGCCAACTTCAACGC 59.602 52.381 5.01 0.00 0.00 4.84
4947 10797 0.537143 ATCAGGCCAACTTCAACGCA 60.537 50.000 5.01 0.00 0.00 5.24
4948 10798 1.008538 CAGGCCAACTTCAACGCAC 60.009 57.895 5.01 0.00 0.00 5.34
4949 10799 2.051345 GGCCAACTTCAACGCACG 60.051 61.111 0.00 0.00 0.00 5.34
4950 10800 2.539338 GGCCAACTTCAACGCACGA 61.539 57.895 0.00 0.00 0.00 4.35
4951 10801 1.368850 GCCAACTTCAACGCACGAC 60.369 57.895 0.00 0.00 0.00 4.34
4952 10802 1.278637 CCAACTTCAACGCACGACC 59.721 57.895 0.00 0.00 0.00 4.79
4953 10803 1.278637 CAACTTCAACGCACGACCC 59.721 57.895 0.00 0.00 0.00 4.46
4954 10804 1.890510 AACTTCAACGCACGACCCC 60.891 57.895 0.00 0.00 0.00 4.95
4955 10805 2.280524 CTTCAACGCACGACCCCA 60.281 61.111 0.00 0.00 0.00 4.96
4956 10806 1.890041 CTTCAACGCACGACCCCAA 60.890 57.895 0.00 0.00 0.00 4.12
4957 10807 1.440938 CTTCAACGCACGACCCCAAA 61.441 55.000 0.00 0.00 0.00 3.28
4958 10808 0.820074 TTCAACGCACGACCCCAAAT 60.820 50.000 0.00 0.00 0.00 2.32
4959 10809 1.081509 CAACGCACGACCCCAAATG 60.082 57.895 0.00 0.00 0.00 2.32
4960 10810 2.265182 AACGCACGACCCCAAATGG 61.265 57.895 0.00 0.00 0.00 3.16
4961 10811 2.671619 CGCACGACCCCAAATGGT 60.672 61.111 0.00 0.00 42.79 3.55
4969 10819 2.215942 ACCCCAAATGGTCTTGCTAC 57.784 50.000 0.00 0.00 31.15 3.58
4970 10820 1.094785 CCCCAAATGGTCTTGCTACG 58.905 55.000 0.00 0.00 0.00 3.51
4971 10821 1.613255 CCCCAAATGGTCTTGCTACGT 60.613 52.381 0.00 0.00 0.00 3.57
4972 10822 2.159382 CCCAAATGGTCTTGCTACGTT 58.841 47.619 0.00 0.00 0.00 3.99
4973 10823 2.161609 CCCAAATGGTCTTGCTACGTTC 59.838 50.000 0.00 0.00 0.00 3.95
4974 10824 2.159707 CCAAATGGTCTTGCTACGTTCG 60.160 50.000 0.00 0.00 0.00 3.95
4975 10825 2.450609 AATGGTCTTGCTACGTTCGT 57.549 45.000 0.00 2.91 0.00 3.85
4976 10826 2.450609 ATGGTCTTGCTACGTTCGTT 57.549 45.000 2.62 0.00 0.00 3.85
4977 10827 2.228138 TGGTCTTGCTACGTTCGTTT 57.772 45.000 2.62 0.00 0.00 3.60
4978 10828 1.862201 TGGTCTTGCTACGTTCGTTTG 59.138 47.619 2.62 0.00 0.00 2.93
4979 10829 1.193874 GGTCTTGCTACGTTCGTTTGG 59.806 52.381 2.62 0.00 0.00 3.28
4980 10830 1.193874 GTCTTGCTACGTTCGTTTGGG 59.806 52.381 2.62 0.00 0.00 4.12
4981 10831 0.515564 CTTGCTACGTTCGTTTGGGG 59.484 55.000 2.62 0.00 0.00 4.96
4982 10832 0.885596 TTGCTACGTTCGTTTGGGGG 60.886 55.000 2.62 0.00 0.00 5.40
4983 10833 1.301953 GCTACGTTCGTTTGGGGGT 60.302 57.895 2.62 0.00 0.00 4.95
4984 10834 0.037419 GCTACGTTCGTTTGGGGGTA 60.037 55.000 2.62 0.00 0.00 3.69
4985 10835 1.607767 GCTACGTTCGTTTGGGGGTAA 60.608 52.381 2.62 0.00 0.00 2.85
4986 10836 2.765122 CTACGTTCGTTTGGGGGTAAA 58.235 47.619 2.62 0.00 0.00 2.01
4987 10837 1.308047 ACGTTCGTTTGGGGGTAAAC 58.692 50.000 0.00 0.00 37.23 2.01
4992 10842 3.418022 GTTTGGGGGTAAACGGACA 57.582 52.632 0.00 0.00 31.67 4.02
4993 10843 1.241165 GTTTGGGGGTAAACGGACAG 58.759 55.000 0.00 0.00 31.67 3.51
4994 10844 1.138568 TTTGGGGGTAAACGGACAGA 58.861 50.000 0.00 0.00 0.00 3.41
4995 10845 1.138568 TTGGGGGTAAACGGACAGAA 58.861 50.000 0.00 0.00 0.00 3.02
4996 10846 0.397564 TGGGGGTAAACGGACAGAAC 59.602 55.000 0.00 0.00 0.00 3.01
4997 10847 0.397564 GGGGGTAAACGGACAGAACA 59.602 55.000 0.00 0.00 0.00 3.18
4998 10848 1.003928 GGGGGTAAACGGACAGAACAT 59.996 52.381 0.00 0.00 0.00 2.71
4999 10849 2.081462 GGGGTAAACGGACAGAACATG 58.919 52.381 0.00 0.00 0.00 3.21
5000 10850 1.467342 GGGTAAACGGACAGAACATGC 59.533 52.381 0.00 0.00 0.00 4.06
5001 10851 1.467342 GGTAAACGGACAGAACATGCC 59.533 52.381 0.00 0.00 0.00 4.40
5004 10854 3.474806 CGGACAGAACATGCCGTC 58.525 61.111 0.00 0.00 41.07 4.79
5005 10855 2.100631 CGGACAGAACATGCCGTCC 61.101 63.158 11.50 11.50 43.73 4.79
5006 10856 1.003839 GGACAGAACATGCCGTCCA 60.004 57.895 15.02 0.00 45.96 4.02
5007 10857 0.605319 GGACAGAACATGCCGTCCAA 60.605 55.000 15.02 0.00 45.96 3.53
5008 10858 0.517316 GACAGAACATGCCGTCCAAC 59.483 55.000 0.00 0.00 0.00 3.77
5009 10859 0.889186 ACAGAACATGCCGTCCAACC 60.889 55.000 0.00 0.00 0.00 3.77
5010 10860 1.671054 AGAACATGCCGTCCAACCG 60.671 57.895 0.00 0.00 0.00 4.44
5011 10861 3.322706 GAACATGCCGTCCAACCGC 62.323 63.158 0.00 0.00 0.00 5.68
5019 10869 4.643387 GTCCAACCGCCTGGCAGT 62.643 66.667 20.29 11.16 39.70 4.40
5020 10870 3.884774 TCCAACCGCCTGGCAGTT 61.885 61.111 20.29 17.23 39.70 3.16
5021 10871 3.365265 CCAACCGCCTGGCAGTTC 61.365 66.667 17.08 3.83 39.70 3.01
5022 10872 2.594303 CAACCGCCTGGCAGTTCA 60.594 61.111 17.08 0.00 39.70 3.18
5023 10873 2.192861 CAACCGCCTGGCAGTTCAA 61.193 57.895 17.08 0.00 39.70 2.69
5024 10874 2.193536 AACCGCCTGGCAGTTCAAC 61.194 57.895 20.29 0.00 39.70 3.18
5025 10875 2.594303 CCGCCTGGCAGTTCAACA 60.594 61.111 20.29 0.00 0.00 3.33
5026 10876 2.639286 CGCCTGGCAGTTCAACAC 59.361 61.111 20.29 0.00 0.00 3.32
5027 10877 2.186160 CGCCTGGCAGTTCAACACA 61.186 57.895 20.29 0.00 0.00 3.72
5028 10878 1.518056 CGCCTGGCAGTTCAACACAT 61.518 55.000 20.29 0.00 0.00 3.21
5029 10879 0.242017 GCCTGGCAGTTCAACACATC 59.758 55.000 15.17 0.00 0.00 3.06
5030 10880 1.901591 CCTGGCAGTTCAACACATCT 58.098 50.000 14.43 0.00 0.00 2.90
5050 10900 4.569943 TCTTCTCAAAATAGACTTGCGCT 58.430 39.130 9.73 0.00 0.00 5.92
5055 10905 2.393271 AAATAGACTTGCGCTCTGCT 57.607 45.000 9.73 3.70 46.63 4.24
5056 10906 3.526931 AAATAGACTTGCGCTCTGCTA 57.473 42.857 9.73 6.03 46.63 3.49
5170 11036 0.320073 GGACGAAACGTGGATGACCA 60.320 55.000 0.62 0.00 41.37 4.02
5181 11047 1.221840 GATGACCATCCACCGCTGT 59.778 57.895 0.00 0.00 31.76 4.40
5209 11075 2.066340 GGTCATCCCACCACACTCA 58.934 57.895 0.00 0.00 36.32 3.41
5384 11256 2.825387 GCAGGCATCACCGCATCA 60.825 61.111 0.00 0.00 46.52 3.07
5394 11266 0.319813 CACCGCATCAGTGTCAGACA 60.320 55.000 0.00 0.00 0.00 3.41
5406 11278 0.951040 GTCAGACAAGCCGACAAGGG 60.951 60.000 0.00 0.00 41.48 3.95
5539 11411 4.147449 TCACCATCGCGAGGCCTG 62.147 66.667 12.00 12.47 0.00 4.85
5542 11414 3.933722 CCATCGCGAGGCCTGGAT 61.934 66.667 20.35 11.65 31.91 3.41
5617 11491 1.557651 GGAACTACCTTCATCGTCGC 58.442 55.000 0.00 0.00 35.41 5.19
5619 11493 1.134560 GAACTACCTTCATCGTCGCCT 59.865 52.381 0.00 0.00 0.00 5.52
5621 11495 0.738975 CTACCTTCATCGTCGCCTCA 59.261 55.000 0.00 0.00 0.00 3.86
5622 11496 0.738975 TACCTTCATCGTCGCCTCAG 59.261 55.000 0.00 0.00 0.00 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.335891 GCTACTTTTCTTCTTTAGCTTTCATTC 57.664 33.333 0.00 0.00 33.74 2.67
4 5 8.850156 TGCTACTTTTCTTCTTTAGCTTTCATT 58.150 29.630 0.00 0.00 36.83 2.57
5 6 8.396272 TGCTACTTTTCTTCTTTAGCTTTCAT 57.604 30.769 0.00 0.00 36.83 2.57
34 35 1.677576 CAGCCATAACATTCACCGCAT 59.322 47.619 0.00 0.00 0.00 4.73
58 59 9.184523 CACACCCATACCATTTTCTAAAAGATA 57.815 33.333 0.00 0.00 0.00 1.98
61 62 6.099341 GCACACCCATACCATTTTCTAAAAG 58.901 40.000 0.00 0.00 0.00 2.27
63 64 4.464597 GGCACACCCATACCATTTTCTAAA 59.535 41.667 0.00 0.00 0.00 1.85
67 68 1.134175 CGGCACACCCATACCATTTTC 59.866 52.381 0.00 0.00 0.00 2.29
74 82 0.730840 GCTTTACGGCACACCCATAC 59.269 55.000 0.00 0.00 0.00 2.39
87 95 0.784614 GTTTCACGCTCGCGCTTTAC 60.785 55.000 11.65 1.70 44.19 2.01
99 107 1.683790 GACCGCGATGGAGTTTCACG 61.684 60.000 8.23 0.00 42.00 4.35
115 123 1.141234 GTAGCGTACCAGGCTGACC 59.859 63.158 17.94 1.87 39.91 4.02
151 159 6.454318 CCACGAACTCGAATATTTTCAGAGTG 60.454 42.308 17.10 11.61 40.99 3.51
175 211 2.093764 AGACATCAGCTTCAGCACTACC 60.094 50.000 0.75 0.00 45.16 3.18
193 229 7.359264 CCAAATCAATTATCGTATCGGTGAGAC 60.359 40.741 0.00 0.00 0.00 3.36
260 300 5.837437 ACTAGGCTTCTCATCTTGATTACG 58.163 41.667 0.00 0.00 0.00 3.18
261 301 6.699642 GTGACTAGGCTTCTCATCTTGATTAC 59.300 42.308 0.00 0.00 0.00 1.89
289 329 1.735376 CTGCTGCAAGATGATGGGGC 61.735 60.000 3.02 0.00 34.07 5.80
291 331 1.022735 GTCTGCTGCAAGATGATGGG 58.977 55.000 3.02 0.00 34.07 4.00
293 333 2.159421 GGTTGTCTGCTGCAAGATGATG 60.159 50.000 3.02 0.00 34.07 3.07
294 334 2.089980 GGTTGTCTGCTGCAAGATGAT 58.910 47.619 3.02 0.00 34.07 2.45
295 335 1.527034 GGTTGTCTGCTGCAAGATGA 58.473 50.000 3.02 0.00 34.07 2.92
329 369 0.322546 GCTGGTTGGTCCTGGGTAAG 60.323 60.000 0.00 0.00 35.96 2.34
346 386 2.795231 ATGTAGTGATTGGTGCTGCT 57.205 45.000 0.00 0.00 0.00 4.24
347 387 3.797039 TCTATGTAGTGATTGGTGCTGC 58.203 45.455 0.00 0.00 0.00 5.25
348 388 9.310716 CATATATCTATGTAGTGATTGGTGCTG 57.689 37.037 0.00 0.00 31.76 4.41
350 390 9.307121 GACATATATCTATGTAGTGATTGGTGC 57.693 37.037 3.89 0.00 46.28 5.01
395 435 1.263217 CCGCCTGTGTCACTGTAAAAC 59.737 52.381 4.27 0.00 0.00 2.43
415 455 1.205417 CTGGTGGAAATGGAATGGCAC 59.795 52.381 0.00 0.00 0.00 5.01
421 461 5.255397 ACTCATTACTGGTGGAAATGGAA 57.745 39.130 0.00 0.00 32.63 3.53
422 462 4.927267 ACTCATTACTGGTGGAAATGGA 57.073 40.909 0.00 0.00 32.63 3.41
423 463 5.357032 GGTAACTCATTACTGGTGGAAATGG 59.643 44.000 0.00 0.00 40.59 3.16
424 464 5.943416 TGGTAACTCATTACTGGTGGAAATG 59.057 40.000 0.00 0.00 40.59 2.32
425 465 5.944007 GTGGTAACTCATTACTGGTGGAAAT 59.056 40.000 0.00 0.00 40.59 2.17
426 466 5.072600 AGTGGTAACTCATTACTGGTGGAAA 59.927 40.000 0.00 0.00 40.59 3.13
454 494 7.229306 ACACAACTGAATTATGTGAACATGACT 59.771 33.333 11.66 0.00 45.61 3.41
479 519 1.014352 GGGATGTGATGCGTTACCAC 58.986 55.000 0.00 0.00 0.00 4.16
572 613 1.079405 TGTGCCTCGTCGGGATTTC 60.079 57.895 0.00 0.00 34.70 2.17
694 735 0.105760 TGGTGGATTGGGTTGCACTT 60.106 50.000 0.00 0.00 37.98 3.16
695 736 0.827507 GTGGTGGATTGGGTTGCACT 60.828 55.000 0.00 0.00 37.98 4.40
696 737 1.665442 GTGGTGGATTGGGTTGCAC 59.335 57.895 0.00 0.00 37.24 4.57
697 738 1.532794 GGTGGTGGATTGGGTTGCA 60.533 57.895 0.00 0.00 0.00 4.08
698 739 2.282783 GGGTGGTGGATTGGGTTGC 61.283 63.158 0.00 0.00 0.00 4.17
699 740 0.899717 CTGGGTGGTGGATTGGGTTG 60.900 60.000 0.00 0.00 0.00 3.77
749 796 0.251916 TCCGCAAGAATAGTGGTGGG 59.748 55.000 0.00 0.00 43.02 4.61
765 812 4.355437 GACGCAGAGGAATATGATATCCG 58.645 47.826 0.00 0.00 40.78 4.18
822 869 4.747540 CGGGAATAAATCGCAATGATGA 57.252 40.909 0.00 0.00 40.89 2.92
919 966 7.759450 AGAAGTGCTCCTGCTTCTCAAGAAG 62.759 48.000 14.18 14.18 45.71 2.85
952 999 2.395690 CGAACAGCGATCGTTGCC 59.604 61.111 28.72 19.92 44.57 4.52
957 1004 2.158959 GGACCACGAACAGCGATCG 61.159 63.158 11.69 11.69 44.57 3.69
958 1005 1.078759 CAGGACCACGAACAGCGATC 61.079 60.000 0.00 0.00 44.57 3.69
1062 1116 1.493861 GTAGGAGTAGGGGTGGTTCC 58.506 60.000 0.00 0.00 0.00 3.62
1076 1130 0.387929 CGCCGCTGAATTAGGTAGGA 59.612 55.000 0.00 0.00 0.00 2.94
1080 1134 2.513897 GGCGCCGCTGAATTAGGT 60.514 61.111 12.58 0.00 0.00 3.08
1097 1153 5.604010 AGCAAGAAGAAGAAAATCAGTCG 57.396 39.130 0.00 0.00 0.00 4.18
1222 1294 3.118531 AGCAGAGGATGGGTATTCAGTT 58.881 45.455 0.00 0.00 0.00 3.16
1229 1301 2.245028 ACAGAGTAGCAGAGGATGGGTA 59.755 50.000 0.00 0.00 0.00 3.69
1234 1306 2.031120 GCAGACAGAGTAGCAGAGGAT 58.969 52.381 0.00 0.00 0.00 3.24
1235 1307 1.468985 GCAGACAGAGTAGCAGAGGA 58.531 55.000 0.00 0.00 0.00 3.71
1237 1309 0.100325 CCGCAGACAGAGTAGCAGAG 59.900 60.000 0.00 0.00 0.00 3.35
1238 1310 0.609406 ACCGCAGACAGAGTAGCAGA 60.609 55.000 0.00 0.00 0.00 4.26
1239 1311 0.457509 CACCGCAGACAGAGTAGCAG 60.458 60.000 0.00 0.00 0.00 4.24
1241 1313 1.807573 GCACCGCAGACAGAGTAGC 60.808 63.158 0.00 0.00 0.00 3.58
1242 1314 1.153745 GGCACCGCAGACAGAGTAG 60.154 63.158 0.00 0.00 0.00 2.57
1243 1315 1.257750 ATGGCACCGCAGACAGAGTA 61.258 55.000 0.00 0.00 0.00 2.59
1244 1316 2.116983 AATGGCACCGCAGACAGAGT 62.117 55.000 0.00 0.00 0.00 3.24
1285 1381 3.023832 GGATTGGAATTCGGAACCATGT 58.976 45.455 0.00 0.00 33.56 3.21
1293 1389 0.748005 ACCTGCGGATTGGAATTCGG 60.748 55.000 0.00 0.00 37.86 4.30
1295 1391 1.750193 TCACCTGCGGATTGGAATTC 58.250 50.000 0.00 0.00 0.00 2.17
1396 1492 0.742990 TGAATCGGTTAAGCAGGCCG 60.743 55.000 5.38 0.06 46.12 6.13
1397 1493 1.604278 GATGAATCGGTTAAGCAGGCC 59.396 52.381 5.38 0.00 0.00 5.19
1398 1494 1.261619 CGATGAATCGGTTAAGCAGGC 59.738 52.381 5.38 0.00 45.93 4.85
1409 1505 2.985745 GGCAGACAAGCCGATGAATCG 61.986 57.143 5.72 5.72 46.12 3.34
1410 1506 0.659957 GGCAGACAAGCCGATGAATC 59.340 55.000 0.00 0.00 46.12 2.52
1428 1524 4.742201 CGGTGGGCGTCAGTCAGG 62.742 72.222 0.00 0.00 0.00 3.86
1431 1527 1.226888 GATACGGTGGGCGTCAGTC 60.227 63.158 0.00 0.00 0.00 3.51
1432 1528 1.327690 ATGATACGGTGGGCGTCAGT 61.328 55.000 0.00 0.00 0.00 3.41
1444 1540 1.071894 CGCTTCAGCAACGATGATACG 60.072 52.381 0.00 0.00 42.21 3.06
1447 1543 0.742281 AGCGCTTCAGCAACGATGAT 60.742 50.000 2.64 0.00 42.21 2.45
1532 1634 3.482783 GCGCTCTGCACGAGGAAC 61.483 66.667 0.00 0.00 45.45 3.62
1565 1667 2.170187 GACAAGATCTCTCATGGTGGCT 59.830 50.000 0.00 0.00 0.00 4.75
1583 1685 1.975680 GAACCTACCAGTTCAGGGACA 59.024 52.381 0.00 0.00 44.55 4.02
1614 1716 0.535328 CCATCAGCCAGCAGGAGATG 60.535 60.000 18.25 18.25 43.21 2.90
1626 1729 1.760192 AAACAGAGGCATCCATCAGC 58.240 50.000 0.00 0.00 0.00 4.26
1639 1742 7.262772 CCTGAGAAATGTACCGTATAAACAGA 58.737 38.462 0.00 0.00 0.00 3.41
1640 1743 6.018994 GCCTGAGAAATGTACCGTATAAACAG 60.019 42.308 0.00 0.00 0.00 3.16
1648 1751 0.606604 ACGCCTGAGAAATGTACCGT 59.393 50.000 0.00 0.00 0.00 4.83
1655 1758 1.933853 GTCGCATTACGCCTGAGAAAT 59.066 47.619 0.00 0.00 43.23 2.17
1662 1766 1.375013 AAACCGTCGCATTACGCCT 60.375 52.632 0.00 0.00 43.23 5.52
1713 1823 1.004560 CCGCAGCTTGAACTCCTCA 60.005 57.895 0.00 0.00 0.00 3.86
1791 1901 3.144120 CTCTGACCGAGGGGATGCG 62.144 68.421 0.00 0.00 36.06 4.73
1839 1949 1.154413 CACGGCATCAAACGCTGAC 60.154 57.895 0.00 0.00 39.15 3.51
1877 1987 4.120792 TGTTCTTGATGCAGCACAAAAA 57.879 36.364 2.94 0.00 0.00 1.94
2001 2111 2.238646 AGTGTGTTTTGACTGACTGGGA 59.761 45.455 0.00 0.00 0.00 4.37
2006 2116 2.161410 TGTGCAGTGTGTTTTGACTGAC 59.839 45.455 0.00 0.00 41.90 3.51
2007 2117 2.161410 GTGTGCAGTGTGTTTTGACTGA 59.839 45.455 0.00 0.00 41.90 3.41
2008 2118 2.162208 AGTGTGCAGTGTGTTTTGACTG 59.838 45.455 0.00 0.00 42.18 3.51
2009 2119 2.162208 CAGTGTGCAGTGTGTTTTGACT 59.838 45.455 0.00 0.00 0.00 3.41
2083 2193 5.479724 TGTGTTCAGATATTTTTGGCCATGA 59.520 36.000 6.09 0.72 0.00 3.07
2087 2197 7.333528 TCTATGTGTTCAGATATTTTTGGCC 57.666 36.000 0.00 0.00 0.00 5.36
2088 2198 7.800380 CGATCTATGTGTTCAGATATTTTTGGC 59.200 37.037 0.00 0.00 31.63 4.52
2089 2199 9.045223 TCGATCTATGTGTTCAGATATTTTTGG 57.955 33.333 0.00 0.00 31.63 3.28
2235 2377 3.281727 TCTCCAACAAGCATGGATACC 57.718 47.619 0.00 0.00 45.57 2.73
2241 2383 9.722056 GTATATACTTTTTCTCCAACAAGCATG 57.278 33.333 5.58 0.00 0.00 4.06
2243 2385 8.856153 TGTATATACTTTTTCTCCAACAAGCA 57.144 30.769 13.89 0.00 0.00 3.91
2291 2433 4.042187 GGGGTCTTACCATATCTTGCTGAT 59.958 45.833 0.00 0.00 41.02 2.90
2381 2523 7.596494 AGAAAATGATGTTGGATGTTACACTG 58.404 34.615 0.00 0.00 0.00 3.66
2427 2569 3.129813 CCGCCGGTGCTACTATGAATATA 59.870 47.826 10.27 0.00 34.43 0.86
2429 2571 1.271379 CCGCCGGTGCTACTATGAATA 59.729 52.381 10.27 0.00 34.43 1.75
2446 2588 4.874977 GCCCGTGAGTAGCTCCGC 62.875 72.222 0.00 0.00 0.00 5.54
2513 2655 1.474320 GCTGGGCAATGGTCATACGTA 60.474 52.381 0.00 0.00 0.00 3.57
2514 2656 0.748005 GCTGGGCAATGGTCATACGT 60.748 55.000 0.00 0.00 0.00 3.57
2532 2674 1.154035 GCGTTTGGGCTATGTGTGC 60.154 57.895 0.00 0.00 0.00 4.57
2560 2722 1.341285 TGCTGCTCTATTGGTGGCAAT 60.341 47.619 0.00 0.00 34.21 3.56
2576 2738 1.066136 CAGATGTGTCAGTCGTGCTG 58.934 55.000 3.92 3.92 46.34 4.41
2712 2874 2.925724 TGACTCTAGCTCAGCTCCTAC 58.074 52.381 0.00 0.00 40.44 3.18
2765 2927 2.821366 GCAGCCACATCAGACGGG 60.821 66.667 0.00 0.00 0.00 5.28
2815 4667 4.939052 TTTGAAATTTTAACCTGCCGGA 57.061 36.364 5.05 0.00 0.00 5.14
2896 4749 7.604164 GGATTTGCATGCATACTACTACTATGT 59.396 37.037 23.37 0.00 0.00 2.29
2897 4750 7.201470 CGGATTTGCATGCATACTACTACTATG 60.201 40.741 23.37 0.00 0.00 2.23
2898 4751 6.813649 CGGATTTGCATGCATACTACTACTAT 59.186 38.462 23.37 0.00 0.00 2.12
2899 4752 6.156519 CGGATTTGCATGCATACTACTACTA 58.843 40.000 23.37 0.00 0.00 1.82
2900 4753 4.991056 CGGATTTGCATGCATACTACTACT 59.009 41.667 23.37 0.00 0.00 2.57
2901 4754 4.152402 CCGGATTTGCATGCATACTACTAC 59.848 45.833 23.37 1.16 0.00 2.73
2902 4755 4.202315 ACCGGATTTGCATGCATACTACTA 60.202 41.667 23.37 0.58 0.00 1.82
2903 4756 3.141398 CCGGATTTGCATGCATACTACT 58.859 45.455 23.37 0.83 0.00 2.57
2904 4757 2.878406 ACCGGATTTGCATGCATACTAC 59.122 45.455 23.37 8.95 0.00 2.73
2905 4758 3.207265 ACCGGATTTGCATGCATACTA 57.793 42.857 23.37 2.82 0.00 1.82
2906 4759 2.057137 ACCGGATTTGCATGCATACT 57.943 45.000 23.37 9.13 0.00 2.12
2927 4785 8.789825 TCATTTTTATTTTGGAACCATCATGG 57.210 30.769 0.54 0.54 45.02 3.66
3045 4904 9.752961 TGTCATGATAATATTTTCCTTGCATTG 57.247 29.630 0.00 0.00 0.00 2.82
3104 4965 7.015682 TGGGCCAAAAGAAAAACATGACTAATA 59.984 33.333 2.13 0.00 0.00 0.98
3112 4973 4.703379 TCATGGGCCAAAAGAAAAACAT 57.297 36.364 11.89 0.00 0.00 2.71
3119 4980 5.878406 TTTAAACTTCATGGGCCAAAAGA 57.122 34.783 28.69 17.68 0.00 2.52
3120 4981 5.238432 GGTTTTAAACTTCATGGGCCAAAAG 59.762 40.000 23.24 23.24 0.00 2.27
3124 4985 3.309296 TGGTTTTAAACTTCATGGGCCA 58.691 40.909 9.61 9.61 0.00 5.36
3146 5007 7.954666 TTAGGAGCTAACTGCCAAATTTATT 57.045 32.000 0.84 0.00 44.23 1.40
3154 5015 5.887214 TCAATATTAGGAGCTAACTGCCA 57.113 39.130 0.84 0.00 44.23 4.92
3156 5017 7.553881 TTGTTCAATATTAGGAGCTAACTGC 57.446 36.000 0.84 0.00 43.29 4.40
3166 5027 7.276218 CAGGCACACAATTTGTTCAATATTAGG 59.724 37.037 0.00 0.00 35.67 2.69
3178 5170 1.955778 TGAGACCAGGCACACAATTTG 59.044 47.619 0.00 0.00 0.00 2.32
3188 5180 1.376553 GCTTCAGGTGAGACCAGGC 60.377 63.158 0.00 0.00 41.95 4.85
3198 5190 0.698238 TTGGCCATAGTGCTTCAGGT 59.302 50.000 6.09 0.00 0.00 4.00
3200 5192 1.066605 GCATTGGCCATAGTGCTTCAG 59.933 52.381 23.47 1.89 34.85 3.02
3208 5200 0.747644 TGTCCACGCATTGGCCATAG 60.748 55.000 6.09 2.81 46.47 2.23
3224 5216 4.819783 TGGTTGCTGGACCATGTC 57.180 55.556 0.00 0.00 44.53 3.06
3235 5227 2.126346 GTGGCTTCGCATGGTTGC 60.126 61.111 0.00 0.00 45.78 4.17
3236 5228 1.597797 ATGGTGGCTTCGCATGGTTG 61.598 55.000 0.00 0.00 0.00 3.77
3237 5229 1.304381 ATGGTGGCTTCGCATGGTT 60.304 52.632 0.00 0.00 0.00 3.67
3238 5230 2.048023 CATGGTGGCTTCGCATGGT 61.048 57.895 0.00 0.00 0.00 3.55
3239 5231 1.996786 GACATGGTGGCTTCGCATGG 61.997 60.000 0.00 0.00 0.00 3.66
3240 5232 1.430632 GACATGGTGGCTTCGCATG 59.569 57.895 0.00 0.00 0.00 4.06
3241 5233 1.750399 GGACATGGTGGCTTCGCAT 60.750 57.895 0.00 0.00 0.00 4.73
3242 5234 2.359850 GGACATGGTGGCTTCGCA 60.360 61.111 0.00 0.00 0.00 5.10
3243 5235 2.359850 TGGACATGGTGGCTTCGC 60.360 61.111 0.00 0.00 0.00 4.70
3244 5236 1.302431 TGTGGACATGGTGGCTTCG 60.302 57.895 0.00 0.00 0.00 3.79
3245 5237 0.250901 AGTGTGGACATGGTGGCTTC 60.251 55.000 0.00 0.00 0.00 3.86
3246 5238 0.538057 CAGTGTGGACATGGTGGCTT 60.538 55.000 0.00 0.00 0.00 4.35
3247 5239 1.073722 CAGTGTGGACATGGTGGCT 59.926 57.895 0.00 0.00 0.00 4.75
3248 5240 1.973281 CCAGTGTGGACATGGTGGC 60.973 63.158 0.00 0.00 40.96 5.01
3249 5241 0.321919 CTCCAGTGTGGACATGGTGG 60.322 60.000 0.00 0.00 42.67 4.61
3250 5242 0.397941 ACTCCAGTGTGGACATGGTG 59.602 55.000 0.00 0.00 42.67 4.17
3251 5243 1.140312 AACTCCAGTGTGGACATGGT 58.860 50.000 0.00 0.00 42.67 3.55
3252 5244 2.276732 AAACTCCAGTGTGGACATGG 57.723 50.000 0.00 0.00 42.67 3.66
3253 5245 5.766150 TTAAAAACTCCAGTGTGGACATG 57.234 39.130 0.00 0.00 42.67 3.21
3254 5246 5.243730 CCATTAAAAACTCCAGTGTGGACAT 59.756 40.000 0.00 0.00 42.67 3.06
3255 5247 4.582656 CCATTAAAAACTCCAGTGTGGACA 59.417 41.667 0.00 0.00 42.67 4.02
3256 5248 4.825085 TCCATTAAAAACTCCAGTGTGGAC 59.175 41.667 0.00 0.00 42.67 4.02
3257 5249 5.055265 TCCATTAAAAACTCCAGTGTGGA 57.945 39.130 0.00 0.00 45.98 4.02
3258 5250 5.982890 ATCCATTAAAAACTCCAGTGTGG 57.017 39.130 0.00 0.00 39.43 4.17
3259 5251 7.925483 TGAAAATCCATTAAAAACTCCAGTGTG 59.075 33.333 0.00 0.00 0.00 3.82
3260 5252 8.017418 TGAAAATCCATTAAAAACTCCAGTGT 57.983 30.769 0.00 0.00 0.00 3.55
3261 5253 8.885494 TTGAAAATCCATTAAAAACTCCAGTG 57.115 30.769 0.00 0.00 0.00 3.66
3304 5296 3.527533 CCTACGCACCACTAGCAAATTA 58.472 45.455 0.00 0.00 0.00 1.40
3308 5300 1.594833 CCCTACGCACCACTAGCAA 59.405 57.895 0.00 0.00 0.00 3.91
3309 5301 2.355986 CCCCTACGCACCACTAGCA 61.356 63.158 0.00 0.00 0.00 3.49
3310 5302 2.499685 CCCCTACGCACCACTAGC 59.500 66.667 0.00 0.00 0.00 3.42
3311 5303 1.686325 ATGCCCCTACGCACCACTAG 61.686 60.000 0.00 0.00 42.70 2.57
3312 5304 1.687840 ATGCCCCTACGCACCACTA 60.688 57.895 0.00 0.00 42.70 2.74
3313 5305 3.009115 ATGCCCCTACGCACCACT 61.009 61.111 0.00 0.00 42.70 4.00
3314 5306 2.824041 CATGCCCCTACGCACCAC 60.824 66.667 0.00 0.00 42.70 4.16
3315 5307 2.901281 AACATGCCCCTACGCACCA 61.901 57.895 0.00 0.00 42.70 4.17
3316 5308 2.045340 AACATGCCCCTACGCACC 60.045 61.111 0.00 0.00 42.70 5.01
3317 5309 1.369091 CTCAACATGCCCCTACGCAC 61.369 60.000 0.00 0.00 42.70 5.34
3318 5310 1.078497 CTCAACATGCCCCTACGCA 60.078 57.895 0.00 0.00 44.35 5.24
3319 5311 0.179045 ATCTCAACATGCCCCTACGC 60.179 55.000 0.00 0.00 0.00 4.42
3320 5312 3.469008 TTATCTCAACATGCCCCTACG 57.531 47.619 0.00 0.00 0.00 3.51
3321 5313 7.168219 TCATATTTATCTCAACATGCCCCTAC 58.832 38.462 0.00 0.00 0.00 3.18
3322 5314 7.328404 TCATATTTATCTCAACATGCCCCTA 57.672 36.000 0.00 0.00 0.00 3.53
3324 5316 7.831193 ACTATCATATTTATCTCAACATGCCCC 59.169 37.037 0.00 0.00 0.00 5.80
3326 5318 8.671921 CCACTATCATATTTATCTCAACATGCC 58.328 37.037 0.00 0.00 0.00 4.40
3327 5319 8.671921 CCCACTATCATATTTATCTCAACATGC 58.328 37.037 0.00 0.00 0.00 4.06
3328 5320 9.170734 CCCCACTATCATATTTATCTCAACATG 57.829 37.037 0.00 0.00 0.00 3.21
3329 5321 9.116080 TCCCCACTATCATATTTATCTCAACAT 57.884 33.333 0.00 0.00 0.00 2.71
3330 5322 8.504811 TCCCCACTATCATATTTATCTCAACA 57.495 34.615 0.00 0.00 0.00 3.33
3332 5324 9.337714 TCATCCCCACTATCATATTTATCTCAA 57.662 33.333 0.00 0.00 0.00 3.02
3333 5325 8.762645 GTCATCCCCACTATCATATTTATCTCA 58.237 37.037 0.00 0.00 0.00 3.27
3334 5326 8.986991 AGTCATCCCCACTATCATATTTATCTC 58.013 37.037 0.00 0.00 0.00 2.75
3335 5327 8.923838 AGTCATCCCCACTATCATATTTATCT 57.076 34.615 0.00 0.00 0.00 1.98
3336 5328 8.986991 AGAGTCATCCCCACTATCATATTTATC 58.013 37.037 0.00 0.00 0.00 1.75
3337 5329 8.923838 AGAGTCATCCCCACTATCATATTTAT 57.076 34.615 0.00 0.00 0.00 1.40
3338 5330 8.180165 AGAGAGTCATCCCCACTATCATATTTA 58.820 37.037 0.00 0.00 35.02 1.40
3339 5331 7.021873 AGAGAGTCATCCCCACTATCATATTT 58.978 38.462 0.00 0.00 35.02 1.40
3340 5332 6.569737 AGAGAGTCATCCCCACTATCATATT 58.430 40.000 0.00 0.00 35.02 1.28
3341 5333 6.164425 AGAGAGTCATCCCCACTATCATAT 57.836 41.667 0.00 0.00 35.02 1.78
3345 5337 4.770010 CCTAAGAGAGTCATCCCCACTATC 59.230 50.000 0.00 0.00 33.11 2.08
3347 5339 3.532232 ACCTAAGAGAGTCATCCCCACTA 59.468 47.826 0.00 0.00 0.00 2.74
3349 5341 2.753247 ACCTAAGAGAGTCATCCCCAC 58.247 52.381 0.00 0.00 0.00 4.61
3351 5343 4.484912 ACATACCTAAGAGAGTCATCCCC 58.515 47.826 0.00 0.00 0.00 4.81
3352 5344 5.712917 CCTACATACCTAAGAGAGTCATCCC 59.287 48.000 0.00 0.00 0.00 3.85
3353 5345 6.544650 TCCTACATACCTAAGAGAGTCATCC 58.455 44.000 0.00 0.00 0.00 3.51
3354 5346 8.644374 AATCCTACATACCTAAGAGAGTCATC 57.356 38.462 0.00 0.00 0.00 2.92
3356 5348 9.931698 TTTAATCCTACATACCTAAGAGAGTCA 57.068 33.333 0.00 0.00 0.00 3.41
3413 5405 9.928618 TGGTTCCTTTGAATATGTATGGATTTA 57.071 29.630 0.00 0.00 31.98 1.40
3429 5421 6.494893 TTCACGAATTATCTGGTTCCTTTG 57.505 37.500 0.00 0.00 0.00 2.77
3430 5422 7.519032 TTTTCACGAATTATCTGGTTCCTTT 57.481 32.000 0.00 0.00 0.00 3.11
3433 5425 7.312899 ACATTTTTCACGAATTATCTGGTTCC 58.687 34.615 0.00 0.00 0.00 3.62
3434 5426 8.742554 AACATTTTTCACGAATTATCTGGTTC 57.257 30.769 0.00 0.00 0.00 3.62
3441 5433 9.849166 ACCGAATAAACATTTTTCACGAATTAT 57.151 25.926 0.00 0.00 0.00 1.28
3443 5435 9.849166 ATACCGAATAAACATTTTTCACGAATT 57.151 25.926 0.00 0.00 0.00 2.17
3465 5457 6.010219 AGTGGGAATTGTGGCAATATATACC 58.990 40.000 0.00 0.00 0.00 2.73
3467 5459 8.546083 AAAAGTGGGAATTGTGGCAATATATA 57.454 30.769 0.00 0.00 0.00 0.86
3475 5467 3.069443 TGAAGAAAAGTGGGAATTGTGGC 59.931 43.478 0.00 0.00 0.00 5.01
3486 5478 9.617975 GTCAGGAAAGAATTATGAAGAAAAGTG 57.382 33.333 0.00 0.00 0.00 3.16
3487 5479 9.579932 AGTCAGGAAAGAATTATGAAGAAAAGT 57.420 29.630 0.00 0.00 0.00 2.66
3536 5568 9.921637 AGAAGAAGAAACTCAAGTATTACTCTG 57.078 33.333 0.00 0.00 0.00 3.35
3648 5681 9.320295 ACATGTGAAAAGGGGAAGAAAATTATA 57.680 29.630 0.00 0.00 0.00 0.98
3654 5687 5.948742 AAACATGTGAAAAGGGGAAGAAA 57.051 34.783 0.00 0.00 0.00 2.52
3657 5690 8.122472 AGTATAAAACATGTGAAAAGGGGAAG 57.878 34.615 0.00 0.00 0.00 3.46
3658 5691 7.947890 AGAGTATAAAACATGTGAAAAGGGGAA 59.052 33.333 0.00 0.00 0.00 3.97
3660 5693 7.611855 AGAGAGTATAAAACATGTGAAAAGGGG 59.388 37.037 0.00 0.00 0.00 4.79
3678 5712 4.227197 ACAAATCGGGATGGAGAGAGTAT 58.773 43.478 0.00 0.00 0.00 2.12
3684 5718 2.158813 GGCTTACAAATCGGGATGGAGA 60.159 50.000 0.00 0.00 0.00 3.71
3692 5726 1.747367 TGCCCGGCTTACAAATCGG 60.747 57.895 11.61 0.00 41.90 4.18
3704 5738 4.718940 AGATCTAAAAATTTGTGCCCGG 57.281 40.909 0.00 0.00 0.00 5.73
3715 5749 8.902540 TGCTAGTCAAGTTGAAGATCTAAAAA 57.097 30.769 7.25 0.00 0.00 1.94
3716 5750 8.902540 TTGCTAGTCAAGTTGAAGATCTAAAA 57.097 30.769 7.25 0.70 0.00 1.52
3717 5751 8.902540 TTTGCTAGTCAAGTTGAAGATCTAAA 57.097 30.769 7.25 3.22 35.84 1.85
3718 5752 9.155975 GATTTGCTAGTCAAGTTGAAGATCTAA 57.844 33.333 7.25 2.15 35.84 2.10
3719 5753 8.314021 TGATTTGCTAGTCAAGTTGAAGATCTA 58.686 33.333 7.25 4.11 35.84 1.98
3720 5754 7.118971 GTGATTTGCTAGTCAAGTTGAAGATCT 59.881 37.037 7.25 3.05 35.84 2.75
3728 5762 4.127171 ACACGTGATTTGCTAGTCAAGTT 58.873 39.130 25.01 0.00 35.41 2.66
3739 5773 3.550950 TGGCATGTTACACGTGATTTG 57.449 42.857 25.01 12.64 37.29 2.32
3743 5777 3.320673 TGTATGGCATGTTACACGTGA 57.679 42.857 25.01 2.68 37.29 4.35
3746 5780 4.411993 TGTTTGTATGGCATGTTACACG 57.588 40.909 10.98 0.00 0.00 4.49
3836 5871 8.512138 CGGTTTTTAGGTCTTCAATTTGAGTAT 58.488 33.333 0.00 0.00 0.00 2.12
3839 5874 6.636850 CACGGTTTTTAGGTCTTCAATTTGAG 59.363 38.462 0.00 0.00 0.00 3.02
3841 5876 5.174943 GCACGGTTTTTAGGTCTTCAATTTG 59.825 40.000 0.00 0.00 0.00 2.32
3930 7572 3.517602 CATGAAGGTGATTTCGTACGGA 58.482 45.455 16.52 2.84 0.00 4.69
4003 7669 6.538945 AAACAACAATTGGTTAAGTCTGGT 57.461 33.333 10.83 0.00 39.17 4.00
4033 7699 9.349713 TCTCTCAACAATTGGTTAAGTTGTATT 57.650 29.630 10.83 0.00 41.43 1.89
4034 7700 8.918202 TCTCTCAACAATTGGTTAAGTTGTAT 57.082 30.769 10.83 0.00 41.43 2.29
4035 7701 8.918202 ATCTCTCAACAATTGGTTAAGTTGTA 57.082 30.769 10.83 0.00 41.43 2.41
4036 7702 7.823745 ATCTCTCAACAATTGGTTAAGTTGT 57.176 32.000 10.83 0.00 41.43 3.32
4087 7753 8.397906 TCAGTGCTTCATCTTTATTTTTATCCG 58.602 33.333 0.00 0.00 0.00 4.18
4092 7758 8.632679 TGAAGTCAGTGCTTCATCTTTATTTTT 58.367 29.630 19.55 0.00 46.74 1.94
4124 7805 4.466370 TCTTACTGGATTGTCACTACTGGG 59.534 45.833 0.00 0.00 0.00 4.45
4157 7838 4.480537 ACCCCATCCATCAAAGGTGTATAA 59.519 41.667 0.00 0.00 0.00 0.98
4160 7841 2.283834 ACCCCATCCATCAAAGGTGTA 58.716 47.619 0.00 0.00 0.00 2.90
4163 7844 2.358195 GCTTACCCCATCCATCAAAGGT 60.358 50.000 0.00 0.00 0.00 3.50
4164 7845 2.310538 GCTTACCCCATCCATCAAAGG 58.689 52.381 0.00 0.00 0.00 3.11
4172 7853 1.453928 GCTGGTGCTTACCCCATCC 60.454 63.158 0.00 0.00 36.03 3.51
4176 7857 0.532115 CAAATGCTGGTGCTTACCCC 59.468 55.000 0.00 0.00 40.48 4.95
4177 7858 0.532115 CCAAATGCTGGTGCTTACCC 59.468 55.000 0.00 0.00 40.78 3.69
4188 7869 3.266772 TGAGGGAGTTATCACCAAATGCT 59.733 43.478 0.00 0.00 0.00 3.79
4236 7917 1.471153 GCGGAGGGAGTACTAGTTTGC 60.471 57.143 0.00 0.00 0.00 3.68
4237 7918 1.136500 GGCGGAGGGAGTACTAGTTTG 59.864 57.143 0.00 0.00 0.00 2.93
4238 7919 1.482954 GGCGGAGGGAGTACTAGTTT 58.517 55.000 0.00 0.00 0.00 2.66
4239 7920 0.396835 GGGCGGAGGGAGTACTAGTT 60.397 60.000 0.00 0.00 0.00 2.24
4241 7922 1.897615 CGGGCGGAGGGAGTACTAG 60.898 68.421 0.00 0.00 0.00 2.57
4242 7923 2.194056 CGGGCGGAGGGAGTACTA 59.806 66.667 0.00 0.00 0.00 1.82
4243 7924 4.835891 CCGGGCGGAGGGAGTACT 62.836 72.222 0.00 0.00 37.50 2.73
4244 7925 4.828296 TCCGGGCGGAGGGAGTAC 62.828 72.222 0.00 0.00 39.76 2.73
4245 7926 2.884179 ATTTCCGGGCGGAGGGAGTA 62.884 60.000 0.00 0.00 46.06 2.59
4246 7927 2.884179 TATTTCCGGGCGGAGGGAGT 62.884 60.000 0.00 0.00 46.06 3.85
4247 7928 2.138179 TATTTCCGGGCGGAGGGAG 61.138 63.158 0.00 0.00 46.06 4.30
4248 7929 2.041715 TATTTCCGGGCGGAGGGA 60.042 61.111 0.00 0.00 46.06 4.20
4249 7930 1.979619 AAGTATTTCCGGGCGGAGGG 61.980 60.000 0.00 0.00 46.06 4.30
4250 7931 0.814010 CAAGTATTTCCGGGCGGAGG 60.814 60.000 0.00 0.00 46.06 4.30
4251 7932 0.107848 ACAAGTATTTCCGGGCGGAG 60.108 55.000 0.00 0.00 46.06 4.63
4253 7934 0.391927 TGACAAGTATTTCCGGGCGG 60.392 55.000 0.00 0.00 0.00 6.13
4254 7935 1.597663 GATGACAAGTATTTCCGGGCG 59.402 52.381 0.00 0.00 0.00 6.13
4255 7936 2.639065 TGATGACAAGTATTTCCGGGC 58.361 47.619 0.00 0.00 0.00 6.13
4257 7938 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
4333 8014 9.357652 CCGAAAATACTTGTCATCAAAATGAAT 57.642 29.630 0.00 0.00 43.42 2.57
4334 8015 8.572185 TCCGAAAATACTTGTCATCAAAATGAA 58.428 29.630 0.00 0.00 43.42 2.57
4335 8016 8.020819 GTCCGAAAATACTTGTCATCAAAATGA 58.979 33.333 0.00 0.00 39.63 2.57
4336 8017 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
4337 8018 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
4338 8019 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
4339 8020 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
4340 8021 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
4341 8022 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
4342 8023 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
4344 8025 3.663995 TCCGTCCGAAAATACTTGTCA 57.336 42.857 0.00 0.00 0.00 3.58
4345 8026 3.370061 CCTTCCGTCCGAAAATACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
4346 8027 3.007182 TCCTTCCGTCCGAAAATACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
4347 8028 3.592059 TCCTTCCGTCCGAAAATACTTG 58.408 45.455 0.00 0.00 0.00 3.16
4348 8029 3.260128 ACTCCTTCCGTCCGAAAATACTT 59.740 43.478 0.00 0.00 0.00 2.24
4349 8030 2.830321 ACTCCTTCCGTCCGAAAATACT 59.170 45.455 0.00 0.00 0.00 2.12
4351 8032 5.603170 ATTACTCCTTCCGTCCGAAAATA 57.397 39.130 0.00 0.00 0.00 1.40
4353 8034 3.967332 ATTACTCCTTCCGTCCGAAAA 57.033 42.857 0.00 0.00 0.00 2.29
4354 8035 5.603170 AATATTACTCCTTCCGTCCGAAA 57.397 39.130 0.00 0.00 0.00 3.46
4355 8036 5.603170 AAATATTACTCCTTCCGTCCGAA 57.397 39.130 0.00 0.00 0.00 4.30
4356 8037 5.603170 AAAATATTACTCCTTCCGTCCGA 57.397 39.130 0.00 0.00 0.00 4.55
4357 8038 7.654520 TCATTAAAATATTACTCCTTCCGTCCG 59.345 37.037 0.00 0.00 0.00 4.79
4361 8042 8.904099 ACCTCATTAAAATATTACTCCTTCCG 57.096 34.615 0.00 0.00 0.00 4.30
4640 10482 3.125316 GCCTGTGTTGCAGTACTTACATC 59.875 47.826 0.00 0.00 43.55 3.06
4642 10484 2.489971 GCCTGTGTTGCAGTACTTACA 58.510 47.619 0.00 0.00 43.55 2.41
4643 10485 1.459592 CGCCTGTGTTGCAGTACTTAC 59.540 52.381 0.00 0.00 43.55 2.34
4651 10501 1.070615 TTCTAGCGCCTGTGTTGCA 59.929 52.632 2.29 0.00 0.00 4.08
4668 10518 5.335661 GCAACAATTGGATCCGTTTCTAGTT 60.336 40.000 10.83 2.84 0.00 2.24
4688 10538 6.377146 TGTTCCTCCTATCTAAAATTGGCAAC 59.623 38.462 0.00 0.00 0.00 4.17
4692 10542 6.547141 TGCATGTTCCTCCTATCTAAAATTGG 59.453 38.462 0.00 0.00 0.00 3.16
4701 10551 4.712476 ACTTGATGCATGTTCCTCCTATC 58.288 43.478 2.46 0.00 0.00 2.08
4757 10607 6.581166 TCCTACAAAATCGAATCGATATGACG 59.419 38.462 26.90 19.04 46.30 4.35
4798 10648 5.586243 TGCTAGATACATTCCTTTGAGCAAC 59.414 40.000 0.00 0.00 34.66 4.17
4800 10650 5.118990 GTGCTAGATACATTCCTTTGAGCA 58.881 41.667 0.00 0.00 35.18 4.26
4831 10681 8.576442 TGTCGCTGAAATGAATGTATCTAGATA 58.424 33.333 8.44 8.44 0.00 1.98
4844 10694 5.390461 CCGAAATTAGTTGTCGCTGAAATGA 60.390 40.000 0.00 0.00 33.46 2.57
4886 10736 4.434520 TCTTGACGTTGTGTGTCACATAA 58.565 39.130 9.31 10.12 45.42 1.90
4932 10782 2.051345 CGTGCGTTGAAGTTGGCC 60.051 61.111 0.00 0.00 0.00 5.36
4933 10783 1.368850 GTCGTGCGTTGAAGTTGGC 60.369 57.895 0.00 0.00 0.00 4.52
4934 10784 1.278637 GGTCGTGCGTTGAAGTTGG 59.721 57.895 0.00 0.00 0.00 3.77
4935 10785 1.278637 GGGTCGTGCGTTGAAGTTG 59.721 57.895 0.00 0.00 0.00 3.16
4936 10786 1.890510 GGGGTCGTGCGTTGAAGTT 60.891 57.895 0.00 0.00 0.00 2.66
4937 10787 2.280592 GGGGTCGTGCGTTGAAGT 60.281 61.111 0.00 0.00 0.00 3.01
4938 10788 1.440938 TTTGGGGTCGTGCGTTGAAG 61.441 55.000 0.00 0.00 0.00 3.02
4939 10789 0.820074 ATTTGGGGTCGTGCGTTGAA 60.820 50.000 0.00 0.00 0.00 2.69
4940 10790 1.228003 ATTTGGGGTCGTGCGTTGA 60.228 52.632 0.00 0.00 0.00 3.18
4941 10791 1.081509 CATTTGGGGTCGTGCGTTG 60.082 57.895 0.00 0.00 0.00 4.10
4942 10792 2.265182 CCATTTGGGGTCGTGCGTT 61.265 57.895 0.00 0.00 0.00 4.84
4943 10793 2.671619 CCATTTGGGGTCGTGCGT 60.672 61.111 0.00 0.00 0.00 5.24
4944 10794 2.671619 ACCATTTGGGGTCGTGCG 60.672 61.111 0.96 0.00 42.91 5.34
4950 10800 1.613255 CGTAGCAAGACCATTTGGGGT 60.613 52.381 0.96 0.00 46.02 4.95
4951 10801 1.094785 CGTAGCAAGACCATTTGGGG 58.905 55.000 0.96 0.00 42.91 4.96
4952 10802 1.821216 ACGTAGCAAGACCATTTGGG 58.179 50.000 0.96 0.00 44.81 4.12
4953 10803 2.159707 CGAACGTAGCAAGACCATTTGG 60.160 50.000 0.00 0.00 42.17 3.28
4954 10804 2.478894 ACGAACGTAGCAAGACCATTTG 59.521 45.455 0.00 0.00 0.00 2.32
4955 10805 2.762745 ACGAACGTAGCAAGACCATTT 58.237 42.857 0.00 0.00 0.00 2.32
4956 10806 2.450609 ACGAACGTAGCAAGACCATT 57.549 45.000 0.00 0.00 0.00 3.16
4957 10807 2.450609 AACGAACGTAGCAAGACCAT 57.549 45.000 0.00 0.00 0.00 3.55
4958 10808 1.862201 CAAACGAACGTAGCAAGACCA 59.138 47.619 0.00 0.00 0.00 4.02
4959 10809 1.193874 CCAAACGAACGTAGCAAGACC 59.806 52.381 0.00 0.00 0.00 3.85
4960 10810 1.193874 CCCAAACGAACGTAGCAAGAC 59.806 52.381 0.00 0.00 0.00 3.01
4961 10811 1.504359 CCCAAACGAACGTAGCAAGA 58.496 50.000 0.00 0.00 0.00 3.02
4962 10812 0.515564 CCCCAAACGAACGTAGCAAG 59.484 55.000 0.00 0.00 0.00 4.01
4963 10813 0.885596 CCCCCAAACGAACGTAGCAA 60.886 55.000 0.00 0.00 0.00 3.91
4964 10814 1.301874 CCCCCAAACGAACGTAGCA 60.302 57.895 0.00 0.00 0.00 3.49
4965 10815 0.037419 TACCCCCAAACGAACGTAGC 60.037 55.000 0.00 0.00 0.00 3.58
4966 10816 2.453983 TTACCCCCAAACGAACGTAG 57.546 50.000 0.00 0.00 0.00 3.51
4967 10817 2.488952 GTTTACCCCCAAACGAACGTA 58.511 47.619 0.00 0.00 0.00 3.57
4968 10818 1.308047 GTTTACCCCCAAACGAACGT 58.692 50.000 0.00 0.00 0.00 3.99
4974 10824 1.202794 TCTGTCCGTTTACCCCCAAAC 60.203 52.381 0.00 0.00 35.49 2.93
4975 10825 1.138568 TCTGTCCGTTTACCCCCAAA 58.861 50.000 0.00 0.00 0.00 3.28
4976 10826 1.138568 TTCTGTCCGTTTACCCCCAA 58.861 50.000 0.00 0.00 0.00 4.12
4977 10827 0.397564 GTTCTGTCCGTTTACCCCCA 59.602 55.000 0.00 0.00 0.00 4.96
4978 10828 0.397564 TGTTCTGTCCGTTTACCCCC 59.602 55.000 0.00 0.00 0.00 5.40
4979 10829 2.081462 CATGTTCTGTCCGTTTACCCC 58.919 52.381 0.00 0.00 0.00 4.95
4980 10830 1.467342 GCATGTTCTGTCCGTTTACCC 59.533 52.381 0.00 0.00 0.00 3.69
4981 10831 1.467342 GGCATGTTCTGTCCGTTTACC 59.533 52.381 0.00 0.00 0.00 2.85
4982 10832 1.127951 CGGCATGTTCTGTCCGTTTAC 59.872 52.381 0.00 0.00 38.74 2.01
4983 10833 1.434555 CGGCATGTTCTGTCCGTTTA 58.565 50.000 0.00 0.00 38.74 2.01
4984 10834 2.244000 CGGCATGTTCTGTCCGTTT 58.756 52.632 0.00 0.00 38.74 3.60
4985 10835 3.966215 CGGCATGTTCTGTCCGTT 58.034 55.556 0.00 0.00 38.74 4.44
4986 10836 2.741092 ACGGCATGTTCTGTCCGT 59.259 55.556 6.97 6.97 46.14 4.69
4987 10837 3.474806 GACGGCATGTTCTGTCCG 58.525 61.111 5.75 5.75 44.75 4.79
4989 10839 0.517316 GTTGGACGGCATGTTCTGTC 59.483 55.000 0.00 4.23 40.68 3.51
4990 10840 0.889186 GGTTGGACGGCATGTTCTGT 60.889 55.000 0.00 0.00 0.00 3.41
4991 10841 1.875963 GGTTGGACGGCATGTTCTG 59.124 57.895 0.00 0.00 0.00 3.02
4992 10842 1.671054 CGGTTGGACGGCATGTTCT 60.671 57.895 0.00 0.00 0.00 3.01
4993 10843 2.867472 CGGTTGGACGGCATGTTC 59.133 61.111 0.00 0.00 0.00 3.18
4994 10844 3.361977 GCGGTTGGACGGCATGTT 61.362 61.111 0.00 0.00 42.97 2.71
5002 10852 4.643387 ACTGCCAGGCGGTTGGAC 62.643 66.667 21.39 0.00 46.97 4.02
5008 10858 2.594303 TGTTGAACTGCCAGGCGG 60.594 61.111 19.77 19.77 41.29 6.13
5009 10859 1.518056 ATGTGTTGAACTGCCAGGCG 61.518 55.000 7.03 4.22 0.00 5.52
5010 10860 0.242017 GATGTGTTGAACTGCCAGGC 59.758 55.000 3.66 3.66 0.00 4.85
5011 10861 1.901591 AGATGTGTTGAACTGCCAGG 58.098 50.000 0.00 0.00 0.00 4.45
5012 10862 3.144506 AGAAGATGTGTTGAACTGCCAG 58.855 45.455 0.00 0.00 0.00 4.85
5013 10863 3.141398 GAGAAGATGTGTTGAACTGCCA 58.859 45.455 0.00 0.00 0.00 4.92
5014 10864 3.141398 TGAGAAGATGTGTTGAACTGCC 58.859 45.455 0.00 0.00 0.00 4.85
5015 10865 4.818534 TTGAGAAGATGTGTTGAACTGC 57.181 40.909 0.00 0.00 0.00 4.40
5016 10866 8.777413 TCTATTTTGAGAAGATGTGTTGAACTG 58.223 33.333 0.00 0.00 0.00 3.16
5017 10867 8.778358 GTCTATTTTGAGAAGATGTGTTGAACT 58.222 33.333 0.00 0.00 0.00 3.01
5018 10868 8.778358 AGTCTATTTTGAGAAGATGTGTTGAAC 58.222 33.333 0.00 0.00 0.00 3.18
5019 10869 8.908786 AGTCTATTTTGAGAAGATGTGTTGAA 57.091 30.769 0.00 0.00 0.00 2.69
5020 10870 8.777413 CAAGTCTATTTTGAGAAGATGTGTTGA 58.223 33.333 0.00 0.00 0.00 3.18
5021 10871 7.536622 GCAAGTCTATTTTGAGAAGATGTGTTG 59.463 37.037 0.00 0.00 0.00 3.33
5022 10872 7.571983 CGCAAGTCTATTTTGAGAAGATGTGTT 60.572 37.037 0.00 0.00 0.00 3.32
5023 10873 6.128445 CGCAAGTCTATTTTGAGAAGATGTGT 60.128 38.462 0.00 0.00 0.00 3.72
5024 10874 6.246449 CGCAAGTCTATTTTGAGAAGATGTG 58.754 40.000 0.00 0.00 0.00 3.21
5025 10875 5.163814 GCGCAAGTCTATTTTGAGAAGATGT 60.164 40.000 0.30 0.00 41.68 3.06
5026 10876 5.064452 AGCGCAAGTCTATTTTGAGAAGATG 59.936 40.000 11.47 0.00 41.68 2.90
5027 10877 5.181748 AGCGCAAGTCTATTTTGAGAAGAT 58.818 37.500 11.47 0.00 41.68 2.40
5028 10878 4.569943 AGCGCAAGTCTATTTTGAGAAGA 58.430 39.130 11.47 0.00 41.68 2.87
5029 10879 4.629200 AGAGCGCAAGTCTATTTTGAGAAG 59.371 41.667 11.47 0.00 41.68 2.85
5030 10880 4.389992 CAGAGCGCAAGTCTATTTTGAGAA 59.610 41.667 11.47 0.00 41.68 2.87
5149 11015 1.504359 GTCATCCACGTTTCGTCCAA 58.496 50.000 0.00 0.00 38.32 3.53
5151 11017 0.320073 TGGTCATCCACGTTTCGTCC 60.320 55.000 0.00 0.00 38.32 4.79
5170 11036 4.101448 GAGGGCACAGCGGTGGAT 62.101 66.667 20.20 0.00 45.38 3.41
5191 11057 0.620556 ATGAGTGTGGTGGGATGACC 59.379 55.000 0.00 0.00 40.81 4.02
5195 11061 1.210478 GTGCTATGAGTGTGGTGGGAT 59.790 52.381 0.00 0.00 0.00 3.85
5209 11075 1.084370 GCGGCGTTTCAGAGTGCTAT 61.084 55.000 9.37 0.00 0.00 2.97
5381 11253 0.969149 TCGGCTTGTCTGACACTGAT 59.031 50.000 10.56 0.00 0.00 2.90
5394 11266 0.250770 GGAGAAACCCTTGTCGGCTT 60.251 55.000 0.00 0.00 0.00 4.35
5406 11278 1.133606 TGTTCTGGGGTTGGGAGAAAC 60.134 52.381 0.00 0.00 0.00 2.78
5446 11318 1.382692 GCAAGCTGGATGGAAGGCTC 61.383 60.000 0.00 0.00 33.63 4.70
5539 11411 2.785679 CGCTTCCATTTTTCGTCATCC 58.214 47.619 0.00 0.00 0.00 3.51
5542 11414 0.947960 TGCGCTTCCATTTTTCGTCA 59.052 45.000 9.73 0.00 0.00 4.35
5594 11468 3.025262 GACGATGAAGGTAGTTCCCTCT 58.975 50.000 0.00 0.00 36.75 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.