Multiple sequence alignment - TraesCS2A01G406500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G406500 chr2A 100.000 4262 0 0 1 4262 662314895 662319156 0.000000e+00 7871.0
1 TraesCS2A01G406500 chr2A 79.479 614 106 17 2606 3206 662232709 662233315 6.590000e-113 418.0
2 TraesCS2A01G406500 chr2A 86.742 264 34 1 473 735 662228714 662228977 4.170000e-75 292.0
3 TraesCS2A01G406500 chr2A 81.744 367 38 15 1052 1393 661940071 661940433 3.250000e-71 279.0
4 TraesCS2A01G406500 chr2A 75.702 605 105 24 2625 3213 661945234 661945812 9.090000e-67 265.0
5 TraesCS2A01G406500 chr2A 81.562 320 34 14 1091 1385 662229395 662229714 1.530000e-59 241.0
6 TraesCS2A01G406500 chr2A 76.398 483 92 20 1868 2331 662232159 662232638 1.530000e-59 241.0
7 TraesCS2A01G406500 chr2A 89.831 177 15 3 795 969 662229073 662229248 1.540000e-54 224.0
8 TraesCS2A01G406500 chr2A 75.847 443 84 15 1868 2300 661944765 661945194 2.010000e-48 204.0
9 TraesCS2A01G406500 chr2A 87.425 167 11 3 2397 2553 715471562 715471728 2.620000e-42 183.0
10 TraesCS2A01G406500 chr2A 86.826 167 10 4 2397 2551 702944285 702944119 4.380000e-40 176.0
11 TraesCS2A01G406500 chr2A 90.741 54 4 1 990 1042 662229249 662229302 2.130000e-08 71.3
12 TraesCS2A01G406500 chr2B 90.772 1127 81 8 2581 3704 610277797 610278903 0.000000e+00 1483.0
13 TraesCS2A01G406500 chr2B 89.524 1050 55 27 352 1376 610274774 610275793 0.000000e+00 1279.0
14 TraesCS2A01G406500 chr2B 91.699 518 37 4 1834 2347 610277219 610277734 0.000000e+00 713.0
15 TraesCS2A01G406500 chr2B 89.352 216 23 0 1178 1393 610017283 610017498 5.430000e-69 272.0
16 TraesCS2A01G406500 chr2B 84.815 270 38 3 473 741 610111181 610111448 7.020000e-68 268.0
17 TraesCS2A01G406500 chr2B 75.788 603 102 21 2625 3213 610021253 610021825 9.090000e-67 265.0
18 TraesCS2A01G406500 chr2B 82.445 319 31 12 1091 1385 610111872 610112189 5.470000e-64 255.0
19 TraesCS2A01G406500 chr2B 89.175 194 16 5 778 969 610111534 610111724 1.980000e-58 237.0
20 TraesCS2A01G406500 chr2B 75.839 447 86 17 1862 2300 610020781 610021213 1.550000e-49 207.0
21 TraesCS2A01G406500 chr2B 74.580 476 90 22 1868 2331 610115425 610115881 3.390000e-41 180.0
22 TraesCS2A01G406500 chr2B 97.619 42 1 0 3770 3811 610279427 610279468 5.910000e-09 73.1
23 TraesCS2A01G406500 chr2B 89.474 57 5 1 987 1042 610111723 610111779 2.130000e-08 71.3
24 TraesCS2A01G406500 chr2B 97.436 39 1 0 3554 3592 43056999 43056961 2.750000e-07 67.6
25 TraesCS2A01G406500 chr2D 90.838 1026 72 9 2581 3592 518184426 518185443 0.000000e+00 1354.0
26 TraesCS2A01G406500 chr2D 90.597 670 43 10 1730 2392 518183726 518184382 0.000000e+00 870.0
27 TraesCS2A01G406500 chr2D 90.274 658 20 15 768 1406 518181795 518182427 0.000000e+00 821.0
28 TraesCS2A01G406500 chr2D 93.655 394 17 2 352 737 518181134 518181527 2.210000e-162 582.0
29 TraesCS2A01G406500 chr2D 79.903 617 98 19 2606 3206 518169318 518169924 3.040000e-116 429.0
30 TraesCS2A01G406500 chr2D 84.828 290 30 8 473 749 518165415 518165703 3.250000e-71 279.0
31 TraesCS2A01G406500 chr2D 80.965 373 37 15 1052 1393 518070306 518070675 9.090000e-67 265.0
32 TraesCS2A01G406500 chr2D 81.739 345 35 14 1066 1385 518166076 518166417 3.270000e-66 263.0
33 TraesCS2A01G406500 chr2D 75.243 618 114 21 2610 3213 518074412 518075004 1.520000e-64 257.0
34 TraesCS2A01G406500 chr2D 75.914 465 91 17 1871 2329 518073968 518074417 7.180000e-53 219.0
35 TraesCS2A01G406500 chr2D 75.789 475 86 20 1868 2331 518168791 518169247 3.340000e-51 213.0
36 TraesCS2A01G406500 chr2D 86.598 194 21 5 778 969 518165756 518165946 4.320000e-50 209.0
37 TraesCS2A01G406500 chr2D 90.164 61 6 0 293 353 489597723 489597663 3.530000e-11 80.5
38 TraesCS2A01G406500 chr5A 93.926 461 21 2 3809 4262 211620540 211620080 0.000000e+00 689.0
39 TraesCS2A01G406500 chr5A 92.994 471 25 3 3800 4262 75364414 75363944 0.000000e+00 680.0
40 TraesCS2A01G406500 chr5A 93.059 461 25 4 3809 4262 709217457 709217917 0.000000e+00 667.0
41 TraesCS2A01G406500 chr5A 87.293 181 14 4 2385 2556 382961771 382961951 9.350000e-47 198.0
42 TraesCS2A01G406500 chr5A 87.135 171 11 4 2398 2557 64373452 64373282 2.620000e-42 183.0
43 TraesCS2A01G406500 chr1A 93.492 461 23 2 3809 4262 570046198 570045738 0.000000e+00 678.0
44 TraesCS2A01G406500 chr1A 88.415 164 7 4 2399 2550 542369944 542369781 2.020000e-43 187.0
45 TraesCS2A01G406500 chr3A 93.319 464 22 4 3807 4262 551718429 551717967 0.000000e+00 676.0
46 TraesCS2A01G406500 chr3A 93.118 465 24 3 3805 4262 666225336 666225799 0.000000e+00 675.0
47 TraesCS2A01G406500 chr3A 93.275 461 24 2 3809 4262 713896060 713896520 0.000000e+00 673.0
48 TraesCS2A01G406500 chr3A 93.059 461 25 2 3809 4262 698712291 698712751 0.000000e+00 667.0
49 TraesCS2A01G406500 chr7A 92.553 470 25 5 3801 4262 178023890 178023423 0.000000e+00 665.0
50 TraesCS2A01G406500 chr7A 88.957 163 12 2 2397 2553 26451617 26451455 3.360000e-46 196.0
51 TraesCS2A01G406500 chr7A 84.884 86 12 1 274 358 105133124 105133209 7.590000e-13 86.1
52 TraesCS2A01G406500 chr7D 91.845 233 16 3 7 238 148145401 148145171 5.320000e-84 322.0
53 TraesCS2A01G406500 chr7D 90.795 239 19 3 1 238 536314759 536314995 2.470000e-82 316.0
54 TraesCS2A01G406500 chr7D 86.826 167 12 4 2397 2553 576654267 576654101 1.220000e-40 178.0
55 TraesCS2A01G406500 chr6D 91.213 239 18 3 1 238 454120737 454120973 5.320000e-84 322.0
56 TraesCS2A01G406500 chr4A 90.795 239 19 3 1 238 48029709 48029945 2.470000e-82 316.0
57 TraesCS2A01G406500 chr4A 87.500 168 10 5 2397 2553 46078065 46078232 2.620000e-42 183.0
58 TraesCS2A01G406500 chr1B 90.795 239 19 3 1 238 518538500 518538736 2.470000e-82 316.0
59 TraesCS2A01G406500 chr7B 90.377 239 20 3 1 238 405062940 405063176 1.150000e-80 311.0
60 TraesCS2A01G406500 chr6B 90.987 233 18 3 7 238 460488703 460488473 1.150000e-80 311.0
61 TraesCS2A01G406500 chr3D 90.987 233 18 3 7 238 65174283 65174053 1.150000e-80 311.0
62 TraesCS2A01G406500 chr3D 95.349 43 2 0 3553 3595 604893051 604893009 7.650000e-08 69.4
63 TraesCS2A01G406500 chr1D 90.377 239 20 3 1 238 411904961 411905197 1.150000e-80 311.0
64 TraesCS2A01G406500 chr1D 88.304 171 9 3 2397 2556 42271591 42271761 1.210000e-45 195.0
65 TraesCS2A01G406500 chr6A 86.905 168 11 2 2397 2553 64662253 64662420 1.220000e-40 178.0
66 TraesCS2A01G406500 chr3B 88.525 61 7 0 295 355 100975426 100975366 1.640000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G406500 chr2A 662314895 662319156 4261 False 7871.000000 7871 100.000000 1 4262 1 chr2A.!!$F2 4261
1 TraesCS2A01G406500 chr2A 662228714 662233315 4601 False 247.883333 418 84.125500 473 3206 6 chr2A.!!$F5 2733
2 TraesCS2A01G406500 chr2A 661944765 661945812 1047 False 234.500000 265 75.774500 1868 3213 2 chr2A.!!$F4 1345
3 TraesCS2A01G406500 chr2B 610274774 610279468 4694 False 887.025000 1483 92.403500 352 3811 4 chr2B.!!$F3 3459
4 TraesCS2A01G406500 chr2B 610017283 610021825 4542 False 248.000000 272 80.326333 1178 3213 3 chr2B.!!$F1 2035
5 TraesCS2A01G406500 chr2B 610111181 610115881 4700 False 202.260000 268 84.097800 473 2331 5 chr2B.!!$F2 1858
6 TraesCS2A01G406500 chr2D 518181134 518185443 4309 False 906.750000 1354 91.341000 352 3592 4 chr2D.!!$F3 3240
7 TraesCS2A01G406500 chr2D 518165415 518169924 4509 False 278.600000 429 81.771400 473 3206 5 chr2D.!!$F2 2733
8 TraesCS2A01G406500 chr2D 518070306 518075004 4698 False 247.000000 265 77.374000 1052 3213 3 chr2D.!!$F1 2161

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
394 398 0.108138 GAATGCAGGCACGTACCTCT 60.108 55.0 3.69 0.0 38.26 3.69 F
895 1225 0.537188 TGACTGAGGCGAAGGATTCC 59.463 55.0 0.00 0.0 43.81 3.01 F
1748 8430 0.039256 GCATCAAACGGTGCACACAT 60.039 50.0 20.43 0.0 40.94 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1419 2158 0.107831 CCCCACCAAAGAACACGAGA 59.892 55.0 0.00 0.0 0.00 4.04 R
2571 10535 0.037975 TTACGAGGTTCCCACGAAGC 60.038 55.0 7.10 0.0 45.09 3.86 R
3715 11708 0.325860 AGTGGGCCCCGACAGTTATA 60.326 55.0 22.27 0.0 0.00 0.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.458573 TCTTTTCAATGCACTTTAAAGTAGGA 57.541 30.769 20.15 15.36 37.08 2.94
26 27 8.908903 TCTTTTCAATGCACTTTAAAGTAGGAA 58.091 29.630 20.15 15.02 37.08 3.36
27 28 9.528018 CTTTTCAATGCACTTTAAAGTAGGAAA 57.472 29.630 20.15 18.88 37.08 3.13
28 29 9.877178 TTTTCAATGCACTTTAAAGTAGGAAAA 57.123 25.926 20.15 22.26 37.08 2.29
29 30 9.877178 TTTCAATGCACTTTAAAGTAGGAAAAA 57.123 25.926 20.15 13.09 37.08 1.94
44 45 8.887264 AGTAGGAAAAATACTTCTCTCTCTCA 57.113 34.615 0.00 0.00 29.01 3.27
45 46 9.487442 AGTAGGAAAAATACTTCTCTCTCTCAT 57.513 33.333 0.00 0.00 29.01 2.90
49 50 9.877178 GGAAAAATACTTCTCTCTCTCATTACA 57.123 33.333 0.00 0.00 0.00 2.41
51 52 8.918961 AAAATACTTCTCTCTCTCATTACACG 57.081 34.615 0.00 0.00 0.00 4.49
52 53 4.974368 ACTTCTCTCTCTCATTACACGG 57.026 45.455 0.00 0.00 0.00 4.94
53 54 4.337145 ACTTCTCTCTCTCATTACACGGT 58.663 43.478 0.00 0.00 0.00 4.83
54 55 5.498393 ACTTCTCTCTCTCATTACACGGTA 58.502 41.667 0.00 0.00 0.00 4.02
55 56 5.944599 ACTTCTCTCTCTCATTACACGGTAA 59.055 40.000 0.00 0.00 0.00 2.85
56 57 6.603997 ACTTCTCTCTCTCATTACACGGTAAT 59.396 38.462 4.14 4.14 0.00 1.89
57 58 7.122948 ACTTCTCTCTCTCATTACACGGTAATT 59.877 37.037 6.57 0.00 0.00 1.40
58 59 8.515695 TTCTCTCTCTCATTACACGGTAATTA 57.484 34.615 6.57 0.53 0.00 1.40
59 60 8.515695 TCTCTCTCTCATTACACGGTAATTAA 57.484 34.615 6.57 0.00 0.00 1.40
60 61 8.622157 TCTCTCTCTCATTACACGGTAATTAAG 58.378 37.037 6.57 7.57 0.00 1.85
61 62 8.515695 TCTCTCTCATTACACGGTAATTAAGA 57.484 34.615 6.57 10.28 0.00 2.10
62 63 8.404000 TCTCTCTCATTACACGGTAATTAAGAC 58.596 37.037 6.57 0.00 0.00 3.01
63 64 7.486647 TCTCTCATTACACGGTAATTAAGACC 58.513 38.462 6.57 0.08 0.00 3.85
64 65 7.123098 TCTCTCATTACACGGTAATTAAGACCA 59.877 37.037 9.40 0.00 36.72 4.02
65 66 7.613585 TCTCATTACACGGTAATTAAGACCAA 58.386 34.615 9.40 0.00 36.72 3.67
66 67 8.262227 TCTCATTACACGGTAATTAAGACCAAT 58.738 33.333 9.40 0.44 36.72 3.16
67 68 9.537192 CTCATTACACGGTAATTAAGACCAATA 57.463 33.333 9.40 0.00 36.72 1.90
68 69 9.887629 TCATTACACGGTAATTAAGACCAATAA 57.112 29.630 9.40 5.33 36.72 1.40
69 70 9.925268 CATTACACGGTAATTAAGACCAATAAC 57.075 33.333 9.40 0.00 36.72 1.89
70 71 9.669887 ATTACACGGTAATTAAGACCAATAACA 57.330 29.630 9.40 0.00 36.72 2.41
71 72 7.982761 ACACGGTAATTAAGACCAATAACAA 57.017 32.000 9.40 0.00 36.72 2.83
72 73 8.570068 ACACGGTAATTAAGACCAATAACAAT 57.430 30.769 9.40 0.00 36.72 2.71
73 74 8.671028 ACACGGTAATTAAGACCAATAACAATC 58.329 33.333 9.40 0.00 36.72 2.67
74 75 8.889717 CACGGTAATTAAGACCAATAACAATCT 58.110 33.333 9.40 0.00 36.72 2.40
82 83 7.630242 AAGACCAATAACAATCTACACATGG 57.370 36.000 0.00 0.00 0.00 3.66
83 84 6.721318 AGACCAATAACAATCTACACATGGT 58.279 36.000 0.00 0.00 41.10 3.55
84 85 7.016361 GACCAATAACAATCTACACATGGTC 57.984 40.000 5.47 5.47 45.04 4.02
85 86 6.721318 ACCAATAACAATCTACACATGGTCT 58.279 36.000 0.00 0.00 33.59 3.85
86 87 7.175104 ACCAATAACAATCTACACATGGTCTT 58.825 34.615 0.00 0.00 33.59 3.01
87 88 7.336931 ACCAATAACAATCTACACATGGTCTTC 59.663 37.037 0.00 0.00 33.59 2.87
88 89 7.554118 CCAATAACAATCTACACATGGTCTTCT 59.446 37.037 0.00 0.00 0.00 2.85
89 90 8.950210 CAATAACAATCTACACATGGTCTTCTT 58.050 33.333 0.00 0.00 0.00 2.52
93 94 9.520515 AACAATCTACACATGGTCTTCTTAATT 57.479 29.630 0.00 0.00 0.00 1.40
94 95 9.520515 ACAATCTACACATGGTCTTCTTAATTT 57.479 29.630 0.00 0.00 0.00 1.82
101 102 9.912634 ACACATGGTCTTCTTAATTTTTACATG 57.087 29.630 0.00 0.00 38.27 3.21
102 103 8.863049 CACATGGTCTTCTTAATTTTTACATGC 58.137 33.333 0.00 0.00 36.40 4.06
103 104 8.584157 ACATGGTCTTCTTAATTTTTACATGCA 58.416 29.630 0.00 0.00 36.40 3.96
104 105 8.863049 CATGGTCTTCTTAATTTTTACATGCAC 58.137 33.333 0.00 0.00 0.00 4.57
105 106 8.177119 TGGTCTTCTTAATTTTTACATGCACT 57.823 30.769 0.00 0.00 0.00 4.40
106 107 8.637986 TGGTCTTCTTAATTTTTACATGCACTT 58.362 29.630 0.00 0.00 0.00 3.16
119 120 9.906660 TTTTACATGCACTTAACTTATTTGAGG 57.093 29.630 0.00 0.00 0.00 3.86
120 121 6.515272 ACATGCACTTAACTTATTTGAGGG 57.485 37.500 0.00 0.00 0.00 4.30
121 122 6.010219 ACATGCACTTAACTTATTTGAGGGT 58.990 36.000 0.00 0.00 0.00 4.34
122 123 5.957842 TGCACTTAACTTATTTGAGGGTG 57.042 39.130 0.00 0.00 0.00 4.61
123 124 4.764823 TGCACTTAACTTATTTGAGGGTGG 59.235 41.667 0.00 0.00 0.00 4.61
124 125 4.157840 GCACTTAACTTATTTGAGGGTGGG 59.842 45.833 0.00 0.00 0.00 4.61
125 126 5.321927 CACTTAACTTATTTGAGGGTGGGT 58.678 41.667 0.00 0.00 0.00 4.51
126 127 6.478129 CACTTAACTTATTTGAGGGTGGGTA 58.522 40.000 0.00 0.00 0.00 3.69
127 128 6.943718 CACTTAACTTATTTGAGGGTGGGTAA 59.056 38.462 0.00 0.00 0.00 2.85
128 129 7.614192 CACTTAACTTATTTGAGGGTGGGTAAT 59.386 37.037 0.00 0.00 0.00 1.89
129 130 8.174757 ACTTAACTTATTTGAGGGTGGGTAATT 58.825 33.333 0.00 0.00 0.00 1.40
130 131 9.689501 CTTAACTTATTTGAGGGTGGGTAATTA 57.310 33.333 0.00 0.00 0.00 1.40
132 133 8.959676 AACTTATTTGAGGGTGGGTAATTAAA 57.040 30.769 0.00 0.00 0.00 1.52
133 134 8.959676 ACTTATTTGAGGGTGGGTAATTAAAA 57.040 30.769 0.00 0.00 0.00 1.52
134 135 9.382307 ACTTATTTGAGGGTGGGTAATTAAAAA 57.618 29.630 0.00 0.00 0.00 1.94
135 136 9.869757 CTTATTTGAGGGTGGGTAATTAAAAAG 57.130 33.333 0.00 0.00 0.00 2.27
136 137 6.673839 TTTGAGGGTGGGTAATTAAAAAGG 57.326 37.500 0.00 0.00 0.00 3.11
137 138 5.602291 TGAGGGTGGGTAATTAAAAAGGA 57.398 39.130 0.00 0.00 0.00 3.36
138 139 5.576128 TGAGGGTGGGTAATTAAAAAGGAG 58.424 41.667 0.00 0.00 0.00 3.69
139 140 5.313772 TGAGGGTGGGTAATTAAAAAGGAGA 59.686 40.000 0.00 0.00 0.00 3.71
140 141 5.827756 AGGGTGGGTAATTAAAAAGGAGAG 58.172 41.667 0.00 0.00 0.00 3.20
141 142 5.554350 AGGGTGGGTAATTAAAAAGGAGAGA 59.446 40.000 0.00 0.00 0.00 3.10
142 143 5.886474 GGGTGGGTAATTAAAAAGGAGAGAG 59.114 44.000 0.00 0.00 0.00 3.20
143 144 6.296836 GGGTGGGTAATTAAAAAGGAGAGAGA 60.297 42.308 0.00 0.00 0.00 3.10
144 145 7.347252 GGTGGGTAATTAAAAAGGAGAGAGAT 58.653 38.462 0.00 0.00 0.00 2.75
145 146 8.491958 GGTGGGTAATTAAAAAGGAGAGAGATA 58.508 37.037 0.00 0.00 0.00 1.98
146 147 9.549078 GTGGGTAATTAAAAAGGAGAGAGATAG 57.451 37.037 0.00 0.00 0.00 2.08
147 148 9.280456 TGGGTAATTAAAAAGGAGAGAGATAGT 57.720 33.333 0.00 0.00 0.00 2.12
148 149 9.549078 GGGTAATTAAAAAGGAGAGAGATAGTG 57.451 37.037 0.00 0.00 0.00 2.74
149 150 9.549078 GGTAATTAAAAAGGAGAGAGATAGTGG 57.451 37.037 0.00 0.00 0.00 4.00
150 151 9.047371 GTAATTAAAAAGGAGAGAGATAGTGGC 57.953 37.037 0.00 0.00 0.00 5.01
151 152 6.875972 TTAAAAAGGAGAGAGATAGTGGCT 57.124 37.500 0.00 0.00 0.00 4.75
152 153 5.770685 AAAAAGGAGAGAGATAGTGGCTT 57.229 39.130 0.00 0.00 0.00 4.35
153 154 4.751767 AAAGGAGAGAGATAGTGGCTTG 57.248 45.455 0.00 0.00 0.00 4.01
154 155 2.038659 AGGAGAGAGATAGTGGCTTGC 58.961 52.381 0.00 0.00 0.00 4.01
155 156 1.759445 GGAGAGAGATAGTGGCTTGCA 59.241 52.381 0.00 0.00 0.00 4.08
156 157 2.368221 GGAGAGAGATAGTGGCTTGCAT 59.632 50.000 0.00 0.00 0.00 3.96
157 158 3.181456 GGAGAGAGATAGTGGCTTGCATT 60.181 47.826 0.00 0.00 0.00 3.56
158 159 4.450053 GAGAGAGATAGTGGCTTGCATTT 58.550 43.478 0.00 0.00 0.00 2.32
159 160 4.853007 AGAGAGATAGTGGCTTGCATTTT 58.147 39.130 0.00 0.00 0.00 1.82
160 161 5.259632 AGAGAGATAGTGGCTTGCATTTTT 58.740 37.500 0.00 0.00 0.00 1.94
161 162 5.356470 AGAGAGATAGTGGCTTGCATTTTTC 59.644 40.000 0.00 0.00 0.00 2.29
162 163 4.400567 AGAGATAGTGGCTTGCATTTTTCC 59.599 41.667 0.00 0.00 0.00 3.13
163 164 4.088634 AGATAGTGGCTTGCATTTTTCCA 58.911 39.130 0.00 0.00 0.00 3.53
164 165 4.527816 AGATAGTGGCTTGCATTTTTCCAA 59.472 37.500 0.00 0.00 0.00 3.53
165 166 3.775261 AGTGGCTTGCATTTTTCCAAT 57.225 38.095 0.00 0.00 0.00 3.16
166 167 3.404899 AGTGGCTTGCATTTTTCCAATG 58.595 40.909 0.00 0.00 0.00 2.82
223 224 8.779354 AAATTTCTAGATGTACACTCTTCACC 57.221 34.615 0.00 0.00 0.00 4.02
224 225 6.911250 TTTCTAGATGTACACTCTTCACCA 57.089 37.500 0.00 0.00 0.00 4.17
225 226 6.516739 TTCTAGATGTACACTCTTCACCAG 57.483 41.667 0.00 0.00 0.00 4.00
226 227 5.816682 TCTAGATGTACACTCTTCACCAGA 58.183 41.667 0.00 0.04 0.00 3.86
227 228 4.792521 AGATGTACACTCTTCACCAGAC 57.207 45.455 0.00 0.00 0.00 3.51
228 229 3.191581 AGATGTACACTCTTCACCAGACG 59.808 47.826 0.00 0.00 0.00 4.18
229 230 1.611977 TGTACACTCTTCACCAGACGG 59.388 52.381 0.00 0.00 38.77 4.79
230 231 1.884579 GTACACTCTTCACCAGACGGA 59.115 52.381 0.00 0.00 35.59 4.69
231 232 0.962489 ACACTCTTCACCAGACGGAG 59.038 55.000 0.00 0.00 35.59 4.63
244 245 2.277858 ACGGAGTGAGTAAGGCAGG 58.722 57.895 0.00 0.00 42.51 4.85
245 246 0.251653 ACGGAGTGAGTAAGGCAGGA 60.252 55.000 0.00 0.00 42.51 3.86
246 247 1.115467 CGGAGTGAGTAAGGCAGGAT 58.885 55.000 0.00 0.00 0.00 3.24
247 248 1.202463 CGGAGTGAGTAAGGCAGGATG 60.202 57.143 0.00 0.00 40.87 3.51
248 249 1.139853 GGAGTGAGTAAGGCAGGATGG 59.860 57.143 0.00 0.00 35.86 3.51
249 250 1.139853 GAGTGAGTAAGGCAGGATGGG 59.860 57.143 0.00 0.00 35.86 4.00
250 251 0.912486 GTGAGTAAGGCAGGATGGGT 59.088 55.000 0.00 0.00 35.86 4.51
251 252 2.116238 GTGAGTAAGGCAGGATGGGTA 58.884 52.381 0.00 0.00 35.86 3.69
252 253 2.103263 GTGAGTAAGGCAGGATGGGTAG 59.897 54.545 0.00 0.00 35.86 3.18
253 254 1.070914 GAGTAAGGCAGGATGGGTAGC 59.929 57.143 0.00 0.00 35.86 3.58
256 257 3.006677 GGCAGGATGGGTAGCCAA 58.993 61.111 19.29 1.26 46.26 4.52
257 258 1.306296 GGCAGGATGGGTAGCCAAA 59.694 57.895 19.29 0.00 46.26 3.28
258 259 0.324275 GGCAGGATGGGTAGCCAAAA 60.324 55.000 19.29 0.00 46.26 2.44
259 260 1.689258 GGCAGGATGGGTAGCCAAAAT 60.689 52.381 19.29 0.49 46.26 1.82
260 261 2.424234 GGCAGGATGGGTAGCCAAAATA 60.424 50.000 19.29 0.00 46.26 1.40
261 262 2.887152 GCAGGATGGGTAGCCAAAATAG 59.113 50.000 19.29 8.43 33.81 1.73
262 263 3.435026 GCAGGATGGGTAGCCAAAATAGA 60.435 47.826 19.29 0.00 33.81 1.98
263 264 4.792068 CAGGATGGGTAGCCAAAATAGAA 58.208 43.478 19.29 0.00 33.81 2.10
264 265 5.388654 CAGGATGGGTAGCCAAAATAGAAT 58.611 41.667 19.29 0.00 33.81 2.40
265 266 5.242393 CAGGATGGGTAGCCAAAATAGAATG 59.758 44.000 19.29 5.00 33.81 2.67
266 267 4.021981 GGATGGGTAGCCAAAATAGAATGC 60.022 45.833 19.29 0.00 30.94 3.56
267 268 3.974719 TGGGTAGCCAAAATAGAATGCA 58.025 40.909 12.23 0.00 0.00 3.96
268 269 3.699038 TGGGTAGCCAAAATAGAATGCAC 59.301 43.478 12.23 0.00 0.00 4.57
269 270 3.699038 GGGTAGCCAAAATAGAATGCACA 59.301 43.478 5.96 0.00 0.00 4.57
270 271 4.440112 GGGTAGCCAAAATAGAATGCACAC 60.440 45.833 5.96 0.00 0.00 3.82
271 272 4.157656 GGTAGCCAAAATAGAATGCACACA 59.842 41.667 0.00 0.00 0.00 3.72
272 273 4.870123 AGCCAAAATAGAATGCACACAA 57.130 36.364 0.00 0.00 0.00 3.33
273 274 5.410355 AGCCAAAATAGAATGCACACAAT 57.590 34.783 0.00 0.00 0.00 2.71
274 275 5.413499 AGCCAAAATAGAATGCACACAATC 58.587 37.500 0.00 0.00 0.00 2.67
275 276 5.186409 AGCCAAAATAGAATGCACACAATCT 59.814 36.000 0.00 0.00 39.42 2.40
276 277 5.290158 GCCAAAATAGAATGCACACAATCTG 59.710 40.000 0.00 0.00 36.69 2.90
277 278 6.392354 CCAAAATAGAATGCACACAATCTGT 58.608 36.000 0.00 0.00 36.69 3.41
278 279 6.869913 CCAAAATAGAATGCACACAATCTGTT 59.130 34.615 0.00 0.00 38.39 3.16
279 280 7.385752 CCAAAATAGAATGCACACAATCTGTTT 59.614 33.333 0.00 1.46 44.36 2.83
280 281 8.891671 AAAATAGAATGCACACAATCTGTTTT 57.108 26.923 10.80 10.80 45.07 2.43
281 282 8.891671 AAATAGAATGCACACAATCTGTTTTT 57.108 26.923 0.00 0.00 41.59 1.94
299 300 4.735662 TTTTTCGATTGGTCCTTACGTG 57.264 40.909 0.00 0.00 0.00 4.49
300 301 3.663995 TTTCGATTGGTCCTTACGTGA 57.336 42.857 0.00 0.00 0.00 4.35
301 302 2.642139 TCGATTGGTCCTTACGTGAC 57.358 50.000 0.00 0.00 0.00 3.67
302 303 2.165167 TCGATTGGTCCTTACGTGACT 58.835 47.619 0.00 0.00 33.22 3.41
303 304 2.559668 TCGATTGGTCCTTACGTGACTT 59.440 45.455 0.00 0.00 33.22 3.01
304 305 2.666508 CGATTGGTCCTTACGTGACTTG 59.333 50.000 0.00 0.00 33.22 3.16
305 306 3.660865 GATTGGTCCTTACGTGACTTGT 58.339 45.455 0.00 0.00 33.22 3.16
306 307 4.616604 CGATTGGTCCTTACGTGACTTGTA 60.617 45.833 0.00 0.00 33.22 2.41
307 308 4.877378 TTGGTCCTTACGTGACTTGTAT 57.123 40.909 0.00 0.00 33.22 2.29
308 309 4.877378 TGGTCCTTACGTGACTTGTATT 57.123 40.909 0.00 0.00 33.22 1.89
309 310 5.217978 TGGTCCTTACGTGACTTGTATTT 57.782 39.130 0.00 0.00 33.22 1.40
310 311 5.613329 TGGTCCTTACGTGACTTGTATTTT 58.387 37.500 0.00 0.00 33.22 1.82
311 312 5.467399 TGGTCCTTACGTGACTTGTATTTTG 59.533 40.000 0.00 0.00 33.22 2.44
312 313 5.467735 GGTCCTTACGTGACTTGTATTTTGT 59.532 40.000 0.00 0.00 33.22 2.83
313 314 6.017687 GGTCCTTACGTGACTTGTATTTTGTT 60.018 38.462 0.00 0.00 33.22 2.83
314 315 7.412063 GTCCTTACGTGACTTGTATTTTGTTT 58.588 34.615 0.00 0.00 0.00 2.83
315 316 7.911727 GTCCTTACGTGACTTGTATTTTGTTTT 59.088 33.333 0.00 0.00 0.00 2.43
316 317 8.460428 TCCTTACGTGACTTGTATTTTGTTTTT 58.540 29.630 0.00 0.00 0.00 1.94
344 345 7.502177 AATATAAATGAGACGCGTATTACCG 57.498 36.000 13.97 3.99 0.00 4.02
345 346 2.857592 AATGAGACGCGTATTACCGT 57.142 45.000 13.97 9.21 40.85 4.83
346 347 2.115348 ATGAGACGCGTATTACCGTG 57.885 50.000 13.97 6.44 43.62 4.94
347 348 1.085893 TGAGACGCGTATTACCGTGA 58.914 50.000 13.97 0.00 40.64 4.35
348 349 1.468127 TGAGACGCGTATTACCGTGAA 59.532 47.619 13.97 0.00 40.64 3.18
349 350 2.095314 TGAGACGCGTATTACCGTGAAA 60.095 45.455 13.97 0.00 40.64 2.69
350 351 2.916716 GAGACGCGTATTACCGTGAAAA 59.083 45.455 13.97 0.00 40.64 2.29
394 398 0.108138 GAATGCAGGCACGTACCTCT 60.108 55.000 3.69 0.00 38.26 3.69
417 429 3.681417 ACCTTAGAATTTTACACGCGGAC 59.319 43.478 12.47 0.00 0.00 4.79
420 432 2.485903 AGAATTTTACACGCGGACACA 58.514 42.857 12.47 0.00 0.00 3.72
423 435 0.931702 TTTTACACGCGGACACACTG 59.068 50.000 12.47 0.00 0.00 3.66
549 573 3.842923 CAGCTCGCCATCCTCGGT 61.843 66.667 0.00 0.00 0.00 4.69
707 732 6.007677 GCGATTTAAAGTTGTTCACTAGTCG 58.992 40.000 0.00 0.00 32.94 4.18
741 766 5.422214 GCCCTGGCATACAGTATAGTATT 57.578 43.478 2.58 0.00 46.06 1.89
744 769 7.042335 GCCCTGGCATACAGTATAGTATTAAG 58.958 42.308 2.58 0.00 46.06 1.85
745 770 7.093465 GCCCTGGCATACAGTATAGTATTAAGA 60.093 40.741 2.58 0.00 46.06 2.10
746 771 8.812972 CCCTGGCATACAGTATAGTATTAAGAA 58.187 37.037 0.00 0.00 46.06 2.52
747 772 9.640963 CCTGGCATACAGTATAGTATTAAGAAC 57.359 37.037 0.00 0.00 46.06 3.01
874 1204 0.603065 CAGCATATCCCGTCGGATCA 59.397 55.000 14.39 0.00 46.77 2.92
895 1225 0.537188 TGACTGAGGCGAAGGATTCC 59.463 55.000 0.00 0.00 43.81 3.01
942 1272 3.547613 CGCTGCATCTCCTTTTGCTTATC 60.548 47.826 0.00 0.00 39.60 1.75
953 1283 8.201464 TCTCCTTTTGCTTATCATATTCGTGTA 58.799 33.333 0.00 0.00 0.00 2.90
954 1284 8.902540 TCCTTTTGCTTATCATATTCGTGTAT 57.097 30.769 0.00 0.00 0.00 2.29
956 1286 9.599322 CCTTTTGCTTATCATATTCGTGTATTC 57.401 33.333 0.00 0.00 0.00 1.75
961 1291 7.095229 TGCTTATCATATTCGTGTATTCTTGGC 60.095 37.037 0.00 0.00 0.00 4.52
972 1304 2.608970 ATTCTTGGCCCGTCCCATCG 62.609 60.000 0.00 0.00 34.21 3.84
976 1308 3.782443 GGCCCGTCCCATCGTTCT 61.782 66.667 0.00 0.00 0.00 3.01
1046 1405 2.480555 CAATGCCCGCTCGTGTTC 59.519 61.111 0.00 0.00 0.00 3.18
1309 1730 2.687566 GTCGACCACCCCTCCCAT 60.688 66.667 3.51 0.00 0.00 4.00
1395 1987 7.872061 ATTTCTTCCCCCTTCAATTTTAGTT 57.128 32.000 0.00 0.00 0.00 2.24
1406 1998 7.281100 CCCTTCAATTTTAGTTGTAGAGGCTAG 59.719 40.741 0.00 0.00 30.71 3.42
1433 2172 4.458951 CTGAAAGTCTCGTGTTCTTTGG 57.541 45.455 12.22 5.12 32.59 3.28
1434 2173 3.869065 TGAAAGTCTCGTGTTCTTTGGT 58.131 40.909 12.22 0.00 32.59 3.67
1439 2182 1.515521 CTCGTGTTCTTTGGTGGGGC 61.516 60.000 0.00 0.00 0.00 5.80
1444 2187 3.835790 TTCTTTGGTGGGGCGACGG 62.836 63.158 0.00 0.00 0.00 4.79
1451 2194 4.371417 TGGGGCGACGGTCTAGGT 62.371 66.667 6.57 0.00 0.00 3.08
1452 2195 3.834799 GGGGCGACGGTCTAGGTG 61.835 72.222 6.57 0.00 0.00 4.00
1460 2441 0.324460 ACGGTCTAGGTGCTAGGCTT 60.324 55.000 0.00 0.00 38.58 4.35
1483 2943 7.538303 TTCAAAGCCTTTCAATTCACTTTTC 57.462 32.000 0.00 0.00 0.00 2.29
1489 2965 5.225642 CCTTTCAATTCACTTTTCTGAGCC 58.774 41.667 0.00 0.00 0.00 4.70
1513 2989 3.883830 AGTCACTAGAAGCAGACCATG 57.116 47.619 0.00 0.00 0.00 3.66
1526 3002 1.276421 AGACCATGGACGAAAGAGTGG 59.724 52.381 21.47 0.00 0.00 4.00
1553 4008 1.713297 AGAAACCGGACCACACTACT 58.287 50.000 9.46 0.00 0.00 2.57
1569 4024 4.689345 ACACTACTAATGCAAACGGAGAAC 59.311 41.667 0.00 0.00 0.00 3.01
1580 5125 4.388499 GGAGAACGCCTGGCCGAA 62.388 66.667 14.12 0.00 0.00 4.30
1605 5151 5.689383 AAAAATAACGTGTGAGCATGTCT 57.311 34.783 0.00 0.00 43.47 3.41
1617 7974 4.090642 GTGAGCATGTCTAACTCGAACAAG 59.909 45.833 0.00 0.00 32.98 3.16
1646 8061 2.490903 CAAAAGCACTGCTCAAGGCTAT 59.509 45.455 3.40 0.00 38.25 2.97
1670 8352 5.741962 TTTTTCCATGATCCATTGAGCAA 57.258 34.783 0.00 0.00 40.87 3.91
1678 8360 3.876914 TGATCCATTGAGCAATAACGACC 59.123 43.478 0.00 0.00 33.08 4.79
1679 8361 3.627395 TCCATTGAGCAATAACGACCT 57.373 42.857 0.00 0.00 0.00 3.85
1680 8362 3.950397 TCCATTGAGCAATAACGACCTT 58.050 40.909 0.00 0.00 0.00 3.50
1681 8363 4.331968 TCCATTGAGCAATAACGACCTTT 58.668 39.130 0.00 0.00 0.00 3.11
1682 8364 4.764823 TCCATTGAGCAATAACGACCTTTT 59.235 37.500 0.00 0.00 0.00 2.27
1684 8366 5.345741 CCATTGAGCAATAACGACCTTTTTG 59.654 40.000 0.00 0.00 0.00 2.44
1685 8367 4.497473 TGAGCAATAACGACCTTTTTGG 57.503 40.909 0.00 0.00 42.93 3.28
1687 8369 1.982913 GCAATAACGACCTTTTTGGCG 59.017 47.619 0.00 0.00 40.22 5.69
1689 8371 3.231160 CAATAACGACCTTTTTGGCGTC 58.769 45.455 0.00 0.00 43.77 5.19
1690 8372 1.228533 TAACGACCTTTTTGGCGTCC 58.771 50.000 0.00 0.00 43.77 4.79
1691 8373 0.464916 AACGACCTTTTTGGCGTCCT 60.465 50.000 0.00 0.00 43.77 3.85
1693 8375 1.002773 ACGACCTTTTTGGCGTCCTAT 59.997 47.619 0.00 0.00 41.97 2.57
1699 8381 6.599356 ACCTTTTTGGCGTCCTATATTTTT 57.401 33.333 0.00 0.00 40.22 1.94
1700 8382 6.627243 ACCTTTTTGGCGTCCTATATTTTTC 58.373 36.000 0.00 0.00 40.22 2.29
1701 8383 6.040247 CCTTTTTGGCGTCCTATATTTTTCC 58.960 40.000 0.00 0.00 0.00 3.13
1702 8384 5.585820 TTTTGGCGTCCTATATTTTTCCC 57.414 39.130 0.00 0.00 0.00 3.97
1703 8385 2.841215 TGGCGTCCTATATTTTTCCCG 58.159 47.619 0.00 0.00 0.00 5.14
1705 8387 3.118334 TGGCGTCCTATATTTTTCCCGAA 60.118 43.478 0.00 0.00 0.00 4.30
1706 8388 3.878699 GGCGTCCTATATTTTTCCCGAAA 59.121 43.478 0.00 0.00 0.00 3.46
1707 8389 4.336153 GGCGTCCTATATTTTTCCCGAAAA 59.664 41.667 0.00 0.00 41.20 2.29
1709 8391 5.295045 GCGTCCTATATTTTTCCCGAAAAGA 59.705 40.000 3.08 0.00 40.35 2.52
1711 8393 7.407337 CGTCCTATATTTTTCCCGAAAAGAAG 58.593 38.462 3.08 1.23 40.35 2.85
1712 8394 7.466860 CGTCCTATATTTTTCCCGAAAAGAAGG 60.467 40.741 3.08 8.38 40.35 3.46
1713 8395 7.338703 GTCCTATATTTTTCCCGAAAAGAAGGT 59.661 37.037 14.71 3.38 40.35 3.50
1714 8396 7.891712 TCCTATATTTTTCCCGAAAAGAAGGTT 59.108 33.333 14.71 0.00 40.35 3.50
1721 8403 2.224942 CCCGAAAAGAAGGTTTACCCCT 60.225 50.000 0.00 0.00 36.42 4.79
1728 8410 1.281287 GAAGGTTTACCCCTGGTCTCC 59.719 57.143 0.00 0.00 37.09 3.71
1748 8430 0.039256 GCATCAAACGGTGCACACAT 60.039 50.000 20.43 0.00 40.94 3.21
1752 8434 0.597568 CAAACGGTGCACACATCCAT 59.402 50.000 20.43 0.00 0.00 3.41
1753 8435 0.881118 AAACGGTGCACACATCCATC 59.119 50.000 20.43 0.00 0.00 3.51
1758 8440 2.746904 CGGTGCACACATCCATCTTTTA 59.253 45.455 20.43 0.00 0.00 1.52
1923 9863 1.345715 CCCACCCGCTTTCCTATCCT 61.346 60.000 0.00 0.00 0.00 3.24
2041 9985 0.521735 CCGGCCTAGACTTTGTTTGC 59.478 55.000 0.00 0.00 0.00 3.68
2166 10130 2.076100 TCAAGTTGGTCGTCATGATGC 58.924 47.619 10.24 5.53 0.00 3.91
2195 10159 0.042013 GCTCGTACGACCTCATCTCG 60.042 60.000 15.28 2.24 37.17 4.04
2264 10228 4.699522 GACGCCAAGAACCCGCCT 62.700 66.667 0.00 0.00 0.00 5.52
2280 10244 2.277120 CTCCTAACCGCGACGACG 60.277 66.667 8.23 2.12 42.93 5.12
2302 10266 0.392998 GCCTTCCTGAAATGCCTCGA 60.393 55.000 0.00 0.00 0.00 4.04
2357 10321 8.984764 TGACTGCGTGTTTTCCATATATATTAC 58.015 33.333 0.00 0.00 0.00 1.89
2358 10322 8.319143 ACTGCGTGTTTTCCATATATATTACC 57.681 34.615 0.00 0.00 0.00 2.85
2359 10323 7.389607 ACTGCGTGTTTTCCATATATATTACCC 59.610 37.037 0.00 0.00 0.00 3.69
2361 10325 6.094464 GCGTGTTTTCCATATATATTACCCCC 59.906 42.308 0.00 0.00 0.00 5.40
2385 10349 2.009774 CCCCAACTAAATCAGCGACAG 58.990 52.381 0.00 0.00 0.00 3.51
2392 10356 7.399523 CCAACTAAATCAGCGACAGTTAATAC 58.600 38.462 0.00 0.00 0.00 1.89
2393 10357 7.064134 CCAACTAAATCAGCGACAGTTAATACA 59.936 37.037 0.00 0.00 0.00 2.29
2396 10360 8.464404 ACTAAATCAGCGACAGTTAATACAGTA 58.536 33.333 0.00 0.00 0.00 2.74
2397 10361 7.757097 AAATCAGCGACAGTTAATACAGTAG 57.243 36.000 0.00 0.00 0.00 2.57
2400 10364 6.684686 TCAGCGACAGTTAATACAGTAGTTT 58.315 36.000 0.00 0.00 0.00 2.66
2401 10365 7.149973 TCAGCGACAGTTAATACAGTAGTTTT 58.850 34.615 0.00 0.00 0.00 2.43
2403 10367 6.013689 GCGACAGTTAATACAGTAGTTTTGC 58.986 40.000 0.00 0.00 0.00 3.68
2404 10368 6.128634 GCGACAGTTAATACAGTAGTTTTGCT 60.129 38.462 0.00 0.00 0.00 3.91
2405 10369 7.062605 GCGACAGTTAATACAGTAGTTTTGCTA 59.937 37.037 0.00 0.00 0.00 3.49
2409 10373 9.543018 CAGTTAATACAGTAGTTTTGCTAAAGC 57.457 33.333 0.00 0.00 42.50 3.51
2435 10399 7.854422 CACATCTTGATGTGTCATAAGTATTGC 59.146 37.037 26.63 0.00 44.99 3.56
2436 10400 7.553760 ACATCTTGATGTGTCATAAGTATTGCA 59.446 33.333 14.58 0.00 33.56 4.08
2437 10401 7.307493 TCTTGATGTGTCATAAGTATTGCAC 57.693 36.000 0.00 0.00 33.56 4.57
2438 10402 6.878389 TCTTGATGTGTCATAAGTATTGCACA 59.122 34.615 0.00 0.00 40.42 4.57
2439 10403 7.553760 TCTTGATGTGTCATAAGTATTGCACAT 59.446 33.333 13.21 13.21 46.19 3.21
2443 10407 8.962884 ATGTGTCATAAGTATTGCACATCTAA 57.037 30.769 0.00 0.00 41.81 2.10
2444 10408 8.785329 TGTGTCATAAGTATTGCACATCTAAA 57.215 30.769 0.00 0.00 32.79 1.85
2445 10409 9.394767 TGTGTCATAAGTATTGCACATCTAAAT 57.605 29.630 0.00 0.00 32.79 1.40
2446 10410 9.869844 GTGTCATAAGTATTGCACATCTAAATC 57.130 33.333 0.00 0.00 0.00 2.17
2447 10411 9.056005 TGTCATAAGTATTGCACATCTAAATCC 57.944 33.333 0.00 0.00 0.00 3.01
2448 10412 9.277783 GTCATAAGTATTGCACATCTAAATCCT 57.722 33.333 0.00 0.00 0.00 3.24
2476 10440 7.770801 TCATTGATTTTACATCGAGATTCGT 57.229 32.000 0.00 0.00 41.35 3.85
2477 10441 8.865590 TCATTGATTTTACATCGAGATTCGTA 57.134 30.769 0.00 0.00 41.35 3.43
2478 10442 9.476202 TCATTGATTTTACATCGAGATTCGTAT 57.524 29.630 0.00 0.00 41.35 3.06
2479 10443 9.521179 CATTGATTTTACATCGAGATTCGTATG 57.479 33.333 0.00 4.42 41.35 2.39
2480 10444 7.637709 TGATTTTACATCGAGATTCGTATGG 57.362 36.000 0.00 0.69 41.35 2.74
2481 10445 7.430441 TGATTTTACATCGAGATTCGTATGGA 58.570 34.615 0.00 4.73 41.35 3.41
2482 10446 8.088365 TGATTTTACATCGAGATTCGTATGGAT 58.912 33.333 0.00 0.00 41.35 3.41
2483 10447 9.569167 GATTTTACATCGAGATTCGTATGGATA 57.431 33.333 0.00 1.73 41.35 2.59
2485 10449 9.923143 TTTTACATCGAGATTCGTATGGATATT 57.077 29.630 0.00 0.07 41.35 1.28
2486 10450 9.923143 TTTACATCGAGATTCGTATGGATATTT 57.077 29.630 0.00 0.00 41.35 1.40
2487 10451 9.923143 TTACATCGAGATTCGTATGGATATTTT 57.077 29.630 0.00 0.00 41.35 1.82
2488 10452 8.833231 ACATCGAGATTCGTATGGATATTTTT 57.167 30.769 0.00 0.00 41.35 1.94
2512 10476 5.940192 TTTATGCTTGATTCACTCGTTGT 57.060 34.783 0.00 0.00 0.00 3.32
2514 10478 1.264020 TGCTTGATTCACTCGTTGTGC 59.736 47.619 6.47 0.00 45.81 4.57
2515 10479 1.264020 GCTTGATTCACTCGTTGTGCA 59.736 47.619 6.47 0.00 45.81 4.57
2516 10480 2.286950 GCTTGATTCACTCGTTGTGCAA 60.287 45.455 0.00 5.18 45.81 4.08
2517 10481 3.610114 GCTTGATTCACTCGTTGTGCAAT 60.610 43.478 0.00 7.26 45.81 3.56
2518 10482 4.378356 GCTTGATTCACTCGTTGTGCAATA 60.378 41.667 0.00 0.00 45.81 1.90
2519 10483 5.681337 TTGATTCACTCGTTGTGCAATAA 57.319 34.783 0.00 0.00 45.81 1.40
2520 10484 5.029650 TGATTCACTCGTTGTGCAATAAC 57.970 39.130 0.00 0.00 45.81 1.89
2521 10485 4.754618 TGATTCACTCGTTGTGCAATAACT 59.245 37.500 11.83 0.00 45.81 2.24
2522 10486 5.929415 TGATTCACTCGTTGTGCAATAACTA 59.071 36.000 11.83 2.44 45.81 2.24
2523 10487 5.839262 TTCACTCGTTGTGCAATAACTAG 57.161 39.130 12.34 12.34 45.81 2.57
2524 10488 5.128992 TCACTCGTTGTGCAATAACTAGA 57.871 39.130 17.88 7.61 45.81 2.43
2525 10489 5.161358 TCACTCGTTGTGCAATAACTAGAG 58.839 41.667 17.88 15.59 45.81 2.43
2526 10490 3.927142 ACTCGTTGTGCAATAACTAGAGC 59.073 43.478 17.88 0.00 34.95 4.09
2527 10491 3.920446 TCGTTGTGCAATAACTAGAGCA 58.080 40.909 11.83 0.00 35.61 4.26
2549 10513 4.250116 CATCTAGATGTGCCCTAGACAC 57.750 50.000 22.42 8.47 43.57 3.67
2553 10517 4.639726 TGTGCCCTAGACACACCT 57.360 55.556 12.81 0.00 42.88 4.00
2554 10518 2.848608 TGTGCCCTAGACACACCTT 58.151 52.632 12.81 0.00 42.88 3.50
2555 10519 2.018355 TGTGCCCTAGACACACCTTA 57.982 50.000 12.81 0.00 42.88 2.69
2556 10520 2.331166 TGTGCCCTAGACACACCTTAA 58.669 47.619 12.81 0.00 42.88 1.85
2557 10521 2.910319 TGTGCCCTAGACACACCTTAAT 59.090 45.455 12.81 0.00 42.88 1.40
2558 10522 4.098155 TGTGCCCTAGACACACCTTAATA 58.902 43.478 12.81 0.00 42.88 0.98
2559 10523 4.081309 TGTGCCCTAGACACACCTTAATAC 60.081 45.833 12.81 0.00 42.88 1.89
2560 10524 3.131577 TGCCCTAGACACACCTTAATACG 59.868 47.826 0.00 0.00 0.00 3.06
2561 10525 3.492137 GCCCTAGACACACCTTAATACGG 60.492 52.174 0.00 0.00 0.00 4.02
2562 10526 3.703052 CCCTAGACACACCTTAATACGGT 59.297 47.826 0.00 0.00 34.38 4.83
2563 10527 4.161001 CCCTAGACACACCTTAATACGGTT 59.839 45.833 0.00 0.00 30.82 4.44
2564 10528 5.337813 CCCTAGACACACCTTAATACGGTTT 60.338 44.000 0.00 0.00 30.82 3.27
2565 10529 5.579511 CCTAGACACACCTTAATACGGTTTG 59.420 44.000 1.18 1.18 38.02 2.93
2566 10530 5.217978 AGACACACCTTAATACGGTTTGA 57.782 39.130 8.76 0.00 36.10 2.69
2567 10531 5.235516 AGACACACCTTAATACGGTTTGAG 58.764 41.667 8.76 0.00 36.10 3.02
2568 10532 5.011329 AGACACACCTTAATACGGTTTGAGA 59.989 40.000 8.76 0.00 36.10 3.27
2569 10533 5.235516 ACACACCTTAATACGGTTTGAGAG 58.764 41.667 8.76 0.00 36.10 3.20
2570 10534 5.011329 ACACACCTTAATACGGTTTGAGAGA 59.989 40.000 8.76 0.00 36.10 3.10
2571 10535 5.577164 CACACCTTAATACGGTTTGAGAGAG 59.423 44.000 0.00 0.00 34.86 3.20
2572 10536 4.567159 CACCTTAATACGGTTTGAGAGAGC 59.433 45.833 0.00 0.00 30.82 4.09
2573 10537 4.466726 ACCTTAATACGGTTTGAGAGAGCT 59.533 41.667 0.00 0.00 0.00 4.09
2574 10538 5.046520 ACCTTAATACGGTTTGAGAGAGCTT 60.047 40.000 0.00 0.00 0.00 3.74
2575 10539 5.520649 CCTTAATACGGTTTGAGAGAGCTTC 59.479 44.000 0.00 0.00 0.00 3.86
2576 10540 2.631418 TACGGTTTGAGAGAGCTTCG 57.369 50.000 0.00 0.00 0.00 3.79
2577 10541 0.674534 ACGGTTTGAGAGAGCTTCGT 59.325 50.000 0.00 0.00 0.00 3.85
2578 10542 1.063806 CGGTTTGAGAGAGCTTCGTG 58.936 55.000 0.00 0.00 0.00 4.35
2579 10543 1.433534 GGTTTGAGAGAGCTTCGTGG 58.566 55.000 0.00 0.00 0.00 4.94
2718 10682 2.984471 GCTGCAACATGACAATGACTTG 59.016 45.455 0.00 0.00 37.24 3.16
2762 10726 1.901650 GCGAACAACCTCTCCAAGCG 61.902 60.000 0.00 0.00 0.00 4.68
2868 10832 4.452733 GCCGAGGGGGTCTTCACG 62.453 72.222 0.00 0.00 38.44 4.35
2901 10871 0.467844 AAGGCATGTCAGCAACACCA 60.468 50.000 0.00 0.00 41.75 4.17
2907 10888 0.310543 TGTCAGCAACACCATTTCGC 59.689 50.000 0.00 0.00 31.20 4.70
2942 10923 6.311200 ACGTGTCGGGACATTTATTTTAGTAC 59.689 38.462 4.63 0.00 43.97 2.73
2955 10936 7.795431 TTATTTTAGTACTGTGTCGTTACGG 57.205 36.000 5.39 0.00 0.00 4.02
3039 11020 4.134785 TGGGCCTGTGCAACACCA 62.135 61.111 4.53 0.00 45.67 4.17
3219 11201 2.732468 CGCGAGCGATCCATCTGG 60.732 66.667 12.58 0.00 42.83 3.86
3228 11210 3.112205 ATCCATCTGGCCGTGCTCC 62.112 63.158 0.00 0.00 34.44 4.70
3252 11234 2.223203 CGACGGACGACTTGCTACTATT 60.223 50.000 0.00 0.00 45.77 1.73
3327 11309 2.448453 AGGGAGGACTACAAAGACTCG 58.552 52.381 0.00 0.00 33.78 4.18
3456 11442 8.561738 TCTGTAGGATTTGTTTCCACTTTATC 57.438 34.615 0.00 0.00 38.32 1.75
3523 11513 3.675225 CGAATGATTACGATTGGCGAGAT 59.325 43.478 0.00 0.00 44.57 2.75
3529 11519 0.806102 ACGATTGGCGAGATCAACGG 60.806 55.000 12.68 0.38 44.57 4.44
3599 11592 6.652245 CAACGGGACATAAATATACCGAAAC 58.348 40.000 7.99 0.00 43.69 2.78
3610 11603 5.938438 ATATACCGAAACGACTCCTCTAC 57.062 43.478 0.00 0.00 0.00 2.59
3611 11604 0.801251 ACCGAAACGACTCCTCTACG 59.199 55.000 0.00 0.00 0.00 3.51
3613 11606 1.062294 CCGAAACGACTCCTCTACGAG 59.938 57.143 0.00 0.00 35.88 4.18
3618 11611 1.764180 CGACTCCTCTACGAGCGGTC 61.764 65.000 4.06 4.06 32.79 4.79
3649 11642 3.056328 GTTTCCAGAGGGGCACGC 61.056 66.667 0.00 0.00 43.76 5.34
3650 11643 4.344865 TTTCCAGAGGGGCACGCC 62.345 66.667 0.00 0.00 44.92 5.68
3660 11653 2.573340 GGCACGCCCCAAAATCTG 59.427 61.111 0.00 0.00 0.00 2.90
3662 11655 1.665442 GCACGCCCCAAAATCTGTT 59.335 52.632 0.00 0.00 0.00 3.16
3683 11676 7.394359 TCTGTTCCCTCCTTGAATTTAAATCTG 59.606 37.037 0.10 0.00 0.00 2.90
3707 11700 8.167605 TGGAGTTTCGTAATTAATTTCAACCA 57.832 30.769 5.91 3.89 0.00 3.67
3709 11702 7.539710 GGAGTTTCGTAATTAATTTCAACCACC 59.460 37.037 5.91 6.20 0.00 4.61
3710 11703 7.372714 AGTTTCGTAATTAATTTCAACCACCC 58.627 34.615 5.91 0.00 0.00 4.61
3711 11704 7.231925 AGTTTCGTAATTAATTTCAACCACCCT 59.768 33.333 5.91 0.00 0.00 4.34
3712 11705 7.527568 TTCGTAATTAATTTCAACCACCCTT 57.472 32.000 5.91 0.00 0.00 3.95
3713 11706 8.632906 TTCGTAATTAATTTCAACCACCCTTA 57.367 30.769 5.91 0.00 0.00 2.69
3714 11707 8.810990 TCGTAATTAATTTCAACCACCCTTAT 57.189 30.769 5.91 0.00 0.00 1.73
3715 11708 9.245481 TCGTAATTAATTTCAACCACCCTTATT 57.755 29.630 5.91 0.00 0.00 1.40
3723 11716 9.541884 AATTTCAACCACCCTTATTATAACTGT 57.458 29.630 0.00 0.00 0.00 3.55
3724 11717 8.570068 TTTCAACCACCCTTATTATAACTGTC 57.430 34.615 0.00 0.00 0.00 3.51
3725 11718 6.342906 TCAACCACCCTTATTATAACTGTCG 58.657 40.000 0.00 0.00 0.00 4.35
3726 11719 5.286267 ACCACCCTTATTATAACTGTCGG 57.714 43.478 0.00 0.00 0.00 4.79
3727 11720 4.102054 ACCACCCTTATTATAACTGTCGGG 59.898 45.833 5.11 5.11 36.52 5.14
3728 11721 4.504340 CCACCCTTATTATAACTGTCGGGG 60.504 50.000 9.93 7.03 34.75 5.73
3729 11722 3.072038 ACCCTTATTATAACTGTCGGGGC 59.928 47.826 9.93 0.00 35.09 5.80
3746 12074 3.433882 CGGGGCCCACTAATTAATACACA 60.434 47.826 26.86 0.00 0.00 3.72
3753 12081 5.592688 CCCACTAATTAATACACACCCCTTG 59.407 44.000 0.00 0.00 0.00 3.61
3761 12089 9.541884 AATTAATACACACCCCTTGATTTAACT 57.458 29.630 0.00 0.00 0.00 2.24
3762 12090 6.834168 AATACACACCCCTTGATTTAACTG 57.166 37.500 0.00 0.00 0.00 3.16
3763 12091 4.178956 ACACACCCCTTGATTTAACTGT 57.821 40.909 0.00 0.00 0.00 3.55
3764 12092 3.888930 ACACACCCCTTGATTTAACTGTG 59.111 43.478 0.00 0.00 35.08 3.66
3766 12094 3.139397 ACACCCCTTGATTTAACTGTGGA 59.861 43.478 0.00 0.00 0.00 4.02
3767 12095 3.758554 CACCCCTTGATTTAACTGTGGAG 59.241 47.826 0.00 0.00 0.00 3.86
3768 12096 3.245264 ACCCCTTGATTTAACTGTGGAGG 60.245 47.826 0.00 0.00 0.00 4.30
3807 12258 6.717289 TCAGTACCCTTGCACATAAACTATT 58.283 36.000 0.00 0.00 0.00 1.73
3811 12262 5.445964 ACCCTTGCACATAAACTATTAGGG 58.554 41.667 9.64 9.64 37.68 3.53
3812 12263 4.278419 CCCTTGCACATAAACTATTAGGGC 59.722 45.833 0.00 0.00 0.00 5.19
3813 12264 4.887071 CCTTGCACATAAACTATTAGGGCA 59.113 41.667 0.00 0.00 31.71 5.36
3814 12265 5.536161 CCTTGCACATAAACTATTAGGGCAT 59.464 40.000 0.00 0.00 32.83 4.40
3815 12266 6.294176 CCTTGCACATAAACTATTAGGGCATC 60.294 42.308 0.00 0.00 32.83 3.91
3816 12267 5.940617 TGCACATAAACTATTAGGGCATCT 58.059 37.500 0.00 0.00 29.98 2.90
3817 12268 5.997746 TGCACATAAACTATTAGGGCATCTC 59.002 40.000 0.00 0.00 29.98 2.75
3818 12269 6.183361 TGCACATAAACTATTAGGGCATCTCT 60.183 38.462 0.00 0.00 29.98 3.10
3819 12270 7.016170 TGCACATAAACTATTAGGGCATCTCTA 59.984 37.037 0.00 0.00 29.98 2.43
3820 12271 7.547370 GCACATAAACTATTAGGGCATCTCTAG 59.453 40.741 0.00 0.00 0.00 2.43
3821 12272 7.547370 CACATAAACTATTAGGGCATCTCTAGC 59.453 40.741 0.00 0.00 0.00 3.42
3827 12278 2.737830 GGCATCTCTAGCCCCGTC 59.262 66.667 0.00 0.00 46.50 4.79
3828 12279 2.737830 GCATCTCTAGCCCCGTCC 59.262 66.667 0.00 0.00 0.00 4.79
3829 12280 2.134287 GCATCTCTAGCCCCGTCCA 61.134 63.158 0.00 0.00 0.00 4.02
3830 12281 1.742768 CATCTCTAGCCCCGTCCAC 59.257 63.158 0.00 0.00 0.00 4.02
3831 12282 1.043116 CATCTCTAGCCCCGTCCACA 61.043 60.000 0.00 0.00 0.00 4.17
3832 12283 0.757188 ATCTCTAGCCCCGTCCACAG 60.757 60.000 0.00 0.00 0.00 3.66
3833 12284 2.363795 TCTAGCCCCGTCCACAGG 60.364 66.667 0.00 0.00 0.00 4.00
3834 12285 2.363795 CTAGCCCCGTCCACAGGA 60.364 66.667 0.00 0.00 0.00 3.86
3835 12286 1.987855 CTAGCCCCGTCCACAGGAA 60.988 63.158 0.00 0.00 31.38 3.36
3836 12287 1.961180 CTAGCCCCGTCCACAGGAAG 61.961 65.000 0.00 0.00 31.38 3.46
3840 12291 3.322466 CCGTCCACAGGAAGGCCT 61.322 66.667 0.00 0.00 43.64 5.19
3841 12292 2.266055 CGTCCACAGGAAGGCCTC 59.734 66.667 5.23 0.00 44.80 4.70
3842 12293 2.671682 GTCCACAGGAAGGCCTCC 59.328 66.667 5.23 9.66 44.80 4.30
3843 12294 2.610859 TCCACAGGAAGGCCTCCC 60.611 66.667 5.23 0.58 46.81 4.30
3844 12295 3.732849 CCACAGGAAGGCCTCCCC 61.733 72.222 3.35 10.50 46.81 4.81
3845 12296 2.935481 CACAGGAAGGCCTCCCCA 60.935 66.667 22.02 0.00 46.81 4.96
3846 12297 2.612115 ACAGGAAGGCCTCCCCAG 60.612 66.667 22.02 17.51 46.81 4.45
3847 12298 3.415087 CAGGAAGGCCTCCCCAGG 61.415 72.222 22.02 12.25 46.81 4.45
3855 12306 4.764143 CCTCCCCAGGCGATTTTT 57.236 55.556 0.00 0.00 30.98 1.94
3888 12339 3.656045 AAAAACGGCCCAGTCGCG 61.656 61.111 0.00 0.00 32.11 5.87
3897 12348 4.379243 CCAGTCGCGCCTTCAGGT 62.379 66.667 0.00 0.00 37.57 4.00
3899 12350 3.616721 AGTCGCGCCTTCAGGTGT 61.617 61.111 0.00 0.00 46.99 4.16
3900 12351 3.112709 GTCGCGCCTTCAGGTGTC 61.113 66.667 0.00 0.35 46.99 3.67
3901 12352 4.373116 TCGCGCCTTCAGGTGTCC 62.373 66.667 0.00 0.00 46.99 4.02
3903 12354 4.373116 GCGCCTTCAGGTGTCCGA 62.373 66.667 8.22 0.00 46.99 4.55
3904 12355 2.579201 CGCCTTCAGGTGTCCGAT 59.421 61.111 0.00 0.00 40.69 4.18
3905 12356 1.079127 CGCCTTCAGGTGTCCGATT 60.079 57.895 0.00 0.00 40.69 3.34
3906 12357 0.673644 CGCCTTCAGGTGTCCGATTT 60.674 55.000 0.00 0.00 40.69 2.17
3907 12358 1.534729 GCCTTCAGGTGTCCGATTTT 58.465 50.000 0.00 0.00 37.57 1.82
3908 12359 1.468914 GCCTTCAGGTGTCCGATTTTC 59.531 52.381 0.00 0.00 37.57 2.29
3909 12360 1.732259 CCTTCAGGTGTCCGATTTTCG 59.268 52.381 0.00 0.00 40.07 3.46
3910 12361 1.128692 CTTCAGGTGTCCGATTTTCGC 59.871 52.381 0.00 0.00 38.82 4.70
3911 12362 0.672401 TCAGGTGTCCGATTTTCGCC 60.672 55.000 0.00 0.00 38.82 5.54
3912 12363 1.740296 AGGTGTCCGATTTTCGCCG 60.740 57.895 0.00 0.00 38.82 6.46
3913 12364 2.746803 GGTGTCCGATTTTCGCCGG 61.747 63.158 0.00 0.00 46.57 6.13
3914 12365 3.122323 TGTCCGATTTTCGCCGGC 61.122 61.111 19.07 19.07 44.96 6.13
3915 12366 3.872728 GTCCGATTTTCGCCGGCC 61.873 66.667 23.46 4.12 44.96 6.13
3916 12367 4.090588 TCCGATTTTCGCCGGCCT 62.091 61.111 23.46 0.00 44.96 5.19
3917 12368 2.202960 CCGATTTTCGCCGGCCTA 60.203 61.111 23.46 6.42 38.82 3.93
3918 12369 2.244651 CCGATTTTCGCCGGCCTAG 61.245 63.158 23.46 7.26 38.82 3.02
3919 12370 2.244651 CGATTTTCGCCGGCCTAGG 61.245 63.158 23.46 3.67 31.14 3.02
3930 12381 3.188011 GCCTAGGCCGAAAACAGC 58.812 61.111 24.19 0.00 34.56 4.40
3931 12382 2.750888 GCCTAGGCCGAAAACAGCG 61.751 63.158 24.19 0.00 34.56 5.18
3932 12383 2.750888 CCTAGGCCGAAAACAGCGC 61.751 63.158 0.00 0.00 0.00 5.92
3933 12384 2.744709 TAGGCCGAAAACAGCGCC 60.745 61.111 2.29 0.00 0.00 6.53
3996 12447 3.292159 GCCGGGGCGAACTGTTTT 61.292 61.111 2.18 0.00 0.00 2.43
3997 12448 2.642700 CCGGGGCGAACTGTTTTG 59.357 61.111 0.00 0.00 0.00 2.44
3998 12449 2.642700 CGGGGCGAACTGTTTTGG 59.357 61.111 0.00 0.00 0.00 3.28
3999 12450 2.338620 GGGGCGAACTGTTTTGGC 59.661 61.111 10.46 10.46 40.35 4.52
4000 12451 2.050442 GGGCGAACTGTTTTGGCG 60.050 61.111 11.96 5.00 41.72 5.69
4001 12452 2.729491 GGCGAACTGTTTTGGCGC 60.729 61.111 13.79 13.79 46.20 6.53
4002 12453 3.091022 GCGAACTGTTTTGGCGCG 61.091 61.111 0.00 0.00 38.24 6.86
4003 12454 2.629210 CGAACTGTTTTGGCGCGA 59.371 55.556 12.10 0.00 0.00 5.87
4004 12455 1.010574 CGAACTGTTTTGGCGCGAA 60.011 52.632 12.10 0.00 0.00 4.70
4005 12456 0.590230 CGAACTGTTTTGGCGCGAAA 60.590 50.000 13.91 13.91 0.00 3.46
4006 12457 0.843872 GAACTGTTTTGGCGCGAAAC 59.156 50.000 23.22 23.22 38.01 2.78
4007 12458 0.171455 AACTGTTTTGGCGCGAAACA 59.829 45.000 27.74 27.74 43.03 2.83
4008 12459 4.700037 TGTTTTGGCGCGAAACAG 57.300 50.000 26.68 0.00 41.19 3.16
4009 12460 1.587613 TGTTTTGGCGCGAAACAGC 60.588 52.632 26.68 16.92 41.19 4.40
4015 12466 2.502510 GCGCGAAACAGCCACATG 60.503 61.111 12.10 0.00 0.00 3.21
4016 12467 2.502510 CGCGAAACAGCCACATGC 60.503 61.111 0.00 0.00 41.71 4.06
4017 12468 2.126346 GCGAAACAGCCACATGCC 60.126 61.111 0.00 0.00 42.71 4.40
4018 12469 2.568090 CGAAACAGCCACATGCCC 59.432 61.111 0.00 0.00 42.71 5.36
4019 12470 2.568090 GAAACAGCCACATGCCCG 59.432 61.111 0.00 0.00 42.71 6.13
4020 12471 3.631487 GAAACAGCCACATGCCCGC 62.631 63.158 0.00 0.00 42.71 6.13
4047 12498 4.719369 GACACGGCGCCTCGTCTT 62.719 66.667 28.27 12.17 41.86 3.01
4048 12499 4.719369 ACACGGCGCCTCGTCTTC 62.719 66.667 26.68 0.00 41.86 2.87
4054 12505 3.702048 CGCCTCGTCTTCCCCCAA 61.702 66.667 0.00 0.00 0.00 4.12
4055 12506 2.046217 GCCTCGTCTTCCCCCAAC 60.046 66.667 0.00 0.00 0.00 3.77
4056 12507 2.264794 CCTCGTCTTCCCCCAACG 59.735 66.667 0.00 0.00 37.74 4.10
4057 12508 2.264794 CTCGTCTTCCCCCAACGG 59.735 66.667 0.00 0.00 37.05 4.44
4058 12509 3.952628 CTCGTCTTCCCCCAACGGC 62.953 68.421 0.00 0.00 37.05 5.68
4060 12511 3.647771 GTCTTCCCCCAACGGCCT 61.648 66.667 0.00 0.00 0.00 5.19
4061 12512 3.327404 TCTTCCCCCAACGGCCTC 61.327 66.667 0.00 0.00 0.00 4.70
4062 12513 4.778143 CTTCCCCCAACGGCCTCG 62.778 72.222 0.00 0.00 43.02 4.63
4066 12517 4.653888 CCCCAACGGCCTCGGTTT 62.654 66.667 0.00 0.00 41.39 3.27
4067 12518 3.053896 CCCAACGGCCTCGGTTTC 61.054 66.667 0.00 0.00 41.39 2.78
4068 12519 3.053896 CCAACGGCCTCGGTTTCC 61.054 66.667 0.00 0.00 41.39 3.13
4085 12536 3.923013 CGCAGGGAATCAATGGCA 58.077 55.556 0.00 0.00 0.00 4.92
4086 12537 2.191680 CGCAGGGAATCAATGGCAA 58.808 52.632 0.00 0.00 0.00 4.52
4087 12538 0.101759 CGCAGGGAATCAATGGCAAG 59.898 55.000 0.00 0.00 0.00 4.01
4088 12539 0.462789 GCAGGGAATCAATGGCAAGG 59.537 55.000 0.00 0.00 0.00 3.61
4089 12540 0.462789 CAGGGAATCAATGGCAAGGC 59.537 55.000 0.00 0.00 0.00 4.35
4090 12541 0.337428 AGGGAATCAATGGCAAGGCT 59.663 50.000 0.00 0.00 0.00 4.58
4091 12542 0.462789 GGGAATCAATGGCAAGGCTG 59.537 55.000 0.00 0.00 0.00 4.85
4105 12556 3.064324 GCTGCCGACCTTGCCATT 61.064 61.111 0.00 0.00 0.00 3.16
4106 12557 2.879907 CTGCCGACCTTGCCATTG 59.120 61.111 0.00 0.00 0.00 2.82
4107 12558 1.675310 CTGCCGACCTTGCCATTGA 60.675 57.895 0.00 0.00 0.00 2.57
4108 12559 1.001020 TGCCGACCTTGCCATTGAT 60.001 52.632 0.00 0.00 0.00 2.57
4109 12560 0.611618 TGCCGACCTTGCCATTGATT 60.612 50.000 0.00 0.00 0.00 2.57
4110 12561 0.101219 GCCGACCTTGCCATTGATTC 59.899 55.000 0.00 0.00 0.00 2.52
4111 12562 0.740737 CCGACCTTGCCATTGATTCC 59.259 55.000 0.00 0.00 0.00 3.01
4112 12563 1.683011 CCGACCTTGCCATTGATTCCT 60.683 52.381 0.00 0.00 0.00 3.36
4113 12564 1.672881 CGACCTTGCCATTGATTCCTC 59.327 52.381 0.00 0.00 0.00 3.71
4114 12565 2.726821 GACCTTGCCATTGATTCCTCA 58.273 47.619 0.00 0.00 0.00 3.86
4115 12566 2.424956 GACCTTGCCATTGATTCCTCAC 59.575 50.000 0.00 0.00 0.00 3.51
4116 12567 1.402968 CCTTGCCATTGATTCCTCACG 59.597 52.381 0.00 0.00 0.00 4.35
4117 12568 1.402968 CTTGCCATTGATTCCTCACGG 59.597 52.381 0.00 0.00 0.00 4.94
4118 12569 0.394216 TGCCATTGATTCCTCACGGG 60.394 55.000 0.00 0.00 0.00 5.28
4119 12570 1.728490 GCCATTGATTCCTCACGGGC 61.728 60.000 0.00 0.00 41.19 6.13
4120 12571 1.439353 CCATTGATTCCTCACGGGCG 61.439 60.000 0.00 0.00 34.39 6.13
4121 12572 1.153168 ATTGATTCCTCACGGGCGG 60.153 57.895 0.00 0.00 34.39 6.13
4122 12573 3.969250 TTGATTCCTCACGGGCGGC 62.969 63.158 0.00 0.00 34.39 6.53
4169 12620 4.849329 CCTCCCTCGCACGCGTAC 62.849 72.222 13.44 5.01 40.74 3.67
4170 12621 4.111016 CTCCCTCGCACGCGTACA 62.111 66.667 13.44 0.00 40.74 2.90
4171 12622 4.409218 TCCCTCGCACGCGTACAC 62.409 66.667 13.44 3.32 40.74 2.90
4172 12623 4.710695 CCCTCGCACGCGTACACA 62.711 66.667 13.44 0.00 40.74 3.72
4173 12624 3.467119 CCTCGCACGCGTACACAC 61.467 66.667 13.44 0.00 40.74 3.82
4193 12644 2.126228 GTGCGGCGCGGCTATATA 60.126 61.111 35.00 16.23 0.00 0.86
4194 12645 2.158959 GTGCGGCGCGGCTATATAG 61.159 63.158 35.00 14.72 0.00 1.31
4223 12674 4.624364 CACTCGCCTGTGCCCACA 62.624 66.667 0.71 0.71 39.32 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.458573 TCCTACTTTAAAGTGCATTGAAAAGA 57.541 30.769 27.40 4.71 40.07 2.52
1 2 9.528018 TTTCCTACTTTAAAGTGCATTGAAAAG 57.472 29.630 27.40 14.55 40.07 2.27
2 3 9.877178 TTTTCCTACTTTAAAGTGCATTGAAAA 57.123 25.926 27.40 24.83 40.07 2.29
3 4 9.877178 TTTTTCCTACTTTAAAGTGCATTGAAA 57.123 25.926 27.40 21.81 40.07 2.69
18 19 9.315363 TGAGAGAGAGAAGTATTTTTCCTACTT 57.685 33.333 0.00 0.00 41.05 2.24
19 20 8.887264 TGAGAGAGAGAAGTATTTTTCCTACT 57.113 34.615 0.00 0.00 0.00 2.57
23 24 9.877178 TGTAATGAGAGAGAGAAGTATTTTTCC 57.123 33.333 0.00 0.00 0.00 3.13
25 26 9.360093 CGTGTAATGAGAGAGAGAAGTATTTTT 57.640 33.333 0.00 0.00 0.00 1.94
26 27 7.976734 CCGTGTAATGAGAGAGAGAAGTATTTT 59.023 37.037 0.00 0.00 0.00 1.82
27 28 7.122948 ACCGTGTAATGAGAGAGAGAAGTATTT 59.877 37.037 0.00 0.00 0.00 1.40
28 29 6.603997 ACCGTGTAATGAGAGAGAGAAGTATT 59.396 38.462 0.00 0.00 0.00 1.89
29 30 6.123651 ACCGTGTAATGAGAGAGAGAAGTAT 58.876 40.000 0.00 0.00 0.00 2.12
30 31 5.498393 ACCGTGTAATGAGAGAGAGAAGTA 58.502 41.667 0.00 0.00 0.00 2.24
31 32 4.337145 ACCGTGTAATGAGAGAGAGAAGT 58.663 43.478 0.00 0.00 0.00 3.01
32 33 4.974368 ACCGTGTAATGAGAGAGAGAAG 57.026 45.455 0.00 0.00 0.00 2.85
33 34 7.406031 AATTACCGTGTAATGAGAGAGAGAA 57.594 36.000 9.21 0.00 0.00 2.87
34 35 8.515695 TTAATTACCGTGTAATGAGAGAGAGA 57.484 34.615 9.21 0.00 0.00 3.10
35 36 8.622157 TCTTAATTACCGTGTAATGAGAGAGAG 58.378 37.037 9.21 0.00 0.00 3.20
36 37 8.404000 GTCTTAATTACCGTGTAATGAGAGAGA 58.596 37.037 15.42 10.22 0.00 3.10
37 38 7.648510 GGTCTTAATTACCGTGTAATGAGAGAG 59.351 40.741 15.42 8.96 0.00 3.20
38 39 7.123098 TGGTCTTAATTACCGTGTAATGAGAGA 59.877 37.037 15.42 12.66 40.08 3.10
39 40 7.262772 TGGTCTTAATTACCGTGTAATGAGAG 58.737 38.462 15.42 11.42 40.08 3.20
40 41 7.172868 TGGTCTTAATTACCGTGTAATGAGA 57.827 36.000 9.21 11.55 40.08 3.27
41 42 7.837202 TTGGTCTTAATTACCGTGTAATGAG 57.163 36.000 9.21 10.06 40.08 2.90
42 43 9.887629 TTATTGGTCTTAATTACCGTGTAATGA 57.112 29.630 9.21 1.31 40.08 2.57
43 44 9.925268 GTTATTGGTCTTAATTACCGTGTAATG 57.075 33.333 9.21 0.53 40.08 1.90
44 45 9.669887 TGTTATTGGTCTTAATTACCGTGTAAT 57.330 29.630 4.14 4.14 40.08 1.89
45 46 9.499479 TTGTTATTGGTCTTAATTACCGTGTAA 57.501 29.630 3.43 0.01 40.08 2.41
46 47 9.669887 ATTGTTATTGGTCTTAATTACCGTGTA 57.330 29.630 3.43 0.00 40.08 2.90
47 48 7.982761 TTGTTATTGGTCTTAATTACCGTGT 57.017 32.000 3.43 0.00 40.08 4.49
48 49 8.889717 AGATTGTTATTGGTCTTAATTACCGTG 58.110 33.333 3.43 0.00 40.08 4.94
56 57 9.173021 CCATGTGTAGATTGTTATTGGTCTTAA 57.827 33.333 0.00 0.00 0.00 1.85
57 58 8.325787 ACCATGTGTAGATTGTTATTGGTCTTA 58.674 33.333 0.00 0.00 0.00 2.10
58 59 7.175104 ACCATGTGTAGATTGTTATTGGTCTT 58.825 34.615 0.00 0.00 0.00 3.01
59 60 6.721318 ACCATGTGTAGATTGTTATTGGTCT 58.279 36.000 0.00 0.00 0.00 3.85
60 61 6.823689 AGACCATGTGTAGATTGTTATTGGTC 59.176 38.462 9.64 9.64 40.63 4.02
61 62 6.721318 AGACCATGTGTAGATTGTTATTGGT 58.279 36.000 0.00 0.00 0.00 3.67
62 63 7.554118 AGAAGACCATGTGTAGATTGTTATTGG 59.446 37.037 0.00 0.00 0.00 3.16
63 64 8.498054 AGAAGACCATGTGTAGATTGTTATTG 57.502 34.615 0.00 0.00 0.00 1.90
67 68 9.520515 AATTAAGAAGACCATGTGTAGATTGTT 57.479 29.630 0.00 0.00 0.00 2.83
68 69 9.520515 AAATTAAGAAGACCATGTGTAGATTGT 57.479 29.630 0.00 0.00 0.00 2.71
75 76 9.912634 CATGTAAAAATTAAGAAGACCATGTGT 57.087 29.630 0.00 0.00 0.00 3.72
76 77 8.863049 GCATGTAAAAATTAAGAAGACCATGTG 58.137 33.333 0.00 0.00 0.00 3.21
77 78 8.584157 TGCATGTAAAAATTAAGAAGACCATGT 58.416 29.630 0.00 0.00 0.00 3.21
78 79 8.863049 GTGCATGTAAAAATTAAGAAGACCATG 58.137 33.333 0.00 0.00 0.00 3.66
79 80 8.806146 AGTGCATGTAAAAATTAAGAAGACCAT 58.194 29.630 0.00 0.00 0.00 3.55
80 81 8.177119 AGTGCATGTAAAAATTAAGAAGACCA 57.823 30.769 0.00 0.00 0.00 4.02
93 94 9.906660 CCTCAAATAAGTTAAGTGCATGTAAAA 57.093 29.630 0.00 0.00 0.00 1.52
94 95 8.519526 CCCTCAAATAAGTTAAGTGCATGTAAA 58.480 33.333 0.00 0.00 0.00 2.01
95 96 7.668052 ACCCTCAAATAAGTTAAGTGCATGTAA 59.332 33.333 0.00 0.00 0.00 2.41
96 97 7.120579 CACCCTCAAATAAGTTAAGTGCATGTA 59.879 37.037 0.00 0.00 0.00 2.29
97 98 6.010219 ACCCTCAAATAAGTTAAGTGCATGT 58.990 36.000 0.00 0.00 0.00 3.21
98 99 6.324819 CACCCTCAAATAAGTTAAGTGCATG 58.675 40.000 0.00 0.00 0.00 4.06
99 100 5.418840 CCACCCTCAAATAAGTTAAGTGCAT 59.581 40.000 0.00 0.00 0.00 3.96
100 101 4.764823 CCACCCTCAAATAAGTTAAGTGCA 59.235 41.667 0.00 0.00 0.00 4.57
101 102 4.157840 CCCACCCTCAAATAAGTTAAGTGC 59.842 45.833 0.00 0.00 0.00 4.40
102 103 5.321927 ACCCACCCTCAAATAAGTTAAGTG 58.678 41.667 0.00 0.00 0.00 3.16
103 104 5.594199 ACCCACCCTCAAATAAGTTAAGT 57.406 39.130 0.00 0.00 0.00 2.24
104 105 8.589701 AATTACCCACCCTCAAATAAGTTAAG 57.410 34.615 0.00 0.00 0.00 1.85
107 108 8.959676 TTTAATTACCCACCCTCAAATAAGTT 57.040 30.769 0.00 0.00 0.00 2.66
108 109 8.959676 TTTTAATTACCCACCCTCAAATAAGT 57.040 30.769 0.00 0.00 0.00 2.24
109 110 9.869757 CTTTTTAATTACCCACCCTCAAATAAG 57.130 33.333 0.00 0.00 0.00 1.73
110 111 8.817876 CCTTTTTAATTACCCACCCTCAAATAA 58.182 33.333 0.00 0.00 0.00 1.40
111 112 8.178132 TCCTTTTTAATTACCCACCCTCAAATA 58.822 33.333 0.00 0.00 0.00 1.40
112 113 7.020009 TCCTTTTTAATTACCCACCCTCAAAT 58.980 34.615 0.00 0.00 0.00 2.32
113 114 6.382925 TCCTTTTTAATTACCCACCCTCAAA 58.617 36.000 0.00 0.00 0.00 2.69
114 115 5.966684 TCCTTTTTAATTACCCACCCTCAA 58.033 37.500 0.00 0.00 0.00 3.02
115 116 5.313772 TCTCCTTTTTAATTACCCACCCTCA 59.686 40.000 0.00 0.00 0.00 3.86
116 117 5.823312 TCTCCTTTTTAATTACCCACCCTC 58.177 41.667 0.00 0.00 0.00 4.30
117 118 5.554350 TCTCTCCTTTTTAATTACCCACCCT 59.446 40.000 0.00 0.00 0.00 4.34
118 119 5.823312 TCTCTCCTTTTTAATTACCCACCC 58.177 41.667 0.00 0.00 0.00 4.61
119 120 6.718294 TCTCTCTCCTTTTTAATTACCCACC 58.282 40.000 0.00 0.00 0.00 4.61
120 121 9.549078 CTATCTCTCTCCTTTTTAATTACCCAC 57.451 37.037 0.00 0.00 0.00 4.61
121 122 9.280456 ACTATCTCTCTCCTTTTTAATTACCCA 57.720 33.333 0.00 0.00 0.00 4.51
122 123 9.549078 CACTATCTCTCTCCTTTTTAATTACCC 57.451 37.037 0.00 0.00 0.00 3.69
123 124 9.549078 CCACTATCTCTCTCCTTTTTAATTACC 57.451 37.037 0.00 0.00 0.00 2.85
124 125 9.047371 GCCACTATCTCTCTCCTTTTTAATTAC 57.953 37.037 0.00 0.00 0.00 1.89
125 126 8.993424 AGCCACTATCTCTCTCCTTTTTAATTA 58.007 33.333 0.00 0.00 0.00 1.40
126 127 7.866870 AGCCACTATCTCTCTCCTTTTTAATT 58.133 34.615 0.00 0.00 0.00 1.40
127 128 7.444703 AGCCACTATCTCTCTCCTTTTTAAT 57.555 36.000 0.00 0.00 0.00 1.40
128 129 6.875972 AGCCACTATCTCTCTCCTTTTTAA 57.124 37.500 0.00 0.00 0.00 1.52
129 130 6.644347 CAAGCCACTATCTCTCTCCTTTTTA 58.356 40.000 0.00 0.00 0.00 1.52
130 131 5.495640 CAAGCCACTATCTCTCTCCTTTTT 58.504 41.667 0.00 0.00 0.00 1.94
131 132 4.625083 GCAAGCCACTATCTCTCTCCTTTT 60.625 45.833 0.00 0.00 0.00 2.27
132 133 3.118445 GCAAGCCACTATCTCTCTCCTTT 60.118 47.826 0.00 0.00 0.00 3.11
133 134 2.433970 GCAAGCCACTATCTCTCTCCTT 59.566 50.000 0.00 0.00 0.00 3.36
134 135 2.038659 GCAAGCCACTATCTCTCTCCT 58.961 52.381 0.00 0.00 0.00 3.69
135 136 1.759445 TGCAAGCCACTATCTCTCTCC 59.241 52.381 0.00 0.00 0.00 3.71
136 137 3.749665 ATGCAAGCCACTATCTCTCTC 57.250 47.619 0.00 0.00 0.00 3.20
137 138 4.500499 AAATGCAAGCCACTATCTCTCT 57.500 40.909 0.00 0.00 0.00 3.10
138 139 5.449725 GGAAAAATGCAAGCCACTATCTCTC 60.450 44.000 0.00 0.00 0.00 3.20
139 140 4.400567 GGAAAAATGCAAGCCACTATCTCT 59.599 41.667 0.00 0.00 0.00 3.10
140 141 4.158394 TGGAAAAATGCAAGCCACTATCTC 59.842 41.667 0.00 0.00 0.00 2.75
141 142 4.088634 TGGAAAAATGCAAGCCACTATCT 58.911 39.130 0.00 0.00 0.00 1.98
142 143 4.454728 TGGAAAAATGCAAGCCACTATC 57.545 40.909 0.00 0.00 0.00 2.08
143 144 4.888326 TTGGAAAAATGCAAGCCACTAT 57.112 36.364 0.00 0.00 0.00 2.12
144 145 4.567971 CATTGGAAAAATGCAAGCCACTA 58.432 39.130 0.00 0.00 0.00 2.74
145 146 3.404899 CATTGGAAAAATGCAAGCCACT 58.595 40.909 0.00 0.00 0.00 4.00
146 147 3.817148 CATTGGAAAAATGCAAGCCAC 57.183 42.857 0.00 0.00 0.00 5.01
197 198 9.220767 GGTGAAGAGTGTACATCTAGAAATTTT 57.779 33.333 0.00 0.00 0.00 1.82
198 199 8.375506 TGGTGAAGAGTGTACATCTAGAAATTT 58.624 33.333 0.00 0.00 0.00 1.82
199 200 7.907389 TGGTGAAGAGTGTACATCTAGAAATT 58.093 34.615 0.00 0.00 0.00 1.82
200 201 7.397476 TCTGGTGAAGAGTGTACATCTAGAAAT 59.603 37.037 0.00 0.00 0.00 2.17
201 202 6.719829 TCTGGTGAAGAGTGTACATCTAGAAA 59.280 38.462 0.00 0.00 0.00 2.52
202 203 6.151312 GTCTGGTGAAGAGTGTACATCTAGAA 59.849 42.308 0.00 0.00 34.84 2.10
203 204 5.648526 GTCTGGTGAAGAGTGTACATCTAGA 59.351 44.000 0.00 0.00 34.84 2.43
204 205 5.447954 CGTCTGGTGAAGAGTGTACATCTAG 60.448 48.000 0.00 0.00 34.84 2.43
205 206 4.395231 CGTCTGGTGAAGAGTGTACATCTA 59.605 45.833 0.00 0.00 34.84 1.98
206 207 3.191581 CGTCTGGTGAAGAGTGTACATCT 59.808 47.826 0.00 0.27 34.84 2.90
207 208 3.502920 CGTCTGGTGAAGAGTGTACATC 58.497 50.000 0.00 0.00 34.84 3.06
208 209 2.231478 CCGTCTGGTGAAGAGTGTACAT 59.769 50.000 0.00 0.00 34.84 2.29
209 210 1.611977 CCGTCTGGTGAAGAGTGTACA 59.388 52.381 0.00 0.00 34.84 2.90
210 211 1.884579 TCCGTCTGGTGAAGAGTGTAC 59.115 52.381 0.00 0.00 34.84 2.90
211 212 2.160205 CTCCGTCTGGTGAAGAGTGTA 58.840 52.381 0.00 0.00 34.84 2.90
212 213 0.962489 CTCCGTCTGGTGAAGAGTGT 59.038 55.000 0.00 0.00 34.84 3.55
213 214 0.962489 ACTCCGTCTGGTGAAGAGTG 59.038 55.000 0.00 0.00 36.98 3.51
214 215 0.962489 CACTCCGTCTGGTGAAGAGT 59.038 55.000 0.00 0.00 38.10 3.24
215 216 1.201181 CTCACTCCGTCTGGTGAAGAG 59.799 57.143 0.00 0.00 41.13 2.85
216 217 1.248486 CTCACTCCGTCTGGTGAAGA 58.752 55.000 0.00 0.00 41.13 2.87
217 218 0.962489 ACTCACTCCGTCTGGTGAAG 59.038 55.000 0.00 0.00 41.13 3.02
218 219 2.281539 TACTCACTCCGTCTGGTGAA 57.718 50.000 0.00 0.00 41.13 3.18
219 220 2.160205 CTTACTCACTCCGTCTGGTGA 58.840 52.381 0.00 0.00 39.71 4.02
220 221 1.202582 CCTTACTCACTCCGTCTGGTG 59.797 57.143 0.00 0.00 36.30 4.17
221 222 1.546961 CCTTACTCACTCCGTCTGGT 58.453 55.000 0.00 0.00 36.30 4.00
222 223 0.173708 GCCTTACTCACTCCGTCTGG 59.826 60.000 0.00 0.00 0.00 3.86
223 224 0.888619 TGCCTTACTCACTCCGTCTG 59.111 55.000 0.00 0.00 0.00 3.51
224 225 1.178276 CTGCCTTACTCACTCCGTCT 58.822 55.000 0.00 0.00 0.00 4.18
225 226 0.173708 CCTGCCTTACTCACTCCGTC 59.826 60.000 0.00 0.00 0.00 4.79
226 227 0.251653 TCCTGCCTTACTCACTCCGT 60.252 55.000 0.00 0.00 0.00 4.69
227 228 1.115467 ATCCTGCCTTACTCACTCCG 58.885 55.000 0.00 0.00 0.00 4.63
228 229 1.139853 CCATCCTGCCTTACTCACTCC 59.860 57.143 0.00 0.00 0.00 3.85
229 230 1.139853 CCCATCCTGCCTTACTCACTC 59.860 57.143 0.00 0.00 0.00 3.51
230 231 1.207791 CCCATCCTGCCTTACTCACT 58.792 55.000 0.00 0.00 0.00 3.41
231 232 0.912486 ACCCATCCTGCCTTACTCAC 59.088 55.000 0.00 0.00 0.00 3.51
232 233 2.398588 CTACCCATCCTGCCTTACTCA 58.601 52.381 0.00 0.00 0.00 3.41
233 234 1.070914 GCTACCCATCCTGCCTTACTC 59.929 57.143 0.00 0.00 0.00 2.59
234 235 1.132500 GCTACCCATCCTGCCTTACT 58.868 55.000 0.00 0.00 0.00 2.24
235 236 0.108774 GGCTACCCATCCTGCCTTAC 59.891 60.000 0.00 0.00 41.92 2.34
236 237 0.327095 TGGCTACCCATCCTGCCTTA 60.327 55.000 0.00 0.00 45.11 2.69
237 238 1.214305 TTGGCTACCCATCCTGCCTT 61.214 55.000 0.00 0.00 45.11 4.35
238 239 1.214305 TTTGGCTACCCATCCTGCCT 61.214 55.000 0.00 0.00 45.11 4.75
239 240 0.324275 TTTTGGCTACCCATCCTGCC 60.324 55.000 0.00 0.00 41.78 4.85
240 241 1.780503 ATTTTGGCTACCCATCCTGC 58.219 50.000 0.00 0.00 41.78 4.85
241 242 4.437682 TCTATTTTGGCTACCCATCCTG 57.562 45.455 0.00 0.00 41.78 3.86
242 243 5.388654 CATTCTATTTTGGCTACCCATCCT 58.611 41.667 0.00 0.00 41.78 3.24
243 244 4.021981 GCATTCTATTTTGGCTACCCATCC 60.022 45.833 0.00 0.00 41.78 3.51
244 245 4.584325 TGCATTCTATTTTGGCTACCCATC 59.416 41.667 0.00 0.00 41.78 3.51
245 246 4.342092 GTGCATTCTATTTTGGCTACCCAT 59.658 41.667 0.00 0.00 41.78 4.00
246 247 3.699038 GTGCATTCTATTTTGGCTACCCA 59.301 43.478 0.00 0.00 40.06 4.51
247 248 3.699038 TGTGCATTCTATTTTGGCTACCC 59.301 43.478 0.00 0.00 0.00 3.69
248 249 4.157656 TGTGTGCATTCTATTTTGGCTACC 59.842 41.667 0.00 0.00 0.00 3.18
249 250 5.309323 TGTGTGCATTCTATTTTGGCTAC 57.691 39.130 0.00 0.00 0.00 3.58
250 251 5.973899 TTGTGTGCATTCTATTTTGGCTA 57.026 34.783 0.00 0.00 0.00 3.93
251 252 4.870123 TTGTGTGCATTCTATTTTGGCT 57.130 36.364 0.00 0.00 0.00 4.75
252 253 5.290158 CAGATTGTGTGCATTCTATTTTGGC 59.710 40.000 0.00 0.00 34.63 4.52
253 254 6.392354 ACAGATTGTGTGCATTCTATTTTGG 58.608 36.000 0.00 0.00 38.28 3.28
254 255 7.878477 AACAGATTGTGTGCATTCTATTTTG 57.122 32.000 0.00 0.00 40.26 2.44
255 256 8.891671 AAAACAGATTGTGTGCATTCTATTTT 57.108 26.923 0.00 0.00 40.26 1.82
256 257 8.891671 AAAAACAGATTGTGTGCATTCTATTT 57.108 26.923 0.00 0.00 40.26 1.40
278 279 4.211794 GTCACGTAAGGACCAATCGAAAAA 59.788 41.667 8.70 0.00 46.39 1.94
279 280 3.742369 GTCACGTAAGGACCAATCGAAAA 59.258 43.478 8.70 0.00 46.39 2.29
280 281 3.006110 AGTCACGTAAGGACCAATCGAAA 59.994 43.478 8.70 0.00 46.39 3.46
281 282 2.559668 AGTCACGTAAGGACCAATCGAA 59.440 45.455 8.70 0.00 46.39 3.71
282 283 2.165167 AGTCACGTAAGGACCAATCGA 58.835 47.619 8.70 0.00 46.39 3.59
283 284 2.649331 AGTCACGTAAGGACCAATCG 57.351 50.000 0.00 0.00 46.39 3.34
284 285 3.660865 ACAAGTCACGTAAGGACCAATC 58.339 45.455 0.00 0.00 46.39 2.67
285 286 3.764237 ACAAGTCACGTAAGGACCAAT 57.236 42.857 0.00 0.00 46.39 3.16
286 287 4.877378 ATACAAGTCACGTAAGGACCAA 57.123 40.909 0.00 0.00 46.39 3.67
287 288 4.877378 AATACAAGTCACGTAAGGACCA 57.123 40.909 0.00 0.00 46.39 4.02
288 289 5.467735 ACAAAATACAAGTCACGTAAGGACC 59.532 40.000 1.21 0.00 46.39 4.46
289 290 6.535274 ACAAAATACAAGTCACGTAAGGAC 57.465 37.500 0.00 0.00 46.39 3.85
290 291 7.556733 AAACAAAATACAAGTCACGTAAGGA 57.443 32.000 0.00 0.00 46.39 3.36
291 292 8.623310 AAAAACAAAATACAAGTCACGTAAGG 57.377 30.769 0.00 0.00 46.39 2.69
318 319 9.229784 CGGTAATACGCGTCTCATTTATATTAT 57.770 33.333 18.63 0.00 0.00 1.28
319 320 8.236586 ACGGTAATACGCGTCTCATTTATATTA 58.763 33.333 18.63 8.19 37.37 0.98
320 321 7.061441 CACGGTAATACGCGTCTCATTTATATT 59.939 37.037 18.63 9.32 37.37 1.28
321 322 6.525628 CACGGTAATACGCGTCTCATTTATAT 59.474 38.462 18.63 0.00 37.37 0.86
322 323 5.852755 CACGGTAATACGCGTCTCATTTATA 59.147 40.000 18.63 0.00 37.37 0.98
323 324 4.678287 CACGGTAATACGCGTCTCATTTAT 59.322 41.667 18.63 0.00 37.37 1.40
324 325 4.037021 CACGGTAATACGCGTCTCATTTA 58.963 43.478 18.63 4.73 37.37 1.40
325 326 2.855963 CACGGTAATACGCGTCTCATTT 59.144 45.455 18.63 5.78 37.37 2.32
326 327 2.097954 TCACGGTAATACGCGTCTCATT 59.902 45.455 18.63 13.43 37.37 2.57
327 328 1.672363 TCACGGTAATACGCGTCTCAT 59.328 47.619 18.63 0.00 37.37 2.90
328 329 1.085893 TCACGGTAATACGCGTCTCA 58.914 50.000 18.63 0.00 37.37 3.27
329 330 2.178474 TTCACGGTAATACGCGTCTC 57.822 50.000 18.63 4.56 37.37 3.36
330 331 2.634982 TTTCACGGTAATACGCGTCT 57.365 45.000 18.63 1.73 37.37 4.18
331 332 3.703558 TTTTTCACGGTAATACGCGTC 57.296 42.857 18.63 0.00 37.37 5.19
355 356 1.160137 GTCAGGCTGTTCGCATTCTT 58.840 50.000 15.27 0.00 41.67 2.52
394 398 4.864247 GTCCGCGTGTAAAATTCTAAGGTA 59.136 41.667 4.92 0.00 0.00 3.08
417 429 2.661709 CGCATTGTCGTTTACCAGTGTG 60.662 50.000 0.00 0.00 0.00 3.82
420 432 0.515564 GCGCATTGTCGTTTACCAGT 59.484 50.000 0.30 0.00 0.00 4.00
423 435 0.247145 CGAGCGCATTGTCGTTTACC 60.247 55.000 11.47 0.00 0.00 2.85
689 714 5.009911 TGGTAGCGACTAGTGAACAACTTTA 59.990 40.000 0.00 0.00 40.56 1.85
707 732 2.724520 CCAGGGCATTCATGGTAGC 58.275 57.895 0.00 0.00 42.03 3.58
780 1042 6.584942 TCGTGCTAACTATTGTAAACTGAGTG 59.415 38.462 0.00 0.00 0.00 3.51
874 1204 1.205893 GAATCCTTCGCCTCAGTCAGT 59.794 52.381 0.00 0.00 0.00 3.41
895 1225 0.597637 CTACCCGCGGCAGTATCTTG 60.598 60.000 22.85 4.97 0.00 3.02
942 1272 3.186409 CGGGCCAAGAATACACGAATATG 59.814 47.826 4.39 0.00 0.00 1.78
953 1283 1.227383 GATGGGACGGGCCAAGAAT 59.773 57.895 4.39 0.00 38.95 2.40
954 1284 2.674754 GATGGGACGGGCCAAGAA 59.325 61.111 4.39 0.00 38.95 2.52
956 1286 3.622060 AACGATGGGACGGGCCAAG 62.622 63.158 4.39 0.00 38.95 3.61
957 1287 3.615509 GAACGATGGGACGGGCCAA 62.616 63.158 4.39 0.00 38.95 4.52
959 1289 3.325201 AAGAACGATGGGACGGGCC 62.325 63.158 0.00 0.00 37.61 5.80
961 1291 1.449601 CCAAGAACGATGGGACGGG 60.450 63.158 0.00 0.00 37.61 5.28
972 1304 1.739067 CCCAGGACGATTCCAAGAAC 58.261 55.000 0.00 0.00 45.72 3.01
976 1308 2.267642 CGCCCAGGACGATTCCAA 59.732 61.111 0.00 0.00 45.72 3.53
995 1327 4.099419 TCAGCATGCCTATATATACACCCG 59.901 45.833 15.66 0.00 34.76 5.28
996 1328 5.614324 TCAGCATGCCTATATATACACCC 57.386 43.478 15.66 0.00 34.76 4.61
1046 1405 4.771356 TCGCGCCTCTCCGTTTCG 62.771 66.667 0.00 0.00 0.00 3.46
1361 1782 3.268595 AGGGGGAAGAAATATTTGACGGT 59.731 43.478 5.17 0.00 0.00 4.83
1395 1987 2.443416 TCAGTTTCGCTAGCCTCTACA 58.557 47.619 9.66 0.00 0.00 2.74
1419 2158 0.107831 CCCCACCAAAGAACACGAGA 59.892 55.000 0.00 0.00 0.00 4.04
1422 2161 2.903547 CGCCCCACCAAAGAACACG 61.904 63.158 0.00 0.00 0.00 4.49
1423 2162 1.527380 TCGCCCCACCAAAGAACAC 60.527 57.895 0.00 0.00 0.00 3.32
1427 2166 4.323477 CCGTCGCCCCACCAAAGA 62.323 66.667 0.00 0.00 0.00 2.52
1433 2172 3.834799 CCTAGACCGTCGCCCCAC 61.835 72.222 0.00 0.00 0.00 4.61
1434 2173 4.371417 ACCTAGACCGTCGCCCCA 62.371 66.667 0.00 0.00 0.00 4.96
1439 2182 2.023318 CCTAGCACCTAGACCGTCG 58.977 63.158 0.00 0.00 36.26 5.12
1444 2187 3.526534 CTTTGAAGCCTAGCACCTAGAC 58.473 50.000 0.00 0.00 36.26 2.59
1460 2441 6.757947 CAGAAAAGTGAATTGAAAGGCTTTGA 59.242 34.615 18.79 6.02 0.00 2.69
1473 2933 6.205658 GTGACTAAAGGCTCAGAAAAGTGAAT 59.794 38.462 3.31 0.00 0.00 2.57
1483 2943 4.081972 TGCTTCTAGTGACTAAAGGCTCAG 60.082 45.833 1.76 0.00 0.00 3.35
1489 2965 5.392767 TGGTCTGCTTCTAGTGACTAAAG 57.607 43.478 0.00 2.56 0.00 1.85
1513 2989 2.249844 TTGGTTCCACTCTTTCGTCC 57.750 50.000 0.00 0.00 0.00 4.79
1526 3002 2.025898 TGGTCCGGTTTCTTTTGGTTC 58.974 47.619 0.00 0.00 0.00 3.62
1553 4008 0.800012 GGCGTTCTCCGTTTGCATTA 59.200 50.000 0.00 0.00 39.32 1.90
1595 5141 3.934457 TGTTCGAGTTAGACATGCTCA 57.066 42.857 0.00 0.00 0.00 4.26
1605 5151 7.858879 GCTTTTGGTATTTTCTTGTTCGAGTTA 59.141 33.333 0.00 0.00 0.00 2.24
1617 7974 4.870363 TGAGCAGTGCTTTTGGTATTTTC 58.130 39.130 20.80 2.20 39.88 2.29
1653 8068 4.516321 TCGTTATTGCTCAATGGATCATGG 59.484 41.667 5.43 0.00 32.50 3.66
1670 8352 1.808343 GGACGCCAAAAAGGTCGTTAT 59.192 47.619 0.00 0.00 45.59 1.89
1678 8360 6.040247 GGGAAAAATATAGGACGCCAAAAAG 58.960 40.000 0.00 0.00 0.00 2.27
1679 8361 5.393243 CGGGAAAAATATAGGACGCCAAAAA 60.393 40.000 0.00 0.00 0.00 1.94
1680 8362 4.096682 CGGGAAAAATATAGGACGCCAAAA 59.903 41.667 0.00 0.00 0.00 2.44
1681 8363 3.628487 CGGGAAAAATATAGGACGCCAAA 59.372 43.478 0.00 0.00 0.00 3.28
1682 8364 3.118334 TCGGGAAAAATATAGGACGCCAA 60.118 43.478 0.00 0.00 0.00 4.52
1684 8366 3.116079 TCGGGAAAAATATAGGACGCC 57.884 47.619 0.00 0.00 0.00 5.68
1685 8367 5.295045 TCTTTTCGGGAAAAATATAGGACGC 59.705 40.000 7.86 0.00 39.49 5.19
1687 8369 7.338703 ACCTTCTTTTCGGGAAAAATATAGGAC 59.661 37.037 19.24 0.00 39.49 3.85
1689 8371 7.640597 ACCTTCTTTTCGGGAAAAATATAGG 57.359 36.000 7.86 12.15 39.49 2.57
1693 8375 7.255906 GGGTAAACCTTCTTTTCGGGAAAAATA 60.256 37.037 7.86 0.00 36.73 1.40
1699 8381 2.224843 GGGGTAAACCTTCTTTTCGGGA 60.225 50.000 0.00 0.00 40.03 5.14
1700 8382 2.165167 GGGGTAAACCTTCTTTTCGGG 58.835 52.381 0.00 0.00 40.03 5.14
1701 8383 2.817844 CAGGGGTAAACCTTCTTTTCGG 59.182 50.000 0.00 0.00 39.34 4.30
1702 8384 2.817844 CCAGGGGTAAACCTTCTTTTCG 59.182 50.000 0.00 0.00 39.34 3.46
1703 8385 3.825014 GACCAGGGGTAAACCTTCTTTTC 59.175 47.826 0.00 0.00 39.34 2.29
1705 8387 3.061369 AGACCAGGGGTAAACCTTCTTT 58.939 45.455 0.00 0.00 39.34 2.52
1706 8388 2.643304 GAGACCAGGGGTAAACCTTCTT 59.357 50.000 0.00 0.00 39.34 2.52
1707 8389 2.267192 GAGACCAGGGGTAAACCTTCT 58.733 52.381 0.00 0.00 39.34 2.85
1709 8391 1.369403 GGAGACCAGGGGTAAACCTT 58.631 55.000 0.00 0.00 39.34 3.50
1711 8393 1.600638 CGGAGACCAGGGGTAAACC 59.399 63.158 0.00 0.00 35.25 3.27
1712 8394 1.078637 GCGGAGACCAGGGGTAAAC 60.079 63.158 0.00 0.00 35.25 2.01
1713 8395 0.912487 ATGCGGAGACCAGGGGTAAA 60.912 55.000 0.00 0.00 35.25 2.01
1714 8396 1.306654 ATGCGGAGACCAGGGGTAA 60.307 57.895 0.00 0.00 35.25 2.85
1717 8399 2.196997 TTTGATGCGGAGACCAGGGG 62.197 60.000 0.00 0.00 0.00 4.79
1721 8403 4.277239 CGTTTGATGCGGAGACCA 57.723 55.556 0.00 0.00 0.00 4.02
1728 8410 1.725625 GTGTGCACCGTTTGATGCG 60.726 57.895 15.69 0.00 45.13 4.73
1739 8421 9.616634 CATTATATAAAAGATGGATGTGTGCAC 57.383 33.333 10.75 10.75 0.00 4.57
2026 9969 1.203001 TGGGGGCAAACAAAGTCTAGG 60.203 52.381 0.00 0.00 0.00 3.02
2041 9985 0.254747 TCGAGCCATTTAGTTGGGGG 59.745 55.000 0.00 0.00 37.24 5.40
2166 10130 2.183555 GTACGAGCCGTTCCCCAG 59.816 66.667 5.57 0.00 41.54 4.45
2195 10159 3.052036 GCTGATGAAGAAGAGCGATCTC 58.948 50.000 2.43 0.00 39.65 2.75
2234 10198 2.943034 GCGTCGGCGTACTCGAAG 60.943 66.667 12.58 13.68 38.42 3.79
2280 10244 2.491621 GCATTTCAGGAAGGCGGC 59.508 61.111 0.00 0.00 35.12 6.53
2302 10266 2.308275 AGGTAGGTCCTGTAAGAGTCGT 59.692 50.000 0.00 0.00 46.19 4.34
2324 10288 0.392461 AAACACGCAGTCACACCTGT 60.392 50.000 0.00 0.00 41.61 4.00
2335 10299 6.655848 GGGGTAATATATATGGAAAACACGCA 59.344 38.462 0.00 0.00 0.00 5.24
2368 10332 7.959733 TGTATTAACTGTCGCTGATTTAGTTG 58.040 34.615 0.00 0.00 33.93 3.16
2412 10376 7.553760 TGTGCAATACTTATGACACATCAAGAT 59.446 33.333 0.00 0.00 38.69 2.40
2413 10377 6.878389 TGTGCAATACTTATGACACATCAAGA 59.122 34.615 0.00 0.00 38.69 3.02
2414 10378 7.075674 TGTGCAATACTTATGACACATCAAG 57.924 36.000 0.00 0.00 38.69 3.02
2415 10379 7.628769 ATGTGCAATACTTATGACACATCAA 57.371 32.000 9.84 0.00 39.26 2.57
2418 10382 8.962884 TTAGATGTGCAATACTTATGACACAT 57.037 30.769 13.39 13.39 42.56 3.21
2419 10383 8.785329 TTTAGATGTGCAATACTTATGACACA 57.215 30.769 0.00 0.00 38.34 3.72
2420 10384 9.869844 GATTTAGATGTGCAATACTTATGACAC 57.130 33.333 0.00 0.00 0.00 3.67
2421 10385 9.056005 GGATTTAGATGTGCAATACTTATGACA 57.944 33.333 0.00 0.00 0.00 3.58
2450 10414 9.476202 ACGAATCTCGATGTAAAATCAATGATA 57.524 29.630 2.59 0.00 43.74 2.15
2451 10415 8.370493 ACGAATCTCGATGTAAAATCAATGAT 57.630 30.769 2.59 0.00 43.74 2.45
2452 10416 7.770801 ACGAATCTCGATGTAAAATCAATGA 57.229 32.000 2.59 0.00 43.74 2.57
2453 10417 9.521179 CATACGAATCTCGATGTAAAATCAATG 57.479 33.333 2.59 0.00 43.74 2.82
2454 10418 8.712363 CCATACGAATCTCGATGTAAAATCAAT 58.288 33.333 2.59 0.00 43.74 2.57
2455 10419 7.923878 TCCATACGAATCTCGATGTAAAATCAA 59.076 33.333 2.59 0.00 43.74 2.57
2456 10420 7.430441 TCCATACGAATCTCGATGTAAAATCA 58.570 34.615 2.59 0.00 43.74 2.57
2457 10421 7.869016 TCCATACGAATCTCGATGTAAAATC 57.131 36.000 2.59 0.00 43.74 2.17
2459 10423 9.923143 AATATCCATACGAATCTCGATGTAAAA 57.077 29.630 2.59 0.00 43.74 1.52
2460 10424 9.923143 AAATATCCATACGAATCTCGATGTAAA 57.077 29.630 2.59 0.00 43.74 2.01
2461 10425 9.923143 AAAATATCCATACGAATCTCGATGTAA 57.077 29.630 2.59 0.00 43.74 2.41
2462 10426 9.923143 AAAAATATCCATACGAATCTCGATGTA 57.077 29.630 2.59 0.00 43.74 2.29
2463 10427 8.833231 AAAAATATCCATACGAATCTCGATGT 57.167 30.769 2.59 0.00 43.74 3.06
2488 10452 6.734137 ACAACGAGTGAATCAAGCATAAAAA 58.266 32.000 0.00 0.00 0.00 1.94
2489 10453 6.312399 ACAACGAGTGAATCAAGCATAAAA 57.688 33.333 0.00 0.00 0.00 1.52
2490 10454 5.940192 ACAACGAGTGAATCAAGCATAAA 57.060 34.783 0.00 0.00 0.00 1.40
2504 10468 3.927142 GCTCTAGTTATTGCACAACGAGT 59.073 43.478 15.58 0.00 32.44 4.18
2505 10469 3.926527 TGCTCTAGTTATTGCACAACGAG 59.073 43.478 11.91 11.91 32.00 4.18
2506 10470 3.920446 TGCTCTAGTTATTGCACAACGA 58.080 40.909 0.00 0.18 0.00 3.85
2528 10492 3.638627 TGTGTCTAGGGCACATCTAGATG 59.361 47.826 27.63 27.63 43.25 2.90
2529 10493 3.639094 GTGTGTCTAGGGCACATCTAGAT 59.361 47.826 18.92 0.00 46.66 1.98
2530 10494 3.024547 GTGTGTCTAGGGCACATCTAGA 58.975 50.000 18.92 0.00 46.66 2.43
2531 10495 2.101582 GGTGTGTCTAGGGCACATCTAG 59.898 54.545 18.92 0.00 46.66 2.43
2532 10496 2.108168 GGTGTGTCTAGGGCACATCTA 58.892 52.381 18.92 0.21 46.66 1.98
2533 10497 0.905357 GGTGTGTCTAGGGCACATCT 59.095 55.000 18.92 0.00 46.66 2.90
2534 10498 0.905357 AGGTGTGTCTAGGGCACATC 59.095 55.000 18.92 18.43 46.66 3.06
2535 10499 1.362224 AAGGTGTGTCTAGGGCACAT 58.638 50.000 18.92 8.37 46.66 3.21
2536 10500 2.018355 TAAGGTGTGTCTAGGGCACA 57.982 50.000 14.22 14.22 43.60 4.57
2537 10501 3.629142 ATTAAGGTGTGTCTAGGGCAC 57.371 47.619 10.20 10.20 37.37 5.01
2538 10502 3.131577 CGTATTAAGGTGTGTCTAGGGCA 59.868 47.826 0.00 0.00 0.00 5.36
2539 10503 3.492137 CCGTATTAAGGTGTGTCTAGGGC 60.492 52.174 0.00 0.00 0.00 5.19
2540 10504 3.703052 ACCGTATTAAGGTGTGTCTAGGG 59.297 47.826 0.09 0.00 41.10 3.53
2541 10505 4.996788 ACCGTATTAAGGTGTGTCTAGG 57.003 45.455 0.09 0.00 41.10 3.02
2542 10506 6.392354 TCAAACCGTATTAAGGTGTGTCTAG 58.608 40.000 15.83 0.00 45.10 2.43
2543 10507 6.209192 TCTCAAACCGTATTAAGGTGTGTCTA 59.791 38.462 15.83 3.77 45.10 2.59
2544 10508 5.011329 TCTCAAACCGTATTAAGGTGTGTCT 59.989 40.000 15.83 0.00 45.10 3.41
2545 10509 5.232463 TCTCAAACCGTATTAAGGTGTGTC 58.768 41.667 15.83 0.00 45.10 3.67
2546 10510 5.011329 TCTCTCAAACCGTATTAAGGTGTGT 59.989 40.000 15.83 0.00 45.10 3.72
2547 10511 5.475719 TCTCTCAAACCGTATTAAGGTGTG 58.524 41.667 11.55 11.55 45.99 3.82
2548 10512 5.721232 CTCTCTCAAACCGTATTAAGGTGT 58.279 41.667 1.85 0.00 41.95 4.16
2549 10513 4.567159 GCTCTCTCAAACCGTATTAAGGTG 59.433 45.833 1.85 0.00 41.95 4.00
2550 10514 4.466726 AGCTCTCTCAAACCGTATTAAGGT 59.533 41.667 0.00 0.00 45.29 3.50
2551 10515 5.012328 AGCTCTCTCAAACCGTATTAAGG 57.988 43.478 0.00 0.00 0.00 2.69
2552 10516 5.230306 CGAAGCTCTCTCAAACCGTATTAAG 59.770 44.000 0.00 0.00 0.00 1.85
2553 10517 5.100259 CGAAGCTCTCTCAAACCGTATTAA 58.900 41.667 0.00 0.00 0.00 1.40
2554 10518 4.157289 ACGAAGCTCTCTCAAACCGTATTA 59.843 41.667 0.00 0.00 0.00 0.98
2555 10519 3.056749 ACGAAGCTCTCTCAAACCGTATT 60.057 43.478 0.00 0.00 0.00 1.89
2556 10520 2.492484 ACGAAGCTCTCTCAAACCGTAT 59.508 45.455 0.00 0.00 0.00 3.06
2557 10521 1.884579 ACGAAGCTCTCTCAAACCGTA 59.115 47.619 0.00 0.00 0.00 4.02
2558 10522 0.674534 ACGAAGCTCTCTCAAACCGT 59.325 50.000 0.00 0.00 0.00 4.83
2559 10523 1.063806 CACGAAGCTCTCTCAAACCG 58.936 55.000 0.00 0.00 0.00 4.44
2560 10524 1.433534 CCACGAAGCTCTCTCAAACC 58.566 55.000 0.00 0.00 0.00 3.27
2561 10525 1.000955 TCCCACGAAGCTCTCTCAAAC 59.999 52.381 0.00 0.00 0.00 2.93
2562 10526 1.338107 TCCCACGAAGCTCTCTCAAA 58.662 50.000 0.00 0.00 0.00 2.69
2563 10527 1.000955 GTTCCCACGAAGCTCTCTCAA 59.999 52.381 0.00 0.00 0.00 3.02
2564 10528 0.603569 GTTCCCACGAAGCTCTCTCA 59.396 55.000 0.00 0.00 0.00 3.27
2565 10529 0.108567 GGTTCCCACGAAGCTCTCTC 60.109 60.000 0.00 0.00 42.15 3.20
2566 10530 1.976112 GGTTCCCACGAAGCTCTCT 59.024 57.895 0.00 0.00 42.15 3.10
2567 10531 4.600207 GGTTCCCACGAAGCTCTC 57.400 61.111 0.00 0.00 42.15 3.20
2571 10535 0.037975 TTACGAGGTTCCCACGAAGC 60.038 55.000 7.10 0.00 45.09 3.86
2572 10536 2.094390 TGATTACGAGGTTCCCACGAAG 60.094 50.000 7.10 0.00 39.84 3.79
2573 10537 1.894466 TGATTACGAGGTTCCCACGAA 59.106 47.619 7.10 0.00 39.84 3.85
2574 10538 1.548081 TGATTACGAGGTTCCCACGA 58.452 50.000 7.10 0.00 39.84 4.35
2575 10539 2.268298 CTTGATTACGAGGTTCCCACG 58.732 52.381 0.00 0.00 42.89 4.94
2576 10540 2.235402 TCCTTGATTACGAGGTTCCCAC 59.765 50.000 0.00 0.00 45.45 4.61
2577 10541 2.235402 GTCCTTGATTACGAGGTTCCCA 59.765 50.000 0.00 0.00 45.45 4.37
2578 10542 2.737679 CGTCCTTGATTACGAGGTTCCC 60.738 54.545 0.00 0.00 45.45 3.97
2579 10543 2.094338 ACGTCCTTGATTACGAGGTTCC 60.094 50.000 1.45 0.00 45.45 3.62
2594 10558 1.134175 CCTGCAACAAAACAACGTCCT 59.866 47.619 0.00 0.00 0.00 3.85
2718 10682 1.446966 GAAGCAGTGGAGCTCGTCC 60.447 63.158 7.83 0.00 45.89 4.79
2762 10726 3.732471 CGAGGCTAGCAAAGTGTAGAGTC 60.732 52.174 18.24 0.00 0.00 3.36
2805 10769 2.202919 TGCATGCCGTCCAGATCG 60.203 61.111 16.68 0.00 0.00 3.69
2880 10844 1.603678 GGTGTTGCTGACATGCCTTTG 60.604 52.381 0.00 0.00 41.10 2.77
2907 10888 2.449525 CCGACACGTTACCGCATGG 61.450 63.158 0.00 0.00 42.84 3.66
2928 10909 9.666163 CGTAACGACACAGTACTAAAATAAATG 57.334 33.333 0.00 0.00 0.00 2.32
3021 11002 3.297620 GGTGTTGCACAGGCCCAG 61.298 66.667 0.00 0.00 40.13 4.45
3141 11122 3.122323 GCGGACGAAATTGCCGGA 61.122 61.111 5.05 0.00 44.92 5.14
3149 11130 1.738830 GTTGATCGGGCGGACGAAA 60.739 57.895 0.00 0.00 46.92 3.46
3252 11234 5.012239 ACACCACTACTTATTCCGTAGTCA 58.988 41.667 0.00 0.00 44.10 3.41
3327 11309 0.890683 CCAATCAAACTGCAGACCCC 59.109 55.000 23.35 0.00 0.00 4.95
3335 11317 3.091633 ACCCATCTCCCAATCAAACTG 57.908 47.619 0.00 0.00 0.00 3.16
3401 11383 0.887387 ATAACAACAAGCACGCCGGT 60.887 50.000 1.90 0.00 0.00 5.28
3519 11509 2.749621 AGTCAAATTGCCCGTTGATCTC 59.250 45.455 0.00 0.00 36.23 2.75
3523 11513 4.520874 TCAAATAGTCAAATTGCCCGTTGA 59.479 37.500 0.00 0.00 0.00 3.18
3593 11586 1.081892 TCGTAGAGGAGTCGTTTCGG 58.918 55.000 0.00 0.00 0.00 4.30
3611 11604 3.712881 GTGTTGCCACGACCGCTC 61.713 66.667 0.00 0.00 0.00 5.03
3613 11606 3.712881 GAGTGTTGCCACGACCGC 61.713 66.667 0.00 0.00 46.56 5.68
3618 11611 1.278637 GAAACCGAGTGTTGCCACG 59.721 57.895 0.00 0.00 46.56 4.94
3627 11620 2.593956 GCCCCTCTGGAAACCGAGT 61.594 63.158 0.00 0.00 35.39 4.18
3649 11642 1.359130 AGGAGGGAACAGATTTTGGGG 59.641 52.381 0.00 0.00 0.00 4.96
3650 11643 2.827921 CAAGGAGGGAACAGATTTTGGG 59.172 50.000 0.00 0.00 0.00 4.12
3660 11653 6.663523 TCCAGATTTAAATTCAAGGAGGGAAC 59.336 38.462 1.43 0.00 0.00 3.62
3662 11655 6.011628 ACTCCAGATTTAAATTCAAGGAGGGA 60.012 38.462 25.91 14.72 44.30 4.20
3683 11676 7.539710 GGTGGTTGAAATTAATTACGAAACTCC 59.460 37.037 0.01 4.58 0.00 3.85
3704 11697 4.102054 CCCGACAGTTATAATAAGGGTGGT 59.898 45.833 0.00 0.00 33.22 4.16
3707 11700 3.072038 GCCCCGACAGTTATAATAAGGGT 59.928 47.826 11.11 0.00 35.98 4.34
3709 11702 3.558533 GGGCCCCGACAGTTATAATAAGG 60.559 52.174 12.23 0.00 0.00 2.69
3710 11703 3.071892 TGGGCCCCGACAGTTATAATAAG 59.928 47.826 22.27 0.00 0.00 1.73
3711 11704 3.047115 TGGGCCCCGACAGTTATAATAA 58.953 45.455 22.27 0.00 0.00 1.40
3712 11705 2.369532 GTGGGCCCCGACAGTTATAATA 59.630 50.000 22.27 0.00 0.00 0.98
3713 11706 1.142262 GTGGGCCCCGACAGTTATAAT 59.858 52.381 22.27 0.00 0.00 1.28
3714 11707 0.542805 GTGGGCCCCGACAGTTATAA 59.457 55.000 22.27 0.00 0.00 0.98
3715 11708 0.325860 AGTGGGCCCCGACAGTTATA 60.326 55.000 22.27 0.00 0.00 0.98
3716 11709 0.325860 TAGTGGGCCCCGACAGTTAT 60.326 55.000 22.27 0.00 0.00 1.89
3717 11710 0.544833 TTAGTGGGCCCCGACAGTTA 60.545 55.000 22.27 0.00 0.00 2.24
3718 11711 1.205460 ATTAGTGGGCCCCGACAGTT 61.205 55.000 22.27 0.00 0.00 3.16
3719 11712 1.205460 AATTAGTGGGCCCCGACAGT 61.205 55.000 22.27 5.76 0.00 3.55
3720 11713 0.834612 TAATTAGTGGGCCCCGACAG 59.165 55.000 22.27 0.00 0.00 3.51
3721 11714 1.287217 TTAATTAGTGGGCCCCGACA 58.713 50.000 22.27 0.24 0.00 4.35
3722 11715 2.651382 ATTAATTAGTGGGCCCCGAC 57.349 50.000 22.27 12.47 0.00 4.79
3723 11716 3.047115 TGTATTAATTAGTGGGCCCCGA 58.953 45.455 22.27 3.85 0.00 5.14
3724 11717 3.143728 GTGTATTAATTAGTGGGCCCCG 58.856 50.000 22.27 0.00 0.00 5.73
3725 11718 3.887110 GTGTGTATTAATTAGTGGGCCCC 59.113 47.826 22.27 11.17 0.00 5.80
3726 11719 3.887110 GGTGTGTATTAATTAGTGGGCCC 59.113 47.826 17.59 17.59 0.00 5.80
3727 11720 3.887110 GGGTGTGTATTAATTAGTGGGCC 59.113 47.826 0.00 0.00 0.00 5.80
3728 11721 3.887110 GGGGTGTGTATTAATTAGTGGGC 59.113 47.826 0.00 0.00 0.00 5.36
3729 11722 5.382664 AGGGGTGTGTATTAATTAGTGGG 57.617 43.478 0.00 0.00 0.00 4.61
3746 12074 3.245264 CCTCCACAGTTAAATCAAGGGGT 60.245 47.826 0.00 0.00 0.00 4.95
3758 12086 8.159229 AGAAGTAAATATTACCCTCCACAGTT 57.841 34.615 0.00 0.00 0.00 3.16
3760 12088 7.792032 TGAGAAGTAAATATTACCCTCCACAG 58.208 38.462 13.17 0.00 0.00 3.66
3761 12089 7.402071 ACTGAGAAGTAAATATTACCCTCCACA 59.598 37.037 13.17 7.13 0.00 4.17
3762 12090 7.793036 ACTGAGAAGTAAATATTACCCTCCAC 58.207 38.462 13.17 4.39 0.00 4.02
3763 12091 7.989947 ACTGAGAAGTAAATATTACCCTCCA 57.010 36.000 13.17 5.34 0.00 3.86
3764 12092 8.366401 GGTACTGAGAAGTAAATATTACCCTCC 58.634 40.741 13.17 0.00 0.00 4.30
3766 12094 8.260099 GGGTACTGAGAAGTAAATATTACCCT 57.740 38.462 5.85 0.00 41.98 4.34
3767 12095 8.260099 AGGGTACTGAGAAGTAAATATTACCC 57.740 38.462 5.04 5.04 44.49 3.69
3768 12096 9.543783 CAAGGGTACTGAGAAGTAAATATTACC 57.456 37.037 0.00 0.00 0.00 2.85
3811 12262 2.134287 TGGACGGGGCTAGAGATGC 61.134 63.158 0.00 0.00 0.00 3.91
3812 12263 1.043116 TGTGGACGGGGCTAGAGATG 61.043 60.000 0.00 0.00 0.00 2.90
3813 12264 0.757188 CTGTGGACGGGGCTAGAGAT 60.757 60.000 0.00 0.00 0.00 2.75
3814 12265 1.379977 CTGTGGACGGGGCTAGAGA 60.380 63.158 0.00 0.00 0.00 3.10
3815 12266 2.427245 CCTGTGGACGGGGCTAGAG 61.427 68.421 0.00 0.00 38.76 2.43
3816 12267 2.363795 CCTGTGGACGGGGCTAGA 60.364 66.667 0.00 0.00 38.76 2.43
3817 12268 1.961180 CTTCCTGTGGACGGGGCTAG 61.961 65.000 4.77 0.00 42.72 3.42
3818 12269 1.987855 CTTCCTGTGGACGGGGCTA 60.988 63.158 4.77 0.00 42.72 3.93
3819 12270 3.322466 CTTCCTGTGGACGGGGCT 61.322 66.667 4.77 0.00 42.72 5.19
3820 12271 4.410400 CCTTCCTGTGGACGGGGC 62.410 72.222 4.77 0.00 42.72 5.80
3821 12272 4.410400 GCCTTCCTGTGGACGGGG 62.410 72.222 10.50 3.90 40.91 5.73
3822 12273 4.410400 GGCCTTCCTGTGGACGGG 62.410 72.222 10.50 0.00 40.91 5.28
3823 12274 3.316573 GAGGCCTTCCTGTGGACGG 62.317 68.421 6.77 4.93 44.46 4.79
3824 12275 2.266055 GAGGCCTTCCTGTGGACG 59.734 66.667 6.77 0.00 44.46 4.79
3825 12276 2.671682 GGAGGCCTTCCTGTGGAC 59.328 66.667 6.77 0.00 44.46 4.02
3826 12277 2.610859 GGGAGGCCTTCCTGTGGA 60.611 66.667 24.53 0.00 44.46 4.02
3827 12278 3.732849 GGGGAGGCCTTCCTGTGG 61.733 72.222 30.10 0.00 44.46 4.17
3828 12279 2.935481 TGGGGAGGCCTTCCTGTG 60.935 66.667 30.10 0.00 44.46 3.66
3829 12280 2.612115 CTGGGGAGGCCTTCCTGT 60.612 66.667 30.10 0.00 44.46 4.00
3830 12281 3.415087 CCTGGGGAGGCCTTCCTG 61.415 72.222 30.10 23.65 44.46 3.86
3838 12289 4.764143 AAAAATCGCCTGGGGAGG 57.236 55.556 18.77 0.00 0.00 4.30
3871 12322 3.656045 CGCGACTGGGCCGTTTTT 61.656 61.111 0.00 0.00 0.00 1.94
3880 12331 4.379243 ACCTGAAGGCGCGACTGG 62.379 66.667 19.28 16.65 39.32 4.00
3881 12332 3.114616 CACCTGAAGGCGCGACTG 61.115 66.667 19.28 5.00 39.32 3.51
3882 12333 3.575351 GACACCTGAAGGCGCGACT 62.575 63.158 9.84 9.84 39.32 4.18
3883 12334 3.112709 GACACCTGAAGGCGCGAC 61.113 66.667 12.10 7.34 39.32 5.19
3884 12335 4.373116 GGACACCTGAAGGCGCGA 62.373 66.667 12.10 0.00 39.32 5.87
3886 12337 3.665675 ATCGGACACCTGAAGGCGC 62.666 63.158 0.00 0.00 39.32 6.53
3887 12338 0.673644 AAATCGGACACCTGAAGGCG 60.674 55.000 0.00 0.00 39.32 5.52
3888 12339 1.468914 GAAAATCGGACACCTGAAGGC 59.531 52.381 0.00 0.00 39.32 4.35
3889 12340 1.732259 CGAAAATCGGACACCTGAAGG 59.268 52.381 0.00 0.00 36.00 3.46
3890 12341 1.128692 GCGAAAATCGGACACCTGAAG 59.871 52.381 1.64 0.00 40.84 3.02
3891 12342 1.153353 GCGAAAATCGGACACCTGAA 58.847 50.000 1.64 0.00 40.84 3.02
3892 12343 0.672401 GGCGAAAATCGGACACCTGA 60.672 55.000 1.64 0.00 40.84 3.86
3893 12344 1.794222 GGCGAAAATCGGACACCTG 59.206 57.895 1.64 0.00 40.84 4.00
3894 12345 1.740296 CGGCGAAAATCGGACACCT 60.740 57.895 0.00 0.00 40.84 4.00
3895 12346 2.782615 CGGCGAAAATCGGACACC 59.217 61.111 0.00 0.00 40.84 4.16
3901 12352 2.244651 CCTAGGCCGGCGAAAATCG 61.245 63.158 22.54 3.93 43.89 3.34
3902 12353 2.543802 GCCTAGGCCGGCGAAAATC 61.544 63.158 24.19 4.96 40.79 2.17
3903 12354 2.516225 GCCTAGGCCGGCGAAAAT 60.516 61.111 24.19 6.15 40.79 1.82
3913 12364 3.188011 GCTGTTTTCGGCCTAGGC 58.812 61.111 26.55 26.55 45.68 3.93
3979 12430 3.292159 AAAACAGTTCGCCCCGGC 61.292 61.111 0.00 0.00 37.85 6.13
3980 12431 2.642700 CAAAACAGTTCGCCCCGG 59.357 61.111 0.00 0.00 0.00 5.73
3981 12432 2.642700 CCAAAACAGTTCGCCCCG 59.357 61.111 0.00 0.00 0.00 5.73
3982 12433 2.338620 GCCAAAACAGTTCGCCCC 59.661 61.111 0.00 0.00 0.00 5.80
3983 12434 2.050442 CGCCAAAACAGTTCGCCC 60.050 61.111 0.00 0.00 0.00 6.13
3984 12435 2.729491 GCGCCAAAACAGTTCGCC 60.729 61.111 0.00 0.00 39.91 5.54
3985 12436 2.975167 TTCGCGCCAAAACAGTTCGC 62.975 55.000 0.00 6.96 42.05 4.70
3986 12437 0.590230 TTTCGCGCCAAAACAGTTCG 60.590 50.000 0.00 0.00 0.00 3.95
3987 12438 0.843872 GTTTCGCGCCAAAACAGTTC 59.156 50.000 21.65 0.00 36.76 3.01
3988 12439 0.171455 TGTTTCGCGCCAAAACAGTT 59.829 45.000 24.07 0.00 40.64 3.16
3989 12440 1.803943 TGTTTCGCGCCAAAACAGT 59.196 47.368 24.07 0.00 40.64 3.55
3990 12441 4.700037 TGTTTCGCGCCAAAACAG 57.300 50.000 24.07 1.14 40.64 3.16
3991 12442 1.587613 GCTGTTTCGCGCCAAAACA 60.588 52.632 25.37 25.37 42.63 2.83
3992 12443 2.300066 GGCTGTTTCGCGCCAAAAC 61.300 57.895 20.42 20.42 45.59 2.43
3993 12444 2.026879 GGCTGTTTCGCGCCAAAA 59.973 55.556 0.56 0.00 45.59 2.44
3997 12448 3.737172 ATGTGGCTGTTTCGCGCC 61.737 61.111 0.00 0.00 46.46 6.53
3998 12449 2.502510 CATGTGGCTGTTTCGCGC 60.503 61.111 0.00 0.00 0.00 6.86
3999 12450 2.502510 GCATGTGGCTGTTTCGCG 60.503 61.111 0.00 0.00 40.25 5.87
4000 12451 2.126346 GGCATGTGGCTGTTTCGC 60.126 61.111 0.00 0.00 44.01 4.70
4001 12452 2.568090 GGGCATGTGGCTGTTTCG 59.432 61.111 6.52 0.00 44.01 3.46
4002 12453 2.568090 CGGGCATGTGGCTGTTTC 59.432 61.111 7.19 0.00 44.01 2.78
4030 12481 4.719369 AAGACGAGGCGCCGTGTC 62.719 66.667 33.45 33.45 43.49 3.67
4031 12482 4.719369 GAAGACGAGGCGCCGTGT 62.719 66.667 23.83 23.83 43.49 4.49
4037 12488 3.702048 TTGGGGGAAGACGAGGCG 61.702 66.667 0.00 0.00 0.00 5.52
4038 12489 2.046217 GTTGGGGGAAGACGAGGC 60.046 66.667 0.00 0.00 0.00 4.70
4039 12490 2.264794 CGTTGGGGGAAGACGAGG 59.735 66.667 0.00 0.00 38.99 4.63
4040 12491 2.264794 CCGTTGGGGGAAGACGAG 59.735 66.667 0.00 0.00 38.99 4.18
4041 12492 4.011517 GCCGTTGGGGGAAGACGA 62.012 66.667 0.00 0.00 38.99 4.20
4043 12494 3.623703 GAGGCCGTTGGGGGAAGAC 62.624 68.421 0.00 0.00 35.78 3.01
4044 12495 3.327404 GAGGCCGTTGGGGGAAGA 61.327 66.667 0.00 0.00 35.78 2.87
4045 12496 4.778143 CGAGGCCGTTGGGGGAAG 62.778 72.222 0.00 0.00 35.78 3.46
4049 12500 4.653888 AAACCGAGGCCGTTGGGG 62.654 66.667 14.34 7.34 33.08 4.96
4050 12501 3.053896 GAAACCGAGGCCGTTGGG 61.054 66.667 14.34 8.99 33.08 4.12
4051 12502 3.053896 GGAAACCGAGGCCGTTGG 61.054 66.667 9.14 9.14 35.43 3.77
4066 12517 1.453745 GCCATTGATTCCCTGCGGA 60.454 57.895 0.00 0.00 35.88 5.54
4067 12518 1.321805 TTGCCATTGATTCCCTGCGG 61.322 55.000 0.00 0.00 0.00 5.69
4068 12519 0.101759 CTTGCCATTGATTCCCTGCG 59.898 55.000 0.00 0.00 0.00 5.18
4069 12520 0.462789 CCTTGCCATTGATTCCCTGC 59.537 55.000 0.00 0.00 0.00 4.85
4070 12521 0.462789 GCCTTGCCATTGATTCCCTG 59.537 55.000 0.00 0.00 0.00 4.45
4071 12522 0.337428 AGCCTTGCCATTGATTCCCT 59.663 50.000 0.00 0.00 0.00 4.20
4072 12523 0.462789 CAGCCTTGCCATTGATTCCC 59.537 55.000 0.00 0.00 0.00 3.97
4073 12524 0.179092 GCAGCCTTGCCATTGATTCC 60.179 55.000 0.00 0.00 44.74 3.01
4074 12525 3.357504 GCAGCCTTGCCATTGATTC 57.642 52.632 0.00 0.00 44.74 2.52
4088 12539 3.064324 AATGGCAAGGTCGGCAGC 61.064 61.111 0.00 0.00 45.56 5.25
4089 12540 1.033746 ATCAATGGCAAGGTCGGCAG 61.034 55.000 0.00 0.00 45.56 4.85
4090 12541 0.611618 AATCAATGGCAAGGTCGGCA 60.612 50.000 0.00 0.00 46.50 5.69
4091 12542 0.101219 GAATCAATGGCAAGGTCGGC 59.899 55.000 0.00 0.00 0.00 5.54
4092 12543 0.740737 GGAATCAATGGCAAGGTCGG 59.259 55.000 0.00 0.00 0.00 4.79
4093 12544 1.672881 GAGGAATCAATGGCAAGGTCG 59.327 52.381 0.00 0.00 0.00 4.79
4094 12545 2.424956 GTGAGGAATCAATGGCAAGGTC 59.575 50.000 0.00 0.00 0.00 3.85
4095 12546 2.450476 GTGAGGAATCAATGGCAAGGT 58.550 47.619 0.00 0.00 0.00 3.50
4096 12547 1.402968 CGTGAGGAATCAATGGCAAGG 59.597 52.381 0.00 0.00 0.00 3.61
4097 12548 2.838386 CGTGAGGAATCAATGGCAAG 57.162 50.000 0.00 0.00 0.00 4.01
4152 12603 4.849329 GTACGCGTGCGAGGGAGG 62.849 72.222 24.59 0.00 42.83 4.30
4153 12604 4.111016 TGTACGCGTGCGAGGGAG 62.111 66.667 24.59 0.00 42.83 4.30
4154 12605 4.409218 GTGTACGCGTGCGAGGGA 62.409 66.667 24.59 0.04 42.83 4.20
4155 12606 4.710695 TGTGTACGCGTGCGAGGG 62.711 66.667 24.59 0.00 42.83 4.30
4156 12607 3.467119 GTGTGTACGCGTGCGAGG 61.467 66.667 24.59 0.00 42.83 4.63
4157 12608 3.812614 CGTGTGTACGCGTGCGAG 61.813 66.667 24.59 9.33 44.11 5.03
4175 12626 3.636313 TATATAGCCGCGCCGCACC 62.636 63.158 22.36 0.00 0.00 5.01
4176 12627 2.126228 TATATAGCCGCGCCGCAC 60.126 61.111 22.36 0.00 0.00 5.34
4177 12628 2.180769 CTATATAGCCGCGCCGCA 59.819 61.111 22.36 9.12 0.00 5.69
4178 12629 3.255379 GCTATATAGCCGCGCCGC 61.255 66.667 22.02 13.06 43.39 6.53
4206 12657 4.624364 TGTGGGCACAGGCGAGTG 62.624 66.667 8.48 8.48 42.47 3.51
4207 12658 4.626081 GTGTGGGCACAGGCGAGT 62.626 66.667 0.00 0.00 44.64 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.