Multiple sequence alignment - TraesCS2A01G406400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G406400 chr2A 100.000 2412 0 0 1 2412 662231889 662234300 0.000000e+00 4455.0
1 TraesCS2A01G406400 chr2A 100.000 475 0 0 1938 2412 662245118 662245592 0.000000e+00 878.0
2 TraesCS2A01G406400 chr2A 99.368 475 3 0 1938 2412 389701967 389701493 0.000000e+00 861.0
3 TraesCS2A01G406400 chr2A 79.479 614 106 17 821 1427 662317500 662318100 3.710000e-113 418.0
4 TraesCS2A01G406400 chr2A 76.142 591 105 17 825 1404 661945218 661945783 6.570000e-71 278.0
5 TraesCS2A01G406400 chr2A 77.126 494 78 23 263 748 661944757 661945223 1.110000e-63 254.0
6 TraesCS2A01G406400 chr2A 76.398 483 92 20 271 750 662316762 662317225 8.620000e-60 241.0
7 TraesCS2A01G406400 chr2A 78.689 183 26 7 1598 1775 591280558 591280732 2.540000e-20 110.0
8 TraesCS2A01G406400 chr2D 93.107 1944 91 18 1 1937 518168521 518170428 0.000000e+00 2808.0
9 TraesCS2A01G406400 chr2D 78.303 613 113 12 821 1427 518184451 518185049 6.290000e-101 377.0
10 TraesCS2A01G406400 chr2D 77.665 591 94 18 825 1404 518074412 518074975 2.310000e-85 326.0
11 TraesCS2A01G406400 chr2D 77.593 482 87 18 271 750 518183866 518184328 3.060000e-69 272.0
12 TraesCS2A01G406400 chr2D 77.149 477 77 20 276 748 518073969 518074417 5.150000e-62 248.0
13 TraesCS2A01G406400 chr2D 81.013 158 16 10 1598 1744 110844153 110844307 1.960000e-21 113.0
14 TraesCS2A01G406400 chr2D 90.476 63 5 1 1601 1662 78503586 78503524 5.530000e-12 82.4
15 TraesCS2A01G406400 chr2B 90.303 1155 50 21 1 1133 610115148 610116262 0.000000e+00 1456.0
16 TraesCS2A01G406400 chr2B 92.365 812 53 7 1131 1937 610116385 610117192 0.000000e+00 1147.0
17 TraesCS2A01G406400 chr2B 99.368 475 3 0 1938 2412 306753777 306754251 0.000000e+00 861.0
18 TraesCS2A01G406400 chr2B 99.368 475 2 1 1938 2412 327860509 327860036 0.000000e+00 859.0
19 TraesCS2A01G406400 chr2B 78.254 607 110 19 821 1421 610277822 610278412 1.050000e-98 370.0
20 TraesCS2A01G406400 chr2B 77.143 595 100 21 825 1411 610021237 610021803 1.800000e-81 313.0
21 TraesCS2A01G406400 chr2B 77.984 486 73 23 269 748 610020785 610021242 8.500000e-70 274.0
22 TraesCS2A01G406400 chr2B 76.091 481 98 12 271 751 610277256 610277719 4.010000e-58 235.0
23 TraesCS2A01G406400 chrUn 99.789 475 1 0 1938 2412 17872057 17872531 0.000000e+00 872.0
24 TraesCS2A01G406400 chrUn 99.368 475 3 0 1938 2412 17880272 17880746 0.000000e+00 861.0
25 TraesCS2A01G406400 chr5B 99.368 475 3 0 1938 2412 27434029 27433555 0.000000e+00 861.0
26 TraesCS2A01G406400 chr4A 99.368 475 3 0 1938 2412 77647329 77647803 0.000000e+00 861.0
27 TraesCS2A01G406400 chr7B 99.368 475 2 1 1938 2412 521395980 521396453 0.000000e+00 859.0
28 TraesCS2A01G406400 chr5D 79.730 148 21 5 1607 1746 336413574 336413428 5.490000e-17 99.0
29 TraesCS2A01G406400 chr1B 79.470 151 21 9 1603 1746 400316493 400316640 5.490000e-17 99.0
30 TraesCS2A01G406400 chr6A 77.841 176 20 10 1618 1780 614017526 614017695 9.180000e-15 91.6
31 TraesCS2A01G406400 chr7A 93.182 44 0 2 1695 1738 564250941 564250981 7.200000e-06 62.1
32 TraesCS2A01G406400 chr3B 100.000 33 0 0 1712 1744 6187272 6187240 7.200000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G406400 chr2A 662231889 662234300 2411 False 4455.0 4455 100.0000 1 2412 1 chr2A.!!$F2 2411
1 TraesCS2A01G406400 chr2A 662316762 662318100 1338 False 329.5 418 77.9385 271 1427 2 chr2A.!!$F5 1156
2 TraesCS2A01G406400 chr2A 661944757 661945783 1026 False 266.0 278 76.6340 263 1404 2 chr2A.!!$F4 1141
3 TraesCS2A01G406400 chr2D 518168521 518170428 1907 False 2808.0 2808 93.1070 1 1937 1 chr2D.!!$F2 1936
4 TraesCS2A01G406400 chr2D 518183866 518185049 1183 False 324.5 377 77.9480 271 1427 2 chr2D.!!$F4 1156
5 TraesCS2A01G406400 chr2D 518073969 518074975 1006 False 287.0 326 77.4070 276 1404 2 chr2D.!!$F3 1128
6 TraesCS2A01G406400 chr2B 610115148 610117192 2044 False 1301.5 1456 91.3340 1 1937 2 chr2B.!!$F3 1936
7 TraesCS2A01G406400 chr2B 610277256 610278412 1156 False 302.5 370 77.1725 271 1421 2 chr2B.!!$F4 1150
8 TraesCS2A01G406400 chr2B 610020785 610021803 1018 False 293.5 313 77.5635 269 1411 2 chr2B.!!$F2 1142

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 458 0.031178 CACTGGCTTGCCTTGTGTTC 59.969 55.0 20.89 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2268 2665 0.030235 TCACGCGATGAATACCGGAG 59.97 55.0 15.93 0.0 33.02 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.813529 CGTGATTCTGGGTCAAAACTC 57.186 47.619 0.00 0.00 0.00 3.01
21 22 3.403038 CGTGATTCTGGGTCAAAACTCT 58.597 45.455 0.00 0.00 0.00 3.24
22 23 3.433615 CGTGATTCTGGGTCAAAACTCTC 59.566 47.826 0.00 0.00 0.00 3.20
23 24 3.433615 GTGATTCTGGGTCAAAACTCTCG 59.566 47.826 0.00 0.00 0.00 4.04
237 243 3.552294 GGTTCTTTCCTCTATTCGCGAAG 59.448 47.826 27.20 14.66 0.00 3.79
253 259 2.872038 GCGAAGGACAAATGAGGTGAGT 60.872 50.000 0.00 0.00 0.00 3.41
286 298 3.602390 TTTGTTTGAACGAGCAGCTAC 57.398 42.857 0.00 0.00 0.00 3.58
302 314 1.069358 GCTACCTTCCTGGGATTCGAG 59.931 57.143 0.00 0.00 41.11 4.04
430 442 0.033504 CAACTCCCTGTACGCACACT 59.966 55.000 0.00 0.00 0.00 3.55
431 443 0.033504 AACTCCCTGTACGCACACTG 59.966 55.000 0.00 0.00 0.00 3.66
432 444 1.079819 CTCCCTGTACGCACACTGG 60.080 63.158 4.20 4.20 37.29 4.00
433 445 2.742372 CCCTGTACGCACACTGGC 60.742 66.667 5.38 0.00 36.48 4.85
435 447 1.301716 CCTGTACGCACACTGGCTT 60.302 57.895 0.00 0.00 31.74 4.35
436 448 1.568612 CCTGTACGCACACTGGCTTG 61.569 60.000 0.00 0.00 31.74 4.01
438 450 2.668212 TACGCACACTGGCTTGCC 60.668 61.111 4.43 4.43 35.14 4.52
440 452 2.674563 TACGCACACTGGCTTGCCTT 62.675 55.000 13.18 0.00 35.14 4.35
441 453 2.337532 GCACACTGGCTTGCCTTG 59.662 61.111 13.18 11.80 32.21 3.61
442 454 2.492773 GCACACTGGCTTGCCTTGT 61.493 57.895 13.18 12.40 32.21 3.16
443 455 1.361271 CACACTGGCTTGCCTTGTG 59.639 57.895 24.53 24.53 35.09 3.33
446 458 0.031178 CACTGGCTTGCCTTGTGTTC 59.969 55.000 20.89 0.00 0.00 3.18
449 461 2.721231 GCTTGCCTTGTGTTCGCA 59.279 55.556 0.00 0.00 0.00 5.10
460 472 1.281899 GTGTTCGCACTAGCCAGATC 58.718 55.000 0.00 0.00 44.38 2.75
667 688 0.243095 GACCTGTTCGAGTACGCCTT 59.757 55.000 0.00 0.00 39.58 4.35
937 1188 1.464608 CACATGACAATGACACCGACC 59.535 52.381 0.00 0.00 37.24 4.79
954 1205 0.180406 ACCAGTTCAACTGCTTCGGT 59.820 50.000 12.49 1.02 44.63 4.69
1026 1277 1.522580 GGGCCTCAACGCTGATCTC 60.523 63.158 0.84 0.00 0.00 2.75
1061 1312 0.329261 TCCCTCTCCGACTCCGTAAA 59.671 55.000 0.00 0.00 0.00 2.01
1062 1313 1.180029 CCCTCTCCGACTCCGTAAAA 58.820 55.000 0.00 0.00 0.00 1.52
1142 1523 3.187700 CTCAAATACTACCTGTCACGGC 58.812 50.000 0.00 0.00 0.00 5.68
1175 1565 4.320494 GGATGTTTCAGTGATGTGTGGTTC 60.320 45.833 0.00 0.00 0.00 3.62
1448 1841 3.053455 CAGACGACCTGACTTGTTTCTC 58.947 50.000 0.00 0.00 45.78 2.87
1565 1959 0.454600 TCGCTCATCCACTCGTTACC 59.545 55.000 0.00 0.00 0.00 2.85
1756 2151 7.722728 TGAGACTTGGTTAAGTAGTCTTAGTCA 59.277 37.037 12.70 6.42 46.79 3.41
1775 2170 8.685838 TTAGTCAACTAAAATTTAGCCACACT 57.314 30.769 12.28 11.04 35.67 3.55
1779 2174 8.780249 GTCAACTAAAATTTAGCCACACTCTAA 58.220 33.333 12.28 0.00 0.00 2.10
1791 2186 4.125703 CCACACTCTAAGGCATGAATCTC 58.874 47.826 0.00 0.00 0.00 2.75
1845 2242 9.085250 CATGAATCTTCGTATAAGATCTCATGG 57.915 37.037 23.94 15.55 41.28 3.66
1915 2312 3.937079 AGCGATCCCGTAAACTTTAAAGG 59.063 43.478 19.14 1.22 38.24 3.11
1946 2343 9.841295 TTATAACAAAGGTATAATGTCAGGACC 57.159 33.333 0.00 0.00 0.00 4.46
1947 2344 5.112129 ACAAAGGTATAATGTCAGGACCC 57.888 43.478 0.00 0.00 0.00 4.46
1948 2345 4.079958 ACAAAGGTATAATGTCAGGACCCC 60.080 45.833 0.00 0.00 0.00 4.95
1949 2346 2.326428 AGGTATAATGTCAGGACCCCG 58.674 52.381 0.00 0.00 0.00 5.73
1950 2347 2.090943 AGGTATAATGTCAGGACCCCGA 60.091 50.000 0.00 0.00 0.00 5.14
1951 2348 2.036862 GGTATAATGTCAGGACCCCGAC 59.963 54.545 4.95 4.95 0.00 4.79
1952 2349 2.176247 ATAATGTCAGGACCCCGACT 57.824 50.000 11.80 0.00 31.80 4.18
1953 2350 1.481871 TAATGTCAGGACCCCGACTC 58.518 55.000 11.80 0.00 31.80 3.36
1954 2351 0.544357 AATGTCAGGACCCCGACTCA 60.544 55.000 11.80 0.00 31.80 3.41
1955 2352 0.972983 ATGTCAGGACCCCGACTCAG 60.973 60.000 11.80 0.00 31.80 3.35
1956 2353 1.606889 GTCAGGACCCCGACTCAGT 60.607 63.158 4.70 0.00 0.00 3.41
1957 2354 0.323178 GTCAGGACCCCGACTCAGTA 60.323 60.000 4.70 0.00 0.00 2.74
1958 2355 0.323178 TCAGGACCCCGACTCAGTAC 60.323 60.000 0.00 0.00 0.00 2.73
1959 2356 1.000107 AGGACCCCGACTCAGTACC 60.000 63.158 0.00 0.00 0.00 3.34
1960 2357 1.304713 GGACCCCGACTCAGTACCA 60.305 63.158 0.00 0.00 0.00 3.25
1961 2358 1.602327 GGACCCCGACTCAGTACCAC 61.602 65.000 0.00 0.00 0.00 4.16
1962 2359 0.896940 GACCCCGACTCAGTACCACA 60.897 60.000 0.00 0.00 0.00 4.17
1963 2360 0.252103 ACCCCGACTCAGTACCACAT 60.252 55.000 0.00 0.00 0.00 3.21
1964 2361 0.460311 CCCCGACTCAGTACCACATC 59.540 60.000 0.00 0.00 0.00 3.06
1965 2362 0.100682 CCCGACTCAGTACCACATCG 59.899 60.000 0.00 0.00 0.00 3.84
1966 2363 1.092348 CCGACTCAGTACCACATCGA 58.908 55.000 8.33 0.00 0.00 3.59
1967 2364 1.676529 CCGACTCAGTACCACATCGAT 59.323 52.381 8.33 0.00 0.00 3.59
1968 2365 2.287069 CCGACTCAGTACCACATCGATC 60.287 54.545 0.00 0.00 0.00 3.69
1969 2366 2.614520 CGACTCAGTACCACATCGATCT 59.385 50.000 0.00 0.00 0.00 2.75
1970 2367 3.808174 CGACTCAGTACCACATCGATCTA 59.192 47.826 0.00 0.00 0.00 1.98
1971 2368 4.084276 CGACTCAGTACCACATCGATCTAG 60.084 50.000 0.00 0.00 0.00 2.43
1972 2369 3.566322 ACTCAGTACCACATCGATCTAGC 59.434 47.826 0.00 0.00 0.00 3.42
1973 2370 3.551846 TCAGTACCACATCGATCTAGCA 58.448 45.455 0.00 0.00 0.00 3.49
1974 2371 4.145052 TCAGTACCACATCGATCTAGCAT 58.855 43.478 0.00 0.00 0.00 3.79
1975 2372 4.022849 TCAGTACCACATCGATCTAGCATG 60.023 45.833 0.00 0.00 0.00 4.06
1976 2373 3.891977 AGTACCACATCGATCTAGCATGT 59.108 43.478 0.00 0.00 0.00 3.21
1977 2374 5.048713 CAGTACCACATCGATCTAGCATGTA 60.049 44.000 0.00 0.00 0.00 2.29
1978 2375 4.937201 ACCACATCGATCTAGCATGTAA 57.063 40.909 0.00 0.00 0.00 2.41
1979 2376 4.621991 ACCACATCGATCTAGCATGTAAC 58.378 43.478 0.00 0.00 0.00 2.50
1980 2377 4.099419 ACCACATCGATCTAGCATGTAACA 59.901 41.667 0.00 0.00 0.00 2.41
1981 2378 4.445718 CCACATCGATCTAGCATGTAACAC 59.554 45.833 0.00 0.00 0.00 3.32
1982 2379 5.043248 CACATCGATCTAGCATGTAACACA 58.957 41.667 0.00 0.00 0.00 3.72
1983 2380 5.693555 CACATCGATCTAGCATGTAACACAT 59.306 40.000 0.00 0.00 39.91 3.21
1984 2381 5.923114 ACATCGATCTAGCATGTAACACATC 59.077 40.000 0.00 0.00 36.53 3.06
1985 2382 5.514274 TCGATCTAGCATGTAACACATCA 57.486 39.130 0.00 0.00 36.53 3.07
1986 2383 6.089249 TCGATCTAGCATGTAACACATCAT 57.911 37.500 0.00 0.00 36.53 2.45
1987 2384 7.214467 TCGATCTAGCATGTAACACATCATA 57.786 36.000 0.00 0.00 36.53 2.15
1988 2385 7.830739 TCGATCTAGCATGTAACACATCATAT 58.169 34.615 0.00 0.00 36.53 1.78
1989 2386 7.970614 TCGATCTAGCATGTAACACATCATATC 59.029 37.037 0.00 0.00 36.53 1.63
1990 2387 7.756722 CGATCTAGCATGTAACACATCATATCA 59.243 37.037 0.00 0.00 36.53 2.15
1991 2388 8.768957 ATCTAGCATGTAACACATCATATCAC 57.231 34.615 0.00 0.00 36.53 3.06
1992 2389 7.955918 TCTAGCATGTAACACATCATATCACT 58.044 34.615 0.00 0.00 36.53 3.41
1993 2390 8.424133 TCTAGCATGTAACACATCATATCACTT 58.576 33.333 0.00 0.00 36.53 3.16
1994 2391 7.870509 AGCATGTAACACATCATATCACTTT 57.129 32.000 0.00 0.00 36.53 2.66
1995 2392 7.700505 AGCATGTAACACATCATATCACTTTG 58.299 34.615 0.00 0.00 36.53 2.77
1996 2393 6.415867 GCATGTAACACATCATATCACTTTGC 59.584 38.462 0.00 0.00 36.53 3.68
1997 2394 6.105657 TGTAACACATCATATCACTTTGCG 57.894 37.500 0.00 0.00 0.00 4.85
1998 2395 4.621068 AACACATCATATCACTTTGCGG 57.379 40.909 0.00 0.00 0.00 5.69
1999 2396 2.355756 ACACATCATATCACTTTGCGGC 59.644 45.455 0.00 0.00 0.00 6.53
2000 2397 1.949525 ACATCATATCACTTTGCGGCC 59.050 47.619 0.00 0.00 0.00 6.13
2001 2398 2.224606 CATCATATCACTTTGCGGCCT 58.775 47.619 0.00 0.00 0.00 5.19
2002 2399 1.953559 TCATATCACTTTGCGGCCTC 58.046 50.000 0.00 0.00 0.00 4.70
2003 2400 1.209261 TCATATCACTTTGCGGCCTCA 59.791 47.619 0.00 0.00 0.00 3.86
2004 2401 1.331756 CATATCACTTTGCGGCCTCAC 59.668 52.381 0.00 0.00 0.00 3.51
2005 2402 0.739462 TATCACTTTGCGGCCTCACG 60.739 55.000 0.00 0.00 0.00 4.35
2013 2410 4.508128 CGGCCTCACGCACGGTAT 62.508 66.667 0.00 0.00 40.31 2.73
2014 2411 2.585247 GGCCTCACGCACGGTATC 60.585 66.667 0.00 0.00 40.31 2.24
2015 2412 2.585247 GCCTCACGCACGGTATCC 60.585 66.667 0.00 0.00 37.47 2.59
2016 2413 2.106332 CCTCACGCACGGTATCCC 59.894 66.667 0.00 0.00 0.00 3.85
2017 2414 2.106332 CTCACGCACGGTATCCCC 59.894 66.667 0.00 0.00 0.00 4.81
2018 2415 2.680707 TCACGCACGGTATCCCCA 60.681 61.111 0.00 0.00 0.00 4.96
2019 2416 2.510691 CACGCACGGTATCCCCAC 60.511 66.667 0.00 0.00 0.00 4.61
2020 2417 4.137872 ACGCACGGTATCCCCACG 62.138 66.667 0.00 0.00 0.00 4.94
2021 2418 4.884257 CGCACGGTATCCCCACGG 62.884 72.222 0.00 0.00 0.00 4.94
2022 2419 4.540735 GCACGGTATCCCCACGGG 62.541 72.222 0.00 0.00 46.11 5.28
2023 2420 3.078836 CACGGTATCCCCACGGGT 61.079 66.667 0.41 0.00 44.74 5.28
2024 2421 3.078836 ACGGTATCCCCACGGGTG 61.079 66.667 0.41 0.00 44.74 4.61
2025 2422 3.078836 CGGTATCCCCACGGGTGT 61.079 66.667 0.41 0.00 44.74 4.16
2026 2423 2.905681 GGTATCCCCACGGGTGTC 59.094 66.667 0.41 0.00 44.74 3.67
2027 2424 2.497770 GTATCCCCACGGGTGTCG 59.502 66.667 0.41 0.00 44.74 4.35
2028 2425 3.463585 TATCCCCACGGGTGTCGC 61.464 66.667 0.41 0.00 44.74 5.19
2032 2429 3.697747 CCCACGGGTGTCGCCTTA 61.698 66.667 1.66 0.00 43.89 2.69
2033 2430 2.433664 CCACGGGTGTCGCCTTAC 60.434 66.667 1.66 0.00 43.89 2.34
2034 2431 2.433664 CACGGGTGTCGCCTTACC 60.434 66.667 1.66 0.00 43.89 2.85
2035 2432 2.602568 ACGGGTGTCGCCTTACCT 60.603 61.111 1.66 0.00 43.89 3.08
2036 2433 2.212110 ACGGGTGTCGCCTTACCTT 61.212 57.895 1.66 0.00 43.89 3.50
2037 2434 1.004200 CGGGTGTCGCCTTACCTTT 60.004 57.895 1.66 0.00 37.15 3.11
2038 2435 1.017701 CGGGTGTCGCCTTACCTTTC 61.018 60.000 1.66 0.00 37.15 2.62
2039 2436 0.675837 GGGTGTCGCCTTACCTTTCC 60.676 60.000 1.66 0.00 37.15 3.13
2040 2437 0.675837 GGTGTCGCCTTACCTTTCCC 60.676 60.000 0.00 0.00 34.11 3.97
2041 2438 0.675837 GTGTCGCCTTACCTTTCCCC 60.676 60.000 0.00 0.00 0.00 4.81
2042 2439 1.449070 GTCGCCTTACCTTTCCCCG 60.449 63.158 0.00 0.00 0.00 5.73
2043 2440 2.124860 CGCCTTACCTTTCCCCGG 60.125 66.667 0.00 0.00 0.00 5.73
2044 2441 2.274432 GCCTTACCTTTCCCCGGG 59.726 66.667 15.80 15.80 0.00 5.73
2045 2442 2.303282 GCCTTACCTTTCCCCGGGA 61.303 63.158 26.32 0.34 0.00 5.14
2046 2443 1.605992 CCTTACCTTTCCCCGGGAC 59.394 63.158 26.32 0.00 0.00 4.46
2047 2444 1.605992 CTTACCTTTCCCCGGGACC 59.394 63.158 26.32 0.00 0.00 4.46
2048 2445 2.248086 CTTACCTTTCCCCGGGACCG 62.248 65.000 26.32 5.20 39.44 4.79
2049 2446 3.544503 TACCTTTCCCCGGGACCGT 62.545 63.158 26.32 12.83 37.81 4.83
2050 2447 3.643554 CCTTTCCCCGGGACCGTT 61.644 66.667 26.32 0.00 37.81 4.44
2051 2448 2.433004 CTTTCCCCGGGACCGTTT 59.567 61.111 26.32 0.00 37.81 3.60
2052 2449 1.969589 CTTTCCCCGGGACCGTTTG 60.970 63.158 26.32 2.41 37.81 2.93
2053 2450 4.646877 TTCCCCGGGACCGTTTGC 62.647 66.667 26.32 0.00 37.81 3.68
2059 2456 3.292159 GGGACCGTTTGCGCCTTT 61.292 61.111 4.18 0.00 36.67 3.11
2060 2457 2.725641 GGACCGTTTGCGCCTTTT 59.274 55.556 4.18 0.00 36.67 2.27
2061 2458 1.660264 GGACCGTTTGCGCCTTTTG 60.660 57.895 4.18 0.00 36.67 2.44
2062 2459 1.660264 GACCGTTTGCGCCTTTTGG 60.660 57.895 4.18 2.72 44.18 3.28
2076 2473 4.273005 CCTTTTGGCACACGTATATGAC 57.727 45.455 0.00 0.00 39.29 3.06
2077 2474 3.687212 CCTTTTGGCACACGTATATGACA 59.313 43.478 0.00 0.00 39.29 3.58
2078 2475 4.201812 CCTTTTGGCACACGTATATGACAG 60.202 45.833 0.00 0.00 39.29 3.51
2079 2476 3.603158 TTGGCACACGTATATGACAGT 57.397 42.857 0.00 0.00 39.29 3.55
2080 2477 2.887337 TGGCACACGTATATGACAGTG 58.113 47.619 0.00 5.89 38.06 3.66
2081 2478 2.232696 TGGCACACGTATATGACAGTGT 59.767 45.455 0.00 0.00 42.54 3.55
2082 2479 2.858344 GGCACACGTATATGACAGTGTC 59.142 50.000 16.68 16.68 41.02 3.67
2083 2480 2.530297 GCACACGTATATGACAGTGTCG 59.470 50.000 18.17 8.40 41.02 4.35
2084 2481 2.530297 CACACGTATATGACAGTGTCGC 59.470 50.000 18.17 5.39 41.02 5.19
2085 2482 2.422479 ACACGTATATGACAGTGTCGCT 59.578 45.455 18.17 10.61 39.80 4.93
2086 2483 3.624410 ACACGTATATGACAGTGTCGCTA 59.376 43.478 18.17 12.38 39.80 4.26
2087 2484 4.212150 CACGTATATGACAGTGTCGCTAG 58.788 47.826 18.17 9.64 34.95 3.42
2088 2485 3.227147 CGTATATGACAGTGTCGCTAGC 58.773 50.000 18.17 4.06 34.95 3.42
2089 2486 3.303791 CGTATATGACAGTGTCGCTAGCA 60.304 47.826 18.17 0.52 34.95 3.49
2090 2487 4.613850 CGTATATGACAGTGTCGCTAGCAT 60.614 45.833 18.17 8.25 34.95 3.79
2091 2488 2.215907 ATGACAGTGTCGCTAGCATC 57.784 50.000 18.17 7.35 34.95 3.91
2092 2489 0.173481 TGACAGTGTCGCTAGCATCC 59.827 55.000 18.17 1.76 34.95 3.51
2093 2490 0.173481 GACAGTGTCGCTAGCATCCA 59.827 55.000 16.45 4.65 0.00 3.41
2094 2491 0.826715 ACAGTGTCGCTAGCATCCAT 59.173 50.000 16.45 0.00 0.00 3.41
2095 2492 2.031870 ACAGTGTCGCTAGCATCCATA 58.968 47.619 16.45 0.00 0.00 2.74
2096 2493 2.630098 ACAGTGTCGCTAGCATCCATAT 59.370 45.455 16.45 0.00 0.00 1.78
2097 2494 2.991866 CAGTGTCGCTAGCATCCATATG 59.008 50.000 16.45 7.17 36.09 1.78
2098 2495 2.893489 AGTGTCGCTAGCATCCATATGA 59.107 45.455 16.45 0.00 34.84 2.15
2099 2496 3.513119 AGTGTCGCTAGCATCCATATGAT 59.487 43.478 16.45 0.00 34.84 2.45
2100 2497 4.706962 AGTGTCGCTAGCATCCATATGATA 59.293 41.667 16.45 0.00 34.84 2.15
2101 2498 5.185828 AGTGTCGCTAGCATCCATATGATAA 59.814 40.000 16.45 0.00 33.75 1.75
2102 2499 5.518128 GTGTCGCTAGCATCCATATGATAAG 59.482 44.000 16.45 0.00 33.75 1.73
2103 2500 5.046529 GTCGCTAGCATCCATATGATAAGG 58.953 45.833 16.45 0.00 33.75 2.69
2104 2501 4.956075 TCGCTAGCATCCATATGATAAGGA 59.044 41.667 16.45 0.00 33.75 3.36
2105 2502 5.068329 TCGCTAGCATCCATATGATAAGGAG 59.932 44.000 16.45 0.00 33.75 3.69
2106 2503 5.055812 GCTAGCATCCATATGATAAGGAGC 58.944 45.833 10.63 6.37 33.75 4.70
2107 2504 4.500499 AGCATCCATATGATAAGGAGCC 57.500 45.455 3.65 0.00 34.84 4.70
2108 2505 3.201708 AGCATCCATATGATAAGGAGCCC 59.798 47.826 3.65 0.00 34.84 5.19
2109 2506 3.801698 CATCCATATGATAAGGAGCCCG 58.198 50.000 3.65 0.00 34.84 6.13
2110 2507 2.187958 TCCATATGATAAGGAGCCCGG 58.812 52.381 3.65 0.00 0.00 5.73
2111 2508 1.210478 CCATATGATAAGGAGCCCGGG 59.790 57.143 19.09 19.09 0.00 5.73
2112 2509 0.912486 ATATGATAAGGAGCCCGGGC 59.088 55.000 39.29 39.29 42.33 6.13
2123 2520 3.479203 CCCGGGCTGACATGGCTA 61.479 66.667 8.08 0.00 0.00 3.93
2124 2521 2.109799 CCGGGCTGACATGGCTAG 59.890 66.667 0.00 0.00 0.00 3.42
2125 2522 2.735772 CCGGGCTGACATGGCTAGT 61.736 63.158 0.00 0.00 0.00 2.57
2126 2523 1.227380 CGGGCTGACATGGCTAGTC 60.227 63.158 0.00 0.00 36.55 2.59
2127 2524 1.227380 GGGCTGACATGGCTAGTCG 60.227 63.158 0.00 2.82 38.83 4.18
2128 2525 1.517832 GGCTGACATGGCTAGTCGT 59.482 57.895 0.00 0.00 38.83 4.34
2129 2526 0.744874 GGCTGACATGGCTAGTCGTA 59.255 55.000 0.00 0.00 38.83 3.43
2130 2527 1.136305 GGCTGACATGGCTAGTCGTAA 59.864 52.381 0.00 0.00 38.83 3.18
2131 2528 2.418197 GGCTGACATGGCTAGTCGTAAA 60.418 50.000 0.00 0.00 38.83 2.01
2132 2529 2.603560 GCTGACATGGCTAGTCGTAAAC 59.396 50.000 0.00 0.00 38.83 2.01
2133 2530 3.187700 CTGACATGGCTAGTCGTAAACC 58.812 50.000 0.00 0.00 38.83 3.27
2134 2531 2.093869 TGACATGGCTAGTCGTAAACCC 60.094 50.000 0.00 0.00 38.83 4.11
2135 2532 1.903860 ACATGGCTAGTCGTAAACCCA 59.096 47.619 0.00 0.00 0.00 4.51
2136 2533 2.303600 ACATGGCTAGTCGTAAACCCAA 59.696 45.455 0.00 0.00 0.00 4.12
2137 2534 3.244630 ACATGGCTAGTCGTAAACCCAAA 60.245 43.478 0.00 0.00 0.00 3.28
2138 2535 3.048337 TGGCTAGTCGTAAACCCAAAG 57.952 47.619 0.00 0.00 0.00 2.77
2139 2536 2.369532 TGGCTAGTCGTAAACCCAAAGT 59.630 45.455 0.00 0.00 0.00 2.66
2140 2537 2.740447 GGCTAGTCGTAAACCCAAAGTG 59.260 50.000 0.00 0.00 0.00 3.16
2141 2538 2.740447 GCTAGTCGTAAACCCAAAGTGG 59.260 50.000 0.00 0.00 37.25 4.00
2142 2539 1.601166 AGTCGTAAACCCAAAGTGGC 58.399 50.000 0.00 0.00 35.79 5.01
2143 2540 1.134037 AGTCGTAAACCCAAAGTGGCA 60.134 47.619 0.00 0.00 35.79 4.92
2144 2541 1.002142 GTCGTAAACCCAAAGTGGCAC 60.002 52.381 10.29 10.29 35.79 5.01
2145 2542 1.025812 CGTAAACCCAAAGTGGCACA 58.974 50.000 21.41 0.00 35.79 4.57
2146 2543 1.001815 CGTAAACCCAAAGTGGCACAG 60.002 52.381 21.41 9.03 41.80 3.66
2147 2544 2.303175 GTAAACCCAAAGTGGCACAGA 58.697 47.619 21.41 0.00 41.80 3.41
2148 2545 1.111277 AAACCCAAAGTGGCACAGAC 58.889 50.000 21.41 0.00 41.80 3.51
2149 2546 0.258774 AACCCAAAGTGGCACAGACT 59.741 50.000 21.41 0.00 41.80 3.24
2150 2547 0.258774 ACCCAAAGTGGCACAGACTT 59.741 50.000 21.41 1.75 41.80 3.01
2151 2548 1.493022 ACCCAAAGTGGCACAGACTTA 59.507 47.619 21.41 0.00 41.80 2.24
2152 2549 1.880027 CCCAAAGTGGCACAGACTTAC 59.120 52.381 21.41 0.00 41.80 2.34
2153 2550 2.571212 CCAAAGTGGCACAGACTTACA 58.429 47.619 21.41 0.00 41.80 2.41
2154 2551 2.549754 CCAAAGTGGCACAGACTTACAG 59.450 50.000 21.41 0.00 41.80 2.74
2155 2552 2.549754 CAAAGTGGCACAGACTTACAGG 59.450 50.000 21.41 0.00 41.80 4.00
2156 2553 0.687354 AGTGGCACAGACTTACAGGG 59.313 55.000 21.41 0.00 41.80 4.45
2157 2554 0.685097 GTGGCACAGACTTACAGGGA 59.315 55.000 13.86 0.00 41.80 4.20
2158 2555 0.685097 TGGCACAGACTTACAGGGAC 59.315 55.000 0.00 0.00 0.00 4.46
2159 2556 0.685097 GGCACAGACTTACAGGGACA 59.315 55.000 0.00 0.00 0.00 4.02
2160 2557 1.338200 GGCACAGACTTACAGGGACAG 60.338 57.143 0.00 0.00 0.00 3.51
2161 2558 1.338200 GCACAGACTTACAGGGACAGG 60.338 57.143 0.00 0.00 0.00 4.00
2162 2559 0.977395 ACAGACTTACAGGGACAGGC 59.023 55.000 0.00 0.00 0.00 4.85
2163 2560 0.976641 CAGACTTACAGGGACAGGCA 59.023 55.000 0.00 0.00 0.00 4.75
2164 2561 1.556911 CAGACTTACAGGGACAGGCAT 59.443 52.381 0.00 0.00 0.00 4.40
2165 2562 1.834263 AGACTTACAGGGACAGGCATC 59.166 52.381 0.00 0.00 0.00 3.91
2166 2563 0.912486 ACTTACAGGGACAGGCATCC 59.088 55.000 0.00 0.00 38.13 3.51
2167 2564 0.911769 CTTACAGGGACAGGCATCCA 59.088 55.000 9.72 0.00 40.96 3.41
2168 2565 1.492176 CTTACAGGGACAGGCATCCAT 59.508 52.381 9.72 0.00 40.96 3.41
2169 2566 4.573210 CAGGGACAGGCATCCATG 57.427 61.111 7.89 7.89 43.58 3.66
2170 2567 4.506076 AGGGACAGGCATCCATGA 57.494 55.556 9.72 0.00 40.96 3.07
2171 2568 1.918253 AGGGACAGGCATCCATGAC 59.082 57.895 9.72 0.00 40.96 3.06
2172 2569 1.152881 GGGACAGGCATCCATGACC 60.153 63.158 9.72 0.00 40.96 4.02
2173 2570 1.152881 GGACAGGCATCCATGACCC 60.153 63.158 0.00 0.00 38.77 4.46
2174 2571 1.609239 GACAGGCATCCATGACCCA 59.391 57.895 0.00 0.00 36.08 4.51
2175 2572 0.465097 GACAGGCATCCATGACCCAG 60.465 60.000 0.00 0.00 36.08 4.45
2176 2573 1.826921 CAGGCATCCATGACCCAGC 60.827 63.158 0.00 0.00 36.08 4.85
2177 2574 2.276409 GGCATCCATGACCCAGCA 59.724 61.111 0.00 0.00 0.00 4.41
2178 2575 1.152610 GGCATCCATGACCCAGCAT 60.153 57.895 0.00 0.00 0.00 3.79
2179 2576 1.177256 GGCATCCATGACCCAGCATC 61.177 60.000 0.00 0.00 0.00 3.91
2180 2577 1.512996 GCATCCATGACCCAGCATCG 61.513 60.000 0.00 0.00 0.00 3.84
2181 2578 0.107268 CATCCATGACCCAGCATCGA 59.893 55.000 0.00 0.00 0.00 3.59
2182 2579 0.839277 ATCCATGACCCAGCATCGAA 59.161 50.000 0.00 0.00 0.00 3.71
2183 2580 0.107703 TCCATGACCCAGCATCGAAC 60.108 55.000 0.00 0.00 0.00 3.95
2184 2581 1.431488 CCATGACCCAGCATCGAACG 61.431 60.000 0.00 0.00 0.00 3.95
2185 2582 0.740868 CATGACCCAGCATCGAACGT 60.741 55.000 0.00 0.00 0.00 3.99
2186 2583 0.740868 ATGACCCAGCATCGAACGTG 60.741 55.000 0.00 0.00 0.00 4.49
2187 2584 1.374252 GACCCAGCATCGAACGTGT 60.374 57.895 0.00 0.00 0.00 4.49
2188 2585 1.352156 GACCCAGCATCGAACGTGTC 61.352 60.000 0.00 0.00 0.00 3.67
2196 2593 4.544762 CGAACGTGTCGGTCATCA 57.455 55.556 7.89 0.00 44.54 3.07
2197 2594 2.349843 CGAACGTGTCGGTCATCAG 58.650 57.895 7.89 0.00 44.54 2.90
2198 2595 1.674611 CGAACGTGTCGGTCATCAGC 61.675 60.000 7.89 0.00 44.54 4.26
2199 2596 1.674611 GAACGTGTCGGTCATCAGCG 61.675 60.000 2.27 0.00 43.67 5.18
2205 2602 4.889427 CGGTCATCAGCGAGTGAA 57.111 55.556 0.00 0.00 46.86 3.18
2206 2603 3.352447 CGGTCATCAGCGAGTGAAT 57.648 52.632 0.00 0.00 46.86 2.57
2207 2604 1.203928 CGGTCATCAGCGAGTGAATC 58.796 55.000 0.00 0.00 46.86 2.52
2208 2605 1.576356 GGTCATCAGCGAGTGAATCC 58.424 55.000 0.00 0.00 39.19 3.01
2209 2606 1.134699 GGTCATCAGCGAGTGAATCCA 60.135 52.381 0.00 0.00 39.19 3.41
2210 2607 2.200067 GTCATCAGCGAGTGAATCCAG 58.800 52.381 0.00 0.00 39.19 3.86
2211 2608 1.137675 TCATCAGCGAGTGAATCCAGG 59.862 52.381 0.00 0.00 39.19 4.45
2212 2609 0.179062 ATCAGCGAGTGAATCCAGGC 60.179 55.000 0.00 0.00 39.19 4.85
2213 2610 1.220206 CAGCGAGTGAATCCAGGCT 59.780 57.895 0.00 0.00 0.00 4.58
2214 2611 1.088340 CAGCGAGTGAATCCAGGCTG 61.088 60.000 7.75 7.75 41.42 4.85
2215 2612 1.078848 GCGAGTGAATCCAGGCTGT 60.079 57.895 14.43 0.00 0.00 4.40
2216 2613 0.175760 GCGAGTGAATCCAGGCTGTA 59.824 55.000 14.43 0.00 0.00 2.74
2217 2614 1.804372 GCGAGTGAATCCAGGCTGTAG 60.804 57.143 14.43 0.00 0.00 2.74
2218 2615 1.804372 CGAGTGAATCCAGGCTGTAGC 60.804 57.143 14.43 0.00 41.14 3.58
2219 2616 1.208052 GAGTGAATCCAGGCTGTAGCA 59.792 52.381 14.43 3.20 44.36 3.49
2220 2617 1.065854 AGTGAATCCAGGCTGTAGCAC 60.066 52.381 14.43 14.76 44.36 4.40
2221 2618 1.065854 GTGAATCCAGGCTGTAGCACT 60.066 52.381 14.43 0.00 44.36 4.40
2222 2619 1.065926 TGAATCCAGGCTGTAGCACTG 60.066 52.381 14.43 10.05 44.36 3.66
2224 2621 2.270205 CCAGGCTGTAGCACTGGG 59.730 66.667 22.92 9.51 46.46 4.45
2225 2622 2.437359 CAGGCTGTAGCACTGGGC 60.437 66.667 6.28 0.00 44.36 5.36
2234 2631 2.124942 GCACTGGGCTAGCAGGAC 60.125 66.667 18.24 4.03 40.25 3.85
2235 2632 2.664081 GCACTGGGCTAGCAGGACT 61.664 63.158 18.24 0.00 40.25 3.85
2236 2633 1.519719 CACTGGGCTAGCAGGACTC 59.480 63.158 18.24 0.00 0.00 3.36
2237 2634 1.687493 ACTGGGCTAGCAGGACTCC 60.687 63.158 18.24 7.80 0.00 3.85
2238 2635 2.759973 TGGGCTAGCAGGACTCCG 60.760 66.667 18.24 0.00 0.00 4.63
2239 2636 3.541713 GGGCTAGCAGGACTCCGG 61.542 72.222 18.24 0.00 0.00 5.14
2240 2637 2.760385 GGCTAGCAGGACTCCGGT 60.760 66.667 18.24 0.00 0.00 5.28
2241 2638 2.496817 GCTAGCAGGACTCCGGTG 59.503 66.667 10.63 0.00 0.00 4.94
2242 2639 2.052690 GCTAGCAGGACTCCGGTGA 61.053 63.158 10.63 0.00 0.00 4.02
2243 2640 1.605058 GCTAGCAGGACTCCGGTGAA 61.605 60.000 10.63 0.00 0.00 3.18
2244 2641 0.173708 CTAGCAGGACTCCGGTGAAC 59.826 60.000 11.17 2.34 0.00 3.18
2245 2642 1.255667 TAGCAGGACTCCGGTGAACC 61.256 60.000 11.17 12.62 0.00 3.62
2255 2652 2.436115 GGTGAACCGGGCTGTAGC 60.436 66.667 6.32 0.00 41.14 3.58
2256 2653 2.813908 GTGAACCGGGCTGTAGCG 60.814 66.667 6.32 0.00 43.26 4.26
2257 2654 4.077184 TGAACCGGGCTGTAGCGG 62.077 66.667 6.32 0.00 43.26 5.52
2258 2655 4.832608 GAACCGGGCTGTAGCGGG 62.833 72.222 6.32 10.03 43.26 6.13
2262 2659 3.845259 CGGGCTGTAGCGGGCTAA 61.845 66.667 1.27 0.00 43.26 3.09
2263 2660 2.203029 GGGCTGTAGCGGGCTAAC 60.203 66.667 1.27 0.00 43.26 2.34
2264 2661 2.582436 GGCTGTAGCGGGCTAACA 59.418 61.111 1.27 2.96 43.26 2.41
2265 2662 1.521681 GGCTGTAGCGGGCTAACAG 60.522 63.158 17.99 17.99 43.26 3.16
2266 2663 1.521681 GCTGTAGCGGGCTAACAGG 60.522 63.158 21.01 8.29 33.00 4.00
2267 2664 1.956629 GCTGTAGCGGGCTAACAGGA 61.957 60.000 21.01 0.00 33.00 3.86
2268 2665 0.179108 CTGTAGCGGGCTAACAGGAC 60.179 60.000 16.04 3.33 30.94 3.85
2269 2666 0.613853 TGTAGCGGGCTAACAGGACT 60.614 55.000 1.27 0.00 0.00 3.85
2270 2667 0.102663 GTAGCGGGCTAACAGGACTC 59.897 60.000 1.27 0.00 0.00 3.36
2271 2668 1.041447 TAGCGGGCTAACAGGACTCC 61.041 60.000 0.00 0.00 0.00 3.85
2272 2669 2.494918 CGGGCTAACAGGACTCCG 59.505 66.667 0.00 0.00 0.00 4.63
2273 2670 2.901042 GGGCTAACAGGACTCCGG 59.099 66.667 0.00 0.00 0.00 5.14
2274 2671 1.988406 GGGCTAACAGGACTCCGGT 60.988 63.158 0.00 0.00 32.35 5.28
2275 2672 0.685458 GGGCTAACAGGACTCCGGTA 60.685 60.000 0.00 0.00 30.50 4.02
2276 2673 1.411041 GGCTAACAGGACTCCGGTAT 58.589 55.000 0.00 0.00 30.50 2.73
2277 2674 1.761198 GGCTAACAGGACTCCGGTATT 59.239 52.381 0.00 0.00 30.50 1.89
2278 2675 2.223994 GGCTAACAGGACTCCGGTATTC 60.224 54.545 0.00 0.00 30.50 1.75
2279 2676 2.429610 GCTAACAGGACTCCGGTATTCA 59.570 50.000 0.00 0.00 30.50 2.57
2280 2677 3.069729 GCTAACAGGACTCCGGTATTCAT 59.930 47.826 0.00 0.00 30.50 2.57
2281 2678 3.821421 AACAGGACTCCGGTATTCATC 57.179 47.619 0.00 0.00 30.50 2.92
2282 2679 1.681793 ACAGGACTCCGGTATTCATCG 59.318 52.381 0.00 0.00 28.50 3.84
2283 2680 0.674534 AGGACTCCGGTATTCATCGC 59.325 55.000 0.00 0.00 0.00 4.58
2284 2681 0.663568 GGACTCCGGTATTCATCGCG 60.664 60.000 0.00 0.00 0.00 5.87
2285 2682 0.030369 GACTCCGGTATTCATCGCGT 59.970 55.000 5.77 0.00 0.00 6.01
2286 2683 0.248907 ACTCCGGTATTCATCGCGTG 60.249 55.000 5.77 3.96 0.00 5.34
2287 2684 0.030235 CTCCGGTATTCATCGCGTGA 59.970 55.000 5.77 0.00 34.25 4.35
2288 2685 0.248743 TCCGGTATTCATCGCGTGAC 60.249 55.000 5.77 0.00 36.32 3.67
2289 2686 0.526739 CCGGTATTCATCGCGTGACA 60.527 55.000 5.77 1.63 36.32 3.58
2290 2687 1.487482 CGGTATTCATCGCGTGACAT 58.513 50.000 5.77 8.34 36.32 3.06
2291 2688 1.858458 CGGTATTCATCGCGTGACATT 59.142 47.619 5.77 0.35 36.32 2.71
2292 2689 2.284150 CGGTATTCATCGCGTGACATTT 59.716 45.455 5.77 0.00 36.32 2.32
2293 2690 3.601586 CGGTATTCATCGCGTGACATTTC 60.602 47.826 5.77 0.00 36.32 2.17
2294 2691 3.303132 GGTATTCATCGCGTGACATTTCC 60.303 47.826 5.77 0.00 36.32 3.13
2295 2692 1.083489 TTCATCGCGTGACATTTCCC 58.917 50.000 5.77 0.00 36.32 3.97
2296 2693 0.742990 TCATCGCGTGACATTTCCCC 60.743 55.000 5.77 0.00 0.00 4.81
2297 2694 1.813753 ATCGCGTGACATTTCCCCG 60.814 57.895 5.77 0.00 0.00 5.73
2298 2695 2.233605 ATCGCGTGACATTTCCCCGA 62.234 55.000 5.77 0.00 0.00 5.14
2299 2696 2.030401 CGCGTGACATTTCCCCGAA 61.030 57.895 0.00 0.00 0.00 4.30
2300 2697 1.794222 GCGTGACATTTCCCCGAAG 59.206 57.895 0.00 0.00 0.00 3.79
2313 2710 4.996976 CGAAGGGACAGACACAGG 57.003 61.111 0.00 0.00 0.00 4.00
2314 2711 2.351777 CGAAGGGACAGACACAGGA 58.648 57.895 0.00 0.00 0.00 3.86
2315 2712 0.679505 CGAAGGGACAGACACAGGAA 59.320 55.000 0.00 0.00 0.00 3.36
2316 2713 1.605712 CGAAGGGACAGACACAGGAAC 60.606 57.143 0.00 0.00 0.00 3.62
2317 2714 0.393077 AAGGGACAGACACAGGAACG 59.607 55.000 0.00 0.00 0.00 3.95
2318 2715 0.469331 AGGGACAGACACAGGAACGA 60.469 55.000 0.00 0.00 0.00 3.85
2319 2716 0.391597 GGGACAGACACAGGAACGAA 59.608 55.000 0.00 0.00 0.00 3.85
2320 2717 1.605712 GGGACAGACACAGGAACGAAG 60.606 57.143 0.00 0.00 0.00 3.79
2321 2718 1.340248 GGACAGACACAGGAACGAAGA 59.660 52.381 0.00 0.00 0.00 2.87
2322 2719 2.223971 GGACAGACACAGGAACGAAGAA 60.224 50.000 0.00 0.00 0.00 2.52
2323 2720 3.053455 GACAGACACAGGAACGAAGAAG 58.947 50.000 0.00 0.00 0.00 2.85
2324 2721 2.224066 ACAGACACAGGAACGAAGAAGG 60.224 50.000 0.00 0.00 0.00 3.46
2325 2722 2.035961 CAGACACAGGAACGAAGAAGGA 59.964 50.000 0.00 0.00 0.00 3.36
2326 2723 2.036089 AGACACAGGAACGAAGAAGGAC 59.964 50.000 0.00 0.00 0.00 3.85
2327 2724 1.760613 ACACAGGAACGAAGAAGGACA 59.239 47.619 0.00 0.00 0.00 4.02
2328 2725 2.135933 CACAGGAACGAAGAAGGACAC 58.864 52.381 0.00 0.00 0.00 3.67
2329 2726 1.760613 ACAGGAACGAAGAAGGACACA 59.239 47.619 0.00 0.00 0.00 3.72
2330 2727 2.368875 ACAGGAACGAAGAAGGACACAT 59.631 45.455 0.00 0.00 0.00 3.21
2331 2728 2.738846 CAGGAACGAAGAAGGACACATG 59.261 50.000 0.00 0.00 0.00 3.21
2332 2729 1.464997 GGAACGAAGAAGGACACATGC 59.535 52.381 0.00 0.00 0.00 4.06
2333 2730 1.464997 GAACGAAGAAGGACACATGCC 59.535 52.381 0.00 0.00 0.00 4.40
2334 2731 0.670546 ACGAAGAAGGACACATGCCG 60.671 55.000 0.00 0.00 0.00 5.69
2335 2732 1.361668 CGAAGAAGGACACATGCCGG 61.362 60.000 0.00 0.00 0.00 6.13
2336 2733 1.648467 GAAGAAGGACACATGCCGGC 61.648 60.000 22.73 22.73 0.00 6.13
2337 2734 3.134127 GAAGGACACATGCCGGCC 61.134 66.667 26.77 6.80 0.00 6.13
2338 2735 3.918253 GAAGGACACATGCCGGCCA 62.918 63.158 26.77 12.96 0.00 5.36
2339 2736 3.925630 AAGGACACATGCCGGCCAG 62.926 63.158 26.77 19.13 0.00 4.85
2343 2740 4.488136 CACATGCCGGCCAGCCTA 62.488 66.667 26.77 3.54 0.00 3.93
2344 2741 3.727258 ACATGCCGGCCAGCCTAA 61.727 61.111 26.77 2.60 0.00 2.69
2345 2742 2.903855 CATGCCGGCCAGCCTAAG 60.904 66.667 26.77 0.00 0.00 2.18
2346 2743 3.411517 ATGCCGGCCAGCCTAAGT 61.412 61.111 26.77 0.00 0.00 2.24
2347 2744 3.704231 ATGCCGGCCAGCCTAAGTG 62.704 63.158 26.77 0.00 0.00 3.16
2348 2745 4.410400 GCCGGCCAGCCTAAGTGT 62.410 66.667 18.11 0.00 0.00 3.55
2349 2746 2.351276 CCGGCCAGCCTAAGTGTT 59.649 61.111 2.24 0.00 0.00 3.32
2350 2747 1.745489 CCGGCCAGCCTAAGTGTTC 60.745 63.158 2.24 0.00 0.00 3.18
2351 2748 1.745489 CGGCCAGCCTAAGTGTTCC 60.745 63.158 2.24 0.00 0.00 3.62
2352 2749 1.745489 GGCCAGCCTAAGTGTTCCG 60.745 63.158 0.00 0.00 0.00 4.30
2353 2750 1.745489 GCCAGCCTAAGTGTTCCGG 60.745 63.158 0.00 0.00 0.00 5.14
2354 2751 1.980052 CCAGCCTAAGTGTTCCGGA 59.020 57.895 0.00 0.00 0.00 5.14
2355 2752 0.108138 CCAGCCTAAGTGTTCCGGAG 60.108 60.000 3.34 0.00 0.00 4.63
2356 2753 0.741221 CAGCCTAAGTGTTCCGGAGC 60.741 60.000 11.99 11.99 0.00 4.70
2357 2754 1.192146 AGCCTAAGTGTTCCGGAGCA 61.192 55.000 17.98 17.98 0.00 4.26
2358 2755 0.741221 GCCTAAGTGTTCCGGAGCAG 60.741 60.000 22.46 10.60 0.00 4.24
2359 2756 0.608640 CCTAAGTGTTCCGGAGCAGT 59.391 55.000 22.46 22.07 0.00 4.40
2360 2757 1.822990 CCTAAGTGTTCCGGAGCAGTA 59.177 52.381 26.57 17.61 0.00 2.74
2361 2758 2.159226 CCTAAGTGTTCCGGAGCAGTAG 60.159 54.545 26.57 24.18 0.00 2.57
2362 2759 0.037232 AAGTGTTCCGGAGCAGTAGC 60.037 55.000 26.57 13.12 42.56 3.58
2363 2760 1.185618 AGTGTTCCGGAGCAGTAGCA 61.186 55.000 25.38 0.00 45.49 3.49
2364 2761 0.320421 GTGTTCCGGAGCAGTAGCAA 60.320 55.000 22.46 0.00 45.49 3.91
2365 2762 0.037326 TGTTCCGGAGCAGTAGCAAG 60.037 55.000 17.98 0.00 45.49 4.01
2366 2763 1.079127 TTCCGGAGCAGTAGCAAGC 60.079 57.895 3.34 0.00 45.49 4.01
2367 2764 1.544825 TTCCGGAGCAGTAGCAAGCT 61.545 55.000 3.34 0.00 45.49 3.74
2368 2765 0.683179 TCCGGAGCAGTAGCAAGCTA 60.683 55.000 0.00 0.00 45.49 3.32
2369 2766 0.528684 CCGGAGCAGTAGCAAGCTAC 60.529 60.000 21.42 21.42 46.70 3.58
2376 2773 3.788672 GTAGCAAGCTACCATGGCT 57.211 52.632 18.98 3.41 42.11 4.75
2377 2774 1.587547 GTAGCAAGCTACCATGGCTC 58.412 55.000 18.98 0.41 42.11 4.70
2378 2775 1.134401 GTAGCAAGCTACCATGGCTCA 60.134 52.381 18.98 0.00 42.11 4.26
2379 2776 0.107312 AGCAAGCTACCATGGCTCAG 60.107 55.000 13.04 7.98 39.30 3.35
2380 2777 0.393537 GCAAGCTACCATGGCTCAGT 60.394 55.000 13.04 0.00 39.30 3.41
2381 2778 1.376543 CAAGCTACCATGGCTCAGTG 58.623 55.000 13.04 0.89 39.30 3.66
2382 2779 0.254178 AAGCTACCATGGCTCAGTGG 59.746 55.000 13.04 0.00 39.30 4.00
2383 2780 0.618680 AGCTACCATGGCTCAGTGGA 60.619 55.000 13.04 0.00 38.86 4.02
2384 2781 0.253044 GCTACCATGGCTCAGTGGAA 59.747 55.000 13.04 0.00 38.86 3.53
2385 2782 1.340017 GCTACCATGGCTCAGTGGAAA 60.340 52.381 13.04 0.00 38.86 3.13
2386 2783 2.359900 CTACCATGGCTCAGTGGAAAC 58.640 52.381 13.04 0.00 38.86 2.78
2387 2784 0.478072 ACCATGGCTCAGTGGAAACA 59.522 50.000 13.04 0.00 38.86 2.83
2402 2799 4.906618 TGGAAACACTAGGAGACATTTCC 58.093 43.478 6.61 6.61 43.50 3.13
2403 2800 4.262617 GGAAACACTAGGAGACATTTCCC 58.737 47.826 0.00 0.00 39.34 3.97
2404 2801 3.611766 AACACTAGGAGACATTTCCCG 57.388 47.619 0.00 0.00 38.02 5.14
2405 2802 1.831736 ACACTAGGAGACATTTCCCGG 59.168 52.381 0.00 0.00 38.02 5.73
2406 2803 1.831736 CACTAGGAGACATTTCCCGGT 59.168 52.381 0.00 0.00 38.02 5.28
2407 2804 3.028850 CACTAGGAGACATTTCCCGGTA 58.971 50.000 0.00 0.00 38.02 4.02
2408 2805 3.449737 CACTAGGAGACATTTCCCGGTAA 59.550 47.826 0.00 0.00 38.02 2.85
2409 2806 3.705072 ACTAGGAGACATTTCCCGGTAAG 59.295 47.826 0.00 0.00 38.02 2.34
2410 2807 2.829023 AGGAGACATTTCCCGGTAAGA 58.171 47.619 0.00 0.00 38.02 2.10
2411 2808 2.766828 AGGAGACATTTCCCGGTAAGAG 59.233 50.000 0.00 0.00 38.02 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
120 126 9.890629 TTAGCATTGAGATTCACATTTACTACT 57.109 29.630 0.00 0.00 0.00 2.57
237 243 5.347907 CGTAAGTTACTCACCTCATTTGTCC 59.652 44.000 11.17 0.00 0.00 4.02
286 298 0.755686 CTCCTCGAATCCCAGGAAGG 59.244 60.000 0.00 0.00 38.39 3.46
302 314 1.222113 GTAAGCAGGTGGGCTCTCC 59.778 63.158 0.00 0.00 45.07 3.71
430 442 2.844451 GCGAACACAAGGCAAGCCA 61.844 57.895 14.40 0.00 38.92 4.75
431 443 2.050077 GCGAACACAAGGCAAGCC 60.050 61.111 2.02 2.02 0.00 4.35
432 444 1.658409 GTGCGAACACAAGGCAAGC 60.658 57.895 0.00 0.00 46.61 4.01
433 445 4.614673 GTGCGAACACAAGGCAAG 57.385 55.556 0.00 0.00 46.61 4.01
441 453 5.772635 ACAGATCTGGCTAGTGCGAACAC 62.773 52.174 26.08 0.00 40.09 3.32
442 454 1.134995 CAGATCTGGCTAGTGCGAACA 60.135 52.381 15.38 0.00 40.82 3.18
443 455 1.134965 ACAGATCTGGCTAGTGCGAAC 60.135 52.381 26.08 0.00 40.82 3.95
446 458 0.593518 CGACAGATCTGGCTAGTGCG 60.594 60.000 25.90 12.96 40.82 5.34
449 461 2.660572 ACATCGACAGATCTGGCTAGT 58.339 47.619 25.90 17.52 36.16 2.57
686 707 2.052237 GCTGTGTCGTTGCGGTTG 60.052 61.111 0.00 0.00 0.00 3.77
793 824 2.171489 GACGAGGTTGGCTTTCACGC 62.171 60.000 0.00 0.00 0.00 5.34
954 1205 2.738521 GAGAGCTTGTTCGCCGCA 60.739 61.111 0.00 0.00 0.00 5.69
1026 1277 0.527817 GGGAGTAGTTCATGCCGTCG 60.528 60.000 0.00 0.00 0.00 5.12
1061 1312 1.472480 CGAAGACCATTTCGGCCATTT 59.528 47.619 2.24 0.00 44.56 2.32
1062 1313 1.094785 CGAAGACCATTTCGGCCATT 58.905 50.000 2.24 0.00 44.56 3.16
1142 1523 0.953471 TGAAACATCCCGGCAAGACG 60.953 55.000 0.00 0.00 0.00 4.18
1175 1565 4.084952 CGTCATGTCTGCCAAACAAAAATG 60.085 41.667 0.00 0.00 0.00 2.32
1227 1620 3.001406 CCTCCCCGAACCGTCCTT 61.001 66.667 0.00 0.00 0.00 3.36
1601 1995 5.183331 AGTCGACTGTGATTTAGCAAGACTA 59.817 40.000 19.30 0.00 34.05 2.59
1708 2103 8.264347 TCTCAGTCAAGTGGCATAACATATAAA 58.736 33.333 0.00 0.00 0.00 1.40
1715 2110 3.931578 AGTCTCAGTCAAGTGGCATAAC 58.068 45.455 0.00 0.00 0.00 1.89
1756 2151 7.094334 GCCTTAGAGTGTGGCTAAATTTTAGTT 60.094 37.037 15.69 0.00 43.05 2.24
1765 2160 2.837591 TCATGCCTTAGAGTGTGGCTAA 59.162 45.455 0.00 0.00 46.23 3.09
1818 2215 9.085250 CATGAGATCTTATACGAAGATTCATGG 57.915 37.037 23.84 15.40 41.28 3.66
1821 2218 8.409358 TCCATGAGATCTTATACGAAGATTCA 57.591 34.615 0.00 7.56 37.14 2.57
1836 2233 8.214721 TCACGTGATACTATATCCATGAGATC 57.785 38.462 15.76 0.00 36.33 2.75
1882 2279 6.833342 TTACGGGATCGCTAAATTTTAGTC 57.167 37.500 15.69 7.20 40.63 2.59
1888 2285 7.614124 TTAAAGTTTACGGGATCGCTAAATT 57.386 32.000 8.28 6.18 40.63 1.82
1939 2336 0.323178 GTACTGAGTCGGGGTCCTGA 60.323 60.000 3.50 0.00 0.00 3.86
1940 2337 1.321074 GGTACTGAGTCGGGGTCCTG 61.321 65.000 3.50 0.00 0.00 3.86
1941 2338 1.000107 GGTACTGAGTCGGGGTCCT 60.000 63.158 3.50 0.00 0.00 3.85
1942 2339 1.304713 TGGTACTGAGTCGGGGTCC 60.305 63.158 3.50 3.44 0.00 4.46
1943 2340 0.896940 TGTGGTACTGAGTCGGGGTC 60.897 60.000 3.50 0.00 0.00 4.46
1944 2341 0.252103 ATGTGGTACTGAGTCGGGGT 60.252 55.000 3.50 0.00 0.00 4.95
1945 2342 0.460311 GATGTGGTACTGAGTCGGGG 59.540 60.000 3.50 0.00 0.00 5.73
1946 2343 0.100682 CGATGTGGTACTGAGTCGGG 59.899 60.000 3.50 0.00 0.00 5.14
1947 2344 1.092348 TCGATGTGGTACTGAGTCGG 58.908 55.000 0.00 0.00 0.00 4.79
1948 2345 2.614520 AGATCGATGTGGTACTGAGTCG 59.385 50.000 0.54 0.00 0.00 4.18
1949 2346 4.319911 GCTAGATCGATGTGGTACTGAGTC 60.320 50.000 0.54 0.00 0.00 3.36
1950 2347 3.566322 GCTAGATCGATGTGGTACTGAGT 59.434 47.826 0.54 0.00 0.00 3.41
1951 2348 3.565902 TGCTAGATCGATGTGGTACTGAG 59.434 47.826 0.54 0.00 0.00 3.35
1952 2349 3.551846 TGCTAGATCGATGTGGTACTGA 58.448 45.455 0.54 0.00 0.00 3.41
1953 2350 3.990318 TGCTAGATCGATGTGGTACTG 57.010 47.619 0.54 0.00 0.00 2.74
1954 2351 3.891977 ACATGCTAGATCGATGTGGTACT 59.108 43.478 0.54 0.00 0.00 2.73
1955 2352 4.244425 ACATGCTAGATCGATGTGGTAC 57.756 45.455 0.54 0.00 0.00 3.34
1956 2353 5.300792 TGTTACATGCTAGATCGATGTGGTA 59.699 40.000 0.54 0.00 32.59 3.25
1957 2354 4.099419 TGTTACATGCTAGATCGATGTGGT 59.901 41.667 0.54 0.00 32.59 4.16
1958 2355 4.445718 GTGTTACATGCTAGATCGATGTGG 59.554 45.833 0.54 0.91 32.59 4.17
1959 2356 5.043248 TGTGTTACATGCTAGATCGATGTG 58.957 41.667 0.54 0.00 32.59 3.21
1960 2357 5.262588 TGTGTTACATGCTAGATCGATGT 57.737 39.130 0.54 0.00 34.68 3.06
1961 2358 5.922544 TGATGTGTTACATGCTAGATCGATG 59.077 40.000 0.54 0.00 39.27 3.84
1962 2359 6.089249 TGATGTGTTACATGCTAGATCGAT 57.911 37.500 0.00 0.00 39.27 3.59
1963 2360 5.514274 TGATGTGTTACATGCTAGATCGA 57.486 39.130 0.00 0.00 39.27 3.59
1964 2361 7.756722 TGATATGATGTGTTACATGCTAGATCG 59.243 37.037 0.00 0.00 39.27 3.69
1965 2362 8.867935 GTGATATGATGTGTTACATGCTAGATC 58.132 37.037 0.00 0.00 39.27 2.75
1966 2363 8.591940 AGTGATATGATGTGTTACATGCTAGAT 58.408 33.333 0.00 0.00 39.27 1.98
1967 2364 7.955918 AGTGATATGATGTGTTACATGCTAGA 58.044 34.615 0.00 0.00 39.27 2.43
1968 2365 8.599055 AAGTGATATGATGTGTTACATGCTAG 57.401 34.615 0.00 0.00 39.27 3.42
1969 2366 8.829612 CAAAGTGATATGATGTGTTACATGCTA 58.170 33.333 0.00 0.00 39.27 3.49
1970 2367 7.680350 GCAAAGTGATATGATGTGTTACATGCT 60.680 37.037 0.00 0.00 39.27 3.79
1971 2368 6.415867 GCAAAGTGATATGATGTGTTACATGC 59.584 38.462 0.00 0.00 39.27 4.06
1972 2369 6.630045 CGCAAAGTGATATGATGTGTTACATG 59.370 38.462 0.00 0.00 39.27 3.21
1973 2370 6.238456 CCGCAAAGTGATATGATGTGTTACAT 60.238 38.462 0.00 0.00 42.43 2.29
1974 2371 5.064579 CCGCAAAGTGATATGATGTGTTACA 59.935 40.000 0.00 0.00 0.00 2.41
1975 2372 5.501715 CCGCAAAGTGATATGATGTGTTAC 58.498 41.667 0.00 0.00 0.00 2.50
1976 2373 4.035091 GCCGCAAAGTGATATGATGTGTTA 59.965 41.667 0.00 0.00 0.00 2.41
1977 2374 3.181497 GCCGCAAAGTGATATGATGTGTT 60.181 43.478 0.00 0.00 0.00 3.32
1978 2375 2.355756 GCCGCAAAGTGATATGATGTGT 59.644 45.455 0.00 0.00 0.00 3.72
1979 2376 2.287188 GGCCGCAAAGTGATATGATGTG 60.287 50.000 0.00 0.00 0.00 3.21
1980 2377 1.949525 GGCCGCAAAGTGATATGATGT 59.050 47.619 0.00 0.00 0.00 3.06
1981 2378 2.224606 AGGCCGCAAAGTGATATGATG 58.775 47.619 0.00 0.00 0.00 3.07
1982 2379 2.158769 TGAGGCCGCAAAGTGATATGAT 60.159 45.455 6.75 0.00 0.00 2.45
1983 2380 1.209261 TGAGGCCGCAAAGTGATATGA 59.791 47.619 6.75 0.00 0.00 2.15
1984 2381 1.331756 GTGAGGCCGCAAAGTGATATG 59.668 52.381 12.05 0.00 0.00 1.78
1985 2382 1.668419 GTGAGGCCGCAAAGTGATAT 58.332 50.000 12.05 0.00 0.00 1.63
1986 2383 0.739462 CGTGAGGCCGCAAAGTGATA 60.739 55.000 12.05 0.00 0.00 2.15
1987 2384 2.034879 CGTGAGGCCGCAAAGTGAT 61.035 57.895 12.05 0.00 0.00 3.06
1988 2385 2.664851 CGTGAGGCCGCAAAGTGA 60.665 61.111 12.05 0.00 0.00 3.41
1996 2393 4.508128 ATACCGTGCGTGAGGCCG 62.508 66.667 0.00 0.00 42.61 6.13
1997 2394 2.585247 GATACCGTGCGTGAGGCC 60.585 66.667 0.00 0.00 42.61 5.19
1998 2395 2.585247 GGATACCGTGCGTGAGGC 60.585 66.667 0.00 0.00 43.96 4.70
2015 2412 3.697747 TAAGGCGACACCCGTGGG 61.698 66.667 2.58 2.58 40.58 4.61
2016 2413 2.433664 GTAAGGCGACACCCGTGG 60.434 66.667 0.00 0.00 40.58 4.94
2017 2414 2.433664 GGTAAGGCGACACCCGTG 60.434 66.667 0.00 0.00 40.58 4.94
2018 2415 1.761500 AAAGGTAAGGCGACACCCGT 61.761 55.000 0.00 0.00 40.58 5.28
2019 2416 1.004200 AAAGGTAAGGCGACACCCG 60.004 57.895 0.00 0.00 40.58 5.28
2020 2417 0.675837 GGAAAGGTAAGGCGACACCC 60.676 60.000 0.00 0.00 40.58 4.61
2021 2418 0.675837 GGGAAAGGTAAGGCGACACC 60.676 60.000 0.00 0.00 39.61 4.16
2022 2419 0.675837 GGGGAAAGGTAAGGCGACAC 60.676 60.000 0.00 0.00 0.00 3.67
2023 2420 1.681076 GGGGAAAGGTAAGGCGACA 59.319 57.895 0.00 0.00 0.00 4.35
2024 2421 1.449070 CGGGGAAAGGTAAGGCGAC 60.449 63.158 0.00 0.00 0.00 5.19
2025 2422 2.662070 CCGGGGAAAGGTAAGGCGA 61.662 63.158 0.00 0.00 0.00 5.54
2026 2423 2.124860 CCGGGGAAAGGTAAGGCG 60.125 66.667 0.00 0.00 0.00 5.52
2027 2424 2.274432 CCCGGGGAAAGGTAAGGC 59.726 66.667 14.71 0.00 0.00 4.35
2028 2425 1.605992 GTCCCGGGGAAAGGTAAGG 59.394 63.158 23.50 0.00 31.38 2.69
2029 2426 1.605992 GGTCCCGGGGAAAGGTAAG 59.394 63.158 23.50 0.00 31.38 2.34
2030 2427 2.292559 CGGTCCCGGGGAAAGGTAA 61.293 63.158 23.50 0.00 31.38 2.85
2031 2428 2.684655 CGGTCCCGGGGAAAGGTA 60.685 66.667 23.50 0.00 31.38 3.08
2032 2429 4.968311 ACGGTCCCGGGGAAAGGT 62.968 66.667 23.50 13.02 44.69 3.50
2033 2430 3.200329 AAACGGTCCCGGGGAAAGG 62.200 63.158 23.50 12.34 44.69 3.11
2034 2431 1.969589 CAAACGGTCCCGGGGAAAG 60.970 63.158 23.50 16.90 44.69 2.62
2035 2432 2.113562 CAAACGGTCCCGGGGAAA 59.886 61.111 23.50 0.00 44.69 3.13
2036 2433 4.646877 GCAAACGGTCCCGGGGAA 62.647 66.667 23.50 0.00 44.69 3.97
2042 2439 2.852180 AAAAGGCGCAAACGGTCCC 61.852 57.895 10.83 0.00 40.57 4.46
2043 2440 1.660264 CAAAAGGCGCAAACGGTCC 60.660 57.895 10.83 0.00 40.57 4.46
2044 2441 1.660264 CCAAAAGGCGCAAACGGTC 60.660 57.895 10.83 0.00 40.57 4.79
2045 2442 2.415426 CCAAAAGGCGCAAACGGT 59.585 55.556 10.83 0.00 40.57 4.83
2046 2443 3.035503 GCCAAAAGGCGCAAACGG 61.036 61.111 10.83 3.45 40.57 4.44
2047 2444 2.279120 TGCCAAAAGGCGCAAACG 60.279 55.556 10.83 0.00 44.07 3.60
2048 2445 3.318875 GTGCCAAAAGGCGCAAAC 58.681 55.556 10.83 0.00 43.85 2.93
2052 2449 2.195123 ATACGTGTGCCAAAAGGCGC 62.195 55.000 12.80 12.80 44.56 6.53
2053 2450 1.080298 TATACGTGTGCCAAAAGGCG 58.920 50.000 0.00 0.00 37.77 5.52
2054 2451 2.680841 TCATATACGTGTGCCAAAAGGC 59.319 45.455 0.00 0.00 0.00 4.35
2055 2452 3.687212 TGTCATATACGTGTGCCAAAAGG 59.313 43.478 0.00 0.00 0.00 3.11
2056 2453 4.391830 ACTGTCATATACGTGTGCCAAAAG 59.608 41.667 0.00 0.00 0.00 2.27
2057 2454 4.153296 CACTGTCATATACGTGTGCCAAAA 59.847 41.667 0.00 0.00 31.56 2.44
2058 2455 3.682377 CACTGTCATATACGTGTGCCAAA 59.318 43.478 0.00 0.00 31.56 3.28
2059 2456 3.258228 CACTGTCATATACGTGTGCCAA 58.742 45.455 0.00 0.00 31.56 4.52
2060 2457 2.232696 ACACTGTCATATACGTGTGCCA 59.767 45.455 0.00 0.00 41.22 4.92
2061 2458 2.858344 GACACTGTCATATACGTGTGCC 59.142 50.000 0.00 0.00 42.11 5.01
2062 2459 2.530297 CGACACTGTCATATACGTGTGC 59.470 50.000 9.84 0.00 42.11 4.57
2063 2460 2.530297 GCGACACTGTCATATACGTGTG 59.470 50.000 9.84 0.00 42.11 3.82
2064 2461 2.422479 AGCGACACTGTCATATACGTGT 59.578 45.455 9.84 0.00 43.57 4.49
2065 2462 3.066369 AGCGACACTGTCATATACGTG 57.934 47.619 9.84 0.00 38.07 4.49
2066 2463 3.303857 GCTAGCGACACTGTCATATACGT 60.304 47.826 9.84 0.00 32.09 3.57
2067 2464 3.227147 GCTAGCGACACTGTCATATACG 58.773 50.000 9.84 0.00 32.09 3.06
2068 2465 4.224715 TGCTAGCGACACTGTCATATAC 57.775 45.455 10.77 0.00 32.09 1.47
2069 2466 4.082733 GGATGCTAGCGACACTGTCATATA 60.083 45.833 10.77 0.00 32.09 0.86
2070 2467 3.305676 GGATGCTAGCGACACTGTCATAT 60.306 47.826 10.77 0.00 32.09 1.78
2071 2468 2.034685 GGATGCTAGCGACACTGTCATA 59.965 50.000 10.77 1.24 32.09 2.15
2072 2469 1.202463 GGATGCTAGCGACACTGTCAT 60.202 52.381 10.77 0.00 32.09 3.06
2073 2470 0.173481 GGATGCTAGCGACACTGTCA 59.827 55.000 10.77 0.00 32.09 3.58
2074 2471 0.173481 TGGATGCTAGCGACACTGTC 59.827 55.000 10.77 0.00 0.00 3.51
2075 2472 0.826715 ATGGATGCTAGCGACACTGT 59.173 50.000 10.77 0.00 0.00 3.55
2076 2473 2.800881 TATGGATGCTAGCGACACTG 57.199 50.000 10.77 0.00 0.00 3.66
2077 2474 2.893489 TCATATGGATGCTAGCGACACT 59.107 45.455 10.77 0.00 32.62 3.55
2078 2475 3.303881 TCATATGGATGCTAGCGACAC 57.696 47.619 10.77 0.81 32.62 3.67
2079 2476 5.394553 CCTTATCATATGGATGCTAGCGACA 60.395 44.000 10.77 9.20 36.72 4.35
2080 2477 5.046529 CCTTATCATATGGATGCTAGCGAC 58.953 45.833 10.77 6.33 36.72 5.19
2081 2478 4.956075 TCCTTATCATATGGATGCTAGCGA 59.044 41.667 10.77 0.00 36.72 4.93
2082 2479 5.268118 TCCTTATCATATGGATGCTAGCG 57.732 43.478 10.77 0.00 36.72 4.26
2083 2480 5.055812 GCTCCTTATCATATGGATGCTAGC 58.944 45.833 8.10 8.10 36.72 3.42
2084 2481 5.454471 GGGCTCCTTATCATATGGATGCTAG 60.454 48.000 2.13 0.00 36.72 3.42
2085 2482 4.410228 GGGCTCCTTATCATATGGATGCTA 59.590 45.833 2.13 0.00 36.72 3.49
2086 2483 3.201708 GGGCTCCTTATCATATGGATGCT 59.798 47.826 2.13 0.00 36.72 3.79
2087 2484 3.549794 GGGCTCCTTATCATATGGATGC 58.450 50.000 2.13 6.23 36.72 3.91
2088 2485 3.432749 CCGGGCTCCTTATCATATGGATG 60.433 52.174 2.13 0.00 36.72 3.51
2089 2486 2.774234 CCGGGCTCCTTATCATATGGAT 59.226 50.000 2.13 0.00 40.14 3.41
2090 2487 2.187958 CCGGGCTCCTTATCATATGGA 58.812 52.381 2.13 0.00 0.00 3.41
2091 2488 1.210478 CCCGGGCTCCTTATCATATGG 59.790 57.143 8.08 0.00 0.00 2.74
2092 2489 1.407437 GCCCGGGCTCCTTATCATATG 60.407 57.143 38.76 0.00 38.26 1.78
2093 2490 0.912486 GCCCGGGCTCCTTATCATAT 59.088 55.000 38.76 0.00 38.26 1.78
2094 2491 2.372852 GCCCGGGCTCCTTATCATA 58.627 57.895 38.76 0.00 38.26 2.15
2095 2492 3.161557 GCCCGGGCTCCTTATCAT 58.838 61.111 38.76 0.00 38.26 2.45
2106 2503 3.466791 CTAGCCATGTCAGCCCGGG 62.467 68.421 19.09 19.09 0.00 5.73
2107 2504 2.109799 CTAGCCATGTCAGCCCGG 59.890 66.667 0.00 0.00 0.00 5.73
2108 2505 1.227380 GACTAGCCATGTCAGCCCG 60.227 63.158 0.00 0.00 34.80 6.13
2109 2506 1.227380 CGACTAGCCATGTCAGCCC 60.227 63.158 0.00 0.00 34.37 5.19
2110 2507 0.744874 TACGACTAGCCATGTCAGCC 59.255 55.000 0.00 0.00 34.37 4.85
2111 2508 2.579207 TTACGACTAGCCATGTCAGC 57.421 50.000 0.00 0.00 34.37 4.26
2112 2509 3.187700 GGTTTACGACTAGCCATGTCAG 58.812 50.000 0.00 0.00 34.37 3.51
2113 2510 2.093869 GGGTTTACGACTAGCCATGTCA 60.094 50.000 0.00 0.00 34.37 3.58
2114 2511 2.093869 TGGGTTTACGACTAGCCATGTC 60.094 50.000 0.00 0.00 37.03 3.06
2115 2512 1.903860 TGGGTTTACGACTAGCCATGT 59.096 47.619 0.00 0.00 37.03 3.21
2116 2513 2.684001 TGGGTTTACGACTAGCCATG 57.316 50.000 0.00 0.00 37.03 3.66
2117 2514 3.008704 ACTTTGGGTTTACGACTAGCCAT 59.991 43.478 7.05 0.00 41.19 4.40
2118 2515 2.369532 ACTTTGGGTTTACGACTAGCCA 59.630 45.455 0.00 0.00 39.97 4.75
2119 2516 2.740447 CACTTTGGGTTTACGACTAGCC 59.260 50.000 0.00 0.00 0.00 3.93
2120 2517 2.740447 CCACTTTGGGTTTACGACTAGC 59.260 50.000 0.00 0.00 32.67 3.42
2121 2518 2.740447 GCCACTTTGGGTTTACGACTAG 59.260 50.000 0.00 0.00 38.19 2.57
2122 2519 2.104451 TGCCACTTTGGGTTTACGACTA 59.896 45.455 0.00 0.00 38.19 2.59
2123 2520 1.134037 TGCCACTTTGGGTTTACGACT 60.134 47.619 0.00 0.00 38.19 4.18
2124 2521 1.002142 GTGCCACTTTGGGTTTACGAC 60.002 52.381 0.00 0.00 38.19 4.34
2125 2522 1.310904 GTGCCACTTTGGGTTTACGA 58.689 50.000 0.00 0.00 38.19 3.43
2126 2523 1.001815 CTGTGCCACTTTGGGTTTACG 60.002 52.381 0.00 0.00 38.19 3.18
2127 2524 2.034179 GTCTGTGCCACTTTGGGTTTAC 59.966 50.000 0.00 0.00 38.19 2.01
2128 2525 2.092103 AGTCTGTGCCACTTTGGGTTTA 60.092 45.455 0.00 0.00 38.19 2.01
2129 2526 1.111277 GTCTGTGCCACTTTGGGTTT 58.889 50.000 0.00 0.00 38.19 3.27
2130 2527 0.258774 AGTCTGTGCCACTTTGGGTT 59.741 50.000 0.00 0.00 38.19 4.11
2131 2528 0.258774 AAGTCTGTGCCACTTTGGGT 59.741 50.000 0.00 0.00 38.19 4.51
2132 2529 1.880027 GTAAGTCTGTGCCACTTTGGG 59.120 52.381 0.00 0.00 38.19 4.12
2133 2530 2.549754 CTGTAAGTCTGTGCCACTTTGG 59.450 50.000 0.00 0.00 41.55 3.28
2134 2531 2.549754 CCTGTAAGTCTGTGCCACTTTG 59.450 50.000 0.00 0.00 35.63 2.77
2135 2532 2.487265 CCCTGTAAGTCTGTGCCACTTT 60.487 50.000 0.00 0.00 35.63 2.66
2136 2533 1.072331 CCCTGTAAGTCTGTGCCACTT 59.928 52.381 0.00 0.00 37.80 3.16
2137 2534 0.687354 CCCTGTAAGTCTGTGCCACT 59.313 55.000 0.00 0.00 0.00 4.00
2138 2535 0.685097 TCCCTGTAAGTCTGTGCCAC 59.315 55.000 0.00 0.00 0.00 5.01
2139 2536 0.685097 GTCCCTGTAAGTCTGTGCCA 59.315 55.000 0.00 0.00 0.00 4.92
2140 2537 0.685097 TGTCCCTGTAAGTCTGTGCC 59.315 55.000 0.00 0.00 0.00 5.01
2141 2538 1.338200 CCTGTCCCTGTAAGTCTGTGC 60.338 57.143 0.00 0.00 0.00 4.57
2142 2539 1.338200 GCCTGTCCCTGTAAGTCTGTG 60.338 57.143 0.00 0.00 0.00 3.66
2143 2540 0.977395 GCCTGTCCCTGTAAGTCTGT 59.023 55.000 0.00 0.00 0.00 3.41
2144 2541 0.976641 TGCCTGTCCCTGTAAGTCTG 59.023 55.000 0.00 0.00 0.00 3.51
2145 2542 1.834263 GATGCCTGTCCCTGTAAGTCT 59.166 52.381 0.00 0.00 0.00 3.24
2146 2543 1.134371 GGATGCCTGTCCCTGTAAGTC 60.134 57.143 0.00 0.00 31.82 3.01
2147 2544 0.912486 GGATGCCTGTCCCTGTAAGT 59.088 55.000 0.00 0.00 31.82 2.24
2148 2545 0.911769 TGGATGCCTGTCCCTGTAAG 59.088 55.000 0.00 0.00 37.48 2.34
2149 2546 1.212688 CATGGATGCCTGTCCCTGTAA 59.787 52.381 0.00 0.00 37.48 2.41
2150 2547 0.839277 CATGGATGCCTGTCCCTGTA 59.161 55.000 0.00 0.00 37.48 2.74
2151 2548 0.915872 TCATGGATGCCTGTCCCTGT 60.916 55.000 0.00 0.00 37.48 4.00
2152 2549 0.465097 GTCATGGATGCCTGTCCCTG 60.465 60.000 0.00 0.00 37.48 4.45
2153 2550 1.639635 GGTCATGGATGCCTGTCCCT 61.640 60.000 0.00 0.00 37.48 4.20
2154 2551 1.152881 GGTCATGGATGCCTGTCCC 60.153 63.158 0.00 0.00 37.48 4.46
2155 2552 1.152881 GGGTCATGGATGCCTGTCC 60.153 63.158 0.00 0.00 38.81 4.02
2156 2553 0.465097 CTGGGTCATGGATGCCTGTC 60.465 60.000 0.00 0.00 0.00 3.51
2157 2554 1.611419 CTGGGTCATGGATGCCTGT 59.389 57.895 0.00 0.00 0.00 4.00
2158 2555 1.826921 GCTGGGTCATGGATGCCTG 60.827 63.158 0.00 0.00 0.00 4.85
2159 2556 1.652187 ATGCTGGGTCATGGATGCCT 61.652 55.000 0.00 0.00 0.00 4.75
2160 2557 1.152610 ATGCTGGGTCATGGATGCC 60.153 57.895 0.00 0.00 0.00 4.40
2161 2558 1.512996 CGATGCTGGGTCATGGATGC 61.513 60.000 0.00 0.00 0.00 3.91
2162 2559 0.107268 TCGATGCTGGGTCATGGATG 59.893 55.000 0.00 0.00 0.00 3.51
2163 2560 0.839277 TTCGATGCTGGGTCATGGAT 59.161 50.000 0.00 0.00 32.57 3.41
2164 2561 0.107703 GTTCGATGCTGGGTCATGGA 60.108 55.000 0.00 0.00 30.93 3.41
2165 2562 1.431488 CGTTCGATGCTGGGTCATGG 61.431 60.000 0.00 0.00 0.00 3.66
2166 2563 0.740868 ACGTTCGATGCTGGGTCATG 60.741 55.000 0.00 0.00 0.00 3.07
2167 2564 0.740868 CACGTTCGATGCTGGGTCAT 60.741 55.000 0.00 0.00 0.00 3.06
2168 2565 1.374125 CACGTTCGATGCTGGGTCA 60.374 57.895 0.00 0.00 0.00 4.02
2169 2566 1.352156 GACACGTTCGATGCTGGGTC 61.352 60.000 0.00 0.00 0.00 4.46
2170 2567 1.374252 GACACGTTCGATGCTGGGT 60.374 57.895 0.00 0.00 0.00 4.51
2171 2568 3.474806 GACACGTTCGATGCTGGG 58.525 61.111 0.00 0.00 0.00 4.45
2180 2577 1.674611 CGCTGATGACCGACACGTTC 61.675 60.000 0.00 0.00 0.00 3.95
2181 2578 1.733041 CGCTGATGACCGACACGTT 60.733 57.895 0.00 0.00 0.00 3.99
2182 2579 2.126463 CGCTGATGACCGACACGT 60.126 61.111 0.00 0.00 0.00 4.49
2183 2580 1.869574 CTCGCTGATGACCGACACG 60.870 63.158 0.00 0.00 0.00 4.49
2184 2581 1.073216 CACTCGCTGATGACCGACAC 61.073 60.000 0.00 0.00 0.00 3.67
2185 2582 1.212751 CACTCGCTGATGACCGACA 59.787 57.895 0.00 0.00 0.00 4.35
2186 2583 0.109272 TTCACTCGCTGATGACCGAC 60.109 55.000 0.00 0.00 0.00 4.79
2187 2584 0.817654 ATTCACTCGCTGATGACCGA 59.182 50.000 0.00 0.00 0.00 4.69
2188 2585 1.203928 GATTCACTCGCTGATGACCG 58.796 55.000 0.00 0.00 0.00 4.79
2189 2586 1.134699 TGGATTCACTCGCTGATGACC 60.135 52.381 0.00 0.00 0.00 4.02
2190 2587 2.200067 CTGGATTCACTCGCTGATGAC 58.800 52.381 0.00 0.00 0.00 3.06
2191 2588 1.137675 CCTGGATTCACTCGCTGATGA 59.862 52.381 0.00 0.00 0.00 2.92
2192 2589 1.579698 CCTGGATTCACTCGCTGATG 58.420 55.000 0.00 0.00 0.00 3.07
2193 2590 0.179062 GCCTGGATTCACTCGCTGAT 60.179 55.000 0.00 0.00 0.00 2.90
2194 2591 1.219124 GCCTGGATTCACTCGCTGA 59.781 57.895 0.00 0.00 0.00 4.26
2195 2592 1.088340 CAGCCTGGATTCACTCGCTG 61.088 60.000 0.00 0.00 37.93 5.18
2196 2593 1.220206 CAGCCTGGATTCACTCGCT 59.780 57.895 0.00 0.00 0.00 4.93
2197 2594 0.175760 TACAGCCTGGATTCACTCGC 59.824 55.000 0.00 0.00 0.00 5.03
2198 2595 1.804372 GCTACAGCCTGGATTCACTCG 60.804 57.143 0.00 0.00 34.31 4.18
2199 2596 1.208052 TGCTACAGCCTGGATTCACTC 59.792 52.381 0.00 0.00 41.18 3.51
2200 2597 1.065854 GTGCTACAGCCTGGATTCACT 60.066 52.381 0.00 0.00 41.18 3.41
2201 2598 1.065854 AGTGCTACAGCCTGGATTCAC 60.066 52.381 0.00 0.00 41.18 3.18
2202 2599 1.065926 CAGTGCTACAGCCTGGATTCA 60.066 52.381 0.00 0.00 41.18 2.57
2203 2600 1.661341 CAGTGCTACAGCCTGGATTC 58.339 55.000 0.00 0.00 41.18 2.52
2204 2601 3.869623 CAGTGCTACAGCCTGGATT 57.130 52.632 0.00 0.00 41.18 3.01
2208 2605 2.437359 GCCCAGTGCTACAGCCTG 60.437 66.667 10.84 10.84 41.18 4.85
2217 2614 2.124942 GTCCTGCTAGCCCAGTGC 60.125 66.667 13.29 0.00 41.71 4.40
2218 2615 1.519719 GAGTCCTGCTAGCCCAGTG 59.480 63.158 13.29 0.00 0.00 3.66
2219 2616 1.687493 GGAGTCCTGCTAGCCCAGT 60.687 63.158 13.29 0.00 0.00 4.00
2220 2617 2.790791 CGGAGTCCTGCTAGCCCAG 61.791 68.421 13.29 3.40 0.00 4.45
2221 2618 2.759973 CGGAGTCCTGCTAGCCCA 60.760 66.667 13.29 0.00 0.00 5.36
2222 2619 3.541713 CCGGAGTCCTGCTAGCCC 61.542 72.222 13.29 3.65 0.00 5.19
2223 2620 2.760385 ACCGGAGTCCTGCTAGCC 60.760 66.667 9.46 0.00 0.00 3.93
2224 2621 1.605058 TTCACCGGAGTCCTGCTAGC 61.605 60.000 9.46 8.10 0.00 3.42
2225 2622 0.173708 GTTCACCGGAGTCCTGCTAG 59.826 60.000 9.46 0.00 0.00 3.42
2226 2623 1.255667 GGTTCACCGGAGTCCTGCTA 61.256 60.000 9.46 0.00 0.00 3.49
2227 2624 2.584391 GGTTCACCGGAGTCCTGCT 61.584 63.158 9.46 0.00 0.00 4.24
2228 2625 2.047179 GGTTCACCGGAGTCCTGC 60.047 66.667 9.46 0.00 0.00 4.85
2238 2635 2.436115 GCTACAGCCCGGTTCACC 60.436 66.667 0.00 0.00 34.31 4.02
2239 2636 2.813908 CGCTACAGCCCGGTTCAC 60.814 66.667 0.00 0.00 37.91 3.18
2240 2637 4.077184 CCGCTACAGCCCGGTTCA 62.077 66.667 0.00 0.00 39.67 3.18
2241 2638 4.832608 CCCGCTACAGCCCGGTTC 62.833 72.222 0.00 0.00 42.87 3.62
2245 2642 3.845259 TTAGCCCGCTACAGCCCG 61.845 66.667 0.00 0.00 37.91 6.13
2246 2643 2.203029 GTTAGCCCGCTACAGCCC 60.203 66.667 0.00 0.00 37.91 5.19
2247 2644 1.521681 CTGTTAGCCCGCTACAGCC 60.522 63.158 11.00 0.00 37.91 4.85
2248 2645 1.521681 CCTGTTAGCCCGCTACAGC 60.522 63.158 15.21 0.00 32.04 4.40
2249 2646 0.179108 GTCCTGTTAGCCCGCTACAG 60.179 60.000 14.33 14.33 32.60 2.74
2250 2647 0.613853 AGTCCTGTTAGCCCGCTACA 60.614 55.000 0.00 0.00 0.00 2.74
2251 2648 0.102663 GAGTCCTGTTAGCCCGCTAC 59.897 60.000 0.00 0.00 0.00 3.58
2252 2649 1.041447 GGAGTCCTGTTAGCCCGCTA 61.041 60.000 0.41 0.00 0.00 4.26
2253 2650 2.359967 GGAGTCCTGTTAGCCCGCT 61.360 63.158 0.41 0.00 0.00 5.52
2254 2651 2.187163 GGAGTCCTGTTAGCCCGC 59.813 66.667 0.41 0.00 0.00 6.13
2255 2652 2.494918 CGGAGTCCTGTTAGCCCG 59.505 66.667 7.77 0.00 0.00 6.13
2256 2653 0.685458 TACCGGAGTCCTGTTAGCCC 60.685 60.000 9.46 0.00 0.00 5.19
2257 2654 1.411041 ATACCGGAGTCCTGTTAGCC 58.589 55.000 9.46 0.00 0.00 3.93
2258 2655 2.429610 TGAATACCGGAGTCCTGTTAGC 59.570 50.000 9.46 2.56 0.00 3.09
2259 2656 4.556898 CGATGAATACCGGAGTCCTGTTAG 60.557 50.000 9.46 0.00 0.00 2.34
2260 2657 3.317149 CGATGAATACCGGAGTCCTGTTA 59.683 47.826 9.46 0.00 0.00 2.41
2261 2658 2.100916 CGATGAATACCGGAGTCCTGTT 59.899 50.000 9.46 0.00 0.00 3.16
2262 2659 1.681793 CGATGAATACCGGAGTCCTGT 59.318 52.381 9.46 11.33 0.00 4.00
2263 2660 1.603172 GCGATGAATACCGGAGTCCTG 60.603 57.143 9.46 2.81 0.00 3.86
2264 2661 0.674534 GCGATGAATACCGGAGTCCT 59.325 55.000 9.46 0.00 0.00 3.85
2265 2662 0.663568 CGCGATGAATACCGGAGTCC 60.664 60.000 9.46 0.00 0.00 3.85
2266 2663 0.030369 ACGCGATGAATACCGGAGTC 59.970 55.000 15.93 2.16 0.00 3.36
2267 2664 0.248907 CACGCGATGAATACCGGAGT 60.249 55.000 15.93 0.00 0.00 3.85
2268 2665 0.030235 TCACGCGATGAATACCGGAG 59.970 55.000 15.93 0.00 33.02 4.63
2269 2666 0.248743 GTCACGCGATGAATACCGGA 60.249 55.000 15.93 0.00 39.72 5.14
2270 2667 0.526739 TGTCACGCGATGAATACCGG 60.527 55.000 15.93 0.00 39.72 5.28
2271 2668 1.487482 ATGTCACGCGATGAATACCG 58.513 50.000 15.93 0.00 39.72 4.02
2272 2669 3.303132 GGAAATGTCACGCGATGAATACC 60.303 47.826 15.93 8.95 39.72 2.73
2273 2670 3.303132 GGGAAATGTCACGCGATGAATAC 60.303 47.826 15.93 2.71 39.72 1.89
2274 2671 2.869801 GGGAAATGTCACGCGATGAATA 59.130 45.455 15.93 6.26 39.72 1.75
2275 2672 1.670811 GGGAAATGTCACGCGATGAAT 59.329 47.619 15.93 6.80 39.72 2.57
2276 2673 1.083489 GGGAAATGTCACGCGATGAA 58.917 50.000 15.93 4.77 39.72 2.57
2277 2674 0.742990 GGGGAAATGTCACGCGATGA 60.743 55.000 15.93 10.48 33.79 2.92
2278 2675 1.721487 GGGGAAATGTCACGCGATG 59.279 57.895 15.93 7.85 0.00 3.84
2279 2676 1.813753 CGGGGAAATGTCACGCGAT 60.814 57.895 15.93 0.00 42.18 4.58
2280 2677 2.433491 CGGGGAAATGTCACGCGA 60.433 61.111 15.93 0.00 42.18 5.87
2281 2678 1.966493 CTTCGGGGAAATGTCACGCG 61.966 60.000 3.53 3.53 41.16 6.01
2282 2679 1.644786 CCTTCGGGGAAATGTCACGC 61.645 60.000 0.00 0.00 37.23 5.34
2283 2680 2.466867 CCTTCGGGGAAATGTCACG 58.533 57.895 0.00 0.00 37.23 4.35
2294 2691 1.293498 CTGTGTCTGTCCCTTCGGG 59.707 63.158 0.00 0.00 46.11 5.14
2295 2692 1.185618 TCCTGTGTCTGTCCCTTCGG 61.186 60.000 0.00 0.00 0.00 4.30
2296 2693 0.679505 TTCCTGTGTCTGTCCCTTCG 59.320 55.000 0.00 0.00 0.00 3.79
2297 2694 1.605712 CGTTCCTGTGTCTGTCCCTTC 60.606 57.143 0.00 0.00 0.00 3.46
2298 2695 0.393077 CGTTCCTGTGTCTGTCCCTT 59.607 55.000 0.00 0.00 0.00 3.95
2299 2696 0.469331 TCGTTCCTGTGTCTGTCCCT 60.469 55.000 0.00 0.00 0.00 4.20
2300 2697 0.391597 TTCGTTCCTGTGTCTGTCCC 59.608 55.000 0.00 0.00 0.00 4.46
2301 2698 1.340248 TCTTCGTTCCTGTGTCTGTCC 59.660 52.381 0.00 0.00 0.00 4.02
2302 2699 2.795175 TCTTCGTTCCTGTGTCTGTC 57.205 50.000 0.00 0.00 0.00 3.51
2303 2700 2.224066 CCTTCTTCGTTCCTGTGTCTGT 60.224 50.000 0.00 0.00 0.00 3.41
2304 2701 2.035961 TCCTTCTTCGTTCCTGTGTCTG 59.964 50.000 0.00 0.00 0.00 3.51
2305 2702 2.036089 GTCCTTCTTCGTTCCTGTGTCT 59.964 50.000 0.00 0.00 0.00 3.41
2306 2703 2.223971 TGTCCTTCTTCGTTCCTGTGTC 60.224 50.000 0.00 0.00 0.00 3.67
2307 2704 1.760613 TGTCCTTCTTCGTTCCTGTGT 59.239 47.619 0.00 0.00 0.00 3.72
2308 2705 2.135933 GTGTCCTTCTTCGTTCCTGTG 58.864 52.381 0.00 0.00 0.00 3.66
2309 2706 1.760613 TGTGTCCTTCTTCGTTCCTGT 59.239 47.619 0.00 0.00 0.00 4.00
2310 2707 2.526304 TGTGTCCTTCTTCGTTCCTG 57.474 50.000 0.00 0.00 0.00 3.86
2311 2708 2.872038 GCATGTGTCCTTCTTCGTTCCT 60.872 50.000 0.00 0.00 0.00 3.36
2312 2709 1.464997 GCATGTGTCCTTCTTCGTTCC 59.535 52.381 0.00 0.00 0.00 3.62
2313 2710 1.464997 GGCATGTGTCCTTCTTCGTTC 59.535 52.381 0.00 0.00 0.00 3.95
2314 2711 1.523758 GGCATGTGTCCTTCTTCGTT 58.476 50.000 0.00 0.00 0.00 3.85
2315 2712 0.670546 CGGCATGTGTCCTTCTTCGT 60.671 55.000 0.00 0.00 0.00 3.85
2316 2713 1.361668 CCGGCATGTGTCCTTCTTCG 61.362 60.000 0.00 0.00 0.00 3.79
2317 2714 1.648467 GCCGGCATGTGTCCTTCTTC 61.648 60.000 24.80 0.00 0.00 2.87
2318 2715 1.675641 GCCGGCATGTGTCCTTCTT 60.676 57.895 24.80 0.00 0.00 2.52
2319 2716 2.045926 GCCGGCATGTGTCCTTCT 60.046 61.111 24.80 0.00 0.00 2.85
2320 2717 3.134127 GGCCGGCATGTGTCCTTC 61.134 66.667 30.85 1.84 0.00 3.46
2321 2718 3.925630 CTGGCCGGCATGTGTCCTT 62.926 63.158 30.85 0.00 0.00 3.36
2322 2719 4.415150 CTGGCCGGCATGTGTCCT 62.415 66.667 30.85 0.00 0.00 3.85
2326 2723 3.993614 TTAGGCTGGCCGGCATGTG 62.994 63.158 36.64 15.45 41.95 3.21
2327 2724 3.704231 CTTAGGCTGGCCGGCATGT 62.704 63.158 36.64 22.72 41.95 3.21
2328 2725 2.903855 CTTAGGCTGGCCGGCATG 60.904 66.667 36.64 20.85 41.95 4.06
2329 2726 3.411517 ACTTAGGCTGGCCGGCAT 61.412 61.111 36.64 32.95 41.95 4.40
2330 2727 4.408821 CACTTAGGCTGGCCGGCA 62.409 66.667 36.64 16.24 41.95 5.69
2331 2728 3.920093 AACACTTAGGCTGGCCGGC 62.920 63.158 29.49 29.49 41.95 6.13
2332 2729 1.745489 GAACACTTAGGCTGGCCGG 60.745 63.158 7.41 7.41 41.95 6.13
2333 2730 1.745489 GGAACACTTAGGCTGGCCG 60.745 63.158 5.93 0.00 41.95 6.13
2334 2731 1.745489 CGGAACACTTAGGCTGGCC 60.745 63.158 3.00 3.00 0.00 5.36
2335 2732 1.745489 CCGGAACACTTAGGCTGGC 60.745 63.158 0.00 0.00 0.00 4.85
2336 2733 0.108138 CTCCGGAACACTTAGGCTGG 60.108 60.000 5.23 0.00 0.00 4.85
2337 2734 0.741221 GCTCCGGAACACTTAGGCTG 60.741 60.000 5.23 0.00 0.00 4.85
2338 2735 1.192146 TGCTCCGGAACACTTAGGCT 61.192 55.000 5.23 0.00 0.00 4.58
2339 2736 0.741221 CTGCTCCGGAACACTTAGGC 60.741 60.000 5.23 2.94 0.00 3.93
2340 2737 0.608640 ACTGCTCCGGAACACTTAGG 59.391 55.000 5.23 0.00 0.00 2.69
2341 2738 2.735762 GCTACTGCTCCGGAACACTTAG 60.736 54.545 5.23 9.70 36.03 2.18
2342 2739 1.203994 GCTACTGCTCCGGAACACTTA 59.796 52.381 5.23 0.00 36.03 2.24
2343 2740 0.037232 GCTACTGCTCCGGAACACTT 60.037 55.000 5.23 0.00 36.03 3.16
2344 2741 1.185618 TGCTACTGCTCCGGAACACT 61.186 55.000 5.23 0.00 40.48 3.55
2345 2742 0.320421 TTGCTACTGCTCCGGAACAC 60.320 55.000 5.23 0.00 40.48 3.32
2346 2743 0.037326 CTTGCTACTGCTCCGGAACA 60.037 55.000 5.23 6.47 40.48 3.18
2347 2744 1.362406 GCTTGCTACTGCTCCGGAAC 61.362 60.000 5.23 0.16 40.48 3.62
2348 2745 1.079127 GCTTGCTACTGCTCCGGAA 60.079 57.895 5.23 0.00 40.48 4.30
2349 2746 0.683179 TAGCTTGCTACTGCTCCGGA 60.683 55.000 2.93 2.93 40.35 5.14
2350 2747 0.528684 GTAGCTTGCTACTGCTCCGG 60.529 60.000 21.42 0.00 40.35 5.14
2351 2748 0.528684 GGTAGCTTGCTACTGCTCCG 60.529 60.000 25.69 0.00 40.35 4.63
2352 2749 0.537188 TGGTAGCTTGCTACTGCTCC 59.463 55.000 25.69 13.70 40.35 4.70
2353 2750 2.208431 CATGGTAGCTTGCTACTGCTC 58.792 52.381 25.69 13.69 40.35 4.26
2354 2751 1.134280 CCATGGTAGCTTGCTACTGCT 60.134 52.381 25.69 12.33 42.67 4.24
2355 2752 1.303309 CCATGGTAGCTTGCTACTGC 58.697 55.000 25.69 14.55 40.20 4.40
2356 2753 1.134280 AGCCATGGTAGCTTGCTACTG 60.134 52.381 25.69 18.73 37.24 2.74
2357 2754 1.139853 GAGCCATGGTAGCTTGCTACT 59.860 52.381 25.69 10.26 41.75 2.57
2358 2755 1.134401 TGAGCCATGGTAGCTTGCTAC 60.134 52.381 20.79 20.79 41.75 3.58
2359 2756 1.139654 CTGAGCCATGGTAGCTTGCTA 59.860 52.381 14.67 0.00 41.75 3.49
2360 2757 0.107312 CTGAGCCATGGTAGCTTGCT 60.107 55.000 14.67 1.29 41.75 3.91
2361 2758 0.393537 ACTGAGCCATGGTAGCTTGC 60.394 55.000 14.67 0.00 41.75 4.01
2362 2759 1.376543 CACTGAGCCATGGTAGCTTG 58.623 55.000 14.67 2.00 41.75 4.01
2363 2760 0.254178 CCACTGAGCCATGGTAGCTT 59.746 55.000 14.67 0.00 41.75 3.74
2364 2761 0.618680 TCCACTGAGCCATGGTAGCT 60.619 55.000 14.67 3.82 45.23 3.32
2365 2762 0.253044 TTCCACTGAGCCATGGTAGC 59.747 55.000 14.67 3.61 37.27 3.58
2366 2763 2.290260 TGTTTCCACTGAGCCATGGTAG 60.290 50.000 14.67 11.95 37.27 3.18
2367 2764 1.702401 TGTTTCCACTGAGCCATGGTA 59.298 47.619 14.67 0.00 37.27 3.25
2368 2765 0.478072 TGTTTCCACTGAGCCATGGT 59.522 50.000 14.67 0.00 37.27 3.55
2369 2766 0.883833 GTGTTTCCACTGAGCCATGG 59.116 55.000 7.63 7.63 38.61 3.66
2378 2775 8.435233 GGGAAATGTCTCCTAGTGTTTCCACT 62.435 46.154 14.42 2.59 43.87 4.00
2379 2776 4.695928 GGAAATGTCTCCTAGTGTTTCCAC 59.304 45.833 9.19 0.00 42.44 4.02
2380 2777 4.263331 GGGAAATGTCTCCTAGTGTTTCCA 60.263 45.833 14.42 0.00 43.87 3.53
2381 2778 4.262617 GGGAAATGTCTCCTAGTGTTTCC 58.737 47.826 6.21 6.21 42.26 3.13
2382 2779 3.933332 CGGGAAATGTCTCCTAGTGTTTC 59.067 47.826 0.00 0.00 35.63 2.78
2383 2780 3.307480 CCGGGAAATGTCTCCTAGTGTTT 60.307 47.826 0.00 0.00 35.63 2.83
2384 2781 2.236395 CCGGGAAATGTCTCCTAGTGTT 59.764 50.000 0.00 0.00 35.63 3.32
2385 2782 1.831736 CCGGGAAATGTCTCCTAGTGT 59.168 52.381 0.00 0.00 35.63 3.55
2386 2783 1.831736 ACCGGGAAATGTCTCCTAGTG 59.168 52.381 6.32 0.00 35.63 2.74
2387 2784 2.249309 ACCGGGAAATGTCTCCTAGT 57.751 50.000 6.32 0.00 35.63 2.57
2388 2785 3.958798 TCTTACCGGGAAATGTCTCCTAG 59.041 47.826 6.32 0.00 35.63 3.02
2389 2786 3.958798 CTCTTACCGGGAAATGTCTCCTA 59.041 47.826 6.32 0.00 35.63 2.94
2390 2787 2.766828 CTCTTACCGGGAAATGTCTCCT 59.233 50.000 6.32 0.00 35.63 3.69
2391 2788 3.180891 CTCTTACCGGGAAATGTCTCC 57.819 52.381 6.32 0.00 34.41 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.