Multiple sequence alignment - TraesCS2A01G410400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G410400 chr2A 100.000 7402 0 0 1 7402 668074115 668066714 0.000000e+00 13670.0
1 TraesCS2A01G410400 chr2A 99.324 296 2 0 1 296 256198966 256198671 3.040000e-148 536.0
2 TraesCS2A01G410400 chr2A 97.000 300 8 1 1 300 662940338 662940636 3.080000e-138 503.0
3 TraesCS2A01G410400 chr2A 92.045 176 14 0 1168 1343 668086275 668086100 1.590000e-61 248.0
4 TraesCS2A01G410400 chr2B 93.239 5502 261 58 1854 7317 616499015 616493587 0.000000e+00 7997.0
5 TraesCS2A01G410400 chr2B 91.598 1095 57 14 663 1739 616500276 616499199 0.000000e+00 1480.0
6 TraesCS2A01G410400 chr2D 95.797 4854 168 22 1768 6606 522995075 522990243 0.000000e+00 7801.0
7 TraesCS2A01G410400 chr2D 89.437 871 66 15 663 1522 522996082 522995227 0.000000e+00 1075.0
8 TraesCS2A01G410400 chr2D 88.509 644 31 22 6629 7263 522990186 522989577 0.000000e+00 739.0
9 TraesCS2A01G410400 chr2D 92.697 178 13 0 1166 1343 522999918 522999741 2.650000e-64 257.0
10 TraesCS2A01G410400 chr2D 93.243 148 8 1 1598 1743 522995212 522995065 4.500000e-52 217.0
11 TraesCS2A01G410400 chr2D 93.478 46 3 0 7357 7402 360272835 360272880 1.330000e-07 69.4
12 TraesCS2A01G410400 chr3B 94.521 365 14 4 1 359 787251306 787251670 6.490000e-155 558.0
13 TraesCS2A01G410400 chr3A 95.942 345 9 4 4 343 363952050 363951706 8.390000e-154 555.0
14 TraesCS2A01G410400 chr5A 99.662 296 1 0 1 296 139484814 139485109 6.530000e-150 542.0
15 TraesCS2A01G410400 chr4B 98.986 296 3 0 1 296 429597660 429597365 1.410000e-146 531.0
16 TraesCS2A01G410400 chr6B 98.649 296 4 0 1 296 21194381 21194086 6.580000e-145 525.0
17 TraesCS2A01G410400 chr6B 81.408 355 64 2 6025 6378 226400556 226400203 9.400000e-74 289.0
18 TraesCS2A01G410400 chr4A 98.316 297 4 1 1 296 95155966 95155670 3.060000e-143 520.0
19 TraesCS2A01G410400 chr6A 96.333 300 10 1 1 300 393232942 393232644 6.670000e-135 492.0
20 TraesCS2A01G410400 chr6A 97.222 36 1 0 1519 1554 55224007 55224042 2.230000e-05 62.1
21 TraesCS2A01G410400 chr7D 78.466 339 73 0 6019 6357 580575795 580576133 9.670000e-54 222.0
22 TraesCS2A01G410400 chr7D 95.238 42 2 0 7357 7398 634079016 634079057 4.790000e-07 67.6
23 TraesCS2A01G410400 chr7A 78.171 339 74 0 6019 6357 672075308 672075646 4.500000e-52 217.0
24 TraesCS2A01G410400 chr1D 95.652 46 2 0 7357 7402 236094306 236094261 2.860000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G410400 chr2A 668066714 668074115 7401 True 13670.0 13670 100.0000 1 7402 1 chr2A.!!$R2 7401
1 TraesCS2A01G410400 chr2B 616493587 616500276 6689 True 4738.5 7997 92.4185 663 7317 2 chr2B.!!$R1 6654
2 TraesCS2A01G410400 chr2D 522989577 522999918 10341 True 2017.8 7801 91.9366 663 7263 5 chr2D.!!$R1 6600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
254 255 0.031449 CGAGGGGCTTTTTCGCAAAA 59.969 50.000 0.00 0.0 0.00 2.44 F
590 591 0.179045 AAAGTTGCCAGCGTCTGTCT 60.179 50.000 6.19 0.0 0.00 3.41 F
1379 4567 0.041090 TTTTGGGCCCTTCCTCATCC 59.959 55.000 25.70 0.0 34.39 3.51 F
2038 5308 1.270839 TGTGGTTCAGAAGGCTACAGC 60.271 52.381 0.00 0.0 41.14 4.40 F
3147 6431 0.391597 AAAGTCGAAAGTGAGCCCGA 59.608 50.000 0.00 0.0 0.00 5.14 F
3527 6811 0.610174 TCAGAGAGCTTCCGTTGCAT 59.390 50.000 0.00 0.0 0.00 3.96 F
4998 8282 0.669619 CAACTGCTGTGATGGTTGCA 59.330 50.000 0.00 0.0 33.86 4.08 F
5941 9228 0.601046 ACTGATGGTGCTGTCACACG 60.601 55.000 4.98 0.0 44.87 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1171 4359 0.041982 ACCACCTTCTCCTCCTCCTC 59.958 60.0 0.00 0.00 0.00 3.71 R
1971 5241 0.472161 GGGCCACCACCCCTTTAAAA 60.472 55.0 4.39 0.00 45.00 1.52 R
3147 6431 0.400594 AAAAAGGGCTCCGTGTAGCT 59.599 50.0 0.00 0.00 42.37 3.32 R
3527 6811 0.908910 TCCGCCTCTTCAATAGCCAA 59.091 50.0 0.00 0.00 0.00 4.52 R
4597 7881 0.033796 ATGTTGCCCTGACATGGAGG 60.034 55.0 0.20 6.13 36.43 4.30 R
5408 8693 0.108186 TCTTGGCATGCTCCACTACG 60.108 55.0 18.92 0.00 35.50 3.51 R
6396 9690 0.032815 GACGGCCCTCTTCTCTATGC 59.967 60.0 0.00 0.00 0.00 3.14 R
7103 10451 0.032952 CCTGACGAAGAACCGGTTGA 59.967 55.0 27.87 0.00 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.257933 CTGCACCAAAGAGCCGTC 58.742 61.111 0.00 0.00 0.00 4.79
18 19 1.302033 CTGCACCAAAGAGCCGTCT 60.302 57.895 0.00 0.00 32.81 4.18
19 20 1.572085 CTGCACCAAAGAGCCGTCTG 61.572 60.000 0.00 0.00 31.37 3.51
32 33 3.637273 GTCTGGGCCGACCACCTT 61.637 66.667 14.89 0.00 46.80 3.50
33 34 3.319198 TCTGGGCCGACCACCTTC 61.319 66.667 0.00 0.00 46.80 3.46
34 35 4.760047 CTGGGCCGACCACCTTCG 62.760 72.222 0.00 0.00 46.80 3.79
88 89 1.876714 CACGACGGAATGGGCGTAG 60.877 63.158 0.00 0.00 34.93 3.51
122 123 3.692257 CGCAGGAGGAATGGATAAGAT 57.308 47.619 0.00 0.00 0.00 2.40
124 125 3.007290 CGCAGGAGGAATGGATAAGATGA 59.993 47.826 0.00 0.00 0.00 2.92
126 127 4.564041 CAGGAGGAATGGATAAGATGACG 58.436 47.826 0.00 0.00 0.00 4.35
127 128 3.580458 AGGAGGAATGGATAAGATGACGG 59.420 47.826 0.00 0.00 0.00 4.79
128 129 3.307059 GGAGGAATGGATAAGATGACGGG 60.307 52.174 0.00 0.00 0.00 5.28
129 130 3.578716 GAGGAATGGATAAGATGACGGGA 59.421 47.826 0.00 0.00 0.00 5.14
131 132 3.307059 GGAATGGATAAGATGACGGGAGG 60.307 52.174 0.00 0.00 0.00 4.30
132 133 2.767644 TGGATAAGATGACGGGAGGA 57.232 50.000 0.00 0.00 0.00 3.71
133 134 2.317040 TGGATAAGATGACGGGAGGAC 58.683 52.381 0.00 0.00 0.00 3.85
134 135 2.317040 GGATAAGATGACGGGAGGACA 58.683 52.381 0.00 0.00 0.00 4.02
135 136 2.297597 GGATAAGATGACGGGAGGACAG 59.702 54.545 0.00 0.00 0.00 3.51
136 137 1.112113 TAAGATGACGGGAGGACAGC 58.888 55.000 0.00 0.00 0.00 4.40
137 138 1.949847 AAGATGACGGGAGGACAGCG 61.950 60.000 0.00 0.00 33.46 5.18
138 139 2.362503 ATGACGGGAGGACAGCGA 60.363 61.111 0.00 0.00 0.00 4.93
139 140 2.343163 GATGACGGGAGGACAGCGAG 62.343 65.000 0.00 0.00 0.00 5.03
140 141 3.063084 GACGGGAGGACAGCGAGT 61.063 66.667 0.00 0.00 0.00 4.18
141 142 3.343788 GACGGGAGGACAGCGAGTG 62.344 68.421 0.00 0.00 0.00 3.51
143 144 2.636412 CGGGAGGACAGCGAGTGAA 61.636 63.158 0.00 0.00 0.00 3.18
144 145 1.671742 GGGAGGACAGCGAGTGAAA 59.328 57.895 0.00 0.00 0.00 2.69
146 147 1.339151 GGGAGGACAGCGAGTGAAATT 60.339 52.381 0.00 0.00 0.00 1.82
147 148 2.003301 GGAGGACAGCGAGTGAAATTC 58.997 52.381 0.00 0.00 0.00 2.17
148 149 2.612972 GGAGGACAGCGAGTGAAATTCA 60.613 50.000 0.00 0.00 0.00 2.57
149 150 3.067106 GAGGACAGCGAGTGAAATTCAA 58.933 45.455 0.00 0.00 0.00 2.69
150 151 3.476552 AGGACAGCGAGTGAAATTCAAA 58.523 40.909 0.00 0.00 0.00 2.69
152 153 4.083110 AGGACAGCGAGTGAAATTCAAATG 60.083 41.667 0.00 0.00 0.00 2.32
153 154 4.083324 GGACAGCGAGTGAAATTCAAATGA 60.083 41.667 0.00 0.00 0.00 2.57
154 155 5.039480 ACAGCGAGTGAAATTCAAATGAG 57.961 39.130 0.00 0.00 0.00 2.90
155 156 4.516698 ACAGCGAGTGAAATTCAAATGAGT 59.483 37.500 0.00 0.00 0.00 3.41
158 159 5.700832 AGCGAGTGAAATTCAAATGAGTACA 59.299 36.000 0.00 0.00 0.00 2.90
160 161 6.537566 CGAGTGAAATTCAAATGAGTACAGG 58.462 40.000 0.00 0.00 0.00 4.00
161 162 6.402550 CGAGTGAAATTCAAATGAGTACAGGG 60.403 42.308 0.00 0.00 0.00 4.45
162 163 5.711976 AGTGAAATTCAAATGAGTACAGGGG 59.288 40.000 0.00 0.00 0.00 4.79
164 165 6.015434 GTGAAATTCAAATGAGTACAGGGGTT 60.015 38.462 0.00 0.00 0.00 4.11
165 166 6.553100 TGAAATTCAAATGAGTACAGGGGTTT 59.447 34.615 0.00 0.00 0.00 3.27
167 168 6.994421 ATTCAAATGAGTACAGGGGTTTTT 57.006 33.333 0.00 0.00 0.00 1.94
194 195 9.982291 TTGCAAAATGAAACGTTATATAGAGAC 57.018 29.630 0.00 0.00 0.00 3.36
195 196 8.609176 TGCAAAATGAAACGTTATATAGAGACC 58.391 33.333 0.00 0.00 0.00 3.85
196 197 8.068380 GCAAAATGAAACGTTATATAGAGACCC 58.932 37.037 0.00 0.00 0.00 4.46
197 198 9.104965 CAAAATGAAACGTTATATAGAGACCCA 57.895 33.333 0.00 0.00 0.00 4.51
201 202 8.701908 TGAAACGTTATATAGAGACCCATACT 57.298 34.615 0.00 0.00 0.00 2.12
202 203 9.797642 TGAAACGTTATATAGAGACCCATACTA 57.202 33.333 0.00 0.00 0.00 1.82
211 212 4.695606 AGAGACCCATACTAAAACAGGGA 58.304 43.478 2.29 0.00 42.25 4.20
213 214 4.436079 AGACCCATACTAAAACAGGGACT 58.564 43.478 2.29 0.00 42.25 3.85
224 225 3.495729 AGGGACTGCGGGTTGATT 58.504 55.556 0.00 0.00 37.18 2.57
226 227 0.112412 AGGGACTGCGGGTTGATTTT 59.888 50.000 0.00 0.00 37.18 1.82
227 228 0.966179 GGGACTGCGGGTTGATTTTT 59.034 50.000 0.00 0.00 0.00 1.94
247 248 6.422344 TTTTTATAAACCGAGGGGCTTTTT 57.578 33.333 0.00 0.00 36.48 1.94
248 249 5.648178 TTTATAAACCGAGGGGCTTTTTC 57.352 39.130 0.00 0.00 36.48 2.29
249 250 1.525941 TAAACCGAGGGGCTTTTTCG 58.474 50.000 0.00 0.00 36.48 3.46
250 251 1.802337 AAACCGAGGGGCTTTTTCGC 61.802 55.000 0.00 0.00 36.48 4.70
251 252 2.671619 CCGAGGGGCTTTTTCGCA 60.672 61.111 0.00 0.00 33.25 5.10
252 253 2.265182 CCGAGGGGCTTTTTCGCAA 61.265 57.895 0.00 0.00 33.25 4.85
253 254 1.657556 CGAGGGGCTTTTTCGCAAA 59.342 52.632 0.00 0.00 0.00 3.68
254 255 0.031449 CGAGGGGCTTTTTCGCAAAA 59.969 50.000 0.00 0.00 0.00 2.44
255 256 1.497991 GAGGGGCTTTTTCGCAAAAC 58.502 50.000 0.00 0.00 0.00 2.43
256 257 0.249280 AGGGGCTTTTTCGCAAAACG 60.249 50.000 0.00 0.00 45.62 3.60
257 258 1.562691 GGGCTTTTTCGCAAAACGC 59.437 52.632 11.62 11.62 42.77 4.84
259 260 2.292803 GCTTTTTCGCAAAACGCCA 58.707 47.368 9.91 0.00 39.06 5.69
260 261 0.229500 GCTTTTTCGCAAAACGCCAG 59.771 50.000 9.91 1.45 39.06 4.85
261 262 0.229500 CTTTTTCGCAAAACGCCAGC 59.771 50.000 0.00 0.00 43.23 4.85
267 268 2.127758 CAAAACGCCAGCGACGAC 60.128 61.111 20.32 0.00 42.83 4.34
268 269 2.586635 AAAACGCCAGCGACGACA 60.587 55.556 20.32 0.00 42.83 4.35
269 270 2.594962 AAAACGCCAGCGACGACAG 61.595 57.895 20.32 0.00 42.83 3.51
270 271 2.964438 AAAACGCCAGCGACGACAGA 62.964 55.000 20.32 0.00 42.83 3.41
271 272 4.702081 ACGCCAGCGACGACAGAC 62.702 66.667 20.32 0.00 42.83 3.51
273 274 4.400109 GCCAGCGACGACAGACGA 62.400 66.667 0.00 0.00 45.77 4.20
274 275 2.502080 CCAGCGACGACAGACGAC 60.502 66.667 0.00 0.00 45.77 4.34
275 276 2.502080 CAGCGACGACAGACGACC 60.502 66.667 0.00 0.00 45.77 4.79
276 277 2.976350 AGCGACGACAGACGACCA 60.976 61.111 0.00 0.00 45.77 4.02
278 279 2.962827 GCGACGACAGACGACCAGA 61.963 63.158 0.00 0.00 45.77 3.86
279 280 1.572941 CGACGACAGACGACCAGAA 59.427 57.895 0.00 0.00 45.77 3.02
280 281 0.452950 CGACGACAGACGACCAGAAG 60.453 60.000 0.00 0.00 45.77 2.85
282 283 1.285950 CGACAGACGACCAGAAGCA 59.714 57.895 0.00 0.00 45.77 3.91
283 284 1.004277 CGACAGACGACCAGAAGCAC 61.004 60.000 0.00 0.00 45.77 4.40
284 285 0.315568 GACAGACGACCAGAAGCACT 59.684 55.000 0.00 0.00 0.00 4.40
285 286 0.315568 ACAGACGACCAGAAGCACTC 59.684 55.000 0.00 0.00 0.00 3.51
286 287 0.389166 CAGACGACCAGAAGCACTCC 60.389 60.000 0.00 0.00 0.00 3.85
287 288 1.444553 GACGACCAGAAGCACTCCG 60.445 63.158 0.00 0.00 0.00 4.63
288 289 2.143594 GACGACCAGAAGCACTCCGT 62.144 60.000 0.00 0.00 0.00 4.69
289 290 1.734477 CGACCAGAAGCACTCCGTG 60.734 63.158 0.00 0.00 36.51 4.94
403 404 7.089538 AGATAAGAGATGTGACTATTGATGCG 58.910 38.462 0.00 0.00 0.00 4.73
404 405 3.987547 AGAGATGTGACTATTGATGCGG 58.012 45.455 0.00 0.00 0.00 5.69
405 406 3.062763 GAGATGTGACTATTGATGCGGG 58.937 50.000 0.00 0.00 0.00 6.13
406 407 2.435805 AGATGTGACTATTGATGCGGGT 59.564 45.455 0.00 0.00 0.00 5.28
407 408 2.779755 TGTGACTATTGATGCGGGTT 57.220 45.000 0.00 0.00 0.00 4.11
408 409 3.066291 TGTGACTATTGATGCGGGTTT 57.934 42.857 0.00 0.00 0.00 3.27
409 410 3.006940 TGTGACTATTGATGCGGGTTTC 58.993 45.455 0.00 0.00 0.00 2.78
411 412 3.627577 GTGACTATTGATGCGGGTTTCAT 59.372 43.478 0.00 0.00 0.00 2.57
414 415 5.883115 TGACTATTGATGCGGGTTTCATAAA 59.117 36.000 0.00 0.00 0.00 1.40
416 417 6.795399 ACTATTGATGCGGGTTTCATAAAAG 58.205 36.000 0.00 0.00 0.00 2.27
418 419 3.691575 TGATGCGGGTTTCATAAAAGGA 58.308 40.909 0.00 0.00 0.00 3.36
419 420 3.442273 TGATGCGGGTTTCATAAAAGGAC 59.558 43.478 0.00 0.00 0.00 3.85
420 421 2.865079 TGCGGGTTTCATAAAAGGACA 58.135 42.857 0.00 0.00 0.00 4.02
422 423 3.637229 TGCGGGTTTCATAAAAGGACAAA 59.363 39.130 0.00 0.00 0.00 2.83
423 424 4.099573 TGCGGGTTTCATAAAAGGACAAAA 59.900 37.500 0.00 0.00 0.00 2.44
425 426 5.699001 GCGGGTTTCATAAAAGGACAAAAAT 59.301 36.000 0.00 0.00 0.00 1.82
426 427 6.128661 GCGGGTTTCATAAAAGGACAAAAATC 60.129 38.462 0.00 0.00 0.00 2.17
427 428 7.151976 CGGGTTTCATAAAAGGACAAAAATCT 58.848 34.615 0.00 0.00 0.00 2.40
429 430 9.337396 GGGTTTCATAAAAGGACAAAAATCTTT 57.663 29.630 0.00 0.00 32.77 2.52
434 435 9.187455 TCATAAAAGGACAAAAATCTTTTACGC 57.813 29.630 8.91 0.00 42.20 4.42
435 436 6.505039 AAAAGGACAAAAATCTTTTACGCG 57.495 33.333 3.53 3.53 38.47 6.01
436 437 5.427036 AAGGACAAAAATCTTTTACGCGA 57.573 34.783 15.93 0.00 0.00 5.87
437 438 5.030874 AGGACAAAAATCTTTTACGCGAG 57.969 39.130 15.93 0.00 0.00 5.03
438 439 4.083484 AGGACAAAAATCTTTTACGCGAGG 60.083 41.667 15.93 0.00 0.00 4.63
439 440 4.155310 ACAAAAATCTTTTACGCGAGGG 57.845 40.909 15.93 0.00 0.00 4.30
440 441 3.057806 ACAAAAATCTTTTACGCGAGGGG 60.058 43.478 15.93 0.00 0.00 4.79
441 442 1.746470 AAATCTTTTACGCGAGGGGG 58.254 50.000 15.93 0.00 0.00 5.40
445 446 1.072015 TCTTTTACGCGAGGGGGAAAA 59.928 47.619 15.93 8.17 0.00 2.29
446 447 1.881324 CTTTTACGCGAGGGGGAAAAA 59.119 47.619 15.93 6.68 0.00 1.94
448 449 1.741528 TTACGCGAGGGGGAAAAATC 58.258 50.000 15.93 0.00 0.00 2.17
449 450 0.614294 TACGCGAGGGGGAAAAATCA 59.386 50.000 15.93 0.00 0.00 2.57
450 451 0.250989 ACGCGAGGGGGAAAAATCAA 60.251 50.000 15.93 0.00 0.00 2.57
452 453 1.271102 CGCGAGGGGGAAAAATCAAAA 59.729 47.619 0.00 0.00 0.00 2.44
453 454 2.683968 GCGAGGGGGAAAAATCAAAAC 58.316 47.619 0.00 0.00 0.00 2.43
454 455 2.924880 GCGAGGGGGAAAAATCAAAACG 60.925 50.000 0.00 0.00 0.00 3.60
457 458 4.556233 GAGGGGGAAAAATCAAAACGAAG 58.444 43.478 0.00 0.00 0.00 3.79
460 461 4.279922 GGGGGAAAAATCAAAACGAAGAGA 59.720 41.667 0.00 0.00 0.00 3.10
462 463 5.461526 GGGAAAAATCAAAACGAAGAGAGG 58.538 41.667 0.00 0.00 0.00 3.69
463 464 5.240844 GGGAAAAATCAAAACGAAGAGAGGA 59.759 40.000 0.00 0.00 0.00 3.71
464 465 6.238925 GGGAAAAATCAAAACGAAGAGAGGAA 60.239 38.462 0.00 0.00 0.00 3.36
467 468 6.793492 AAATCAAAACGAAGAGAGGAAGAG 57.207 37.500 0.00 0.00 0.00 2.85
468 469 4.258702 TCAAAACGAAGAGAGGAAGAGG 57.741 45.455 0.00 0.00 0.00 3.69
469 470 2.739379 CAAAACGAAGAGAGGAAGAGGC 59.261 50.000 0.00 0.00 0.00 4.70
470 471 1.633774 AACGAAGAGAGGAAGAGGCA 58.366 50.000 0.00 0.00 0.00 4.75
471 472 1.181786 ACGAAGAGAGGAAGAGGCAG 58.818 55.000 0.00 0.00 0.00 4.85
473 474 1.859302 GAAGAGAGGAAGAGGCAGGA 58.141 55.000 0.00 0.00 0.00 3.86
474 475 2.183679 GAAGAGAGGAAGAGGCAGGAA 58.816 52.381 0.00 0.00 0.00 3.36
476 477 1.360852 AGAGAGGAAGAGGCAGGAAGA 59.639 52.381 0.00 0.00 0.00 2.87
477 478 1.756538 GAGAGGAAGAGGCAGGAAGAG 59.243 57.143 0.00 0.00 0.00 2.85
479 480 0.620121 AGGAAGAGGCAGGAAGAGGG 60.620 60.000 0.00 0.00 0.00 4.30
483 484 0.617249 AGAGGCAGGAAGAGGGAGTG 60.617 60.000 0.00 0.00 0.00 3.51
484 485 0.907230 GAGGCAGGAAGAGGGAGTGT 60.907 60.000 0.00 0.00 0.00 3.55
486 487 1.484444 GGCAGGAAGAGGGAGTGTGT 61.484 60.000 0.00 0.00 0.00 3.72
487 488 1.267121 GCAGGAAGAGGGAGTGTGTA 58.733 55.000 0.00 0.00 0.00 2.90
489 490 2.354203 GCAGGAAGAGGGAGTGTGTAAG 60.354 54.545 0.00 0.00 0.00 2.34
490 491 3.165875 CAGGAAGAGGGAGTGTGTAAGA 58.834 50.000 0.00 0.00 0.00 2.10
491 492 3.772025 CAGGAAGAGGGAGTGTGTAAGAT 59.228 47.826 0.00 0.00 0.00 2.40
492 493 4.223923 CAGGAAGAGGGAGTGTGTAAGATT 59.776 45.833 0.00 0.00 0.00 2.40
493 494 4.223923 AGGAAGAGGGAGTGTGTAAGATTG 59.776 45.833 0.00 0.00 0.00 2.67
494 495 4.508662 GAAGAGGGAGTGTGTAAGATTGG 58.491 47.826 0.00 0.00 0.00 3.16
495 496 3.791320 AGAGGGAGTGTGTAAGATTGGA 58.209 45.455 0.00 0.00 0.00 3.53
497 498 2.233922 AGGGAGTGTGTAAGATTGGACG 59.766 50.000 0.00 0.00 0.00 4.79
501 502 3.926616 AGTGTGTAAGATTGGACGAAGG 58.073 45.455 0.00 0.00 0.00 3.46
502 503 3.576982 AGTGTGTAAGATTGGACGAAGGA 59.423 43.478 0.00 0.00 0.00 3.36
503 504 3.678548 GTGTGTAAGATTGGACGAAGGAC 59.321 47.826 0.00 0.00 0.00 3.85
514 515 3.058160 GAAGGACGGACGGACGGA 61.058 66.667 6.00 0.00 38.39 4.69
518 519 4.157958 GACGGACGGACGGACGAG 62.158 72.222 15.02 2.13 38.39 4.18
519 520 4.687215 ACGGACGGACGGACGAGA 62.687 66.667 15.02 0.00 38.39 4.04
520 521 3.862402 CGGACGGACGGACGAGAG 61.862 72.222 8.01 0.00 37.61 3.20
521 522 2.435586 GGACGGACGGACGAGAGA 60.436 66.667 8.01 0.00 37.61 3.10
522 523 2.748843 GGACGGACGGACGAGAGAC 61.749 68.421 8.01 0.00 37.61 3.36
523 524 2.745492 ACGGACGGACGAGAGACC 60.745 66.667 8.01 0.00 42.66 3.85
529 530 3.816388 GGACGAGAGACCGGAGAG 58.184 66.667 9.46 0.00 35.97 3.20
530 531 1.221293 GGACGAGAGACCGGAGAGA 59.779 63.158 9.46 0.00 35.97 3.10
531 532 0.812412 GGACGAGAGACCGGAGAGAG 60.812 65.000 9.46 0.00 35.97 3.20
532 533 0.812412 GACGAGAGACCGGAGAGAGG 60.812 65.000 9.46 0.00 0.00 3.69
533 534 1.266160 ACGAGAGACCGGAGAGAGGA 61.266 60.000 9.46 0.00 0.00 3.71
535 536 1.679336 CGAGAGACCGGAGAGAGGAAA 60.679 57.143 9.46 0.00 0.00 3.13
537 538 1.636519 AGAGACCGGAGAGAGGAAAGA 59.363 52.381 9.46 0.00 0.00 2.52
538 539 2.243736 AGAGACCGGAGAGAGGAAAGAT 59.756 50.000 9.46 0.00 0.00 2.40
541 542 2.498078 GACCGGAGAGAGGAAAGATTGT 59.502 50.000 9.46 0.00 0.00 2.71
542 543 2.234908 ACCGGAGAGAGGAAAGATTGTG 59.765 50.000 9.46 0.00 0.00 3.33
543 544 2.419297 CCGGAGAGAGGAAAGATTGTGG 60.419 54.545 0.00 0.00 0.00 4.17
547 548 2.087646 GAGAGGAAAGATTGTGGTGGC 58.912 52.381 0.00 0.00 0.00 5.01
549 550 0.482446 AGGAAAGATTGTGGTGGCCA 59.518 50.000 0.00 0.00 0.00 5.36
559 560 4.692475 GGTGGCCACGCGTAGGTT 62.692 66.667 29.08 0.00 0.00 3.50
560 561 2.667199 GTGGCCACGCGTAGGTTT 60.667 61.111 22.49 0.00 0.00 3.27
561 562 1.374505 GTGGCCACGCGTAGGTTTA 60.375 57.895 22.49 4.25 0.00 2.01
562 563 0.741927 GTGGCCACGCGTAGGTTTAT 60.742 55.000 22.49 0.00 0.00 1.40
564 565 1.202440 TGGCCACGCGTAGGTTTATAG 60.202 52.381 13.44 0.00 0.00 1.31
567 568 2.537214 GCCACGCGTAGGTTTATAGTTC 59.463 50.000 13.44 0.00 0.00 3.01
568 569 3.772932 CCACGCGTAGGTTTATAGTTCA 58.227 45.455 13.44 0.00 0.00 3.18
569 570 4.365723 CCACGCGTAGGTTTATAGTTCAT 58.634 43.478 13.44 0.00 0.00 2.57
570 571 4.208460 CCACGCGTAGGTTTATAGTTCATG 59.792 45.833 13.44 0.00 0.00 3.07
571 572 5.038683 CACGCGTAGGTTTATAGTTCATGA 58.961 41.667 13.44 0.00 0.00 3.07
572 573 5.517411 CACGCGTAGGTTTATAGTTCATGAA 59.483 40.000 13.44 3.38 0.00 2.57
573 574 6.035220 CACGCGTAGGTTTATAGTTCATGAAA 59.965 38.462 13.44 0.00 0.00 2.69
574 575 6.255020 ACGCGTAGGTTTATAGTTCATGAAAG 59.745 38.462 11.67 0.00 0.00 2.62
576 577 7.201496 CGCGTAGGTTTATAGTTCATGAAAGTT 60.201 37.037 10.35 1.72 0.00 2.66
577 578 7.903431 GCGTAGGTTTATAGTTCATGAAAGTTG 59.097 37.037 10.35 0.00 0.00 3.16
578 579 7.903431 CGTAGGTTTATAGTTCATGAAAGTTGC 59.097 37.037 10.35 0.00 0.00 4.17
579 580 7.158099 AGGTTTATAGTTCATGAAAGTTGCC 57.842 36.000 10.35 7.10 0.00 4.52
580 581 6.719370 AGGTTTATAGTTCATGAAAGTTGCCA 59.281 34.615 10.35 0.00 0.00 4.92
581 582 7.029563 GGTTTATAGTTCATGAAAGTTGCCAG 58.970 38.462 10.35 0.00 0.00 4.85
583 584 1.267806 AGTTCATGAAAGTTGCCAGCG 59.732 47.619 10.35 0.00 0.00 5.18
584 585 1.001378 GTTCATGAAAGTTGCCAGCGT 60.001 47.619 10.35 0.00 0.00 5.07
585 586 0.874390 TCATGAAAGTTGCCAGCGTC 59.126 50.000 0.00 0.00 0.00 5.19
586 587 0.877071 CATGAAAGTTGCCAGCGTCT 59.123 50.000 0.00 0.00 0.00 4.18
587 588 0.877071 ATGAAAGTTGCCAGCGTCTG 59.123 50.000 0.52 0.52 0.00 3.51
588 589 0.463654 TGAAAGTTGCCAGCGTCTGT 60.464 50.000 6.19 0.00 0.00 3.41
589 590 0.235926 GAAAGTTGCCAGCGTCTGTC 59.764 55.000 6.19 0.00 0.00 3.51
590 591 0.179045 AAAGTTGCCAGCGTCTGTCT 60.179 50.000 6.19 0.00 0.00 3.41
591 592 0.179045 AAGTTGCCAGCGTCTGTCTT 60.179 50.000 6.19 3.49 0.00 3.01
592 593 0.882042 AGTTGCCAGCGTCTGTCTTG 60.882 55.000 6.19 0.00 0.00 3.02
593 594 2.253758 TTGCCAGCGTCTGTCTTGC 61.254 57.895 6.19 3.48 0.00 4.01
594 595 3.782244 GCCAGCGTCTGTCTTGCG 61.782 66.667 6.19 0.00 0.00 4.85
596 597 3.782244 CAGCGTCTGTCTTGCGGC 61.782 66.667 0.00 0.00 0.00 6.53
599 600 2.259818 CGTCTGTCTTGCGGCTCT 59.740 61.111 0.00 0.00 0.00 4.09
601 602 0.798771 CGTCTGTCTTGCGGCTCTAC 60.799 60.000 0.00 0.00 0.00 2.59
602 603 0.243907 GTCTGTCTTGCGGCTCTACA 59.756 55.000 0.00 1.75 0.00 2.74
604 605 1.343142 TCTGTCTTGCGGCTCTACAAA 59.657 47.619 0.00 0.00 0.00 2.83
607 608 3.932710 CTGTCTTGCGGCTCTACAAAATA 59.067 43.478 0.00 0.00 0.00 1.40
608 609 3.682858 TGTCTTGCGGCTCTACAAAATAC 59.317 43.478 0.00 0.00 0.00 1.89
609 610 3.682858 GTCTTGCGGCTCTACAAAATACA 59.317 43.478 0.00 0.00 0.00 2.29
611 612 4.391830 TCTTGCGGCTCTACAAAATACAAG 59.608 41.667 0.00 0.00 34.69 3.16
612 613 3.006940 TGCGGCTCTACAAAATACAAGG 58.993 45.455 0.00 0.00 0.00 3.61
613 614 2.223272 GCGGCTCTACAAAATACAAGGC 60.223 50.000 0.00 0.00 0.00 4.35
614 615 2.354821 CGGCTCTACAAAATACAAGGCC 59.645 50.000 0.00 0.00 0.00 5.19
615 616 2.354821 GGCTCTACAAAATACAAGGCCG 59.645 50.000 0.00 0.00 0.00 6.13
617 618 3.181510 GCTCTACAAAATACAAGGCCGTG 60.182 47.826 17.83 17.83 0.00 4.94
621 622 1.000827 CAAAATACAAGGCCGTGCACA 60.001 47.619 19.37 4.60 0.00 4.57
623 624 1.241315 AATACAAGGCCGTGCACACC 61.241 55.000 19.37 17.37 0.00 4.16
624 625 2.404566 ATACAAGGCCGTGCACACCA 62.405 55.000 23.75 7.26 0.00 4.17
625 626 2.404566 TACAAGGCCGTGCACACCAT 62.405 55.000 23.75 12.33 0.00 3.55
626 627 2.985282 AAGGCCGTGCACACCATG 60.985 61.111 23.75 5.30 0.00 3.66
627 628 3.790416 AAGGCCGTGCACACCATGT 62.790 57.895 23.75 9.12 0.00 3.21
641 642 6.479095 CACACCATGTGTTTGTTTTTCTTT 57.521 33.333 0.00 0.00 45.08 2.52
642 643 6.305639 CACACCATGTGTTTGTTTTTCTTTG 58.694 36.000 0.00 0.00 45.08 2.77
643 644 5.994668 ACACCATGTGTTTGTTTTTCTTTGT 59.005 32.000 0.00 0.00 45.08 2.83
644 645 6.484977 ACACCATGTGTTTGTTTTTCTTTGTT 59.515 30.769 0.00 0.00 45.08 2.83
647 648 7.390162 ACCATGTGTTTGTTTTTCTTTGTTGAT 59.610 29.630 0.00 0.00 0.00 2.57
648 649 7.693120 CCATGTGTTTGTTTTTCTTTGTTGATG 59.307 33.333 0.00 0.00 0.00 3.07
649 650 7.953158 TGTGTTTGTTTTTCTTTGTTGATGA 57.047 28.000 0.00 0.00 0.00 2.92
650 651 8.016497 TGTGTTTGTTTTTCTTTGTTGATGAG 57.984 30.769 0.00 0.00 0.00 2.90
653 654 8.924691 TGTTTGTTTTTCTTTGTTGATGAGAAG 58.075 29.630 0.00 0.00 31.67 2.85
654 655 9.139174 GTTTGTTTTTCTTTGTTGATGAGAAGA 57.861 29.630 0.00 0.00 31.67 2.87
656 657 9.874205 TTGTTTTTCTTTGTTGATGAGAAGATT 57.126 25.926 0.00 0.00 31.67 2.40
660 661 9.630098 TTTTCTTTGTTGATGAGAAGATTATGC 57.370 29.630 0.00 0.00 31.67 3.14
661 662 7.008440 TCTTTGTTGATGAGAAGATTATGCG 57.992 36.000 0.00 0.00 0.00 4.73
699 3874 0.725117 CGACGGAGCCCAAACAATAC 59.275 55.000 0.00 0.00 0.00 1.89
703 3879 0.817654 GGAGCCCAAACAATACTGCC 59.182 55.000 0.00 0.00 0.00 4.85
710 3886 1.199097 CAAACAATACTGCCCGTGTCC 59.801 52.381 0.00 0.00 0.00 4.02
724 3900 1.132453 CGTGTCCGCAGTCTGATCTTA 59.868 52.381 3.32 0.00 0.00 2.10
726 3902 2.164624 GTGTCCGCAGTCTGATCTTACT 59.835 50.000 3.32 0.00 0.00 2.24
729 3905 4.461431 TGTCCGCAGTCTGATCTTACTAAA 59.539 41.667 3.32 0.00 0.00 1.85
788 3964 2.544267 GACGTGTTAGCAGCCATATTCC 59.456 50.000 0.00 0.00 0.00 3.01
810 3986 3.241059 CGACGCTGCGAGCACTAC 61.241 66.667 30.47 9.16 42.58 2.73
832 4008 2.629639 AATCGCCTTTGCTTTAACGG 57.370 45.000 0.00 0.00 34.43 4.44
836 4012 1.443702 CCTTTGCTTTAACGGCGCC 60.444 57.895 19.07 19.07 0.00 6.53
942 4118 2.125350 CTCAAGCGACTCCCCAGC 60.125 66.667 0.00 0.00 0.00 4.85
949 4125 2.665603 GACTCCCCAGCCAGTGAC 59.334 66.667 0.00 0.00 0.00 3.67
1190 4378 0.041982 GAGGAGGAGGAGAAGGTGGT 59.958 60.000 0.00 0.00 0.00 4.16
1192 4380 0.545548 GGAGGAGGAGAAGGTGGTGT 60.546 60.000 0.00 0.00 0.00 4.16
1357 4545 1.305633 AGCAGAGCAGAGCACCCTA 60.306 57.895 0.00 0.00 0.00 3.53
1377 4565 2.647846 ATTTTTGGGCCCTTCCTCAT 57.352 45.000 25.70 4.57 34.39 2.90
1378 4566 1.937191 TTTTTGGGCCCTTCCTCATC 58.063 50.000 25.70 0.00 34.39 2.92
1379 4567 0.041090 TTTTGGGCCCTTCCTCATCC 59.959 55.000 25.70 0.00 34.39 3.51
1462 4661 4.519350 GGGGTCGGATGAATTTAGGATTTC 59.481 45.833 0.00 0.00 0.00 2.17
1484 4683 2.866156 AGATGGTCGCGTGTGATTATTG 59.134 45.455 5.77 0.00 0.00 1.90
1490 4689 1.327460 CGCGTGTGATTATTGTGAGGG 59.673 52.381 0.00 0.00 0.00 4.30
1495 4694 5.768317 CGTGTGATTATTGTGAGGGTTTTT 58.232 37.500 0.00 0.00 0.00 1.94
1568 4767 2.408050 GGATTCATCCTCCGTTCATCG 58.592 52.381 0.00 0.00 43.73 3.84
1752 4953 4.141937 GGTGATAGACCTTATGAGTGTGCA 60.142 45.833 0.00 0.00 42.25 4.57
1753 4954 5.453903 GGTGATAGACCTTATGAGTGTGCAT 60.454 44.000 0.00 0.00 42.25 3.96
1756 4957 7.543868 GTGATAGACCTTATGAGTGTGCATATC 59.456 40.741 0.00 0.00 31.34 1.63
1757 4958 5.876651 AGACCTTATGAGTGTGCATATCA 57.123 39.130 0.00 0.00 31.34 2.15
1758 4959 6.430962 AGACCTTATGAGTGTGCATATCAT 57.569 37.500 13.59 13.59 37.44 2.45
1759 4960 7.544804 AGACCTTATGAGTGTGCATATCATA 57.455 36.000 12.03 12.03 35.39 2.15
1760 4961 7.382110 AGACCTTATGAGTGTGCATATCATAC 58.618 38.462 14.46 6.86 36.05 2.39
1762 4963 7.739825 ACCTTATGAGTGTGCATATCATACTT 58.260 34.615 14.46 3.93 45.49 2.24
1763 4964 8.213679 ACCTTATGAGTGTGCATATCATACTTT 58.786 33.333 14.46 3.68 45.49 2.66
1764 4965 8.501580 CCTTATGAGTGTGCATATCATACTTTG 58.498 37.037 14.46 8.12 45.49 2.77
1765 4966 6.872628 ATGAGTGTGCATATCATACTTTGG 57.127 37.500 8.89 0.00 45.49 3.28
1766 4967 5.125356 TGAGTGTGCATATCATACTTTGGG 58.875 41.667 0.00 0.00 45.49 4.12
1767 4968 4.464008 AGTGTGCATATCATACTTTGGGG 58.536 43.478 0.00 0.00 43.43 4.96
1768 4969 4.165950 AGTGTGCATATCATACTTTGGGGA 59.834 41.667 0.00 0.00 43.43 4.81
1769 4970 5.072741 GTGTGCATATCATACTTTGGGGAT 58.927 41.667 0.00 0.00 34.42 3.85
1770 4971 6.044287 AGTGTGCATATCATACTTTGGGGATA 59.956 38.462 0.00 0.00 43.43 2.59
1771 4972 6.372659 GTGTGCATATCATACTTTGGGGATAG 59.627 42.308 0.00 0.00 34.42 2.08
1772 4973 6.272090 TGTGCATATCATACTTTGGGGATAGA 59.728 38.462 0.00 0.00 0.00 1.98
1773 4974 7.037370 TGTGCATATCATACTTTGGGGATAGAT 60.037 37.037 0.00 0.00 0.00 1.98
1774 4975 7.831193 GTGCATATCATACTTTGGGGATAGATT 59.169 37.037 0.00 0.00 0.00 2.40
1775 4976 9.056799 TGCATATCATACTTTGGGGATAGATTA 57.943 33.333 0.00 0.00 0.00 1.75
1796 4997 9.171877 AGATTATAGCTTTATAGAGGCAAATGC 57.828 33.333 0.00 0.00 41.14 3.56
1817 5018 2.135933 GTCGCTCTGTGCAACTACTTT 58.864 47.619 2.42 0.00 43.06 2.66
1818 5019 2.096713 GTCGCTCTGTGCAACTACTTTG 60.097 50.000 2.42 0.00 43.06 2.77
1822 5023 1.771854 TCTGTGCAACTACTTTGGGGA 59.228 47.619 0.00 0.00 38.04 4.81
1886 5156 6.417930 GCTAAACAAAAACTCCTGCTAAACAG 59.582 38.462 0.00 0.00 46.77 3.16
1926 5196 4.101585 TGGTTAATAGCATCACTCCAGGAG 59.898 45.833 15.72 15.72 35.52 3.69
2038 5308 1.270839 TGTGGTTCAGAAGGCTACAGC 60.271 52.381 0.00 0.00 41.14 4.40
2042 5312 2.761208 GGTTCAGAAGGCTACAGCTAGA 59.239 50.000 0.54 0.00 41.70 2.43
2224 5494 8.789762 ACGCTTCCTACTTATTGTTTATGTTTT 58.210 29.630 0.00 0.00 0.00 2.43
2225 5495 9.620660 CGCTTCCTACTTATTGTTTATGTTTTT 57.379 29.630 0.00 0.00 0.00 1.94
2297 5577 7.807907 AGGCATACAGAATTTCAAAGTTTAACG 59.192 33.333 0.00 0.00 0.00 3.18
2418 5698 4.021981 GCCTTTGCTGAAGTAATGGAACTT 60.022 41.667 14.57 0.00 37.20 2.66
2435 5715 4.439968 GAACTTGGCTACCTATGTACACC 58.560 47.826 0.00 0.00 0.00 4.16
2439 5719 1.753073 GGCTACCTATGTACACCGTGT 59.247 52.381 9.58 9.58 0.00 4.49
2479 5761 1.301677 CTCTTCCAGCGACCCTTTGC 61.302 60.000 0.00 0.00 0.00 3.68
3145 6429 2.031944 GTGAAAAGTCGAAAGTGAGCCC 60.032 50.000 0.00 0.00 0.00 5.19
3147 6431 0.391597 AAAGTCGAAAGTGAGCCCGA 59.608 50.000 0.00 0.00 0.00 5.14
3202 6486 6.664428 AACACAGTATTTGGCAACCTAAAT 57.336 33.333 0.00 0.00 0.00 1.40
3218 6502 9.435688 GCAACCTAAATAAATTCTGGAAACAAT 57.564 29.630 0.00 0.00 42.06 2.71
3329 6613 4.660168 AGATTGAAGTTCATGTCTGCCTT 58.340 39.130 16.31 0.00 0.00 4.35
3333 6617 5.186996 TGAAGTTCATGTCTGCCTTTTTC 57.813 39.130 0.08 0.00 0.00 2.29
3527 6811 0.610174 TCAGAGAGCTTCCGTTGCAT 59.390 50.000 0.00 0.00 0.00 3.96
3904 7188 3.080319 GCAGCATAGAAATGGGGAGATC 58.920 50.000 0.00 0.00 33.38 2.75
4066 7350 1.686355 TGCGGTGGATTTTGTCAACT 58.314 45.000 0.00 0.00 30.95 3.16
4106 7390 2.547007 GGCCGCAAATTTTACACTGGTT 60.547 45.455 0.00 0.00 0.00 3.67
4480 7764 2.159382 GGAAAAGTTGCTTCCGATGGA 58.841 47.619 0.00 0.00 33.40 3.41
4612 7896 1.538629 TGTCCTCCATGTCAGGGCA 60.539 57.895 10.51 10.51 43.67 5.36
4690 7974 2.562298 CCAAATGGCAAAAGCTCCTGTA 59.438 45.455 0.00 0.00 0.00 2.74
4708 7992 4.756642 CCTGTACAGAAGTTTGCTGATCAA 59.243 41.667 24.68 0.00 36.86 2.57
4711 7995 6.902341 TGTACAGAAGTTTGCTGATCAAATC 58.098 36.000 0.00 0.00 45.43 2.17
4775 8059 7.329962 TGTGTTAATCCAGTAACATTGTACTCG 59.670 37.037 3.16 0.00 43.82 4.18
4926 8210 3.750652 GCTTTCAGCTAGCTCTTCAGTTT 59.249 43.478 16.15 0.00 38.45 2.66
4959 8243 2.045926 GTGATCGCCTGCCCTTGT 60.046 61.111 0.00 0.00 0.00 3.16
4998 8282 0.669619 CAACTGCTGTGATGGTTGCA 59.330 50.000 0.00 0.00 33.86 4.08
5069 8353 1.134670 GGAGAGTGCGCAGAAGGTATT 60.135 52.381 12.22 0.00 0.00 1.89
5074 8358 4.572389 AGAGTGCGCAGAAGGTATTTAATG 59.428 41.667 12.22 0.00 0.00 1.90
5111 8395 6.936900 AGTGAAAACATGTTAGCAGATAGTGT 59.063 34.615 12.39 0.00 0.00 3.55
5188 8472 4.659111 TTTCGACAAGACAGGAACACTA 57.341 40.909 0.00 0.00 0.00 2.74
5197 8481 3.650942 AGACAGGAACACTAACCATTGGA 59.349 43.478 10.37 0.00 0.00 3.53
5296 8580 9.575783 GCAGAGGTATGCTTTCTAACTATATAC 57.424 37.037 0.00 0.00 43.07 1.47
5408 8693 1.064783 GCATCCGCTAGCAAAAGCC 59.935 57.895 16.45 0.00 39.43 4.35
5409 8694 1.353103 CATCCGCTAGCAAAAGCCG 59.647 57.895 16.45 0.00 39.43 5.52
5518 8803 1.129998 CAAGGCAAAGATCAGCGACAG 59.870 52.381 0.00 0.00 0.00 3.51
5519 8804 1.023513 AGGCAAAGATCAGCGACAGC 61.024 55.000 0.00 0.00 45.58 4.40
5588 8873 1.078848 CCCCGTGGAAGCTTCAGAG 60.079 63.158 27.02 16.20 0.00 3.35
5819 9104 2.309528 ACATCATAGCCGAAGCGAAA 57.690 45.000 0.00 0.00 46.67 3.46
5888 9173 7.271511 AGACTAGAAGATATCCTTGCTTTGTG 58.728 38.462 0.00 0.00 34.68 3.33
5913 9200 3.971468 AGGGCCATATCCTTTGCTTTA 57.029 42.857 6.18 0.00 0.00 1.85
5923 9210 9.736023 CCATATCCTTTGCTTTATTACTTTGAC 57.264 33.333 0.00 0.00 0.00 3.18
5941 9228 0.601046 ACTGATGGTGCTGTCACACG 60.601 55.000 4.98 0.00 44.87 4.49
5991 9285 5.949735 TCACCGCCTTTAAATCTTTTGATC 58.050 37.500 0.00 0.00 38.40 2.92
6011 9305 1.367599 GATCACTGCAGCTGTCTGGC 61.368 60.000 15.27 0.00 40.65 4.85
6020 9314 1.166531 AGCTGTCTGGCAAAACCGTC 61.167 55.000 0.00 0.00 43.94 4.79
6050 9344 1.582937 CGACGGGATCAACGACTCG 60.583 63.158 14.79 10.67 34.93 4.18
6221 9515 1.375523 GAACTACGTGTGGGCCCTG 60.376 63.158 25.70 12.81 0.00 4.45
6224 9518 4.642488 TACGTGTGGGCCCTGGGA 62.642 66.667 25.70 0.00 0.00 4.37
6350 9644 2.574399 GTCGTCTGCTGGTCCCTC 59.426 66.667 0.00 0.00 0.00 4.30
6396 9690 3.320879 ATCACACAGGAGCGGCAGG 62.321 63.158 1.45 0.00 0.00 4.85
6410 9704 0.396060 GGCAGGCATAGAGAAGAGGG 59.604 60.000 0.00 0.00 0.00 4.30
6413 9707 1.118356 AGGCATAGAGAAGAGGGCCG 61.118 60.000 0.00 0.00 45.79 6.13
6417 9711 1.067821 CATAGAGAAGAGGGCCGTCAC 59.932 57.143 26.40 18.79 0.00 3.67
6437 9731 8.812329 CCGTCACCGTATAGATAATACTAGTAC 58.188 40.741 4.31 0.00 38.69 2.73
6616 9917 7.712205 TCGCTTTAACAGGTAGGGATAAATTAC 59.288 37.037 0.00 0.00 0.00 1.89
6620 9958 9.816354 TTTAACAGGTAGGGATAAATTACGTAC 57.184 33.333 0.00 0.00 0.00 3.67
6621 9959 6.076981 ACAGGTAGGGATAAATTACGTACG 57.923 41.667 15.01 15.01 0.00 3.67
6622 9960 5.594317 ACAGGTAGGGATAAATTACGTACGT 59.406 40.000 25.98 25.98 0.00 3.57
6623 9961 6.770785 ACAGGTAGGGATAAATTACGTACGTA 59.229 38.462 23.60 23.60 0.00 3.57
6624 9962 7.041098 ACAGGTAGGGATAAATTACGTACGTAG 60.041 40.741 25.56 12.18 31.71 3.51
6626 9964 8.154856 AGGTAGGGATAAATTACGTACGTAGTA 58.845 37.037 25.56 19.09 45.11 1.82
6689 10031 1.067846 GGGAATTGAACGACTTTGGGC 60.068 52.381 0.00 0.00 0.00 5.36
6690 10032 1.401018 GGAATTGAACGACTTTGGGCG 60.401 52.381 0.00 0.00 0.00 6.13
6708 10050 2.926242 GGGGTCAGGGGTCGTCAA 60.926 66.667 0.00 0.00 0.00 3.18
6709 10051 2.663196 GGGTCAGGGGTCGTCAAG 59.337 66.667 0.00 0.00 0.00 3.02
6710 10052 1.911766 GGGTCAGGGGTCGTCAAGA 60.912 63.158 0.00 0.00 0.00 3.02
6754 10096 8.280497 GTCAAGTTCGAAAGCAATAAGTAAAGA 58.720 33.333 0.00 0.00 0.00 2.52
6755 10097 8.999431 TCAAGTTCGAAAGCAATAAGTAAAGAT 58.001 29.630 0.00 0.00 0.00 2.40
6756 10098 9.055248 CAAGTTCGAAAGCAATAAGTAAAGATG 57.945 33.333 0.00 0.00 0.00 2.90
6757 10099 7.244192 AGTTCGAAAGCAATAAGTAAAGATGC 58.756 34.615 0.00 0.00 37.28 3.91
6766 10108 6.238731 GCAATAAGTAAAGATGCATGGTGCTA 60.239 38.462 2.46 0.00 45.31 3.49
6836 10181 0.321996 GTCCACTTGTCCTCCCTGTC 59.678 60.000 0.00 0.00 0.00 3.51
6863 10208 0.108138 GCGATGCCAGTCACCTAACT 60.108 55.000 0.00 0.00 0.00 2.24
6864 10209 1.645034 CGATGCCAGTCACCTAACTG 58.355 55.000 0.00 0.00 45.10 3.16
6875 10220 2.232941 TCACCTAACTGAGCCGGTTAAG 59.767 50.000 1.90 0.90 35.20 1.85
6877 10222 2.901839 ACCTAACTGAGCCGGTTAAGAA 59.098 45.455 10.13 0.00 35.20 2.52
6878 10223 3.259902 CCTAACTGAGCCGGTTAAGAAC 58.740 50.000 10.13 0.00 35.20 3.01
6879 10224 1.792006 AACTGAGCCGGTTAAGAACG 58.208 50.000 10.13 0.00 30.44 3.95
6881 10226 0.669318 CTGAGCCGGTTAAGAACGCA 60.669 55.000 1.90 0.00 0.00 5.24
6882 10227 0.249953 TGAGCCGGTTAAGAACGCAA 60.250 50.000 1.90 0.00 0.00 4.85
6883 10228 1.084289 GAGCCGGTTAAGAACGCAAT 58.916 50.000 1.90 0.00 0.00 3.56
6884 10229 0.802494 AGCCGGTTAAGAACGCAATG 59.198 50.000 1.90 0.00 0.00 2.82
6885 10230 0.796870 GCCGGTTAAGAACGCAATGC 60.797 55.000 1.90 0.00 0.00 3.56
6886 10231 0.802494 CCGGTTAAGAACGCAATGCT 59.198 50.000 2.94 0.00 0.00 3.79
6887 10232 1.465689 CCGGTTAAGAACGCAATGCTG 60.466 52.381 2.94 0.00 0.00 4.41
6888 10233 1.617740 GGTTAAGAACGCAATGCTGC 58.382 50.000 2.94 0.00 45.75 5.25
6898 10246 1.410737 GCAATGCTGCGCAACTGATG 61.411 55.000 13.05 8.97 43.62 3.07
6936 10284 8.408601 CCAAAAGGAACCTGATATAAAGTGATG 58.591 37.037 0.00 0.00 0.00 3.07
6953 10301 7.647907 AAGTGATGCAGCTTTAATTTCTTTG 57.352 32.000 2.53 0.00 0.00 2.77
6969 10317 6.575162 TTTCTTTGGAGAGGATTGTAAAGC 57.425 37.500 0.00 0.00 32.44 3.51
6979 10327 1.924524 GATTGTAAAGCGAGCGCAGTA 59.075 47.619 17.68 5.60 44.88 2.74
6980 10328 1.785768 TTGTAAAGCGAGCGCAGTAA 58.214 45.000 17.68 2.31 44.88 2.24
6981 10329 2.004583 TGTAAAGCGAGCGCAGTAAT 57.995 45.000 17.68 0.00 44.88 1.89
6982 10330 3.153676 TGTAAAGCGAGCGCAGTAATA 57.846 42.857 17.68 0.01 44.88 0.98
6996 10344 4.552355 GCAGTAATAAAGCCGGTGTTTTT 58.448 39.130 1.90 1.88 0.00 1.94
7000 10348 3.934457 ATAAAGCCGGTGTTTTTCCTG 57.066 42.857 1.90 0.00 0.00 3.86
7007 10355 2.223923 CCGGTGTTTTTCCTGCAATGAA 60.224 45.455 0.00 0.00 0.00 2.57
7008 10356 3.554752 CCGGTGTTTTTCCTGCAATGAAT 60.555 43.478 0.00 0.00 0.00 2.57
7009 10357 3.674753 CGGTGTTTTTCCTGCAATGAATC 59.325 43.478 0.00 0.00 0.00 2.52
7011 10359 5.055812 GGTGTTTTTCCTGCAATGAATCAA 58.944 37.500 0.00 0.00 0.00 2.57
7013 10361 6.347888 GGTGTTTTTCCTGCAATGAATCAATG 60.348 38.462 0.00 0.00 0.00 2.82
7014 10362 6.424509 GTGTTTTTCCTGCAATGAATCAATGA 59.575 34.615 1.95 0.00 0.00 2.57
7023 10371 5.752955 TGCAATGAATCAATGATGATGCTTG 59.247 36.000 17.38 10.12 45.60 4.01
7055 10403 2.247790 GACAGTGGTCGCAGCAAAT 58.752 52.632 0.00 0.00 33.68 2.32
7101 10449 2.223112 CGGATCCATCAAACAAAGCTCG 60.223 50.000 13.41 0.00 0.00 5.03
7102 10450 2.478539 GGATCCATCAAACAAAGCTCGC 60.479 50.000 6.95 0.00 0.00 5.03
7103 10451 1.896220 TCCATCAAACAAAGCTCGCT 58.104 45.000 0.00 0.00 0.00 4.93
7104 10452 1.806542 TCCATCAAACAAAGCTCGCTC 59.193 47.619 0.00 0.00 0.00 5.03
7117 10465 1.344942 CTCGCTCAACCGGTTCTTCG 61.345 60.000 19.24 19.47 0.00 3.79
7125 10473 0.540365 ACCGGTTCTTCGTCAGGGTA 60.540 55.000 0.00 0.00 0.00 3.69
7126 10474 0.604578 CCGGTTCTTCGTCAGGGTAA 59.395 55.000 0.00 0.00 0.00 2.85
7157 10511 2.742372 CCTTCTTGTGGCCCGTCG 60.742 66.667 0.00 0.00 0.00 5.12
7220 10574 4.833811 CGAGGCATCGTCCATTCA 57.166 55.556 13.51 0.00 44.09 2.57
7222 10576 1.586422 CGAGGCATCGTCCATTCATT 58.414 50.000 13.51 0.00 44.09 2.57
7223 10577 1.528586 CGAGGCATCGTCCATTCATTC 59.471 52.381 13.51 0.00 44.09 2.67
7225 10579 2.945008 GAGGCATCGTCCATTCATTCAA 59.055 45.455 0.00 0.00 0.00 2.69
7226 10580 2.684881 AGGCATCGTCCATTCATTCAAC 59.315 45.455 0.00 0.00 0.00 3.18
7263 10617 7.165485 TCACCACTTGCTTGTGTTATATACTT 58.835 34.615 8.40 0.00 36.30 2.24
7264 10618 8.315482 TCACCACTTGCTTGTGTTATATACTTA 58.685 33.333 8.40 0.00 36.30 2.24
7265 10619 9.109393 CACCACTTGCTTGTGTTATATACTTAT 57.891 33.333 8.40 0.00 36.30 1.73
7298 10652 3.088532 GCACCATAAACCAACCTGATCA 58.911 45.455 0.00 0.00 0.00 2.92
7301 10655 4.339247 CACCATAAACCAACCTGATCATCC 59.661 45.833 0.00 0.00 0.00 3.51
7311 10665 0.249073 CTGATCATCCACGTCCGTCC 60.249 60.000 0.00 0.00 0.00 4.79
7312 10666 0.968393 TGATCATCCACGTCCGTCCA 60.968 55.000 0.00 0.00 0.00 4.02
7317 10671 1.725557 ATCCACGTCCGTCCATCTCG 61.726 60.000 0.00 0.00 0.00 4.04
7318 10672 2.404186 CCACGTCCGTCCATCTCGA 61.404 63.158 0.00 0.00 0.00 4.04
7319 10673 1.504900 CACGTCCGTCCATCTCGAA 59.495 57.895 0.00 0.00 0.00 3.71
7320 10674 0.523546 CACGTCCGTCCATCTCGAAG 60.524 60.000 0.00 0.00 0.00 3.79
7321 10675 0.675837 ACGTCCGTCCATCTCGAAGA 60.676 55.000 0.00 0.00 0.00 2.87
7322 10676 0.248134 CGTCCGTCCATCTCGAAGAC 60.248 60.000 0.00 0.00 0.00 3.01
7323 10677 0.809385 GTCCGTCCATCTCGAAGACA 59.191 55.000 0.00 0.00 0.00 3.41
7324 10678 0.809385 TCCGTCCATCTCGAAGACAC 59.191 55.000 0.00 0.00 0.00 3.67
7325 10679 0.179134 CCGTCCATCTCGAAGACACC 60.179 60.000 0.00 0.00 0.00 4.16
7326 10680 0.523546 CGTCCATCTCGAAGACACCG 60.524 60.000 0.00 0.00 0.00 4.94
7327 10681 0.526662 GTCCATCTCGAAGACACCGT 59.473 55.000 0.00 0.00 0.00 4.83
7328 10682 1.067776 GTCCATCTCGAAGACACCGTT 60.068 52.381 0.00 0.00 0.00 4.44
7329 10683 1.067846 TCCATCTCGAAGACACCGTTG 60.068 52.381 0.00 0.00 0.00 4.10
7330 10684 1.067846 CCATCTCGAAGACACCGTTGA 60.068 52.381 0.00 0.00 0.00 3.18
7331 10685 2.417379 CCATCTCGAAGACACCGTTGAT 60.417 50.000 0.00 0.00 0.00 2.57
7332 10686 3.254060 CATCTCGAAGACACCGTTGATT 58.746 45.455 0.00 0.00 0.00 2.57
7333 10687 4.421058 CATCTCGAAGACACCGTTGATTA 58.579 43.478 0.00 0.00 0.00 1.75
7334 10688 4.713824 TCTCGAAGACACCGTTGATTAT 57.286 40.909 0.00 0.00 0.00 1.28
7335 10689 4.421058 TCTCGAAGACACCGTTGATTATG 58.579 43.478 0.00 0.00 0.00 1.90
7336 10690 2.927477 TCGAAGACACCGTTGATTATGC 59.073 45.455 0.00 0.00 0.00 3.14
7337 10691 2.930040 CGAAGACACCGTTGATTATGCT 59.070 45.455 0.00 0.00 0.00 3.79
7338 10692 3.242091 CGAAGACACCGTTGATTATGCTG 60.242 47.826 0.00 0.00 0.00 4.41
7339 10693 3.334583 AGACACCGTTGATTATGCTGT 57.665 42.857 0.00 0.00 0.00 4.40
7340 10694 3.674997 AGACACCGTTGATTATGCTGTT 58.325 40.909 0.00 0.00 0.00 3.16
7341 10695 4.072131 AGACACCGTTGATTATGCTGTTT 58.928 39.130 0.00 0.00 0.00 2.83
7342 10696 4.518970 AGACACCGTTGATTATGCTGTTTT 59.481 37.500 0.00 0.00 0.00 2.43
7343 10697 4.545610 ACACCGTTGATTATGCTGTTTTG 58.454 39.130 0.00 0.00 0.00 2.44
7344 10698 3.364621 CACCGTTGATTATGCTGTTTTGC 59.635 43.478 0.00 0.00 0.00 3.68
7345 10699 3.255642 ACCGTTGATTATGCTGTTTTGCT 59.744 39.130 0.00 0.00 0.00 3.91
7346 10700 3.609373 CCGTTGATTATGCTGTTTTGCTG 59.391 43.478 0.00 0.00 0.00 4.41
7347 10701 3.059834 CGTTGATTATGCTGTTTTGCTGC 59.940 43.478 0.00 0.00 41.65 5.25
7348 10702 4.240096 GTTGATTATGCTGTTTTGCTGCT 58.760 39.130 0.00 0.00 41.79 4.24
7349 10703 4.100707 TGATTATGCTGTTTTGCTGCTC 57.899 40.909 0.00 0.00 41.79 4.26
7350 10704 2.617250 TTATGCTGTTTTGCTGCTCG 57.383 45.000 0.00 0.00 41.79 5.03
7351 10705 0.168788 TATGCTGTTTTGCTGCTCGC 59.831 50.000 0.00 0.00 41.79 5.03
7352 10706 1.521450 ATGCTGTTTTGCTGCTCGCT 61.521 50.000 0.00 0.00 41.79 4.93
7353 10707 0.884259 TGCTGTTTTGCTGCTCGCTA 60.884 50.000 0.00 0.00 41.79 4.26
7354 10708 0.179205 GCTGTTTTGCTGCTCGCTAG 60.179 55.000 0.00 0.00 40.11 3.42
7363 10717 4.758692 GCTCGCTAGCTTATGCCA 57.241 55.556 13.93 0.00 45.85 4.92
7364 10718 2.229965 GCTCGCTAGCTTATGCCAC 58.770 57.895 13.93 0.00 45.85 5.01
7365 10719 1.552348 GCTCGCTAGCTTATGCCACG 61.552 60.000 13.93 0.00 45.85 4.94
7366 10720 0.249073 CTCGCTAGCTTATGCCACGT 60.249 55.000 13.93 0.00 40.80 4.49
7367 10721 1.001706 CTCGCTAGCTTATGCCACGTA 60.002 52.381 13.93 0.00 40.80 3.57
7368 10722 1.406180 TCGCTAGCTTATGCCACGTAA 59.594 47.619 13.93 0.00 40.80 3.18
7369 10723 1.787155 CGCTAGCTTATGCCACGTAAG 59.213 52.381 13.93 2.80 40.80 2.34
7376 10730 4.678509 CTTATGCCACGTAAGCAGAAAA 57.321 40.909 17.25 10.96 44.90 2.29
7377 10731 2.989422 ATGCCACGTAAGCAGAAAAC 57.011 45.000 16.43 0.00 44.90 2.43
7378 10732 0.584396 TGCCACGTAAGCAGAAAACG 59.416 50.000 8.27 0.00 45.62 3.60
7379 10733 0.110373 GCCACGTAAGCAGAAAACGG 60.110 55.000 4.95 0.00 40.81 4.44
7380 10734 0.515564 CCACGTAAGCAGAAAACGGG 59.484 55.000 0.00 0.00 40.81 5.28
7381 10735 1.504359 CACGTAAGCAGAAAACGGGA 58.496 50.000 0.00 0.00 42.51 5.14
7382 10736 1.193874 CACGTAAGCAGAAAACGGGAC 59.806 52.381 0.00 0.00 42.51 4.46
7383 10737 0.794473 CGTAAGCAGAAAACGGGACC 59.206 55.000 0.00 0.00 33.13 4.46
7384 10738 1.162698 GTAAGCAGAAAACGGGACCC 58.837 55.000 0.00 0.00 0.00 4.46
7385 10739 0.766131 TAAGCAGAAAACGGGACCCA 59.234 50.000 12.15 0.00 0.00 4.51
7386 10740 0.112412 AAGCAGAAAACGGGACCCAT 59.888 50.000 12.15 0.00 0.00 4.00
7387 10741 0.322546 AGCAGAAAACGGGACCCATC 60.323 55.000 12.15 2.92 0.00 3.51
7388 10742 0.322546 GCAGAAAACGGGACCCATCT 60.323 55.000 12.15 5.34 0.00 2.90
7389 10743 1.453155 CAGAAAACGGGACCCATCTG 58.547 55.000 12.15 13.73 0.00 2.90
7390 10744 1.064825 AGAAAACGGGACCCATCTGT 58.935 50.000 12.15 0.00 0.00 3.41
7391 10745 1.003233 AGAAAACGGGACCCATCTGTC 59.997 52.381 12.15 0.65 34.42 3.51
7392 10746 0.321298 AAAACGGGACCCATCTGTCG 60.321 55.000 12.15 0.00 36.07 4.35
7393 10747 1.477685 AAACGGGACCCATCTGTCGT 61.478 55.000 12.15 0.00 36.07 4.34
7394 10748 0.612732 AACGGGACCCATCTGTCGTA 60.613 55.000 12.15 0.00 36.07 3.43
7395 10749 0.612732 ACGGGACCCATCTGTCGTAA 60.613 55.000 12.15 0.00 36.07 3.18
7396 10750 0.533491 CGGGACCCATCTGTCGTAAA 59.467 55.000 12.15 0.00 36.07 2.01
7397 10751 1.738030 CGGGACCCATCTGTCGTAAAC 60.738 57.143 12.15 0.00 36.07 2.01
7398 10752 1.276989 GGGACCCATCTGTCGTAAACA 59.723 52.381 5.33 0.00 36.07 2.83
7399 10753 2.344025 GGACCCATCTGTCGTAAACAC 58.656 52.381 0.00 0.00 36.07 3.32
7400 10754 1.990563 GACCCATCTGTCGTAAACACG 59.009 52.381 0.00 0.00 33.24 4.49
7401 10755 0.719465 CCCATCTGTCGTAAACACGC 59.281 55.000 0.00 0.00 33.24 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.302033 AGACGGCTCTTTGGTGCAG 60.302 57.895 0.00 0.00 34.07 4.41
1 2 1.597854 CAGACGGCTCTTTGGTGCA 60.598 57.895 0.00 0.00 34.07 4.57
3 4 1.672356 CCCAGACGGCTCTTTGGTG 60.672 63.158 0.00 0.00 0.00 4.17
16 17 3.319198 GAAGGTGGTCGGCCCAGA 61.319 66.667 2.12 0.00 46.45 3.86
17 18 4.760047 CGAAGGTGGTCGGCCCAG 62.760 72.222 2.12 0.00 46.45 4.45
69 70 3.993376 TACGCCCATTCCGTCGTGC 62.993 63.158 0.00 0.00 39.88 5.34
71 72 2.493030 CTACGCCCATTCCGTCGT 59.507 61.111 0.00 0.00 39.88 4.34
72 73 2.960129 GCTACGCCCATTCCGTCG 60.960 66.667 0.00 0.00 39.88 5.12
73 74 2.588034 GGCTACGCCCATTCCGTC 60.588 66.667 0.00 0.00 44.06 4.79
97 98 2.409870 CCATTCCTCCTGCGGCAAC 61.410 63.158 3.44 0.00 0.00 4.17
98 99 1.925285 ATCCATTCCTCCTGCGGCAA 61.925 55.000 3.44 0.00 0.00 4.52
99 100 1.053835 TATCCATTCCTCCTGCGGCA 61.054 55.000 1.29 1.29 0.00 5.69
102 103 3.007290 TCATCTTATCCATTCCTCCTGCG 59.993 47.826 0.00 0.00 0.00 5.18
103 104 4.322567 GTCATCTTATCCATTCCTCCTGC 58.677 47.826 0.00 0.00 0.00 4.85
105 106 3.580458 CCGTCATCTTATCCATTCCTCCT 59.420 47.826 0.00 0.00 0.00 3.69
106 107 3.307059 CCCGTCATCTTATCCATTCCTCC 60.307 52.174 0.00 0.00 0.00 4.30
107 108 3.578716 TCCCGTCATCTTATCCATTCCTC 59.421 47.826 0.00 0.00 0.00 3.71
108 109 3.580458 CTCCCGTCATCTTATCCATTCCT 59.420 47.826 0.00 0.00 0.00 3.36
109 110 3.307059 CCTCCCGTCATCTTATCCATTCC 60.307 52.174 0.00 0.00 0.00 3.01
111 112 3.325135 GTCCTCCCGTCATCTTATCCATT 59.675 47.826 0.00 0.00 0.00 3.16
112 113 2.900546 GTCCTCCCGTCATCTTATCCAT 59.099 50.000 0.00 0.00 0.00 3.41
113 114 2.317040 GTCCTCCCGTCATCTTATCCA 58.683 52.381 0.00 0.00 0.00 3.41
115 116 2.288518 GCTGTCCTCCCGTCATCTTATC 60.289 54.545 0.00 0.00 0.00 1.75
116 117 1.689273 GCTGTCCTCCCGTCATCTTAT 59.311 52.381 0.00 0.00 0.00 1.73
117 118 1.112113 GCTGTCCTCCCGTCATCTTA 58.888 55.000 0.00 0.00 0.00 2.10
118 119 1.901085 GCTGTCCTCCCGTCATCTT 59.099 57.895 0.00 0.00 0.00 2.40
119 120 2.418910 CGCTGTCCTCCCGTCATCT 61.419 63.158 0.00 0.00 0.00 2.90
122 123 3.062466 CTCGCTGTCCTCCCGTCA 61.062 66.667 0.00 0.00 0.00 4.35
124 125 3.374402 CACTCGCTGTCCTCCCGT 61.374 66.667 0.00 0.00 0.00 5.28
126 127 0.250513 ATTTCACTCGCTGTCCTCCC 59.749 55.000 0.00 0.00 0.00 4.30
127 128 2.003301 GAATTTCACTCGCTGTCCTCC 58.997 52.381 0.00 0.00 0.00 4.30
128 129 2.688507 TGAATTTCACTCGCTGTCCTC 58.311 47.619 0.00 0.00 0.00 3.71
129 130 2.839486 TGAATTTCACTCGCTGTCCT 57.161 45.000 0.00 0.00 0.00 3.85
131 132 5.034554 TCATTTGAATTTCACTCGCTGTC 57.965 39.130 0.00 0.00 0.00 3.51
132 133 4.516698 ACTCATTTGAATTTCACTCGCTGT 59.483 37.500 0.00 0.00 0.00 4.40
133 134 5.039480 ACTCATTTGAATTTCACTCGCTG 57.961 39.130 0.00 0.00 0.00 5.18
134 135 5.700832 TGTACTCATTTGAATTTCACTCGCT 59.299 36.000 0.00 0.00 0.00 4.93
135 136 5.927030 TGTACTCATTTGAATTTCACTCGC 58.073 37.500 0.00 0.00 0.00 5.03
136 137 6.402550 CCCTGTACTCATTTGAATTTCACTCG 60.403 42.308 0.00 0.00 0.00 4.18
137 138 6.127897 CCCCTGTACTCATTTGAATTTCACTC 60.128 42.308 0.00 0.00 0.00 3.51
138 139 5.711976 CCCCTGTACTCATTTGAATTTCACT 59.288 40.000 0.00 0.00 0.00 3.41
139 140 5.476945 ACCCCTGTACTCATTTGAATTTCAC 59.523 40.000 0.00 0.00 0.00 3.18
140 141 5.640147 ACCCCTGTACTCATTTGAATTTCA 58.360 37.500 0.00 0.00 0.00 2.69
141 142 6.590234 AACCCCTGTACTCATTTGAATTTC 57.410 37.500 0.00 0.00 0.00 2.17
143 144 6.994421 AAAACCCCTGTACTCATTTGAATT 57.006 33.333 0.00 0.00 0.00 2.17
144 145 6.994421 AAAAACCCCTGTACTCATTTGAAT 57.006 33.333 0.00 0.00 0.00 2.57
169 170 8.609176 GGTCTCTATATAACGTTTCATTTTGCA 58.391 33.333 5.91 0.00 0.00 4.08
171 172 9.104965 TGGGTCTCTATATAACGTTTCATTTTG 57.895 33.333 5.91 0.00 0.00 2.44
172 173 9.847224 ATGGGTCTCTATATAACGTTTCATTTT 57.153 29.630 5.91 0.00 0.00 1.82
175 176 9.310449 AGTATGGGTCTCTATATAACGTTTCAT 57.690 33.333 5.91 2.65 0.00 2.57
176 177 8.701908 AGTATGGGTCTCTATATAACGTTTCA 57.298 34.615 5.91 0.00 0.00 2.69
184 185 9.543231 CCCTGTTTTAGTATGGGTCTCTATATA 57.457 37.037 0.00 0.00 33.49 0.86
185 186 8.239478 TCCCTGTTTTAGTATGGGTCTCTATAT 58.761 37.037 0.00 0.00 38.95 0.86
187 188 6.326843 GTCCCTGTTTTAGTATGGGTCTCTAT 59.673 42.308 0.00 0.00 38.95 1.98
188 189 5.659971 GTCCCTGTTTTAGTATGGGTCTCTA 59.340 44.000 0.00 0.00 38.95 2.43
189 190 4.470304 GTCCCTGTTTTAGTATGGGTCTCT 59.530 45.833 0.00 0.00 38.95 3.10
190 191 4.470304 AGTCCCTGTTTTAGTATGGGTCTC 59.530 45.833 0.00 0.00 38.95 3.36
192 193 4.514401 CAGTCCCTGTTTTAGTATGGGTC 58.486 47.826 0.00 0.00 38.95 4.46
194 195 3.279434 GCAGTCCCTGTTTTAGTATGGG 58.721 50.000 0.00 0.00 39.22 4.00
195 196 2.936498 CGCAGTCCCTGTTTTAGTATGG 59.064 50.000 0.00 0.00 33.43 2.74
196 197 2.936498 CCGCAGTCCCTGTTTTAGTATG 59.064 50.000 0.00 0.00 33.43 2.39
197 198 2.093128 CCCGCAGTCCCTGTTTTAGTAT 60.093 50.000 0.00 0.00 33.43 2.12
199 200 0.036306 CCCGCAGTCCCTGTTTTAGT 59.964 55.000 0.00 0.00 33.43 2.24
201 202 0.475044 AACCCGCAGTCCCTGTTTTA 59.525 50.000 0.00 0.00 33.43 1.52
202 203 1.106944 CAACCCGCAGTCCCTGTTTT 61.107 55.000 0.00 0.00 33.43 2.43
203 204 1.528309 CAACCCGCAGTCCCTGTTT 60.528 57.895 0.00 0.00 33.43 2.83
204 205 1.779061 ATCAACCCGCAGTCCCTGTT 61.779 55.000 0.00 0.00 33.43 3.16
205 206 1.779061 AATCAACCCGCAGTCCCTGT 61.779 55.000 0.00 0.00 33.43 4.00
206 207 0.609131 AAATCAACCCGCAGTCCCTG 60.609 55.000 0.00 0.00 34.12 4.45
207 208 0.112412 AAAATCAACCCGCAGTCCCT 59.888 50.000 0.00 0.00 0.00 4.20
224 225 6.422344 AAAAAGCCCCTCGGTTTATAAAAA 57.578 33.333 0.00 0.00 41.28 1.94
226 227 4.156373 CGAAAAAGCCCCTCGGTTTATAAA 59.844 41.667 0.00 0.00 41.28 1.40
227 228 3.690628 CGAAAAAGCCCCTCGGTTTATAA 59.309 43.478 0.00 0.00 41.28 0.98
228 229 3.272581 CGAAAAAGCCCCTCGGTTTATA 58.727 45.455 0.00 0.00 41.28 0.98
229 230 2.089201 CGAAAAAGCCCCTCGGTTTAT 58.911 47.619 0.00 0.00 41.28 1.40
230 231 1.525941 CGAAAAAGCCCCTCGGTTTA 58.474 50.000 0.00 0.00 41.28 2.01
231 232 1.802337 GCGAAAAAGCCCCTCGGTTT 61.802 55.000 0.00 0.00 43.98 3.27
232 233 2.265904 GCGAAAAAGCCCCTCGGTT 61.266 57.895 0.00 0.00 33.23 4.44
233 234 2.671963 GCGAAAAAGCCCCTCGGT 60.672 61.111 0.00 0.00 33.23 4.69
234 235 1.801309 TTTGCGAAAAAGCCCCTCGG 61.801 55.000 0.00 0.00 36.02 4.63
235 236 0.031449 TTTTGCGAAAAAGCCCCTCG 59.969 50.000 0.00 0.00 36.02 4.63
237 238 0.249280 CGTTTTGCGAAAAAGCCCCT 60.249 50.000 0.18 0.00 44.77 4.79
239 240 1.562691 GCGTTTTGCGAAAAAGCCC 59.437 52.632 0.18 0.00 45.83 5.19
249 250 4.007940 TCGTCGCTGGCGTTTTGC 62.008 61.111 14.55 1.65 45.38 3.68
250 251 2.127758 GTCGTCGCTGGCGTTTTG 60.128 61.111 14.55 4.00 40.74 2.44
251 252 2.586635 TGTCGTCGCTGGCGTTTT 60.587 55.556 14.55 0.00 40.74 2.43
252 253 3.036084 CTGTCGTCGCTGGCGTTT 61.036 61.111 14.55 0.00 40.74 3.60
253 254 3.973516 TCTGTCGTCGCTGGCGTT 61.974 61.111 14.55 0.00 40.74 4.84
254 255 4.702081 GTCTGTCGTCGCTGGCGT 62.702 66.667 14.55 0.00 40.74 5.68
256 257 4.400109 TCGTCTGTCGTCGCTGGC 62.400 66.667 0.00 0.00 40.80 4.85
257 258 2.502080 GTCGTCTGTCGTCGCTGG 60.502 66.667 0.00 0.00 40.80 4.85
258 259 2.502080 GGTCGTCTGTCGTCGCTG 60.502 66.667 0.00 0.00 40.80 5.18
259 260 2.967473 CTGGTCGTCTGTCGTCGCT 61.967 63.158 0.00 0.00 40.80 4.93
260 261 2.453773 TTCTGGTCGTCTGTCGTCGC 62.454 60.000 0.00 0.00 40.80 5.19
261 262 0.452950 CTTCTGGTCGTCTGTCGTCG 60.453 60.000 0.00 0.00 40.80 5.12
264 265 1.004277 GTGCTTCTGGTCGTCTGTCG 61.004 60.000 0.00 0.00 41.41 4.35
267 268 0.389166 GGAGTGCTTCTGGTCGTCTG 60.389 60.000 0.00 0.00 0.00 3.51
268 269 1.867919 CGGAGTGCTTCTGGTCGTCT 61.868 60.000 0.00 0.00 0.00 4.18
269 270 1.444553 CGGAGTGCTTCTGGTCGTC 60.445 63.158 0.00 0.00 0.00 4.20
270 271 2.201022 ACGGAGTGCTTCTGGTCGT 61.201 57.895 3.27 0.00 42.51 4.34
271 272 2.651361 ACGGAGTGCTTCTGGTCG 59.349 61.111 3.27 0.00 42.51 4.79
377 378 8.239998 CGCATCAATAGTCACATCTCTTATCTA 58.760 37.037 0.00 0.00 0.00 1.98
378 379 7.089538 CGCATCAATAGTCACATCTCTTATCT 58.910 38.462 0.00 0.00 0.00 1.98
379 380 6.309980 CCGCATCAATAGTCACATCTCTTATC 59.690 42.308 0.00 0.00 0.00 1.75
380 381 6.162079 CCGCATCAATAGTCACATCTCTTAT 58.838 40.000 0.00 0.00 0.00 1.73
381 382 5.509670 CCCGCATCAATAGTCACATCTCTTA 60.510 44.000 0.00 0.00 0.00 2.10
383 384 3.244009 CCCGCATCAATAGTCACATCTCT 60.244 47.826 0.00 0.00 0.00 3.10
386 387 2.838736 ACCCGCATCAATAGTCACATC 58.161 47.619 0.00 0.00 0.00 3.06
387 388 3.281727 AACCCGCATCAATAGTCACAT 57.718 42.857 0.00 0.00 0.00 3.21
388 389 2.779755 AACCCGCATCAATAGTCACA 57.220 45.000 0.00 0.00 0.00 3.58
389 390 3.006940 TGAAACCCGCATCAATAGTCAC 58.993 45.455 0.00 0.00 0.00 3.67
390 391 3.342377 TGAAACCCGCATCAATAGTCA 57.658 42.857 0.00 0.00 0.00 3.41
391 392 6.371809 TTTATGAAACCCGCATCAATAGTC 57.628 37.500 0.00 0.00 0.00 2.59
394 395 5.888724 TCCTTTTATGAAACCCGCATCAATA 59.111 36.000 0.00 0.00 0.00 1.90
395 396 4.709397 TCCTTTTATGAAACCCGCATCAAT 59.291 37.500 0.00 0.00 0.00 2.57
397 398 3.442273 GTCCTTTTATGAAACCCGCATCA 59.558 43.478 0.00 0.00 0.00 3.07
398 399 3.442273 TGTCCTTTTATGAAACCCGCATC 59.558 43.478 0.00 0.00 0.00 3.91
400 401 2.865079 TGTCCTTTTATGAAACCCGCA 58.135 42.857 0.00 0.00 0.00 5.69
401 402 3.926821 TTGTCCTTTTATGAAACCCGC 57.073 42.857 0.00 0.00 0.00 6.13
402 403 7.151976 AGATTTTTGTCCTTTTATGAAACCCG 58.848 34.615 0.00 0.00 0.00 5.28
403 404 8.902540 AAGATTTTTGTCCTTTTATGAAACCC 57.097 30.769 0.00 0.00 0.00 4.11
408 409 9.187455 GCGTAAAAGATTTTTGTCCTTTTATGA 57.813 29.630 20.90 0.00 44.25 2.15
409 410 8.153411 CGCGTAAAAGATTTTTGTCCTTTTATG 58.847 33.333 15.91 15.91 44.28 1.90
411 412 7.416022 TCGCGTAAAAGATTTTTGTCCTTTTA 58.584 30.769 5.77 0.00 39.77 1.52
414 415 5.427036 TCGCGTAAAAGATTTTTGTCCTT 57.573 34.783 5.77 0.00 0.00 3.36
416 417 4.156182 CCTCGCGTAAAAGATTTTTGTCC 58.844 43.478 5.77 0.00 0.00 4.02
418 419 3.057806 CCCCTCGCGTAAAAGATTTTTGT 60.058 43.478 5.77 0.00 0.00 2.83
419 420 3.498082 CCCCTCGCGTAAAAGATTTTTG 58.502 45.455 5.77 0.00 0.00 2.44
420 421 2.490509 CCCCCTCGCGTAAAAGATTTTT 59.509 45.455 5.77 0.00 0.00 1.94
422 423 1.279846 TCCCCCTCGCGTAAAAGATTT 59.720 47.619 5.77 0.00 0.00 2.17
423 424 0.906775 TCCCCCTCGCGTAAAAGATT 59.093 50.000 5.77 0.00 0.00 2.40
425 426 0.686224 TTTCCCCCTCGCGTAAAAGA 59.314 50.000 5.77 0.00 0.00 2.52
426 427 1.525941 TTTTCCCCCTCGCGTAAAAG 58.474 50.000 5.77 0.00 0.00 2.27
427 428 1.978454 TTTTTCCCCCTCGCGTAAAA 58.022 45.000 5.77 2.43 0.00 1.52
429 430 1.003349 TGATTTTTCCCCCTCGCGTAA 59.997 47.619 5.77 0.00 0.00 3.18
430 431 0.614294 TGATTTTTCCCCCTCGCGTA 59.386 50.000 5.77 0.00 0.00 4.42
431 432 0.250989 TTGATTTTTCCCCCTCGCGT 60.251 50.000 5.77 0.00 0.00 6.01
432 433 0.885196 TTTGATTTTTCCCCCTCGCG 59.115 50.000 0.00 0.00 0.00 5.87
433 434 2.683968 GTTTTGATTTTTCCCCCTCGC 58.316 47.619 0.00 0.00 0.00 5.03
434 435 2.554893 TCGTTTTGATTTTTCCCCCTCG 59.445 45.455 0.00 0.00 0.00 4.63
435 436 4.279922 TCTTCGTTTTGATTTTTCCCCCTC 59.720 41.667 0.00 0.00 0.00 4.30
436 437 4.219919 TCTTCGTTTTGATTTTTCCCCCT 58.780 39.130 0.00 0.00 0.00 4.79
437 438 4.279922 TCTCTTCGTTTTGATTTTTCCCCC 59.720 41.667 0.00 0.00 0.00 5.40
438 439 5.447624 TCTCTTCGTTTTGATTTTTCCCC 57.552 39.130 0.00 0.00 0.00 4.81
439 440 5.240844 TCCTCTCTTCGTTTTGATTTTTCCC 59.759 40.000 0.00 0.00 0.00 3.97
440 441 6.313744 TCCTCTCTTCGTTTTGATTTTTCC 57.686 37.500 0.00 0.00 0.00 3.13
441 442 7.639945 TCTTCCTCTCTTCGTTTTGATTTTTC 58.360 34.615 0.00 0.00 0.00 2.29
445 446 5.241662 CCTCTTCCTCTCTTCGTTTTGATT 58.758 41.667 0.00 0.00 0.00 2.57
446 447 4.826556 CCTCTTCCTCTCTTCGTTTTGAT 58.173 43.478 0.00 0.00 0.00 2.57
448 449 2.739379 GCCTCTTCCTCTCTTCGTTTTG 59.261 50.000 0.00 0.00 0.00 2.44
449 450 2.368875 TGCCTCTTCCTCTCTTCGTTTT 59.631 45.455 0.00 0.00 0.00 2.43
450 451 1.971357 TGCCTCTTCCTCTCTTCGTTT 59.029 47.619 0.00 0.00 0.00 3.60
452 453 1.181786 CTGCCTCTTCCTCTCTTCGT 58.818 55.000 0.00 0.00 0.00 3.85
453 454 0.459489 CCTGCCTCTTCCTCTCTTCG 59.541 60.000 0.00 0.00 0.00 3.79
454 455 1.859302 TCCTGCCTCTTCCTCTCTTC 58.141 55.000 0.00 0.00 0.00 2.87
457 458 1.756538 CTCTTCCTGCCTCTTCCTCTC 59.243 57.143 0.00 0.00 0.00 3.20
460 461 0.620121 CCCTCTTCCTGCCTCTTCCT 60.620 60.000 0.00 0.00 0.00 3.36
462 463 0.829990 CTCCCTCTTCCTGCCTCTTC 59.170 60.000 0.00 0.00 0.00 2.87
463 464 0.118144 ACTCCCTCTTCCTGCCTCTT 59.882 55.000 0.00 0.00 0.00 2.85
464 465 0.617249 CACTCCCTCTTCCTGCCTCT 60.617 60.000 0.00 0.00 0.00 3.69
467 468 1.298014 CACACTCCCTCTTCCTGCC 59.702 63.158 0.00 0.00 0.00 4.85
468 469 1.267121 TACACACTCCCTCTTCCTGC 58.733 55.000 0.00 0.00 0.00 4.85
469 470 3.165875 TCTTACACACTCCCTCTTCCTG 58.834 50.000 0.00 0.00 0.00 3.86
470 471 3.544698 TCTTACACACTCCCTCTTCCT 57.455 47.619 0.00 0.00 0.00 3.36
471 472 4.508662 CAATCTTACACACTCCCTCTTCC 58.491 47.826 0.00 0.00 0.00 3.46
473 474 4.020128 GTCCAATCTTACACACTCCCTCTT 60.020 45.833 0.00 0.00 0.00 2.85
474 475 3.515901 GTCCAATCTTACACACTCCCTCT 59.484 47.826 0.00 0.00 0.00 3.69
476 477 2.233922 CGTCCAATCTTACACACTCCCT 59.766 50.000 0.00 0.00 0.00 4.20
477 478 2.232941 TCGTCCAATCTTACACACTCCC 59.767 50.000 0.00 0.00 0.00 4.30
479 480 3.927142 CCTTCGTCCAATCTTACACACTC 59.073 47.826 0.00 0.00 0.00 3.51
483 484 2.921754 CGTCCTTCGTCCAATCTTACAC 59.078 50.000 0.00 0.00 34.52 2.90
484 485 2.094390 CCGTCCTTCGTCCAATCTTACA 60.094 50.000 0.00 0.00 37.94 2.41
486 487 2.165030 GTCCGTCCTTCGTCCAATCTTA 59.835 50.000 0.00 0.00 37.94 2.10
487 488 1.067071 GTCCGTCCTTCGTCCAATCTT 60.067 52.381 0.00 0.00 37.94 2.40
489 490 0.801067 CGTCCGTCCTTCGTCCAATC 60.801 60.000 0.00 0.00 37.94 2.67
490 491 1.214589 CGTCCGTCCTTCGTCCAAT 59.785 57.895 0.00 0.00 37.94 3.16
491 492 2.646719 CGTCCGTCCTTCGTCCAA 59.353 61.111 0.00 0.00 37.94 3.53
492 493 3.367743 CCGTCCGTCCTTCGTCCA 61.368 66.667 0.00 0.00 37.94 4.02
493 494 3.058160 TCCGTCCGTCCTTCGTCC 61.058 66.667 0.00 0.00 37.94 4.79
494 495 2.177778 GTCCGTCCGTCCTTCGTC 59.822 66.667 0.00 0.00 37.94 4.20
495 496 3.730761 CGTCCGTCCGTCCTTCGT 61.731 66.667 0.00 0.00 37.94 3.85
497 498 3.058160 TCCGTCCGTCCGTCCTTC 61.058 66.667 0.00 0.00 0.00 3.46
501 502 4.157958 CTCGTCCGTCCGTCCGTC 62.158 72.222 0.00 0.00 0.00 4.79
502 503 4.687215 TCTCGTCCGTCCGTCCGT 62.687 66.667 0.00 0.00 0.00 4.69
503 504 3.862402 CTCTCGTCCGTCCGTCCG 61.862 72.222 0.00 0.00 0.00 4.79
504 505 2.435586 TCTCTCGTCCGTCCGTCC 60.436 66.667 0.00 0.00 0.00 4.79
505 506 2.748843 GGTCTCTCGTCCGTCCGTC 61.749 68.421 0.00 0.00 0.00 4.79
506 507 2.745492 GGTCTCTCGTCCGTCCGT 60.745 66.667 0.00 0.00 0.00 4.69
507 508 3.862402 CGGTCTCTCGTCCGTCCG 61.862 72.222 0.00 0.00 41.58 4.79
508 509 3.507009 CCGGTCTCTCGTCCGTCC 61.507 72.222 0.00 0.00 44.51 4.79
509 510 2.435586 TCCGGTCTCTCGTCCGTC 60.436 66.667 0.00 0.00 44.51 4.79
510 511 2.436292 CTCCGGTCTCTCGTCCGT 60.436 66.667 0.00 0.00 44.51 4.69
511 512 2.125229 TCTCCGGTCTCTCGTCCG 60.125 66.667 0.00 0.00 45.42 4.79
512 513 0.812412 CTCTCTCCGGTCTCTCGTCC 60.812 65.000 0.00 0.00 0.00 4.79
514 515 1.222387 CCTCTCTCCGGTCTCTCGT 59.778 63.158 0.00 0.00 0.00 4.18
516 517 2.021457 CTTTCCTCTCTCCGGTCTCTC 58.979 57.143 0.00 0.00 0.00 3.20
518 519 2.131776 TCTTTCCTCTCTCCGGTCTC 57.868 55.000 0.00 0.00 0.00 3.36
519 520 2.763448 CAATCTTTCCTCTCTCCGGTCT 59.237 50.000 0.00 0.00 0.00 3.85
520 521 2.498078 ACAATCTTTCCTCTCTCCGGTC 59.502 50.000 0.00 0.00 0.00 4.79
521 522 2.234908 CACAATCTTTCCTCTCTCCGGT 59.765 50.000 0.00 0.00 0.00 5.28
522 523 2.419297 CCACAATCTTTCCTCTCTCCGG 60.419 54.545 0.00 0.00 0.00 5.14
523 524 2.234908 ACCACAATCTTTCCTCTCTCCG 59.765 50.000 0.00 0.00 0.00 4.63
524 525 3.604582 CACCACAATCTTTCCTCTCTCC 58.395 50.000 0.00 0.00 0.00 3.71
527 528 2.087646 GCCACCACAATCTTTCCTCTC 58.912 52.381 0.00 0.00 0.00 3.20
529 530 1.177401 GGCCACCACAATCTTTCCTC 58.823 55.000 0.00 0.00 0.00 3.71
530 531 0.482446 TGGCCACCACAATCTTTCCT 59.518 50.000 0.00 0.00 0.00 3.36
531 532 3.050089 TGGCCACCACAATCTTTCC 57.950 52.632 0.00 0.00 0.00 3.13
542 543 2.784889 TAAACCTACGCGTGGCCACC 62.785 60.000 29.95 20.55 0.00 4.61
543 544 0.741927 ATAAACCTACGCGTGGCCAC 60.742 55.000 26.78 26.78 0.00 5.01
547 548 3.772932 TGAACTATAAACCTACGCGTGG 58.227 45.455 24.59 20.44 0.00 4.94
549 550 5.252969 TCATGAACTATAAACCTACGCGT 57.747 39.130 19.17 19.17 0.00 6.01
550 551 6.255020 ACTTTCATGAACTATAAACCTACGCG 59.745 38.462 7.89 3.53 0.00 6.01
551 552 7.535489 ACTTTCATGAACTATAAACCTACGC 57.465 36.000 7.89 0.00 0.00 4.42
552 553 7.903431 GCAACTTTCATGAACTATAAACCTACG 59.097 37.037 7.89 0.00 0.00 3.51
553 554 8.182227 GGCAACTTTCATGAACTATAAACCTAC 58.818 37.037 7.89 0.00 0.00 3.18
554 555 7.885922 TGGCAACTTTCATGAACTATAAACCTA 59.114 33.333 7.89 0.00 37.61 3.08
555 556 6.719370 TGGCAACTTTCATGAACTATAAACCT 59.281 34.615 7.89 0.00 37.61 3.50
556 557 6.919721 TGGCAACTTTCATGAACTATAAACC 58.080 36.000 7.89 5.05 37.61 3.27
557 558 6.528072 GCTGGCAACTTTCATGAACTATAAAC 59.472 38.462 7.89 0.00 37.61 2.01
558 559 6.620678 GCTGGCAACTTTCATGAACTATAAA 58.379 36.000 7.89 0.00 37.61 1.40
559 560 5.163764 CGCTGGCAACTTTCATGAACTATAA 60.164 40.000 7.89 0.00 37.61 0.98
560 561 4.332543 CGCTGGCAACTTTCATGAACTATA 59.667 41.667 7.89 0.00 37.61 1.31
561 562 3.127548 CGCTGGCAACTTTCATGAACTAT 59.872 43.478 7.89 0.00 37.61 2.12
562 563 2.483877 CGCTGGCAACTTTCATGAACTA 59.516 45.455 7.89 0.00 37.61 2.24
564 565 1.001378 ACGCTGGCAACTTTCATGAAC 60.001 47.619 7.89 0.00 37.61 3.18
567 568 0.877071 AGACGCTGGCAACTTTCATG 59.123 50.000 0.00 0.00 37.61 3.07
568 569 0.877071 CAGACGCTGGCAACTTTCAT 59.123 50.000 0.00 0.00 37.61 2.57
569 570 0.463654 ACAGACGCTGGCAACTTTCA 60.464 50.000 10.80 0.00 35.51 2.69
570 571 0.235926 GACAGACGCTGGCAACTTTC 59.764 55.000 7.69 0.00 39.71 2.62
571 572 0.179045 AGACAGACGCTGGCAACTTT 60.179 50.000 13.93 0.00 42.99 2.66
572 573 0.179045 AAGACAGACGCTGGCAACTT 60.179 50.000 13.93 9.08 42.99 2.66
573 574 0.882042 CAAGACAGACGCTGGCAACT 60.882 55.000 13.93 4.64 42.99 3.16
574 575 1.571460 CAAGACAGACGCTGGCAAC 59.429 57.895 13.93 0.00 42.99 4.17
576 577 2.666190 GCAAGACAGACGCTGGCA 60.666 61.111 13.93 0.00 42.99 4.92
577 578 3.782244 CGCAAGACAGACGCTGGC 61.782 66.667 10.80 7.98 40.37 4.85
578 579 3.114616 CCGCAAGACAGACGCTGG 61.115 66.667 10.80 0.00 43.02 4.85
579 580 3.782244 GCCGCAAGACAGACGCTG 61.782 66.667 5.47 5.47 43.02 5.18
580 581 3.923563 GAGCCGCAAGACAGACGCT 62.924 63.158 0.00 0.00 43.02 5.07
581 582 2.543687 TAGAGCCGCAAGACAGACGC 62.544 60.000 0.00 0.00 43.02 5.19
583 584 0.243907 TGTAGAGCCGCAAGACAGAC 59.756 55.000 0.00 0.00 43.02 3.51
584 585 0.966179 TTGTAGAGCCGCAAGACAGA 59.034 50.000 0.00 0.00 43.02 3.41
585 586 1.795768 TTTGTAGAGCCGCAAGACAG 58.204 50.000 0.00 0.00 43.02 3.51
586 587 2.248280 TTTTGTAGAGCCGCAAGACA 57.752 45.000 0.00 0.00 43.02 3.41
587 588 3.682858 TGTATTTTGTAGAGCCGCAAGAC 59.317 43.478 0.00 0.00 43.02 3.01
588 589 3.932822 TGTATTTTGTAGAGCCGCAAGA 58.067 40.909 0.00 0.00 43.02 3.02
589 590 4.437390 CCTTGTATTTTGTAGAGCCGCAAG 60.437 45.833 0.00 0.00 0.00 4.01
590 591 3.438781 CCTTGTATTTTGTAGAGCCGCAA 59.561 43.478 0.00 0.00 0.00 4.85
591 592 3.006940 CCTTGTATTTTGTAGAGCCGCA 58.993 45.455 0.00 0.00 0.00 5.69
592 593 2.223272 GCCTTGTATTTTGTAGAGCCGC 60.223 50.000 0.00 0.00 0.00 6.53
593 594 2.354821 GGCCTTGTATTTTGTAGAGCCG 59.645 50.000 0.00 0.00 0.00 5.52
594 595 2.354821 CGGCCTTGTATTTTGTAGAGCC 59.645 50.000 0.00 0.00 34.50 4.70
596 597 3.181510 GCACGGCCTTGTATTTTGTAGAG 60.182 47.826 11.38 0.00 0.00 2.43
599 600 2.226912 GTGCACGGCCTTGTATTTTGTA 59.773 45.455 11.38 0.00 0.00 2.41
601 602 1.000827 TGTGCACGGCCTTGTATTTTG 60.001 47.619 13.13 0.00 0.00 2.44
602 603 1.000717 GTGTGCACGGCCTTGTATTTT 60.001 47.619 13.13 0.00 0.00 1.82
604 605 1.241315 GGTGTGCACGGCCTTGTATT 61.241 55.000 19.30 0.00 0.00 1.89
607 608 3.790416 ATGGTGTGCACGGCCTTGT 62.790 57.895 24.50 12.26 0.00 3.16
608 609 2.985282 ATGGTGTGCACGGCCTTG 60.985 61.111 24.50 4.51 0.00 3.61
609 610 2.985282 CATGGTGTGCACGGCCTT 60.985 61.111 24.50 18.05 0.00 4.35
611 612 4.041917 CACATGGTGTGCACGGCC 62.042 66.667 19.64 19.64 41.89 6.13
621 622 6.708054 TCAACAAAGAAAAACAAACACATGGT 59.292 30.769 0.00 0.00 0.00 3.55
623 624 8.441608 TCATCAACAAAGAAAAACAAACACATG 58.558 29.630 0.00 0.00 0.00 3.21
624 625 8.545229 TCATCAACAAAGAAAAACAAACACAT 57.455 26.923 0.00 0.00 0.00 3.21
625 626 7.869937 TCTCATCAACAAAGAAAAACAAACACA 59.130 29.630 0.00 0.00 0.00 3.72
626 627 8.238481 TCTCATCAACAAAGAAAAACAAACAC 57.762 30.769 0.00 0.00 0.00 3.32
627 628 8.824159 TTCTCATCAACAAAGAAAAACAAACA 57.176 26.923 0.00 0.00 0.00 2.83
628 629 9.139174 TCTTCTCATCAACAAAGAAAAACAAAC 57.861 29.630 0.00 0.00 0.00 2.93
629 630 9.874205 ATCTTCTCATCAACAAAGAAAAACAAA 57.126 25.926 0.00 0.00 31.98 2.83
630 631 9.874205 AATCTTCTCATCAACAAAGAAAAACAA 57.126 25.926 0.00 0.00 31.98 2.83
635 636 7.964559 CGCATAATCTTCTCATCAACAAAGAAA 59.035 33.333 0.00 0.00 31.98 2.52
636 637 7.466805 CGCATAATCTTCTCATCAACAAAGAA 58.533 34.615 0.00 0.00 31.98 2.52
638 639 5.680229 GCGCATAATCTTCTCATCAACAAAG 59.320 40.000 0.30 0.00 0.00 2.77
639 640 5.123661 TGCGCATAATCTTCTCATCAACAAA 59.876 36.000 5.66 0.00 0.00 2.83
640 641 4.635324 TGCGCATAATCTTCTCATCAACAA 59.365 37.500 5.66 0.00 0.00 2.83
641 642 4.190772 TGCGCATAATCTTCTCATCAACA 58.809 39.130 5.66 0.00 0.00 3.33
642 643 4.801147 TGCGCATAATCTTCTCATCAAC 57.199 40.909 5.66 0.00 0.00 3.18
643 644 5.058490 TGATGCGCATAATCTTCTCATCAA 58.942 37.500 25.40 0.00 36.79 2.57
644 645 4.634199 TGATGCGCATAATCTTCTCATCA 58.366 39.130 25.40 10.51 37.20 3.07
647 648 4.212636 CACATGATGCGCATAATCTTCTCA 59.787 41.667 25.40 15.86 34.82 3.27
648 649 4.212847 ACACATGATGCGCATAATCTTCTC 59.787 41.667 25.40 9.85 34.82 2.87
649 650 4.132336 ACACATGATGCGCATAATCTTCT 58.868 39.130 25.40 0.00 34.82 2.85
650 651 4.478843 ACACATGATGCGCATAATCTTC 57.521 40.909 25.40 11.50 34.82 2.87
653 654 3.302555 CCAACACATGATGCGCATAATC 58.697 45.455 25.40 13.18 34.82 1.75
654 655 2.544277 GCCAACACATGATGCGCATAAT 60.544 45.455 25.40 19.93 34.82 1.28
656 657 0.381445 GCCAACACATGATGCGCATA 59.619 50.000 25.40 12.30 34.82 3.14
657 658 1.140161 GCCAACACATGATGCGCAT 59.860 52.632 25.66 25.66 37.85 4.73
658 659 2.567569 GCCAACACATGATGCGCA 59.432 55.556 14.96 14.96 0.00 6.09
659 660 2.202650 GGCCAACACATGATGCGC 60.203 61.111 0.00 0.00 0.00 6.09
660 661 3.276109 TGGCCAACACATGATGCG 58.724 55.556 0.61 0.00 0.00 4.73
687 3862 1.248101 ACGGGCAGTATTGTTTGGGC 61.248 55.000 0.00 0.00 0.00 5.36
703 3879 1.517257 GATCAGACTGCGGACACGG 60.517 63.158 0.00 0.00 41.36 4.94
710 3886 4.677378 CCGATTTAGTAAGATCAGACTGCG 59.323 45.833 9.22 7.63 0.00 5.18
746 3922 4.514577 CGCGTAGGCAGGTGGAGG 62.515 72.222 8.32 0.00 39.92 4.30
818 3994 1.443702 GGCGCCGTTAAAGCAAAGG 60.444 57.895 12.58 0.00 38.68 3.11
832 4008 4.459089 GAGACTGTGGGAGGGCGC 62.459 72.222 0.00 0.00 0.00 6.53
836 4012 2.350522 CGAAAATGAGACTGTGGGAGG 58.649 52.381 0.00 0.00 0.00 4.30
986 4165 1.742768 GCCATACCGAGAGAGGGTG 59.257 63.158 0.00 0.00 38.50 4.61
1161 4349 4.507916 TCCTCCTCCTCCTCGGCG 62.508 72.222 0.00 0.00 0.00 6.46
1171 4359 0.041982 ACCACCTTCTCCTCCTCCTC 59.958 60.000 0.00 0.00 0.00 3.71
1172 4360 0.252467 CACCACCTTCTCCTCCTCCT 60.252 60.000 0.00 0.00 0.00 3.69
1173 4361 0.545548 ACACCACCTTCTCCTCCTCC 60.546 60.000 0.00 0.00 0.00 4.30
1190 4378 2.962786 CGGTCACCGCGAACAACA 60.963 61.111 8.23 0.00 41.17 3.33
1357 4545 2.414250 TGAGGAAGGGCCCAAAAATT 57.586 45.000 27.56 9.15 37.37 1.82
1377 4565 2.076100 CTGAGCGTGCTTAACAATGGA 58.924 47.619 0.00 0.00 0.00 3.41
1378 4566 1.466360 GCTGAGCGTGCTTAACAATGG 60.466 52.381 0.00 0.00 0.00 3.16
1379 4567 1.466360 GGCTGAGCGTGCTTAACAATG 60.466 52.381 0.00 0.00 0.00 2.82
1437 4636 2.171870 TCCTAAATTCATCCGACCCCAC 59.828 50.000 0.00 0.00 0.00 4.61
1462 4661 1.921243 TAATCACACGCGACCATCTG 58.079 50.000 15.93 0.68 0.00 2.90
1511 4710 6.857956 ACAACTGTACAACAAAAGTATGCAA 58.142 32.000 0.00 0.00 0.00 4.08
1524 4723 7.231925 TCCTTGTACTCATCTACAACTGTACAA 59.768 37.037 13.43 13.43 43.77 2.41
1561 4760 1.209127 CCACGCCCAAACGATGAAC 59.791 57.895 0.00 0.00 36.70 3.18
1593 4792 2.293677 TGACGTATAAGCACAGGCAG 57.706 50.000 0.00 0.00 44.61 4.85
1594 4793 2.028476 ACTTGACGTATAAGCACAGGCA 60.028 45.455 10.90 0.00 44.61 4.75
1595 4794 2.603560 GACTTGACGTATAAGCACAGGC 59.396 50.000 10.90 0.00 41.61 4.85
1596 4795 3.612860 GTGACTTGACGTATAAGCACAGG 59.387 47.826 21.00 6.69 34.89 4.00
1740 4941 7.445096 CCCAAAGTATGATATGCACACTCATAA 59.555 37.037 13.39 0.83 31.78 1.90
1744 4945 4.516698 CCCCAAAGTATGATATGCACACTC 59.483 45.833 0.00 0.00 31.78 3.51
1745 4946 4.165950 TCCCCAAAGTATGATATGCACACT 59.834 41.667 0.00 0.00 35.27 3.55
1746 4947 4.460263 TCCCCAAAGTATGATATGCACAC 58.540 43.478 0.00 0.00 0.00 3.82
1748 4949 6.711277 TCTATCCCCAAAGTATGATATGCAC 58.289 40.000 0.00 0.00 0.00 4.57
1749 4950 6.950860 TCTATCCCCAAAGTATGATATGCA 57.049 37.500 0.00 0.00 0.00 3.96
1756 4957 9.965902 AAAGCTATAATCTATCCCCAAAGTATG 57.034 33.333 0.00 0.00 0.00 2.39
1763 4964 9.661954 CCTCTATAAAGCTATAATCTATCCCCA 57.338 37.037 0.00 0.00 0.00 4.96
1764 4965 8.590204 GCCTCTATAAAGCTATAATCTATCCCC 58.410 40.741 0.00 0.00 0.00 4.81
1765 4966 9.148879 TGCCTCTATAAAGCTATAATCTATCCC 57.851 37.037 0.00 0.00 0.00 3.85
1770 4971 9.171877 GCATTTGCCTCTATAAAGCTATAATCT 57.828 33.333 0.00 0.00 34.31 2.40
1771 4972 8.119226 CGCATTTGCCTCTATAAAGCTATAATC 58.881 37.037 0.00 0.00 37.91 1.75
1772 4973 7.607991 ACGCATTTGCCTCTATAAAGCTATAAT 59.392 33.333 0.00 0.00 37.91 1.28
1773 4974 6.934645 ACGCATTTGCCTCTATAAAGCTATAA 59.065 34.615 0.00 0.00 37.91 0.98
1774 4975 6.464222 ACGCATTTGCCTCTATAAAGCTATA 58.536 36.000 0.00 0.00 37.91 1.31
1775 4976 5.308825 ACGCATTTGCCTCTATAAAGCTAT 58.691 37.500 0.00 0.00 37.91 2.97
1776 4977 4.703897 ACGCATTTGCCTCTATAAAGCTA 58.296 39.130 0.00 0.00 37.91 3.32
1777 4978 3.545703 ACGCATTTGCCTCTATAAAGCT 58.454 40.909 0.00 0.00 37.91 3.74
1778 4979 3.604772 CGACGCATTTGCCTCTATAAAGC 60.605 47.826 0.00 0.00 37.91 3.51
1779 4980 3.604772 GCGACGCATTTGCCTCTATAAAG 60.605 47.826 16.42 0.00 37.91 1.85
1817 5018 6.386927 CCAGATATATACTGCCTAAATCCCCA 59.613 42.308 0.00 0.00 34.47 4.96
1818 5019 6.183361 CCCAGATATATACTGCCTAAATCCCC 60.183 46.154 0.00 0.00 34.47 4.81
1822 5023 8.917414 TTCTCCCAGATATATACTGCCTAAAT 57.083 34.615 0.00 0.00 34.47 1.40
1926 5196 3.070015 CCAATTAAGGCCACATGAATCCC 59.930 47.826 5.01 0.00 0.00 3.85
1971 5241 0.472161 GGGCCACCACCCCTTTAAAA 60.472 55.000 4.39 0.00 45.00 1.52
1991 5261 8.490355 CAAAGTCAATAAATGCAAGAACTTTCC 58.510 33.333 0.00 0.00 32.05 3.13
2038 5308 5.698089 TCACATCAGAAGCAAAGTTGTCTAG 59.302 40.000 0.00 0.00 0.00 2.43
2042 5312 5.343249 GTTTCACATCAGAAGCAAAGTTGT 58.657 37.500 0.00 0.00 0.00 3.32
2224 5494 9.332502 TCTGCACTTATAGTCAAAAACTTGTAA 57.667 29.630 0.00 0.00 39.55 2.41
2225 5495 8.896320 TCTGCACTTATAGTCAAAAACTTGTA 57.104 30.769 0.00 0.00 39.55 2.41
2235 5505 5.703876 CATCGCTATCTGCACTTATAGTCA 58.296 41.667 7.47 0.00 43.06 3.41
2236 5506 4.560819 GCATCGCTATCTGCACTTATAGTC 59.439 45.833 7.47 1.70 43.06 2.59
2241 5511 3.126073 CAAGCATCGCTATCTGCACTTA 58.874 45.455 0.00 0.00 38.25 2.24
2297 5577 5.401674 CAGAGGTACGACACAAACTTAAGTC 59.598 44.000 8.95 0.00 0.00 3.01
2376 5656 1.143305 CACAAGAGCTCACAGGTTCG 58.857 55.000 17.77 0.00 0.00 3.95
2418 5698 1.752498 CACGGTGTACATAGGTAGCCA 59.248 52.381 0.00 0.00 0.00 4.75
2435 5715 5.702865 AGATCATTTTTCCATGTGAACACG 58.297 37.500 0.00 0.00 31.05 4.49
2439 5719 8.868522 AAGAGTAGATCATTTTTCCATGTGAA 57.131 30.769 0.00 0.00 0.00 3.18
2453 5733 2.025155 GGTCGCTGGAAGAGTAGATCA 58.975 52.381 0.00 0.00 34.36 2.92
2479 5761 5.336134 CCACAACCCGGTTATAAGGAAAAAG 60.336 44.000 1.43 0.00 0.00 2.27
2536 5818 4.398319 GGAGGAAGACCAAATGAACAGAA 58.602 43.478 0.00 0.00 38.94 3.02
2921 6205 3.845781 TGCTGAAATAGAGATGGACCC 57.154 47.619 0.00 0.00 0.00 4.46
2925 6209 5.944599 AGCCATTATGCTGAAATAGAGATGG 59.055 40.000 0.00 0.00 40.90 3.51
3147 6431 0.400594 AAAAAGGGCTCCGTGTAGCT 59.599 50.000 0.00 0.00 42.37 3.32
3178 6462 6.472686 TTTAGGTTGCCAAATACTGTGTTT 57.527 33.333 0.00 0.00 0.00 2.83
3202 6486 7.215789 ACATGCACAATTGTTTCCAGAATTTA 58.784 30.769 8.77 0.00 0.00 1.40
3218 6502 7.686438 AAAACATCTATCTGTACATGCACAA 57.314 32.000 0.00 0.00 0.00 3.33
3301 6585 6.349944 GCAGACATGAACTTCAATCTCCAAAT 60.350 38.462 0.00 0.00 0.00 2.32
3361 6645 4.726416 CTCCGAAACCAACATCTTCAATG 58.274 43.478 0.00 0.00 0.00 2.82
3527 6811 0.908910 TCCGCCTCTTCAATAGCCAA 59.091 50.000 0.00 0.00 0.00 4.52
3814 7098 1.203287 CCAGCTGACTCGATGACTTCA 59.797 52.381 17.39 0.00 0.00 3.02
3904 7188 2.809601 GACTGCCTGTACCGCGTG 60.810 66.667 4.92 0.00 0.00 5.34
4066 7350 3.153919 GCCAATTACAAACTGGACAGGA 58.846 45.455 4.14 0.00 31.38 3.86
4106 7390 3.758023 CCATGACACATTGCCTTGTAAGA 59.242 43.478 0.00 0.00 0.00 2.10
4380 7664 1.202031 CGCTTACAACATTCCCTTCGC 60.202 52.381 0.00 0.00 0.00 4.70
4480 7764 2.501316 GCTCTGGCCCCAAATAACAAAT 59.499 45.455 0.00 0.00 0.00 2.32
4597 7881 0.033796 ATGTTGCCCTGACATGGAGG 60.034 55.000 0.20 6.13 36.43 4.30
4612 7896 3.438087 CGCTCTCAGATCCAACAAATGTT 59.562 43.478 0.00 0.00 39.12 2.71
4654 7938 1.729586 TTTGGGCTGACTCTACCAGT 58.270 50.000 0.00 0.00 38.45 4.00
4657 7941 2.044123 CCATTTGGGCTGACTCTACC 57.956 55.000 0.00 0.00 0.00 3.18
4708 7992 4.852697 AGGGGGACAAAGACTTTAGAGATT 59.147 41.667 0.00 0.00 0.00 2.40
4711 7995 3.307762 CCAGGGGGACAAAGACTTTAGAG 60.308 52.174 0.00 0.00 35.59 2.43
4926 8210 3.194755 CGATCACCATAACCGATATCCCA 59.805 47.826 0.00 0.00 0.00 4.37
4998 8282 2.932234 CGAGGCACCGACTCCAGTT 61.932 63.158 0.00 0.00 33.37 3.16
5111 8395 9.986833 CAGATAATGTTCGTCAACAATATGAAA 57.013 29.630 3.12 0.00 45.78 2.69
5188 8472 3.443681 CGACAATAGGCTTTCCAATGGTT 59.556 43.478 0.00 0.00 33.74 3.67
5197 8481 4.839121 TGGTATTGACGACAATAGGCTTT 58.161 39.130 18.41 0.00 45.69 3.51
5295 8579 1.690893 AGACACTGCAGACACATGAGT 59.309 47.619 23.35 0.00 0.00 3.41
5296 8580 2.452295 AGACACTGCAGACACATGAG 57.548 50.000 23.35 0.00 0.00 2.90
5297 8581 2.366590 AGAAGACACTGCAGACACATGA 59.633 45.455 23.35 0.00 0.00 3.07
5298 8582 2.763933 AGAAGACACTGCAGACACATG 58.236 47.619 23.35 10.43 0.00 3.21
5399 8684 0.955919 GCTCCACTACGGCTTTTGCT 60.956 55.000 0.00 0.00 46.54 3.91
5402 8687 1.453155 CATGCTCCACTACGGCTTTT 58.547 50.000 0.00 0.00 33.14 2.27
5408 8693 0.108186 TCTTGGCATGCTCCACTACG 60.108 55.000 18.92 0.00 35.50 3.51
5409 8694 1.740025 GTTCTTGGCATGCTCCACTAC 59.260 52.381 18.92 5.71 35.50 2.73
5518 8803 0.318955 GTTGCCCACAATGACACTGC 60.319 55.000 0.00 0.00 38.27 4.40
5519 8804 1.031235 TGTTGCCCACAATGACACTG 58.969 50.000 0.00 0.00 38.27 3.66
5573 8858 1.480137 AGGATCTCTGAAGCTTCCACG 59.520 52.381 23.42 11.90 30.77 4.94
5913 9200 4.655963 ACAGCACCATCAGTCAAAGTAAT 58.344 39.130 0.00 0.00 0.00 1.89
5923 9210 1.293963 CCGTGTGACAGCACCATCAG 61.294 60.000 0.00 0.00 44.51 2.90
5941 9228 1.935933 CGTGGCTGTATCCTGTTACC 58.064 55.000 0.00 0.00 0.00 2.85
5991 9285 1.082679 CCAGACAGCTGCAGTGATCG 61.083 60.000 15.27 2.11 40.91 3.69
6011 9305 1.127701 CAACCATTGCGACGGTTTTG 58.872 50.000 0.47 0.00 42.99 2.44
6035 9329 2.582498 GGCGAGTCGTTGATCCCG 60.582 66.667 15.08 0.00 0.00 5.14
6221 9515 2.254546 TGCCGATGATGTTGTATCCC 57.745 50.000 0.00 0.00 0.00 3.85
6224 9518 2.783135 GGGATGCCGATGATGTTGTAT 58.217 47.619 0.00 0.00 0.00 2.29
6350 9644 2.428890 CCTCTTGTAGTACCTCAGCAGG 59.571 54.545 0.00 0.00 46.87 4.85
6396 9690 0.032815 GACGGCCCTCTTCTCTATGC 59.967 60.000 0.00 0.00 0.00 3.14
6437 9731 8.140628 ACAGATATCTACAGCTTATTCTGTGTG 58.859 37.037 4.54 0.84 45.95 3.82
6469 9767 1.654105 CTTCGTCATTCTACCACACGC 59.346 52.381 0.00 0.00 0.00 5.34
6571 9872 0.748005 AACCGGCACAGCATGATACC 60.748 55.000 0.00 0.00 39.69 2.73
6576 9877 4.465512 GCGAACCGGCACAGCATG 62.466 66.667 0.00 0.00 46.00 4.06
6577 9878 4.704833 AGCGAACCGGCACAGCAT 62.705 61.111 0.00 0.00 34.64 3.79
6616 9917 4.442733 GTGGACTAGTAGCTACTACGTACG 59.557 50.000 26.36 19.05 41.37 3.67
6620 9958 7.825681 TCTATAGTGGACTAGTAGCTACTACG 58.174 42.308 26.36 22.63 41.37 3.51
6621 9959 9.807649 GATCTATAGTGGACTAGTAGCTACTAC 57.192 40.741 26.36 19.64 37.73 2.73
6622 9960 8.685427 CGATCTATAGTGGACTAGTAGCTACTA 58.315 40.741 27.73 27.73 37.73 1.82
6623 9961 7.549839 CGATCTATAGTGGACTAGTAGCTACT 58.450 42.308 28.50 28.50 40.24 2.57
6624 9962 6.256321 GCGATCTATAGTGGACTAGTAGCTAC 59.744 46.154 16.43 16.43 0.00 3.58
6625 9963 6.070938 TGCGATCTATAGTGGACTAGTAGCTA 60.071 42.308 0.00 0.00 0.00 3.32
6626 9964 5.180271 GCGATCTATAGTGGACTAGTAGCT 58.820 45.833 0.00 0.00 0.00 3.32
6627 9965 4.936411 TGCGATCTATAGTGGACTAGTAGC 59.064 45.833 0.00 0.00 0.00 3.58
6680 10022 3.920093 CTGACCCCCGCCCAAAGTC 62.920 68.421 0.00 0.00 0.00 3.01
6704 10046 2.072298 GGTCAGTCACAGCATCTTGAC 58.928 52.381 0.00 0.00 42.17 3.18
6705 10047 1.337167 CGGTCAGTCACAGCATCTTGA 60.337 52.381 0.00 0.00 0.00 3.02
6706 10048 1.073964 CGGTCAGTCACAGCATCTTG 58.926 55.000 0.00 0.00 0.00 3.02
6707 10049 0.036952 CCGGTCAGTCACAGCATCTT 60.037 55.000 0.00 0.00 0.00 2.40
6708 10050 1.593787 CCGGTCAGTCACAGCATCT 59.406 57.895 0.00 0.00 0.00 2.90
6709 10051 1.448540 CCCGGTCAGTCACAGCATC 60.449 63.158 0.00 0.00 0.00 3.91
6710 10052 2.665000 CCCGGTCAGTCACAGCAT 59.335 61.111 0.00 0.00 0.00 3.79
6756 10098 0.379669 GCAGTCACATAGCACCATGC 59.620 55.000 0.00 0.00 45.46 4.06
6757 10099 0.654160 CGCAGTCACATAGCACCATG 59.346 55.000 0.00 0.00 0.00 3.66
6766 10108 1.536922 CGGAATCTAGCGCAGTCACAT 60.537 52.381 11.47 0.00 0.00 3.21
6801 10143 0.949105 GGACAACGCACCGTGAAGAT 60.949 55.000 1.65 0.00 39.99 2.40
6836 10181 2.664185 CTGGCATCGCATCCCTCG 60.664 66.667 0.00 0.00 0.00 4.63
6840 10185 2.182842 GGTGACTGGCATCGCATCC 61.183 63.158 10.93 0.00 0.00 3.51
6845 10190 1.204704 TCAGTTAGGTGACTGGCATCG 59.795 52.381 5.31 0.00 45.54 3.84
6863 10208 0.249953 TTGCGTTCTTAACCGGCTCA 60.250 50.000 0.00 0.00 0.00 4.26
6864 10209 1.084289 ATTGCGTTCTTAACCGGCTC 58.916 50.000 0.00 0.00 0.00 4.70
6885 10230 3.228749 CAAAGTTACATCAGTTGCGCAG 58.771 45.455 11.31 0.00 0.00 5.18
6886 10231 2.604373 GCAAAGTTACATCAGTTGCGCA 60.604 45.455 5.66 5.66 35.69 6.09
6887 10232 1.978782 GCAAAGTTACATCAGTTGCGC 59.021 47.619 0.00 0.00 35.69 6.09
6898 10246 3.974871 TCCTTTTGGTCGCAAAGTTAC 57.025 42.857 0.00 0.00 41.38 2.50
6936 10284 5.183904 TCCTCTCCAAAGAAATTAAAGCTGC 59.816 40.000 0.00 0.00 0.00 5.25
6953 10301 2.205911 GCTCGCTTTACAATCCTCTCC 58.794 52.381 0.00 0.00 0.00 3.71
6969 10317 0.229753 CGGCTTTATTACTGCGCTCG 59.770 55.000 9.73 1.70 0.00 5.03
6979 10327 3.554129 GCAGGAAAAACACCGGCTTTATT 60.554 43.478 0.00 0.00 43.24 1.40
6980 10328 2.029380 GCAGGAAAAACACCGGCTTTAT 60.029 45.455 0.00 0.00 43.24 1.40
6981 10329 1.338655 GCAGGAAAAACACCGGCTTTA 59.661 47.619 0.00 0.00 43.24 1.85
6982 10330 0.104120 GCAGGAAAAACACCGGCTTT 59.896 50.000 0.00 0.00 43.24 3.51
6996 10344 5.508994 GCATCATCATTGATTCATTGCAGGA 60.509 40.000 0.00 2.78 40.70 3.86
7000 10348 5.333339 GCAAGCATCATCATTGATTCATTGC 60.333 40.000 12.30 12.30 40.70 3.56
7007 10355 5.109210 CACAAAGCAAGCATCATCATTGAT 58.891 37.500 0.00 0.00 43.51 2.57
7008 10356 4.490743 CACAAAGCAAGCATCATCATTGA 58.509 39.130 0.00 0.00 36.00 2.57
7009 10357 3.616821 CCACAAAGCAAGCATCATCATTG 59.383 43.478 0.00 0.00 0.00 2.82
7011 10359 2.829720 ACCACAAAGCAAGCATCATCAT 59.170 40.909 0.00 0.00 0.00 2.45
7013 10361 2.229543 TCACCACAAAGCAAGCATCATC 59.770 45.455 0.00 0.00 0.00 2.92
7014 10362 2.241160 TCACCACAAAGCAAGCATCAT 58.759 42.857 0.00 0.00 0.00 2.45
7023 10371 2.744202 CCACTGTCTATCACCACAAAGC 59.256 50.000 0.00 0.00 0.00 3.51
7055 10403 3.680156 GCATCTTTTGCCCCGTCA 58.320 55.556 0.00 0.00 46.15 4.35
7073 10421 5.880164 TTGTTTGATGGATCCGGTCTATA 57.120 39.130 7.39 0.00 0.00 1.31
7074 10422 4.771114 TTGTTTGATGGATCCGGTCTAT 57.229 40.909 7.39 1.63 0.00 1.98
7101 10449 0.599204 TGACGAAGAACCGGTTGAGC 60.599 55.000 27.87 10.86 0.00 4.26
7102 10450 1.419374 CTGACGAAGAACCGGTTGAG 58.581 55.000 27.87 14.88 0.00 3.02
7103 10451 0.032952 CCTGACGAAGAACCGGTTGA 59.967 55.000 27.87 0.00 0.00 3.18
7104 10452 0.949105 CCCTGACGAAGAACCGGTTG 60.949 60.000 27.87 13.08 0.00 3.77
7212 10566 9.657419 AATATGAAAAAGGTTGAATGAATGGAC 57.343 29.630 0.00 0.00 0.00 4.02
7213 10567 9.874205 GAATATGAAAAAGGTTGAATGAATGGA 57.126 29.630 0.00 0.00 0.00 3.41
7214 10568 9.656040 TGAATATGAAAAAGGTTGAATGAATGG 57.344 29.630 0.00 0.00 0.00 3.16
7216 10570 9.657419 GGTGAATATGAAAAAGGTTGAATGAAT 57.343 29.630 0.00 0.00 0.00 2.57
7217 10571 8.646004 TGGTGAATATGAAAAAGGTTGAATGAA 58.354 29.630 0.00 0.00 0.00 2.57
7218 10572 8.087750 GTGGTGAATATGAAAAAGGTTGAATGA 58.912 33.333 0.00 0.00 0.00 2.57
7219 10573 8.090214 AGTGGTGAATATGAAAAAGGTTGAATG 58.910 33.333 0.00 0.00 0.00 2.67
7220 10574 8.193953 AGTGGTGAATATGAAAAAGGTTGAAT 57.806 30.769 0.00 0.00 0.00 2.57
7222 10576 7.432869 CAAGTGGTGAATATGAAAAAGGTTGA 58.567 34.615 0.00 0.00 0.00 3.18
7223 10577 6.146021 GCAAGTGGTGAATATGAAAAAGGTTG 59.854 38.462 0.00 0.00 0.00 3.77
7225 10579 5.539955 AGCAAGTGGTGAATATGAAAAAGGT 59.460 36.000 0.00 0.00 0.00 3.50
7226 10580 6.029346 AGCAAGTGGTGAATATGAAAAAGG 57.971 37.500 0.00 0.00 0.00 3.11
7266 10620 8.856103 GGTTGGTTTATGGTGCAACTATATAAT 58.144 33.333 2.04 0.00 40.12 1.28
7267 10621 8.056400 AGGTTGGTTTATGGTGCAACTATATAA 58.944 33.333 2.04 0.00 40.12 0.98
7273 10627 2.627699 CAGGTTGGTTTATGGTGCAACT 59.372 45.455 2.04 0.00 36.74 3.16
7291 10645 0.249073 GACGGACGTGGATGATCAGG 60.249 60.000 0.53 0.00 0.00 3.86
7298 10652 1.725557 CGAGATGGACGGACGTGGAT 61.726 60.000 0.53 0.00 0.00 3.41
7301 10655 0.523546 CTTCGAGATGGACGGACGTG 60.524 60.000 0.53 0.00 0.00 4.49
7311 10665 2.347697 TCAACGGTGTCTTCGAGATG 57.652 50.000 0.00 0.00 0.00 2.90
7312 10666 3.594603 AATCAACGGTGTCTTCGAGAT 57.405 42.857 0.00 0.00 0.00 2.75
7317 10671 3.684788 ACAGCATAATCAACGGTGTCTTC 59.315 43.478 0.00 0.00 36.72 2.87
7318 10672 3.674997 ACAGCATAATCAACGGTGTCTT 58.325 40.909 0.00 0.00 36.72 3.01
7319 10673 3.334583 ACAGCATAATCAACGGTGTCT 57.665 42.857 0.00 0.00 36.72 3.41
7320 10674 4.419522 AAACAGCATAATCAACGGTGTC 57.580 40.909 0.00 0.00 40.26 3.67
7321 10675 4.545610 CAAAACAGCATAATCAACGGTGT 58.454 39.130 0.00 0.00 42.77 4.16
7322 10676 3.364621 GCAAAACAGCATAATCAACGGTG 59.635 43.478 0.00 0.00 0.00 4.94
7323 10677 3.255642 AGCAAAACAGCATAATCAACGGT 59.744 39.130 0.00 0.00 36.85 4.83
7324 10678 3.609373 CAGCAAAACAGCATAATCAACGG 59.391 43.478 0.00 0.00 36.85 4.44
7325 10679 3.059834 GCAGCAAAACAGCATAATCAACG 59.940 43.478 0.00 0.00 36.85 4.10
7326 10680 4.240096 AGCAGCAAAACAGCATAATCAAC 58.760 39.130 0.00 0.00 36.85 3.18
7327 10681 4.487948 GAGCAGCAAAACAGCATAATCAA 58.512 39.130 0.00 0.00 36.85 2.57
7328 10682 3.426560 CGAGCAGCAAAACAGCATAATCA 60.427 43.478 0.00 0.00 36.85 2.57
7329 10683 3.103738 CGAGCAGCAAAACAGCATAATC 58.896 45.455 0.00 0.00 36.85 1.75
7330 10684 3.141002 CGAGCAGCAAAACAGCATAAT 57.859 42.857 0.00 0.00 36.85 1.28
7331 10685 2.617250 CGAGCAGCAAAACAGCATAA 57.383 45.000 0.00 0.00 36.85 1.90
7347 10701 0.249073 ACGTGGCATAAGCTAGCGAG 60.249 55.000 9.55 1.70 41.70 5.03
7348 10702 1.026584 TACGTGGCATAAGCTAGCGA 58.973 50.000 9.55 1.39 41.70 4.93
7349 10703 1.787155 CTTACGTGGCATAAGCTAGCG 59.213 52.381 9.55 0.00 41.70 4.26
7355 10709 4.403453 GTTTTCTGCTTACGTGGCATAAG 58.597 43.478 16.15 4.77 39.07 1.73
7356 10710 3.120477 CGTTTTCTGCTTACGTGGCATAA 60.120 43.478 16.15 13.07 39.07 1.90
7357 10711 2.413796 CGTTTTCTGCTTACGTGGCATA 59.586 45.455 16.15 8.46 39.07 3.14
7358 10712 1.196808 CGTTTTCTGCTTACGTGGCAT 59.803 47.619 16.15 0.00 39.07 4.40
7359 10713 0.584396 CGTTTTCTGCTTACGTGGCA 59.416 50.000 15.25 15.25 38.10 4.92
7360 10714 0.110373 CCGTTTTCTGCTTACGTGGC 60.110 55.000 0.00 3.00 33.68 5.01
7361 10715 0.515564 CCCGTTTTCTGCTTACGTGG 59.484 55.000 0.00 0.00 33.68 4.94
7362 10716 1.193874 GTCCCGTTTTCTGCTTACGTG 59.806 52.381 0.00 0.00 33.68 4.49
7363 10717 1.505425 GTCCCGTTTTCTGCTTACGT 58.495 50.000 0.00 0.00 33.68 3.57
7364 10718 0.794473 GGTCCCGTTTTCTGCTTACG 59.206 55.000 0.00 0.00 35.20 3.18
7365 10719 1.162698 GGGTCCCGTTTTCTGCTTAC 58.837 55.000 0.00 0.00 0.00 2.34
7366 10720 0.766131 TGGGTCCCGTTTTCTGCTTA 59.234 50.000 2.65 0.00 0.00 3.09
7367 10721 0.112412 ATGGGTCCCGTTTTCTGCTT 59.888 50.000 2.65 0.00 0.00 3.91
7368 10722 0.322546 GATGGGTCCCGTTTTCTGCT 60.323 55.000 3.45 0.00 0.00 4.24
7369 10723 0.322546 AGATGGGTCCCGTTTTCTGC 60.323 55.000 3.45 0.00 0.00 4.26
7370 10724 1.271379 ACAGATGGGTCCCGTTTTCTG 60.271 52.381 20.33 20.33 37.27 3.02
7371 10725 1.003233 GACAGATGGGTCCCGTTTTCT 59.997 52.381 3.45 0.34 0.00 2.52
7372 10726 1.450025 GACAGATGGGTCCCGTTTTC 58.550 55.000 3.45 0.00 0.00 2.29
7373 10727 0.321298 CGACAGATGGGTCCCGTTTT 60.321 55.000 3.45 0.00 34.24 2.43
7374 10728 1.295423 CGACAGATGGGTCCCGTTT 59.705 57.895 3.45 0.00 34.24 3.60
7375 10729 0.612732 TACGACAGATGGGTCCCGTT 60.613 55.000 3.45 0.00 34.24 4.44
7376 10730 0.612732 TTACGACAGATGGGTCCCGT 60.613 55.000 0.76 0.76 34.24 5.28
7377 10731 0.533491 TTTACGACAGATGGGTCCCG 59.467 55.000 2.65 0.00 34.24 5.14
7378 10732 1.276989 TGTTTACGACAGATGGGTCCC 59.723 52.381 0.00 0.00 34.24 4.46
7379 10733 2.344025 GTGTTTACGACAGATGGGTCC 58.656 52.381 0.00 0.00 39.39 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.