Multiple sequence alignment - TraesCS2A01G403200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G403200 chr2A 100.000 8491 0 0 1 8491 657817298 657808808 0.000000e+00 15681
1 TraesCS2A01G403200 chr2D 95.987 7426 151 49 609 7968 513768048 513760704 0.000000e+00 11926
2 TraesCS2A01G403200 chr2B 95.499 7420 168 60 622 7968 605384351 605377025 0.000000e+00 11699
3 TraesCS2A01G403200 chr7B 98.872 532 5 1 7961 8491 122844006 122843475 0.000000e+00 948
4 TraesCS2A01G403200 chr6B 98.672 527 7 0 7965 8491 250789078 250789604 0.000000e+00 935
5 TraesCS2A01G403200 chr6B 96.145 415 15 1 3654 4068 487835474 487835061 0.000000e+00 676
6 TraesCS2A01G403200 chr6B 72.420 1037 177 65 6282 7286 487830725 487829766 6.630000e-56 230
7 TraesCS2A01G403200 chr3B 95.793 523 18 3 7966 8486 187519306 187518786 0.000000e+00 841
8 TraesCS2A01G403200 chr3B 90.864 405 33 3 8056 8456 6978781 6978377 2.700000e-149 540
9 TraesCS2A01G403200 chr3B 92.632 95 6 1 7965 8058 6978936 6978842 1.490000e-27 135
10 TraesCS2A01G403200 chr6D 96.814 408 13 0 3654 4061 332499020 332499427 0.000000e+00 682
11 TraesCS2A01G403200 chr6D 71.842 1243 208 79 6282 7486 332503488 332504626 8.580000e-55 226
12 TraesCS2A01G403200 chr6A 96.577 409 12 2 3654 4061 471800551 471800958 0.000000e+00 676
13 TraesCS2A01G403200 chr6A 72.106 1244 203 78 6282 7486 471805393 471806531 8.520000e-60 243
14 TraesCS2A01G403200 chr6A 94.737 95 4 1 7964 8058 551261079 551260986 6.870000e-31 147
15 TraesCS2A01G403200 chr5B 92.326 417 28 2 3654 4069 538542404 538542817 2.640000e-164 590
16 TraesCS2A01G403200 chr5B 89.974 379 31 4 8070 8441 123435787 123435409 4.610000e-132 483
17 TraesCS2A01G403200 chr5B 88.175 389 38 5 8070 8451 123217738 123217351 2.790000e-124 457
18 TraesCS2A01G403200 chr5B 90.909 77 7 0 6282 6358 538547308 538547384 4.190000e-18 104
19 TraesCS2A01G403200 chr5D 93.035 402 25 1 3654 4055 442331797 442332195 1.230000e-162 584
20 TraesCS2A01G403200 chr5D 91.379 406 29 5 8059 8460 482147732 482148135 1.250000e-152 551
21 TraesCS2A01G403200 chr5D 92.000 75 6 0 6282 6356 442337556 442337630 1.170000e-18 106
22 TraesCS2A01G403200 chr5A 92.040 402 29 1 3654 4055 558543702 558544100 5.750000e-156 562
23 TraesCS2A01G403200 chr5A 92.208 77 6 0 6282 6358 558548328 558548404 9.010000e-20 110
24 TraesCS2A01G403200 chr3D 89.826 403 41 0 3657 4059 59856443 59856041 1.260000e-142 518
25 TraesCS2A01G403200 chr3A 90.127 395 36 2 8060 8451 644327476 644327870 2.110000e-140 510
26 TraesCS2A01G403200 chr7A 90.181 387 33 3 8060 8441 667401601 667401215 4.580000e-137 499
27 TraesCS2A01G403200 chr7A 95.604 91 4 0 7968 8058 667401762 667401672 6.870000e-31 147
28 TraesCS2A01G403200 chrUn 94.118 102 5 1 7957 8058 300483175 300483075 4.100000e-33 154
29 TraesCS2A01G403200 chrUn 94.118 102 5 1 7957 8058 303730373 303730473 4.100000e-33 154
30 TraesCS2A01G403200 chrUn 94.118 102 5 1 7957 8058 312609570 312609470 4.100000e-33 154


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G403200 chr2A 657808808 657817298 8490 True 15681.0 15681 100.0000 1 8491 1 chr2A.!!$R1 8490
1 TraesCS2A01G403200 chr2D 513760704 513768048 7344 True 11926.0 11926 95.9870 609 7968 1 chr2D.!!$R1 7359
2 TraesCS2A01G403200 chr2B 605377025 605384351 7326 True 11699.0 11699 95.4990 622 7968 1 chr2B.!!$R1 7346
3 TraesCS2A01G403200 chr7B 122843475 122844006 531 True 948.0 948 98.8720 7961 8491 1 chr7B.!!$R1 530
4 TraesCS2A01G403200 chr6B 250789078 250789604 526 False 935.0 935 98.6720 7965 8491 1 chr6B.!!$F1 526
5 TraesCS2A01G403200 chr6B 487829766 487830725 959 True 230.0 230 72.4200 6282 7286 1 chr6B.!!$R1 1004
6 TraesCS2A01G403200 chr3B 187518786 187519306 520 True 841.0 841 95.7930 7966 8486 1 chr3B.!!$R1 520
7 TraesCS2A01G403200 chr3B 6978377 6978936 559 True 337.5 540 91.7480 7965 8456 2 chr3B.!!$R2 491
8 TraesCS2A01G403200 chr6D 332503488 332504626 1138 False 226.0 226 71.8420 6282 7486 1 chr6D.!!$F2 1204
9 TraesCS2A01G403200 chr6A 471805393 471806531 1138 False 243.0 243 72.1060 6282 7486 1 chr6A.!!$F2 1204
10 TraesCS2A01G403200 chr7A 667401215 667401762 547 True 323.0 499 92.8925 7968 8441 2 chr7A.!!$R1 473

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
151 152 0.038435 TGGTTCAACATGGCAATGCG 60.038 50.000 0.00 0.0 37.29 4.73 F
164 165 0.099968 CAATGCGATGGTGCCTCAAG 59.900 55.000 0.00 0.0 0.00 3.02 F
1796 1803 0.108585 TCCTCACAACCAGTTCTGCC 59.891 55.000 0.00 0.0 0.00 4.85 F
2413 2425 0.389037 TCTCTCACATGCGCACACTC 60.389 55.000 14.90 0.0 0.00 3.51 F
2948 2962 0.747255 ATCAGATCAGTCGGTTCCGG 59.253 55.000 11.37 0.0 0.00 5.14 F
4591 4655 1.005630 GTCCAACTCGTCAGCAGCT 60.006 57.895 0.00 0.0 0.00 4.24 F
5590 5664 0.968405 CCCAACACCTTTGACCCATG 59.032 55.000 0.00 0.0 0.00 3.66 F
6464 6556 1.303888 CAACTCCACCCTGCAGCAT 60.304 57.895 8.66 0.0 0.00 3.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1984 1996 0.112995 TTGGATTGGCAGTGCTCCTT 59.887 50.000 19.41 2.39 0.00 3.36 R
1985 1997 0.323178 CTTGGATTGGCAGTGCTCCT 60.323 55.000 19.41 3.88 0.00 3.69 R
2891 2905 0.605589 AAGAAGAAGAAACCGGCCGG 60.606 55.000 42.17 42.17 42.03 6.13 R
4353 4409 1.379176 CGCCCCTCTCTCTCACTCA 60.379 63.158 0.00 0.00 0.00 3.41 R
4635 4701 0.179089 AGCCAAGCGATGCAGTAGAG 60.179 55.000 0.00 0.00 0.00 2.43 R
5992 6075 0.098200 CATGCATGACACGCTGGAAG 59.902 55.000 22.59 0.00 0.00 3.46 R
7433 7585 0.617535 TCATCTCGGCCTCCAAGGAA 60.618 55.000 0.00 0.00 37.67 3.36 R
8181 8409 1.840635 GCCACCTCACCTCCTTAGAAT 59.159 52.381 0.00 0.00 0.00 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.434884 CGCGGTGCACTCCATCTT 60.435 61.111 17.98 0.00 0.00 2.40
22 23 2.456119 CGCGGTGCACTCCATCTTC 61.456 63.158 17.98 0.00 0.00 2.87
23 24 2.109126 GCGGTGCACTCCATCTTCC 61.109 63.158 17.98 0.00 0.00 3.46
24 25 1.296392 CGGTGCACTCCATCTTCCA 59.704 57.895 17.98 0.00 0.00 3.53
25 26 1.021390 CGGTGCACTCCATCTTCCAC 61.021 60.000 17.98 0.00 0.00 4.02
26 27 1.021390 GGTGCACTCCATCTTCCACG 61.021 60.000 17.98 0.00 0.00 4.94
27 28 0.320771 GTGCACTCCATCTTCCACGT 60.321 55.000 10.32 0.00 0.00 4.49
28 29 0.320683 TGCACTCCATCTTCCACGTG 60.321 55.000 9.08 9.08 0.00 4.49
29 30 0.320771 GCACTCCATCTTCCACGTGT 60.321 55.000 15.65 0.00 0.00 4.49
30 31 1.714794 CACTCCATCTTCCACGTGTC 58.285 55.000 15.65 0.00 0.00 3.67
31 32 0.608640 ACTCCATCTTCCACGTGTCC 59.391 55.000 15.65 0.00 0.00 4.02
32 33 0.108138 CTCCATCTTCCACGTGTCCC 60.108 60.000 15.65 0.00 0.00 4.46
33 34 0.834261 TCCATCTTCCACGTGTCCCA 60.834 55.000 15.65 0.00 0.00 4.37
34 35 0.391661 CCATCTTCCACGTGTCCCAG 60.392 60.000 15.65 4.59 0.00 4.45
35 36 1.021390 CATCTTCCACGTGTCCCAGC 61.021 60.000 15.65 0.00 0.00 4.85
36 37 1.194781 ATCTTCCACGTGTCCCAGCT 61.195 55.000 15.65 0.00 0.00 4.24
37 38 1.071471 CTTCCACGTGTCCCAGCTT 59.929 57.895 15.65 0.00 0.00 3.74
38 39 0.951040 CTTCCACGTGTCCCAGCTTC 60.951 60.000 15.65 0.00 0.00 3.86
39 40 2.709125 TTCCACGTGTCCCAGCTTCG 62.709 60.000 15.65 0.00 0.00 3.79
40 41 2.338620 CACGTGTCCCAGCTTCGA 59.661 61.111 7.58 0.00 0.00 3.71
41 42 2.022129 CACGTGTCCCAGCTTCGAC 61.022 63.158 7.58 3.41 0.00 4.20
42 43 2.338620 CGTGTCCCAGCTTCGACA 59.661 61.111 8.28 8.28 36.67 4.35
43 44 1.300620 CGTGTCCCAGCTTCGACAA 60.301 57.895 12.99 0.00 40.53 3.18
44 45 1.284982 CGTGTCCCAGCTTCGACAAG 61.285 60.000 12.99 11.52 40.53 3.16
54 55 1.341606 CTTCGACAAGCTCTTCGTCC 58.658 55.000 14.60 0.00 36.60 4.79
55 56 0.386858 TTCGACAAGCTCTTCGTCCG 60.387 55.000 14.60 4.71 36.60 4.79
56 57 1.209383 CGACAAGCTCTTCGTCCGA 59.791 57.895 8.43 0.00 0.00 4.55
57 58 1.066114 CGACAAGCTCTTCGTCCGAC 61.066 60.000 8.43 0.00 0.00 4.79
58 59 1.066114 GACAAGCTCTTCGTCCGACG 61.066 60.000 14.94 14.94 44.19 5.12
59 60 1.801913 CAAGCTCTTCGTCCGACGG 60.802 63.158 20.35 7.84 42.81 4.79
60 61 1.970114 AAGCTCTTCGTCCGACGGA 60.970 57.895 20.35 13.88 42.81 4.69
61 62 1.521450 AAGCTCTTCGTCCGACGGAA 61.521 55.000 20.26 12.08 42.81 4.30
62 63 1.800713 GCTCTTCGTCCGACGGAAC 60.801 63.158 20.26 11.96 42.81 3.62
63 64 1.874562 CTCTTCGTCCGACGGAACT 59.125 57.895 20.26 0.00 42.81 3.01
64 65 0.454620 CTCTTCGTCCGACGGAACTG 60.455 60.000 20.26 11.83 42.81 3.16
65 66 1.443872 CTTCGTCCGACGGAACTGG 60.444 63.158 20.26 8.60 42.81 4.00
66 67 2.138656 CTTCGTCCGACGGAACTGGT 62.139 60.000 20.26 0.00 42.81 4.00
67 68 2.410638 TTCGTCCGACGGAACTGGTG 62.411 60.000 20.26 4.75 42.81 4.17
68 69 2.737376 GTCCGACGGAACTGGTGC 60.737 66.667 20.26 0.00 31.38 5.01
69 70 3.228017 TCCGACGGAACTGGTGCA 61.228 61.111 15.79 0.00 0.00 4.57
70 71 2.280524 CCGACGGAACTGGTGCAA 60.281 61.111 8.64 0.00 0.00 4.08
71 72 2.317609 CCGACGGAACTGGTGCAAG 61.318 63.158 8.64 0.00 0.00 4.01
72 73 1.300620 CGACGGAACTGGTGCAAGA 60.301 57.895 0.00 0.00 0.00 3.02
73 74 1.284982 CGACGGAACTGGTGCAAGAG 61.285 60.000 0.00 0.00 0.00 2.85
74 75 1.569479 GACGGAACTGGTGCAAGAGC 61.569 60.000 0.00 0.00 42.57 4.09
85 86 2.334307 GCAAGAGCAACTTCTGGCA 58.666 52.632 0.00 0.00 42.58 4.92
86 87 0.240411 GCAAGAGCAACTTCTGGCAG 59.760 55.000 8.58 8.58 42.58 4.85
87 88 0.240411 CAAGAGCAACTTCTGGCAGC 59.760 55.000 10.34 0.00 36.61 5.25
88 89 1.233285 AAGAGCAACTTCTGGCAGCG 61.233 55.000 10.34 5.84 32.91 5.18
89 90 2.670934 AGCAACTTCTGGCAGCGG 60.671 61.111 10.34 7.30 0.00 5.52
90 91 4.410743 GCAACTTCTGGCAGCGGC 62.411 66.667 10.34 0.00 40.13 6.53
91 92 2.979676 CAACTTCTGGCAGCGGCA 60.980 61.111 10.34 7.89 43.71 5.69
109 110 2.800736 GCGGCAAGCCCTACAATG 59.199 61.111 5.34 0.00 40.81 2.82
110 111 2.774799 GCGGCAAGCCCTACAATGG 61.775 63.158 5.34 0.00 40.81 3.16
111 112 1.077787 CGGCAAGCCCTACAATGGA 60.078 57.895 5.34 0.00 0.00 3.41
112 113 0.679640 CGGCAAGCCCTACAATGGAA 60.680 55.000 5.34 0.00 0.00 3.53
113 114 1.106285 GGCAAGCCCTACAATGGAAG 58.894 55.000 0.00 0.00 0.00 3.46
114 115 1.340991 GGCAAGCCCTACAATGGAAGA 60.341 52.381 0.00 0.00 0.00 2.87
115 116 2.446435 GCAAGCCCTACAATGGAAGAA 58.554 47.619 0.00 0.00 0.00 2.52
116 117 2.424956 GCAAGCCCTACAATGGAAGAAG 59.575 50.000 0.00 0.00 0.00 2.85
117 118 3.690460 CAAGCCCTACAATGGAAGAAGT 58.310 45.455 0.00 0.00 0.00 3.01
118 119 4.843728 CAAGCCCTACAATGGAAGAAGTA 58.156 43.478 0.00 0.00 0.00 2.24
119 120 4.489306 AGCCCTACAATGGAAGAAGTAC 57.511 45.455 0.00 0.00 0.00 2.73
120 121 4.104831 AGCCCTACAATGGAAGAAGTACT 58.895 43.478 0.00 0.00 0.00 2.73
121 122 5.278061 AGCCCTACAATGGAAGAAGTACTA 58.722 41.667 0.00 0.00 0.00 1.82
122 123 5.364157 AGCCCTACAATGGAAGAAGTACTAG 59.636 44.000 0.00 0.00 0.00 2.57
123 124 5.363005 GCCCTACAATGGAAGAAGTACTAGA 59.637 44.000 0.00 0.00 0.00 2.43
124 125 6.461788 GCCCTACAATGGAAGAAGTACTAGAG 60.462 46.154 0.00 0.00 0.00 2.43
125 126 6.834451 CCCTACAATGGAAGAAGTACTAGAGA 59.166 42.308 0.00 0.00 0.00 3.10
126 127 7.342284 CCCTACAATGGAAGAAGTACTAGAGAA 59.658 40.741 0.00 0.00 0.00 2.87
127 128 8.750298 CCTACAATGGAAGAAGTACTAGAGAAA 58.250 37.037 0.00 0.00 0.00 2.52
128 129 9.575783 CTACAATGGAAGAAGTACTAGAGAAAC 57.424 37.037 0.00 0.00 0.00 2.78
129 130 7.091443 ACAATGGAAGAAGTACTAGAGAAACG 58.909 38.462 0.00 0.00 0.00 3.60
130 131 7.039923 ACAATGGAAGAAGTACTAGAGAAACGA 60.040 37.037 0.00 0.00 0.00 3.85
131 132 6.497785 TGGAAGAAGTACTAGAGAAACGAG 57.502 41.667 0.00 0.00 0.00 4.18
132 133 6.002704 TGGAAGAAGTACTAGAGAAACGAGT 58.997 40.000 0.00 0.00 38.05 4.18
133 134 6.072618 TGGAAGAAGTACTAGAGAAACGAGTG 60.073 42.308 0.00 0.00 36.06 3.51
134 135 5.883503 AGAAGTACTAGAGAAACGAGTGG 57.116 43.478 0.00 0.00 36.06 4.00
135 136 5.315348 AGAAGTACTAGAGAAACGAGTGGT 58.685 41.667 0.00 0.00 36.06 4.16
136 137 5.769162 AGAAGTACTAGAGAAACGAGTGGTT 59.231 40.000 0.00 0.00 41.76 3.67
137 138 5.625921 AGTACTAGAGAAACGAGTGGTTC 57.374 43.478 0.00 0.00 38.08 3.62
138 139 5.068636 AGTACTAGAGAAACGAGTGGTTCA 58.931 41.667 0.00 0.00 38.08 3.18
139 140 4.931661 ACTAGAGAAACGAGTGGTTCAA 57.068 40.909 0.00 0.00 38.08 2.69
140 141 4.618965 ACTAGAGAAACGAGTGGTTCAAC 58.381 43.478 0.00 0.00 38.08 3.18
141 142 3.536956 AGAGAAACGAGTGGTTCAACA 57.463 42.857 0.00 0.00 38.08 3.33
142 143 4.073293 AGAGAAACGAGTGGTTCAACAT 57.927 40.909 0.00 0.00 38.08 2.71
143 144 3.809832 AGAGAAACGAGTGGTTCAACATG 59.190 43.478 0.00 0.00 38.08 3.21
144 145 2.878406 AGAAACGAGTGGTTCAACATGG 59.122 45.455 0.00 0.00 38.08 3.66
145 146 0.951558 AACGAGTGGTTCAACATGGC 59.048 50.000 0.00 0.00 31.79 4.40
146 147 0.179032 ACGAGTGGTTCAACATGGCA 60.179 50.000 0.00 0.00 0.00 4.92
147 148 0.950836 CGAGTGGTTCAACATGGCAA 59.049 50.000 0.00 0.00 0.00 4.52
148 149 1.541147 CGAGTGGTTCAACATGGCAAT 59.459 47.619 0.00 0.00 0.00 3.56
149 150 2.669113 CGAGTGGTTCAACATGGCAATG 60.669 50.000 0.00 0.00 39.89 2.82
150 151 1.001181 AGTGGTTCAACATGGCAATGC 59.999 47.619 0.00 0.00 37.29 3.56
151 152 0.038435 TGGTTCAACATGGCAATGCG 60.038 50.000 0.00 0.00 37.29 4.73
152 153 0.243365 GGTTCAACATGGCAATGCGA 59.757 50.000 0.00 0.00 37.29 5.10
153 154 1.135024 GGTTCAACATGGCAATGCGAT 60.135 47.619 0.00 0.00 37.29 4.58
155 156 0.456628 TCAACATGGCAATGCGATGG 59.543 50.000 28.63 15.34 46.34 3.51
156 157 0.173935 CAACATGGCAATGCGATGGT 59.826 50.000 28.63 22.69 44.98 3.55
157 158 0.173935 AACATGGCAATGCGATGGTG 59.826 50.000 28.63 10.85 42.67 4.17
158 159 1.590525 CATGGCAATGCGATGGTGC 60.591 57.895 20.25 0.00 40.24 5.01
161 162 2.410469 GCAATGCGATGGTGCCTC 59.590 61.111 0.00 0.00 31.94 4.70
162 163 2.409055 GCAATGCGATGGTGCCTCA 61.409 57.895 0.00 0.00 31.94 3.86
163 164 1.936436 GCAATGCGATGGTGCCTCAA 61.936 55.000 0.00 0.00 31.94 3.02
164 165 0.099968 CAATGCGATGGTGCCTCAAG 59.900 55.000 0.00 0.00 0.00 3.02
165 166 1.033746 AATGCGATGGTGCCTCAAGG 61.034 55.000 0.00 0.00 38.53 3.61
166 167 2.045926 GCGATGGTGCCTCAAGGT 60.046 61.111 0.00 0.00 37.57 3.50
167 168 2.109126 GCGATGGTGCCTCAAGGTC 61.109 63.158 0.00 0.00 37.57 3.85
168 169 1.599047 CGATGGTGCCTCAAGGTCT 59.401 57.895 0.00 0.00 37.57 3.85
169 170 0.742281 CGATGGTGCCTCAAGGTCTG 60.742 60.000 0.00 0.00 37.57 3.51
170 171 0.393537 GATGGTGCCTCAAGGTCTGG 60.394 60.000 0.00 0.00 37.57 3.86
171 172 1.136329 ATGGTGCCTCAAGGTCTGGT 61.136 55.000 0.00 0.00 37.57 4.00
172 173 1.003233 GGTGCCTCAAGGTCTGGTC 60.003 63.158 0.00 0.00 37.57 4.02
173 174 1.003233 GTGCCTCAAGGTCTGGTCC 60.003 63.158 0.00 0.00 37.57 4.46
174 175 2.266055 GCCTCAAGGTCTGGTCCG 59.734 66.667 0.00 0.00 37.57 4.79
175 176 2.584391 GCCTCAAGGTCTGGTCCGT 61.584 63.158 0.00 0.00 37.57 4.69
176 177 2.058675 CCTCAAGGTCTGGTCCGTT 58.941 57.895 0.00 0.00 0.00 4.44
177 178 0.320771 CCTCAAGGTCTGGTCCGTTG 60.321 60.000 0.00 0.00 0.00 4.10
178 179 0.320771 CTCAAGGTCTGGTCCGTTGG 60.321 60.000 0.00 0.00 0.00 3.77
179 180 0.761323 TCAAGGTCTGGTCCGTTGGA 60.761 55.000 0.00 0.00 0.00 3.53
193 194 4.308458 TGGACTCACCAACCGCCG 62.308 66.667 0.00 0.00 46.75 6.46
195 196 3.998672 GACTCACCAACCGCCGGA 61.999 66.667 11.71 0.00 0.00 5.14
196 197 3.934391 GACTCACCAACCGCCGGAG 62.934 68.421 11.71 0.00 0.00 4.63
197 198 4.003788 CTCACCAACCGCCGGAGT 62.004 66.667 11.71 0.36 0.00 3.85
198 199 3.530910 CTCACCAACCGCCGGAGTT 62.531 63.158 11.71 4.75 0.00 3.01
199 200 3.047877 CACCAACCGCCGGAGTTC 61.048 66.667 11.71 0.00 0.00 3.01
200 201 4.675029 ACCAACCGCCGGAGTTCG 62.675 66.667 11.71 2.88 38.88 3.95
208 209 4.760047 CCGGAGTTCGCCACCTGG 62.760 72.222 0.00 0.00 37.59 4.45
209 210 4.760047 CGGAGTTCGCCACCTGGG 62.760 72.222 0.00 0.00 40.85 4.45
210 211 3.319198 GGAGTTCGCCACCTGGGA 61.319 66.667 0.00 0.00 40.01 4.37
211 212 2.266055 GAGTTCGCCACCTGGGAG 59.734 66.667 0.00 0.00 40.01 4.30
212 213 3.316573 GAGTTCGCCACCTGGGAGG 62.317 68.421 0.00 0.22 42.49 4.30
213 214 3.319198 GTTCGCCACCTGGGAGGA 61.319 66.667 11.16 0.00 37.67 3.71
214 215 2.285368 TTCGCCACCTGGGAGGAT 60.285 61.111 11.16 0.00 37.67 3.24
215 216 2.367202 TTCGCCACCTGGGAGGATC 61.367 63.158 11.16 0.00 37.67 3.36
216 217 4.227134 CGCCACCTGGGAGGATCG 62.227 72.222 11.16 3.02 37.67 3.69
226 227 4.992294 GAGGATCGCGCCGAGCTC 62.992 72.222 14.95 2.73 42.17 4.09
234 235 4.519437 CGCCGAGCTCCAGCATCA 62.519 66.667 20.05 0.00 45.16 3.07
235 236 2.894387 GCCGAGCTCCAGCATCAC 60.894 66.667 16.46 0.00 45.16 3.06
236 237 2.898738 CCGAGCTCCAGCATCACT 59.101 61.111 8.47 0.00 45.16 3.41
237 238 1.220206 CCGAGCTCCAGCATCACTT 59.780 57.895 8.47 0.00 45.16 3.16
238 239 0.809241 CCGAGCTCCAGCATCACTTC 60.809 60.000 8.47 0.00 45.16 3.01
239 240 0.809241 CGAGCTCCAGCATCACTTCC 60.809 60.000 8.47 0.00 45.16 3.46
240 241 0.463474 GAGCTCCAGCATCACTTCCC 60.463 60.000 0.87 0.00 45.16 3.97
241 242 1.817099 GCTCCAGCATCACTTCCCG 60.817 63.158 0.00 0.00 41.59 5.14
242 243 1.900351 CTCCAGCATCACTTCCCGA 59.100 57.895 0.00 0.00 0.00 5.14
243 244 0.250234 CTCCAGCATCACTTCCCGAA 59.750 55.000 0.00 0.00 0.00 4.30
244 245 0.690192 TCCAGCATCACTTCCCGAAA 59.310 50.000 0.00 0.00 0.00 3.46
245 246 1.089920 CCAGCATCACTTCCCGAAAG 58.910 55.000 0.00 0.00 41.08 2.62
246 247 0.449388 CAGCATCACTTCCCGAAAGC 59.551 55.000 0.00 0.00 38.67 3.51
247 248 0.326264 AGCATCACTTCCCGAAAGCT 59.674 50.000 0.00 0.00 38.67 3.74
248 249 0.729690 GCATCACTTCCCGAAAGCTC 59.270 55.000 0.00 0.00 38.67 4.09
249 250 1.373570 CATCACTTCCCGAAAGCTCC 58.626 55.000 0.00 0.00 38.67 4.70
250 251 0.984230 ATCACTTCCCGAAAGCTCCA 59.016 50.000 0.00 0.00 38.67 3.86
251 252 0.321671 TCACTTCCCGAAAGCTCCAG 59.678 55.000 0.00 0.00 38.67 3.86
252 253 1.003233 ACTTCCCGAAAGCTCCAGC 60.003 57.895 0.00 0.00 38.67 4.85
263 264 2.118076 CTCCAGCTTGGGGCCAAA 59.882 61.111 4.39 0.00 43.05 3.28
264 265 2.203625 TCCAGCTTGGGGCCAAAC 60.204 61.111 4.39 0.00 43.05 2.93
265 266 2.203684 CCAGCTTGGGGCCAAACT 60.204 61.111 4.39 0.00 43.05 2.66
266 267 1.076549 CCAGCTTGGGGCCAAACTA 59.923 57.895 4.39 0.00 43.05 2.24
267 268 0.324645 CCAGCTTGGGGCCAAACTAT 60.325 55.000 4.39 0.00 43.05 2.12
268 269 0.819582 CAGCTTGGGGCCAAACTATG 59.180 55.000 4.39 0.00 43.05 2.23
269 270 0.409484 AGCTTGGGGCCAAACTATGT 59.591 50.000 4.39 0.00 43.05 2.29
270 271 0.817654 GCTTGGGGCCAAACTATGTC 59.182 55.000 4.39 0.00 35.33 3.06
271 272 1.616994 GCTTGGGGCCAAACTATGTCT 60.617 52.381 4.39 0.00 35.33 3.41
272 273 2.369394 CTTGGGGCCAAACTATGTCTC 58.631 52.381 4.39 0.00 35.33 3.36
273 274 0.251916 TGGGGCCAAACTATGTCTCG 59.748 55.000 4.39 0.00 0.00 4.04
274 275 0.539986 GGGGCCAAACTATGTCTCGA 59.460 55.000 4.39 0.00 0.00 4.04
275 276 1.473434 GGGGCCAAACTATGTCTCGAG 60.473 57.143 5.93 5.93 0.00 4.04
276 277 1.473434 GGGCCAAACTATGTCTCGAGG 60.473 57.143 13.56 0.00 0.00 4.63
277 278 1.473434 GGCCAAACTATGTCTCGAGGG 60.473 57.143 13.56 3.31 0.00 4.30
278 279 1.473434 GCCAAACTATGTCTCGAGGGG 60.473 57.143 13.56 1.37 0.00 4.79
279 280 1.139058 CCAAACTATGTCTCGAGGGGG 59.861 57.143 13.56 1.72 0.00 5.40
280 281 2.108168 CAAACTATGTCTCGAGGGGGA 58.892 52.381 13.56 0.00 0.00 4.81
281 282 2.074729 AACTATGTCTCGAGGGGGAG 57.925 55.000 13.56 8.06 35.32 4.30
282 283 0.186386 ACTATGTCTCGAGGGGGAGG 59.814 60.000 13.56 1.92 34.74 4.30
283 284 0.540830 CTATGTCTCGAGGGGGAGGG 60.541 65.000 13.56 0.00 34.74 4.30
284 285 1.294426 TATGTCTCGAGGGGGAGGGT 61.294 60.000 13.56 0.00 34.74 4.34
285 286 1.294426 ATGTCTCGAGGGGGAGGGTA 61.294 60.000 13.56 0.00 34.74 3.69
286 287 1.294426 TGTCTCGAGGGGGAGGGTAT 61.294 60.000 13.56 0.00 34.74 2.73
287 288 0.828343 GTCTCGAGGGGGAGGGTATG 60.828 65.000 13.56 0.00 34.74 2.39
288 289 1.233369 CTCGAGGGGGAGGGTATGT 59.767 63.158 3.91 0.00 0.00 2.29
289 290 0.398664 CTCGAGGGGGAGGGTATGTT 60.399 60.000 3.91 0.00 0.00 2.71
290 291 0.935942 TCGAGGGGGAGGGTATGTTA 59.064 55.000 0.00 0.00 0.00 2.41
291 292 1.046204 CGAGGGGGAGGGTATGTTAC 58.954 60.000 0.00 0.00 0.00 2.50
292 293 1.046204 GAGGGGGAGGGTATGTTACG 58.954 60.000 0.00 0.00 0.00 3.18
293 294 1.052694 AGGGGGAGGGTATGTTACGC 61.053 60.000 0.00 0.00 41.44 4.42
294 295 1.448924 GGGGAGGGTATGTTACGCC 59.551 63.158 0.00 0.00 42.01 5.68
295 296 1.448924 GGGAGGGTATGTTACGCCC 59.551 63.158 2.06 2.06 42.01 6.13
300 301 2.118313 GGGTATGTTACGCCCTTTGT 57.882 50.000 2.93 0.00 39.31 2.83
301 302 2.011947 GGGTATGTTACGCCCTTTGTC 58.988 52.381 2.93 0.00 39.31 3.18
302 303 2.011947 GGTATGTTACGCCCTTTGTCC 58.988 52.381 0.00 0.00 0.00 4.02
303 304 2.616001 GGTATGTTACGCCCTTTGTCCA 60.616 50.000 0.00 0.00 0.00 4.02
304 305 2.507407 ATGTTACGCCCTTTGTCCAT 57.493 45.000 0.00 0.00 0.00 3.41
305 306 1.816074 TGTTACGCCCTTTGTCCATC 58.184 50.000 0.00 0.00 0.00 3.51
306 307 1.092348 GTTACGCCCTTTGTCCATCC 58.908 55.000 0.00 0.00 0.00 3.51
307 308 0.391927 TTACGCCCTTTGTCCATCCG 60.392 55.000 0.00 0.00 0.00 4.18
308 309 1.546589 TACGCCCTTTGTCCATCCGT 61.547 55.000 0.00 0.00 0.00 4.69
309 310 2.106683 CGCCCTTTGTCCATCCGTC 61.107 63.158 0.00 0.00 0.00 4.79
310 311 1.749258 GCCCTTTGTCCATCCGTCC 60.749 63.158 0.00 0.00 0.00 4.79
311 312 1.077716 CCCTTTGTCCATCCGTCCC 60.078 63.158 0.00 0.00 0.00 4.46
312 313 1.682849 CCTTTGTCCATCCGTCCCA 59.317 57.895 0.00 0.00 0.00 4.37
313 314 0.676782 CCTTTGTCCATCCGTCCCAC 60.677 60.000 0.00 0.00 0.00 4.61
314 315 0.676782 CTTTGTCCATCCGTCCCACC 60.677 60.000 0.00 0.00 0.00 4.61
315 316 1.131303 TTTGTCCATCCGTCCCACCT 61.131 55.000 0.00 0.00 0.00 4.00
316 317 1.836999 TTGTCCATCCGTCCCACCTG 61.837 60.000 0.00 0.00 0.00 4.00
317 318 3.399181 TCCATCCGTCCCACCTGC 61.399 66.667 0.00 0.00 0.00 4.85
318 319 3.716195 CCATCCGTCCCACCTGCA 61.716 66.667 0.00 0.00 0.00 4.41
319 320 2.124983 CATCCGTCCCACCTGCAG 60.125 66.667 6.78 6.78 0.00 4.41
320 321 2.284625 ATCCGTCCCACCTGCAGA 60.285 61.111 17.39 0.00 0.00 4.26
321 322 2.362369 ATCCGTCCCACCTGCAGAG 61.362 63.158 17.39 8.04 0.00 3.35
322 323 4.767255 CCGTCCCACCTGCAGAGC 62.767 72.222 17.39 0.00 0.00 4.09
323 324 4.767255 CGTCCCACCTGCAGAGCC 62.767 72.222 17.39 0.00 0.00 4.70
324 325 3.640407 GTCCCACCTGCAGAGCCA 61.640 66.667 17.39 0.00 0.00 4.75
325 326 2.611800 TCCCACCTGCAGAGCCAT 60.612 61.111 17.39 0.00 0.00 4.40
326 327 2.124403 CCCACCTGCAGAGCCATC 60.124 66.667 17.39 0.00 0.00 3.51
327 328 2.124403 CCACCTGCAGAGCCATCC 60.124 66.667 17.39 0.00 0.00 3.51
328 329 2.672908 CACCTGCAGAGCCATCCA 59.327 61.111 17.39 0.00 0.00 3.41
329 330 1.001764 CACCTGCAGAGCCATCCAA 60.002 57.895 17.39 0.00 0.00 3.53
330 331 1.030488 CACCTGCAGAGCCATCCAAG 61.030 60.000 17.39 0.00 0.00 3.61
331 332 1.453379 CCTGCAGAGCCATCCAAGG 60.453 63.158 17.39 0.00 0.00 3.61
332 333 1.453379 CTGCAGAGCCATCCAAGGG 60.453 63.158 8.42 0.00 0.00 3.95
333 334 1.918467 CTGCAGAGCCATCCAAGGGA 61.918 60.000 8.42 0.00 35.55 4.20
334 335 1.452833 GCAGAGCCATCCAAGGGAC 60.453 63.158 0.00 0.00 32.98 4.46
335 336 1.153289 CAGAGCCATCCAAGGGACG 60.153 63.158 0.00 0.00 32.98 4.79
336 337 2.190578 GAGCCATCCAAGGGACGG 59.809 66.667 0.00 0.00 38.22 4.79
339 340 3.727258 CCATCCAAGGGACGGCCA 61.727 66.667 11.00 0.00 32.98 5.36
340 341 2.354729 CATCCAAGGGACGGCCAA 59.645 61.111 11.00 0.00 32.98 4.52
341 342 2.046285 CATCCAAGGGACGGCCAAC 61.046 63.158 11.00 0.00 32.98 3.77
342 343 2.534396 ATCCAAGGGACGGCCAACA 61.534 57.895 11.00 0.00 32.98 3.33
343 344 2.075355 ATCCAAGGGACGGCCAACAA 62.075 55.000 11.00 0.00 32.98 2.83
344 345 2.561037 CCAAGGGACGGCCAACAAC 61.561 63.158 11.00 0.00 35.15 3.32
345 346 1.528309 CAAGGGACGGCCAACAACT 60.528 57.895 11.00 0.00 35.15 3.16
346 347 0.250553 CAAGGGACGGCCAACAACTA 60.251 55.000 11.00 0.00 35.15 2.24
347 348 0.250597 AAGGGACGGCCAACAACTAC 60.251 55.000 11.00 0.00 35.15 2.73
348 349 1.673337 GGGACGGCCAACAACTACC 60.673 63.158 11.00 0.00 35.15 3.18
349 350 1.673337 GGACGGCCAACAACTACCC 60.673 63.158 0.00 0.00 0.00 3.69
350 351 1.673337 GACGGCCAACAACTACCCC 60.673 63.158 2.24 0.00 0.00 4.95
351 352 2.120737 GACGGCCAACAACTACCCCT 62.121 60.000 2.24 0.00 0.00 4.79
352 353 0.837260 ACGGCCAACAACTACCCCTA 60.837 55.000 2.24 0.00 0.00 3.53
353 354 0.392060 CGGCCAACAACTACCCCTAC 60.392 60.000 2.24 0.00 0.00 3.18
354 355 0.989602 GGCCAACAACTACCCCTACT 59.010 55.000 0.00 0.00 0.00 2.57
355 356 1.339727 GGCCAACAACTACCCCTACTG 60.340 57.143 0.00 0.00 0.00 2.74
356 357 1.339727 GCCAACAACTACCCCTACTGG 60.340 57.143 0.00 0.00 0.00 4.00
368 369 1.471119 CCTACTGGGCTAGAACGACA 58.529 55.000 4.33 0.00 0.00 4.35
369 370 1.405821 CCTACTGGGCTAGAACGACAG 59.594 57.143 4.33 0.00 35.40 3.51
370 371 0.815734 TACTGGGCTAGAACGACAGC 59.184 55.000 4.33 0.00 37.05 4.40
374 375 2.202756 GCTAGAACGACAGCCCCG 60.203 66.667 0.00 0.00 0.00 5.73
375 376 3.003113 GCTAGAACGACAGCCCCGT 62.003 63.158 0.00 0.00 42.61 5.28
376 377 1.139095 CTAGAACGACAGCCCCGTC 59.861 63.158 0.00 0.00 39.57 4.79
377 378 2.280823 CTAGAACGACAGCCCCGTCC 62.281 65.000 0.00 0.00 39.57 4.79
378 379 3.998672 GAACGACAGCCCCGTCCA 61.999 66.667 0.00 0.00 39.57 4.02
379 380 4.309950 AACGACAGCCCCGTCCAC 62.310 66.667 0.00 0.00 39.57 4.02
391 392 2.766651 GTCCACCCCAGCCCGATA 60.767 66.667 0.00 0.00 0.00 2.92
392 393 2.445845 TCCACCCCAGCCCGATAG 60.446 66.667 0.00 0.00 0.00 2.08
393 394 2.768344 CCACCCCAGCCCGATAGT 60.768 66.667 0.00 0.00 0.00 2.12
394 395 2.505982 CACCCCAGCCCGATAGTG 59.494 66.667 0.00 0.00 0.00 2.74
395 396 2.040606 ACCCCAGCCCGATAGTGT 59.959 61.111 0.00 0.00 0.00 3.55
396 397 2.064581 ACCCCAGCCCGATAGTGTC 61.065 63.158 0.00 0.00 0.00 3.67
397 398 1.762460 CCCCAGCCCGATAGTGTCT 60.762 63.158 0.00 0.00 0.00 3.41
398 399 1.443407 CCCAGCCCGATAGTGTCTG 59.557 63.158 0.00 0.00 0.00 3.51
399 400 1.443407 CCAGCCCGATAGTGTCTGG 59.557 63.158 0.00 0.00 38.14 3.86
400 401 1.443407 CAGCCCGATAGTGTCTGGG 59.557 63.158 10.90 10.90 41.05 4.45
401 402 1.043116 CAGCCCGATAGTGTCTGGGA 61.043 60.000 16.95 0.00 40.78 4.37
402 403 1.043673 AGCCCGATAGTGTCTGGGAC 61.044 60.000 16.95 10.20 40.78 4.46
403 404 1.327690 GCCCGATAGTGTCTGGGACA 61.328 60.000 16.95 0.00 40.78 4.02
415 416 4.065281 GGGACACGACCCGACTGG 62.065 72.222 0.00 0.00 40.49 4.00
427 428 2.696506 CCCGACTGGTTAAGAGGAAAC 58.303 52.381 0.00 0.00 31.70 2.78
428 429 2.038033 CCCGACTGGTTAAGAGGAAACA 59.962 50.000 0.00 0.00 31.70 2.83
430 431 3.006537 CCGACTGGTTAAGAGGAAACAGA 59.993 47.826 8.14 0.00 45.40 3.41
431 432 3.988517 CGACTGGTTAAGAGGAAACAGAC 59.011 47.826 8.14 1.37 45.40 3.51
432 433 4.316645 GACTGGTTAAGAGGAAACAGACC 58.683 47.826 8.14 0.00 45.40 3.85
433 434 3.072622 ACTGGTTAAGAGGAAACAGACCC 59.927 47.826 8.14 0.00 45.40 4.46
434 435 2.374170 TGGTTAAGAGGAAACAGACCCC 59.626 50.000 0.00 0.00 0.00 4.95
435 436 2.643304 GGTTAAGAGGAAACAGACCCCT 59.357 50.000 0.00 0.00 0.00 4.79
436 437 3.307550 GGTTAAGAGGAAACAGACCCCTC 60.308 52.174 0.00 0.00 45.16 4.30
437 438 1.363246 AAGAGGAAACAGACCCCTCC 58.637 55.000 0.00 0.00 45.77 4.30
438 439 0.494095 AGAGGAAACAGACCCCTCCT 59.506 55.000 0.00 0.00 45.77 3.69
439 440 0.615850 GAGGAAACAGACCCCTCCTG 59.384 60.000 0.00 0.00 40.35 3.86
440 441 0.842467 AGGAAACAGACCCCTCCTGG 60.842 60.000 0.00 0.00 36.92 4.45
450 451 3.393360 CCTCCTGGGTGAGGTGAC 58.607 66.667 0.00 0.00 45.76 3.67
451 452 2.650116 CCTCCTGGGTGAGGTGACG 61.650 68.421 0.00 0.00 45.76 4.35
452 453 1.606601 CTCCTGGGTGAGGTGACGA 60.607 63.158 0.00 0.00 43.37 4.20
453 454 1.599606 CTCCTGGGTGAGGTGACGAG 61.600 65.000 0.00 0.00 43.37 4.18
454 455 1.606601 CCTGGGTGAGGTGACGAGA 60.607 63.158 0.00 0.00 37.02 4.04
455 456 1.185618 CCTGGGTGAGGTGACGAGAA 61.186 60.000 0.00 0.00 37.02 2.87
456 457 0.898320 CTGGGTGAGGTGACGAGAAT 59.102 55.000 0.00 0.00 0.00 2.40
457 458 0.608130 TGGGTGAGGTGACGAGAATG 59.392 55.000 0.00 0.00 0.00 2.67
458 459 0.608640 GGGTGAGGTGACGAGAATGT 59.391 55.000 0.00 0.00 0.00 2.71
459 460 1.822990 GGGTGAGGTGACGAGAATGTA 59.177 52.381 0.00 0.00 0.00 2.29
460 461 2.416972 GGGTGAGGTGACGAGAATGTAC 60.417 54.545 0.00 0.00 0.00 2.90
461 462 2.492484 GGTGAGGTGACGAGAATGTACT 59.508 50.000 0.00 0.00 0.00 2.73
462 463 3.693085 GGTGAGGTGACGAGAATGTACTA 59.307 47.826 0.00 0.00 0.00 1.82
463 464 4.201930 GGTGAGGTGACGAGAATGTACTAG 60.202 50.000 0.00 0.00 0.00 2.57
464 465 3.945921 TGAGGTGACGAGAATGTACTAGG 59.054 47.826 0.00 0.00 0.00 3.02
465 466 3.946558 GAGGTGACGAGAATGTACTAGGT 59.053 47.826 0.00 0.00 0.00 3.08
466 467 4.342359 AGGTGACGAGAATGTACTAGGTT 58.658 43.478 0.00 0.00 0.00 3.50
467 468 5.503927 AGGTGACGAGAATGTACTAGGTTA 58.496 41.667 0.00 0.00 0.00 2.85
468 469 6.127793 AGGTGACGAGAATGTACTAGGTTAT 58.872 40.000 0.00 0.00 0.00 1.89
469 470 7.285566 AGGTGACGAGAATGTACTAGGTTATA 58.714 38.462 0.00 0.00 0.00 0.98
470 471 7.444792 AGGTGACGAGAATGTACTAGGTTATAG 59.555 40.741 0.00 0.00 0.00 1.31
471 472 7.308469 GGTGACGAGAATGTACTAGGTTATAGG 60.308 44.444 0.00 0.00 0.00 2.57
472 473 6.206243 TGACGAGAATGTACTAGGTTATAGGC 59.794 42.308 0.00 0.00 0.00 3.93
473 474 5.180868 ACGAGAATGTACTAGGTTATAGGCG 59.819 44.000 0.00 0.00 0.00 5.52
474 475 5.391736 CGAGAATGTACTAGGTTATAGGCGG 60.392 48.000 0.00 0.00 0.00 6.13
475 476 4.220163 AGAATGTACTAGGTTATAGGCGGC 59.780 45.833 0.00 0.00 0.00 6.53
476 477 1.881973 TGTACTAGGTTATAGGCGGCG 59.118 52.381 0.51 0.51 0.00 6.46
477 478 1.200948 GTACTAGGTTATAGGCGGCGG 59.799 57.143 9.78 0.00 0.00 6.13
478 479 1.080025 CTAGGTTATAGGCGGCGGC 60.080 63.158 27.24 27.24 38.90 6.53
479 480 1.532316 TAGGTTATAGGCGGCGGCT 60.532 57.895 37.55 37.55 42.39 5.52
480 481 1.530013 TAGGTTATAGGCGGCGGCTC 61.530 60.000 39.51 24.18 39.70 4.70
481 482 2.735237 GTTATAGGCGGCGGCTCT 59.265 61.111 39.51 30.94 39.70 4.09
482 483 1.373121 GTTATAGGCGGCGGCTCTC 60.373 63.158 39.51 22.35 39.70 3.20
483 484 1.530891 TTATAGGCGGCGGCTCTCT 60.531 57.895 39.51 25.59 39.70 3.10
484 485 1.524863 TTATAGGCGGCGGCTCTCTC 61.525 60.000 39.51 4.25 39.70 3.20
488 489 4.273257 GCGGCGGCTCTCTCCTAC 62.273 72.222 9.78 0.00 35.83 3.18
489 490 3.597728 CGGCGGCTCTCTCCTACC 61.598 72.222 7.61 0.00 0.00 3.18
494 495 3.737702 GGCTCTCTCCTACCGATCT 57.262 57.895 0.00 0.00 0.00 2.75
495 496 1.530323 GGCTCTCTCCTACCGATCTC 58.470 60.000 0.00 0.00 0.00 2.75
496 497 1.530323 GCTCTCTCCTACCGATCTCC 58.470 60.000 0.00 0.00 0.00 3.71
497 498 1.073284 GCTCTCTCCTACCGATCTCCT 59.927 57.143 0.00 0.00 0.00 3.69
498 499 2.488347 GCTCTCTCCTACCGATCTCCTT 60.488 54.545 0.00 0.00 0.00 3.36
499 500 3.827722 CTCTCTCCTACCGATCTCCTTT 58.172 50.000 0.00 0.00 0.00 3.11
500 501 3.818773 CTCTCTCCTACCGATCTCCTTTC 59.181 52.174 0.00 0.00 0.00 2.62
501 502 2.888414 CTCTCCTACCGATCTCCTTTCC 59.112 54.545 0.00 0.00 0.00 3.13
502 503 2.514582 TCTCCTACCGATCTCCTTTCCT 59.485 50.000 0.00 0.00 0.00 3.36
503 504 2.888414 CTCCTACCGATCTCCTTTCCTC 59.112 54.545 0.00 0.00 0.00 3.71
504 505 2.514582 TCCTACCGATCTCCTTTCCTCT 59.485 50.000 0.00 0.00 0.00 3.69
505 506 3.052793 TCCTACCGATCTCCTTTCCTCTT 60.053 47.826 0.00 0.00 0.00 2.85
506 507 3.319689 CCTACCGATCTCCTTTCCTCTTC 59.680 52.174 0.00 0.00 0.00 2.87
507 508 2.112190 ACCGATCTCCTTTCCTCTTCC 58.888 52.381 0.00 0.00 0.00 3.46
508 509 2.292587 ACCGATCTCCTTTCCTCTTCCT 60.293 50.000 0.00 0.00 0.00 3.36
509 510 2.364002 CCGATCTCCTTTCCTCTTCCTC 59.636 54.545 0.00 0.00 0.00 3.71
510 511 3.295973 CGATCTCCTTTCCTCTTCCTCT 58.704 50.000 0.00 0.00 0.00 3.69
511 512 3.068024 CGATCTCCTTTCCTCTTCCTCTG 59.932 52.174 0.00 0.00 0.00 3.35
512 513 2.826488 TCTCCTTTCCTCTTCCTCTGG 58.174 52.381 0.00 0.00 0.00 3.86
513 514 2.383683 TCTCCTTTCCTCTTCCTCTGGA 59.616 50.000 0.00 0.00 0.00 3.86
514 515 3.177228 CTCCTTTCCTCTTCCTCTGGAA 58.823 50.000 0.00 0.00 39.66 3.53
515 516 2.907042 TCCTTTCCTCTTCCTCTGGAAC 59.093 50.000 0.00 0.00 39.29 3.62
516 517 2.026729 CCTTTCCTCTTCCTCTGGAACC 60.027 54.545 0.00 0.00 39.29 3.62
517 518 1.657804 TTCCTCTTCCTCTGGAACCC 58.342 55.000 0.00 0.00 36.71 4.11
518 519 0.614979 TCCTCTTCCTCTGGAACCCG 60.615 60.000 0.00 0.00 36.71 5.28
519 520 0.614979 CCTCTTCCTCTGGAACCCGA 60.615 60.000 0.00 0.00 36.71 5.14
520 521 0.820871 CTCTTCCTCTGGAACCCGAG 59.179 60.000 5.50 5.50 36.71 4.63
521 522 0.408309 TCTTCCTCTGGAACCCGAGA 59.592 55.000 12.61 0.00 36.71 4.04
522 523 1.203137 TCTTCCTCTGGAACCCGAGAA 60.203 52.381 12.61 5.77 36.71 2.87
523 524 1.834263 CTTCCTCTGGAACCCGAGAAT 59.166 52.381 12.61 0.00 36.71 2.40
524 525 1.952621 TCCTCTGGAACCCGAGAATT 58.047 50.000 12.61 0.00 0.00 2.17
525 526 2.266279 TCCTCTGGAACCCGAGAATTT 58.734 47.619 12.61 0.00 0.00 1.82
526 527 2.027192 TCCTCTGGAACCCGAGAATTTG 60.027 50.000 12.61 0.00 0.00 2.32
527 528 2.027192 CCTCTGGAACCCGAGAATTTGA 60.027 50.000 12.61 0.00 0.00 2.69
528 529 3.003480 CTCTGGAACCCGAGAATTTGAC 58.997 50.000 6.45 0.00 0.00 3.18
529 530 2.637872 TCTGGAACCCGAGAATTTGACT 59.362 45.455 0.00 0.00 0.00 3.41
530 531 2.744202 CTGGAACCCGAGAATTTGACTG 59.256 50.000 0.00 0.00 0.00 3.51
531 532 2.370519 TGGAACCCGAGAATTTGACTGA 59.629 45.455 0.00 0.00 0.00 3.41
532 533 3.003480 GGAACCCGAGAATTTGACTGAG 58.997 50.000 0.00 0.00 0.00 3.35
533 534 3.306780 GGAACCCGAGAATTTGACTGAGA 60.307 47.826 0.00 0.00 0.00 3.27
534 535 4.508662 GAACCCGAGAATTTGACTGAGAT 58.491 43.478 0.00 0.00 0.00 2.75
535 536 4.559862 ACCCGAGAATTTGACTGAGATT 57.440 40.909 0.00 0.00 0.00 2.40
536 537 4.256920 ACCCGAGAATTTGACTGAGATTG 58.743 43.478 0.00 0.00 0.00 2.67
537 538 4.256920 CCCGAGAATTTGACTGAGATTGT 58.743 43.478 0.00 0.00 0.00 2.71
538 539 5.046591 ACCCGAGAATTTGACTGAGATTGTA 60.047 40.000 0.00 0.00 0.00 2.41
539 540 6.051717 CCCGAGAATTTGACTGAGATTGTAT 58.948 40.000 0.00 0.00 0.00 2.29
540 541 6.201806 CCCGAGAATTTGACTGAGATTGTATC 59.798 42.308 0.00 0.00 0.00 2.24
541 542 6.758416 CCGAGAATTTGACTGAGATTGTATCA 59.242 38.462 0.00 0.00 0.00 2.15
542 543 7.254252 CCGAGAATTTGACTGAGATTGTATCAC 60.254 40.741 0.00 0.00 0.00 3.06
543 544 7.276438 CGAGAATTTGACTGAGATTGTATCACA 59.724 37.037 0.00 0.00 0.00 3.58
545 546 8.316946 AGAATTTGACTGAGATTGTATCACAGA 58.683 33.333 17.18 0.31 46.63 3.41
546 547 7.840342 ATTTGACTGAGATTGTATCACAGAC 57.160 36.000 17.18 12.75 46.63 3.51
547 548 6.596309 TTGACTGAGATTGTATCACAGACT 57.404 37.500 17.18 0.38 46.63 3.24
548 549 6.596309 TGACTGAGATTGTATCACAGACTT 57.404 37.500 17.18 0.07 46.63 3.01
549 550 6.393171 TGACTGAGATTGTATCACAGACTTG 58.607 40.000 17.18 1.60 46.63 3.16
550 551 6.015095 TGACTGAGATTGTATCACAGACTTGT 60.015 38.462 17.18 4.05 46.63 3.16
551 552 7.176690 TGACTGAGATTGTATCACAGACTTGTA 59.823 37.037 17.18 0.00 46.63 2.41
552 553 8.072321 ACTGAGATTGTATCACAGACTTGTAT 57.928 34.615 17.18 0.00 46.63 2.29
553 554 8.194104 ACTGAGATTGTATCACAGACTTGTATC 58.806 37.037 17.18 0.00 46.63 2.24
554 555 7.492524 TGAGATTGTATCACAGACTTGTATCC 58.507 38.462 0.00 0.00 35.25 2.59
555 556 7.124147 TGAGATTGTATCACAGACTTGTATCCA 59.876 37.037 0.00 0.00 35.25 3.41
556 557 7.495901 AGATTGTATCACAGACTTGTATCCAG 58.504 38.462 0.00 0.00 35.25 3.86
557 558 6.605471 TTGTATCACAGACTTGTATCCAGT 57.395 37.500 0.00 0.00 35.25 4.00
558 559 5.965922 TGTATCACAGACTTGTATCCAGTG 58.034 41.667 0.00 0.00 35.25 3.66
559 560 5.714806 TGTATCACAGACTTGTATCCAGTGA 59.285 40.000 0.00 0.00 38.06 3.41
560 561 5.946942 ATCACAGACTTGTATCCAGTGAT 57.053 39.130 0.00 0.00 38.78 3.06
561 562 5.745312 TCACAGACTTGTATCCAGTGATT 57.255 39.130 0.00 0.00 35.25 2.57
562 563 6.850752 TCACAGACTTGTATCCAGTGATTA 57.149 37.500 0.00 0.00 35.25 1.75
563 564 7.239763 TCACAGACTTGTATCCAGTGATTAA 57.760 36.000 0.00 0.00 35.25 1.40
564 565 7.851228 TCACAGACTTGTATCCAGTGATTAAT 58.149 34.615 0.00 0.00 35.25 1.40
565 566 7.981789 TCACAGACTTGTATCCAGTGATTAATC 59.018 37.037 8.60 8.60 35.25 1.75
566 567 7.225538 CACAGACTTGTATCCAGTGATTAATCC 59.774 40.741 12.90 4.63 35.25 3.01
567 568 7.126421 ACAGACTTGTATCCAGTGATTAATCCT 59.874 37.037 12.90 6.79 35.25 3.24
568 569 8.642432 CAGACTTGTATCCAGTGATTAATCCTA 58.358 37.037 12.90 0.00 32.18 2.94
569 570 8.865090 AGACTTGTATCCAGTGATTAATCCTAG 58.135 37.037 12.90 3.56 32.18 3.02
570 571 7.445945 ACTTGTATCCAGTGATTAATCCTAGC 58.554 38.462 12.90 1.39 32.18 3.42
571 572 6.025749 TGTATCCAGTGATTAATCCTAGCG 57.974 41.667 12.90 0.00 32.18 4.26
572 573 4.543590 ATCCAGTGATTAATCCTAGCGG 57.456 45.455 12.90 6.58 0.00 5.52
573 574 2.632996 TCCAGTGATTAATCCTAGCGGG 59.367 50.000 12.90 10.09 0.00 6.13
574 575 5.753845 TATCCAGTGATTAATCCTAGCGGGA 60.754 44.000 12.90 14.20 39.30 5.14
575 576 7.532888 TATCCAGTGATTAATCCTAGCGGGAG 61.533 46.154 12.90 0.00 38.79 4.30
595 596 8.560576 CGGGAGCATAACATTTTATTTTGTAG 57.439 34.615 0.00 0.00 0.00 2.74
596 597 8.188139 CGGGAGCATAACATTTTATTTTGTAGT 58.812 33.333 0.00 0.00 0.00 2.73
597 598 9.869757 GGGAGCATAACATTTTATTTTGTAGTT 57.130 29.630 0.00 0.00 0.00 2.24
651 653 4.588528 AGCCATTTTTGTACCACAGATTGT 59.411 37.500 0.00 0.00 0.00 2.71
682 684 0.249953 TTTCTACGCCGGTTTGCTCA 60.250 50.000 1.90 0.00 0.00 4.26
711 713 6.092748 CACATTTATGTTTGTGGCTTACTCC 58.907 40.000 0.00 0.00 39.39 3.85
748 750 3.876914 GGGAATGTGATACGCAGAAATGA 59.123 43.478 0.00 0.00 0.00 2.57
759 761 4.681744 ACGCAGAAATGACAATGTTTGTT 58.318 34.783 0.00 0.00 45.52 2.83
760 762 5.826586 ACGCAGAAATGACAATGTTTGTTA 58.173 33.333 0.00 0.00 45.52 2.41
761 763 5.685511 ACGCAGAAATGACAATGTTTGTTAC 59.314 36.000 0.00 0.00 45.52 2.50
762 764 5.914635 CGCAGAAATGACAATGTTTGTTACT 59.085 36.000 0.00 0.00 45.52 2.24
763 765 6.129378 CGCAGAAATGACAATGTTTGTTACTG 60.129 38.462 0.00 0.00 45.52 2.74
764 766 6.697019 GCAGAAATGACAATGTTTGTTACTGT 59.303 34.615 0.00 0.00 45.52 3.55
765 767 7.222611 GCAGAAATGACAATGTTTGTTACTGTT 59.777 33.333 0.00 0.00 45.52 3.16
766 768 9.086336 CAGAAATGACAATGTTTGTTACTGTTT 57.914 29.630 0.00 0.00 45.52 2.83
767 769 9.086336 AGAAATGACAATGTTTGTTACTGTTTG 57.914 29.630 0.00 0.00 45.52 2.93
768 770 8.770438 AAATGACAATGTTTGTTACTGTTTGT 57.230 26.923 0.00 0.00 45.52 2.83
775 777 5.704888 TGTTTGTTACTGTTTGTTCCACAG 58.295 37.500 0.00 0.00 46.18 3.66
809 811 1.811965 ATGCGTGCAAACTAGCATCAA 59.188 42.857 0.00 0.00 45.97 2.57
886 890 7.272515 CCATGCTTTTAATTTGTAGTAACGTGG 59.727 37.037 0.00 0.00 0.00 4.94
917 921 1.165270 GAAACATAAGCACACGGCCT 58.835 50.000 0.00 0.00 46.50 5.19
940 944 1.982660 TCGCACAACAATAAACCCCA 58.017 45.000 0.00 0.00 0.00 4.96
1118 1122 1.290732 CCTCTCTCTTTCCTCTCCCCT 59.709 57.143 0.00 0.00 0.00 4.79
1175 1179 8.253113 CCCATCTTTTATATATTTCCATGGTGC 58.747 37.037 12.58 0.00 0.00 5.01
1510 1517 8.824159 AATATCTGTATGTATGTGAGTTCTGC 57.176 34.615 0.00 0.00 0.00 4.26
1742 1749 1.284982 GGTATAGCCATCACGCGCTG 61.285 60.000 5.73 3.89 36.53 5.18
1782 1789 1.493861 CATCTGCTCCCTCTTCCTCA 58.506 55.000 0.00 0.00 0.00 3.86
1796 1803 0.108585 TCCTCACAACCAGTTCTGCC 59.891 55.000 0.00 0.00 0.00 4.85
1806 1816 1.433534 CAGTTCTGCCTCTTTCGTCC 58.566 55.000 0.00 0.00 0.00 4.79
1812 1822 1.514443 GCCTCTTTCGTCCTCGTCG 60.514 63.158 0.00 0.00 38.33 5.12
2030 2042 1.663702 CGGAGTTGGTGTGACGACC 60.664 63.158 0.00 0.00 36.43 4.79
2042 2054 1.255667 TGACGACCTAGGTTGGGAGC 61.256 60.000 29.27 17.06 33.94 4.70
2155 2167 4.039357 CAGCAGCAGCAGCACCAC 62.039 66.667 12.92 0.00 45.49 4.16
2158 2170 3.667282 CAGCAGCAGCACCACCAC 61.667 66.667 3.17 0.00 45.49 4.16
2159 2171 4.962836 AGCAGCAGCACCACCACC 62.963 66.667 3.17 0.00 45.49 4.61
2161 2173 3.289834 CAGCAGCACCACCACCAC 61.290 66.667 0.00 0.00 0.00 4.16
2162 2174 4.586235 AGCAGCACCACCACCACC 62.586 66.667 0.00 0.00 0.00 4.61
2163 2175 4.892965 GCAGCACCACCACCACCA 62.893 66.667 0.00 0.00 0.00 4.17
2164 2176 2.906897 CAGCACCACCACCACCAC 60.907 66.667 0.00 0.00 0.00 4.16
2165 2177 4.204028 AGCACCACCACCACCACC 62.204 66.667 0.00 0.00 0.00 4.61
2166 2178 4.514585 GCACCACCACCACCACCA 62.515 66.667 0.00 0.00 0.00 4.17
2167 2179 2.203337 CACCACCACCACCACCAG 60.203 66.667 0.00 0.00 0.00 4.00
2168 2180 4.204028 ACCACCACCACCACCAGC 62.204 66.667 0.00 0.00 0.00 4.85
2169 2181 4.202574 CCACCACCACCACCAGCA 62.203 66.667 0.00 0.00 0.00 4.41
2173 2185 3.289834 CACCACCACCAGCAGCAC 61.290 66.667 0.00 0.00 0.00 4.40
2413 2425 0.389037 TCTCTCACATGCGCACACTC 60.389 55.000 14.90 0.00 0.00 3.51
2475 2488 8.547967 TTATTTACTCAGTTACTTCCTGCTTG 57.452 34.615 0.00 0.00 0.00 4.01
2508 2521 7.147863 TGCTCGGTAGTGAATTAATACTTGGTA 60.148 37.037 0.00 0.00 30.83 3.25
2525 2538 4.471904 TGGTAGTACTGCTGGAGAATTG 57.528 45.455 10.95 0.00 0.00 2.32
2526 2539 3.198872 GGTAGTACTGCTGGAGAATTGC 58.801 50.000 10.95 0.00 0.00 3.56
2527 2540 3.369471 GGTAGTACTGCTGGAGAATTGCA 60.369 47.826 10.95 0.00 35.30 4.08
2528 2541 2.704572 AGTACTGCTGGAGAATTGCAC 58.295 47.619 2.24 0.00 32.91 4.57
2529 2542 1.394917 GTACTGCTGGAGAATTGCACG 59.605 52.381 2.24 0.00 32.91 5.34
2588 2602 2.329379 CGACAGTCTGTTCTTGCTACC 58.671 52.381 7.00 0.00 0.00 3.18
2640 2654 3.437049 CCCAGCTTGTACTCTTTTACTGC 59.563 47.826 0.00 0.00 0.00 4.40
2652 2666 9.000486 GTACTCTTTTACTGCAACTCCTTAATT 58.000 33.333 0.00 0.00 0.00 1.40
2653 2667 8.465273 ACTCTTTTACTGCAACTCCTTAATTT 57.535 30.769 0.00 0.00 0.00 1.82
2654 2668 8.568794 ACTCTTTTACTGCAACTCCTTAATTTC 58.431 33.333 0.00 0.00 0.00 2.17
2676 2690 4.898265 TCTTCTCATCTATCCCTGGTTCAG 59.102 45.833 0.00 0.00 0.00 3.02
2891 2905 1.116308 GAGTAGGCTCCTCCTTGTCC 58.884 60.000 0.00 0.00 44.75 4.02
2947 2961 1.405463 TCATCAGATCAGTCGGTTCCG 59.595 52.381 4.74 4.74 0.00 4.30
2948 2962 0.747255 ATCAGATCAGTCGGTTCCGG 59.253 55.000 11.37 0.00 0.00 5.14
3016 3032 6.700520 GGAAAGAAGAACCGTATACCATACTG 59.299 42.308 0.00 0.00 0.00 2.74
3379 3419 6.487103 CGCCTCACAGATAAGGAAAATTAAC 58.513 40.000 0.00 0.00 34.35 2.01
3399 3439 9.840427 AATTAACACTCCAACAATAAGAAATCG 57.160 29.630 0.00 0.00 0.00 3.34
3405 3445 3.425404 CAACAATAAGAAATCGCCCACG 58.575 45.455 0.00 0.00 42.01 4.94
3749 3793 2.115266 AACAAGGGGTTCCAGCGG 59.885 61.111 0.00 0.00 33.35 5.52
4121 4175 7.445945 ACCTATATACTGTCTTCTGCATTTCC 58.554 38.462 0.00 0.00 0.00 3.13
4125 4179 2.158623 ACTGTCTTCTGCATTTCCACCA 60.159 45.455 0.00 0.00 0.00 4.17
4133 4187 3.449377 TCTGCATTTCCACCACTACGATA 59.551 43.478 0.00 0.00 0.00 2.92
4197 4251 3.576356 GCATGGCGCTGCGTGTAT 61.576 61.111 24.04 12.31 37.77 2.29
4201 4257 3.327754 GGCGCTGCGTGTATACCG 61.328 66.667 24.04 4.99 0.00 4.02
4211 4267 2.868839 GCGTGTATACCGTAATGGGCAT 60.869 50.000 13.06 0.00 44.64 4.40
4240 4296 5.326900 TGGTTTAGGGTTAGGGTTTTGATC 58.673 41.667 0.00 0.00 0.00 2.92
4276 4332 3.722123 GTCGATCGACATTGTTGTTGTC 58.278 45.455 36.61 10.23 44.02 3.18
4591 4655 1.005630 GTCCAACTCGTCAGCAGCT 60.006 57.895 0.00 0.00 0.00 4.24
4627 4693 5.364157 TCTTTTACCCTCTCTCTTCCATAGC 59.636 44.000 0.00 0.00 0.00 2.97
4635 4701 5.010012 CCTCTCTCTTCCATAGCTTTCTCTC 59.990 48.000 0.00 0.00 0.00 3.20
4837 4903 2.484264 CCAGCCTAGTTGCAAGTGTAAC 59.516 50.000 17.21 4.30 40.28 2.50
4984 5051 2.719739 ACAGGAGTTGCATTCATGAGG 58.280 47.619 17.00 0.00 31.31 3.86
5177 5247 6.554334 TTTTACACATTCAACTGTAGAGGC 57.446 37.500 0.00 0.00 0.00 4.70
5590 5664 0.968405 CCCAACACCTTTGACCCATG 59.032 55.000 0.00 0.00 0.00 3.66
5620 5694 7.201530 CCAGTTTCCTAATTTTAGCACTAGTCG 60.202 40.741 0.00 0.00 0.00 4.18
5621 5695 7.544566 CAGTTTCCTAATTTTAGCACTAGTCGA 59.455 37.037 0.00 0.00 0.00 4.20
5622 5696 8.258708 AGTTTCCTAATTTTAGCACTAGTCGAT 58.741 33.333 0.00 0.00 0.00 3.59
5623 5697 8.541312 GTTTCCTAATTTTAGCACTAGTCGATC 58.459 37.037 0.00 0.00 0.00 3.69
5760 5834 6.374333 AGCTGTTTCTTTCTTTTACTGTGACA 59.626 34.615 0.00 0.00 0.00 3.58
5971 6052 3.610669 CCCGAGATGCCGCTAGCT 61.611 66.667 13.93 0.00 44.23 3.32
6093 6180 6.706270 TCTTCTCACATCAACTTTACTGTTCC 59.294 38.462 0.00 0.00 0.00 3.62
6464 6556 1.303888 CAACTCCACCCTGCAGCAT 60.304 57.895 8.66 0.00 0.00 3.79
6470 6562 3.640407 ACCCTGCAGCATGACGGT 61.640 61.111 8.66 6.20 39.69 4.83
6704 6803 1.675641 GCAGTCCAAGCCGTTCCAT 60.676 57.895 0.00 0.00 0.00 3.41
6899 7010 1.676678 GCGGTGGCTCTGAGGTATCA 61.677 60.000 6.83 0.00 35.83 2.15
7241 7381 1.451207 CGCCGGGATGTTTGATCCA 60.451 57.895 2.18 0.00 39.93 3.41
7310 7450 2.831284 GGTGTTGGTGGCAACGGT 60.831 61.111 0.00 0.00 37.86 4.83
8037 8193 6.042777 CCTAATATGTCAGCGAGTTTCTTCA 58.957 40.000 0.00 0.00 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.434884 AAGATGGAGTGCACCGCG 60.435 61.111 14.63 0.00 0.00 6.46
5 6 2.109126 GGAAGATGGAGTGCACCGC 61.109 63.158 14.63 5.94 0.00 5.68
6 7 1.021390 GTGGAAGATGGAGTGCACCG 61.021 60.000 14.63 0.00 30.53 4.94
7 8 1.021390 CGTGGAAGATGGAGTGCACC 61.021 60.000 14.63 4.90 32.93 5.01
8 9 0.320771 ACGTGGAAGATGGAGTGCAC 60.321 55.000 9.40 9.40 33.19 4.57
9 10 0.320683 CACGTGGAAGATGGAGTGCA 60.321 55.000 7.95 0.00 0.00 4.57
10 11 0.320771 ACACGTGGAAGATGGAGTGC 60.321 55.000 21.57 0.00 33.36 4.40
11 12 1.673033 GGACACGTGGAAGATGGAGTG 60.673 57.143 21.57 0.00 35.89 3.51
12 13 0.608640 GGACACGTGGAAGATGGAGT 59.391 55.000 21.57 0.00 0.00 3.85
13 14 0.108138 GGGACACGTGGAAGATGGAG 60.108 60.000 21.57 0.00 0.00 3.86
14 15 0.834261 TGGGACACGTGGAAGATGGA 60.834 55.000 21.57 0.00 0.00 3.41
15 16 0.391661 CTGGGACACGTGGAAGATGG 60.392 60.000 21.57 0.00 0.00 3.51
16 17 1.021390 GCTGGGACACGTGGAAGATG 61.021 60.000 21.57 6.44 0.00 2.90
17 18 1.194781 AGCTGGGACACGTGGAAGAT 61.195 55.000 21.57 7.23 0.00 2.40
18 19 1.407656 AAGCTGGGACACGTGGAAGA 61.408 55.000 21.57 0.00 0.00 2.87
19 20 0.951040 GAAGCTGGGACACGTGGAAG 60.951 60.000 21.57 12.03 0.00 3.46
20 21 1.070786 GAAGCTGGGACACGTGGAA 59.929 57.895 21.57 0.91 0.00 3.53
21 22 2.741092 GAAGCTGGGACACGTGGA 59.259 61.111 21.57 0.00 0.00 4.02
22 23 2.738521 CGAAGCTGGGACACGTGG 60.739 66.667 21.57 2.06 0.00 4.94
23 24 2.022129 GTCGAAGCTGGGACACGTG 61.022 63.158 15.48 15.48 33.41 4.49
24 25 2.023414 TTGTCGAAGCTGGGACACGT 62.023 55.000 17.06 0.00 42.43 4.49
25 26 1.284982 CTTGTCGAAGCTGGGACACG 61.285 60.000 17.06 12.75 42.43 4.49
26 27 2.533318 CTTGTCGAAGCTGGGACAC 58.467 57.895 17.06 0.00 42.43 3.67
35 36 1.341606 GGACGAAGAGCTTGTCGAAG 58.658 55.000 22.30 0.00 39.64 3.79
36 37 0.386858 CGGACGAAGAGCTTGTCGAA 60.387 55.000 22.30 0.00 39.64 3.71
37 38 1.209383 CGGACGAAGAGCTTGTCGA 59.791 57.895 22.30 0.00 39.64 4.20
38 39 1.066114 GTCGGACGAAGAGCTTGTCG 61.066 60.000 15.96 15.96 42.91 4.35
39 40 1.066114 CGTCGGACGAAGAGCTTGTC 61.066 60.000 25.29 0.00 46.05 3.18
40 41 1.081376 CGTCGGACGAAGAGCTTGT 60.081 57.895 25.29 0.00 46.05 3.16
41 42 1.801913 CCGTCGGACGAAGAGCTTG 60.802 63.158 30.33 8.33 46.05 4.01
42 43 1.521450 TTCCGTCGGACGAAGAGCTT 61.521 55.000 30.33 0.00 46.05 3.74
43 44 1.970114 TTCCGTCGGACGAAGAGCT 60.970 57.895 30.33 0.00 46.05 4.09
44 45 1.800713 GTTCCGTCGGACGAAGAGC 60.801 63.158 30.33 17.81 46.05 4.09
45 46 0.454620 CAGTTCCGTCGGACGAAGAG 60.455 60.000 30.33 14.39 46.05 2.85
46 47 1.577922 CAGTTCCGTCGGACGAAGA 59.422 57.895 30.33 17.50 46.05 2.87
47 48 1.443872 CCAGTTCCGTCGGACGAAG 60.444 63.158 30.33 15.46 46.05 3.79
48 49 2.195567 ACCAGTTCCGTCGGACGAA 61.196 57.895 30.33 18.95 46.05 3.85
49 50 2.595463 ACCAGTTCCGTCGGACGA 60.595 61.111 30.33 14.36 46.05 4.20
50 51 2.430244 CACCAGTTCCGTCGGACG 60.430 66.667 22.88 22.88 42.11 4.79
51 52 2.737376 GCACCAGTTCCGTCGGAC 60.737 66.667 15.07 9.53 0.00 4.79
52 53 2.709125 CTTGCACCAGTTCCGTCGGA 62.709 60.000 10.71 10.71 0.00 4.55
53 54 2.280524 TTGCACCAGTTCCGTCGG 60.281 61.111 4.39 4.39 0.00 4.79
54 55 1.284982 CTCTTGCACCAGTTCCGTCG 61.285 60.000 0.00 0.00 0.00 5.12
55 56 1.569479 GCTCTTGCACCAGTTCCGTC 61.569 60.000 0.00 0.00 39.41 4.79
56 57 1.598130 GCTCTTGCACCAGTTCCGT 60.598 57.895 0.00 0.00 39.41 4.69
57 58 1.597854 TGCTCTTGCACCAGTTCCG 60.598 57.895 0.00 0.00 45.31 4.30
58 59 4.481195 TGCTCTTGCACCAGTTCC 57.519 55.556 0.00 0.00 45.31 3.62
67 68 0.240411 CTGCCAGAAGTTGCTCTTGC 59.760 55.000 0.00 0.00 36.40 4.01
68 69 0.240411 GCTGCCAGAAGTTGCTCTTG 59.760 55.000 0.00 0.00 36.40 3.02
69 70 1.233285 CGCTGCCAGAAGTTGCTCTT 61.233 55.000 0.00 0.00 39.32 2.85
70 71 1.670406 CGCTGCCAGAAGTTGCTCT 60.670 57.895 0.00 0.00 0.00 4.09
71 72 2.684843 CCGCTGCCAGAAGTTGCTC 61.685 63.158 0.00 0.00 0.00 4.26
72 73 2.670934 CCGCTGCCAGAAGTTGCT 60.671 61.111 0.00 0.00 0.00 3.91
73 74 4.410743 GCCGCTGCCAGAAGTTGC 62.411 66.667 0.00 0.00 0.00 4.17
74 75 2.974489 CTGCCGCTGCCAGAAGTTG 61.974 63.158 0.00 0.00 36.33 3.16
75 76 2.670934 CTGCCGCTGCCAGAAGTT 60.671 61.111 0.00 0.00 36.33 2.66
90 91 1.750399 ATTGTAGGGCTTGCCGCTG 60.750 57.895 5.49 0.00 37.31 5.18
91 92 1.750399 CATTGTAGGGCTTGCCGCT 60.750 57.895 5.49 6.70 40.26 5.52
92 93 2.774799 CCATTGTAGGGCTTGCCGC 61.775 63.158 5.49 0.00 38.13 6.53
93 94 0.679640 TTCCATTGTAGGGCTTGCCG 60.680 55.000 5.49 0.00 0.00 5.69
94 95 1.106285 CTTCCATTGTAGGGCTTGCC 58.894 55.000 2.49 2.49 0.00 4.52
95 96 2.128771 TCTTCCATTGTAGGGCTTGC 57.871 50.000 0.00 0.00 0.00 4.01
96 97 3.690460 ACTTCTTCCATTGTAGGGCTTG 58.310 45.455 0.00 0.00 0.00 4.01
97 98 4.536489 AGTACTTCTTCCATTGTAGGGCTT 59.464 41.667 0.00 0.00 0.00 4.35
98 99 4.104831 AGTACTTCTTCCATTGTAGGGCT 58.895 43.478 0.00 0.00 0.00 5.19
99 100 4.489306 AGTACTTCTTCCATTGTAGGGC 57.511 45.455 0.00 0.00 0.00 5.19
100 101 6.834451 TCTCTAGTACTTCTTCCATTGTAGGG 59.166 42.308 0.00 0.00 0.00 3.53
101 102 7.883391 TCTCTAGTACTTCTTCCATTGTAGG 57.117 40.000 0.00 0.00 0.00 3.18
102 103 9.575783 GTTTCTCTAGTACTTCTTCCATTGTAG 57.424 37.037 0.00 0.00 0.00 2.74
103 104 8.242053 CGTTTCTCTAGTACTTCTTCCATTGTA 58.758 37.037 0.00 0.00 0.00 2.41
104 105 7.039923 TCGTTTCTCTAGTACTTCTTCCATTGT 60.040 37.037 0.00 0.00 0.00 2.71
105 106 7.313646 TCGTTTCTCTAGTACTTCTTCCATTG 58.686 38.462 0.00 0.00 0.00 2.82
106 107 7.177041 ACTCGTTTCTCTAGTACTTCTTCCATT 59.823 37.037 0.00 0.00 0.00 3.16
107 108 6.660094 ACTCGTTTCTCTAGTACTTCTTCCAT 59.340 38.462 0.00 0.00 0.00 3.41
108 109 6.002704 ACTCGTTTCTCTAGTACTTCTTCCA 58.997 40.000 0.00 0.00 0.00 3.53
109 110 6.316319 CACTCGTTTCTCTAGTACTTCTTCC 58.684 44.000 0.00 0.00 0.00 3.46
110 111 6.072563 ACCACTCGTTTCTCTAGTACTTCTTC 60.073 42.308 0.00 0.00 0.00 2.87
111 112 5.769162 ACCACTCGTTTCTCTAGTACTTCTT 59.231 40.000 0.00 0.00 0.00 2.52
112 113 5.315348 ACCACTCGTTTCTCTAGTACTTCT 58.685 41.667 0.00 0.00 0.00 2.85
113 114 5.625921 ACCACTCGTTTCTCTAGTACTTC 57.374 43.478 0.00 0.00 0.00 3.01
114 115 5.533903 TGAACCACTCGTTTCTCTAGTACTT 59.466 40.000 0.00 0.00 33.74 2.24
115 116 5.068636 TGAACCACTCGTTTCTCTAGTACT 58.931 41.667 0.00 0.00 33.74 2.73
116 117 5.368256 TGAACCACTCGTTTCTCTAGTAC 57.632 43.478 0.00 0.00 33.74 2.73
117 118 5.300034 TGTTGAACCACTCGTTTCTCTAGTA 59.700 40.000 0.00 0.00 33.74 1.82
118 119 4.098960 TGTTGAACCACTCGTTTCTCTAGT 59.901 41.667 0.00 0.00 33.74 2.57
119 120 4.617959 TGTTGAACCACTCGTTTCTCTAG 58.382 43.478 0.00 0.00 33.74 2.43
120 121 4.659111 TGTTGAACCACTCGTTTCTCTA 57.341 40.909 0.00 0.00 33.74 2.43
121 122 3.536956 TGTTGAACCACTCGTTTCTCT 57.463 42.857 0.00 0.00 33.74 3.10
122 123 3.058914 CCATGTTGAACCACTCGTTTCTC 60.059 47.826 0.00 0.00 33.74 2.87
123 124 2.878406 CCATGTTGAACCACTCGTTTCT 59.122 45.455 0.00 0.00 33.74 2.52
124 125 2.604614 GCCATGTTGAACCACTCGTTTC 60.605 50.000 0.00 0.00 33.74 2.78
125 126 1.336755 GCCATGTTGAACCACTCGTTT 59.663 47.619 0.00 0.00 33.74 3.60
126 127 0.951558 GCCATGTTGAACCACTCGTT 59.048 50.000 0.00 0.00 37.41 3.85
127 128 0.179032 TGCCATGTTGAACCACTCGT 60.179 50.000 0.00 0.00 0.00 4.18
128 129 0.950836 TTGCCATGTTGAACCACTCG 59.049 50.000 0.00 0.00 0.00 4.18
129 130 2.927871 GCATTGCCATGTTGAACCACTC 60.928 50.000 0.00 0.00 32.28 3.51
130 131 1.001181 GCATTGCCATGTTGAACCACT 59.999 47.619 0.00 0.00 32.28 4.00
131 132 1.431496 GCATTGCCATGTTGAACCAC 58.569 50.000 0.00 0.00 32.28 4.16
132 133 0.038435 CGCATTGCCATGTTGAACCA 60.038 50.000 2.41 0.00 32.28 3.67
133 134 0.243365 TCGCATTGCCATGTTGAACC 59.757 50.000 2.41 0.00 32.28 3.62
134 135 1.921887 CATCGCATTGCCATGTTGAAC 59.078 47.619 7.95 0.00 32.28 3.18
135 136 1.135053 CCATCGCATTGCCATGTTGAA 60.135 47.619 13.99 0.00 32.28 2.69
136 137 0.456628 CCATCGCATTGCCATGTTGA 59.543 50.000 13.99 0.39 32.28 3.18
137 138 0.173935 ACCATCGCATTGCCATGTTG 59.826 50.000 13.99 3.81 32.28 3.33
138 139 0.173935 CACCATCGCATTGCCATGTT 59.826 50.000 13.99 0.00 32.28 2.71
139 140 1.811195 CACCATCGCATTGCCATGT 59.189 52.632 13.99 1.59 32.28 3.21
140 141 1.590525 GCACCATCGCATTGCCATG 60.591 57.895 9.04 9.04 0.00 3.66
141 142 2.809706 GCACCATCGCATTGCCAT 59.190 55.556 2.41 0.00 0.00 4.40
144 145 1.936436 TTGAGGCACCATCGCATTGC 61.936 55.000 0.00 0.00 35.40 3.56
145 146 0.099968 CTTGAGGCACCATCGCATTG 59.900 55.000 0.00 0.00 0.00 2.82
146 147 1.033746 CCTTGAGGCACCATCGCATT 61.034 55.000 0.00 0.00 0.00 3.56
147 148 1.452651 CCTTGAGGCACCATCGCAT 60.453 57.895 0.00 0.00 0.00 4.73
148 149 2.046023 CCTTGAGGCACCATCGCA 60.046 61.111 0.00 0.00 0.00 5.10
149 150 2.045926 ACCTTGAGGCACCATCGC 60.046 61.111 0.00 0.00 39.32 4.58
150 151 0.742281 CAGACCTTGAGGCACCATCG 60.742 60.000 0.00 0.00 39.32 3.84
151 152 0.393537 CCAGACCTTGAGGCACCATC 60.394 60.000 0.00 0.00 39.32 3.51
152 153 1.136329 ACCAGACCTTGAGGCACCAT 61.136 55.000 0.00 0.00 39.32 3.55
153 154 1.768684 GACCAGACCTTGAGGCACCA 61.769 60.000 0.00 0.00 39.32 4.17
154 155 1.003233 GACCAGACCTTGAGGCACC 60.003 63.158 0.00 0.00 39.32 5.01
155 156 1.003233 GGACCAGACCTTGAGGCAC 60.003 63.158 0.00 0.00 39.32 5.01
156 157 2.583441 CGGACCAGACCTTGAGGCA 61.583 63.158 0.00 0.00 39.32 4.75
157 158 2.113243 AACGGACCAGACCTTGAGGC 62.113 60.000 0.00 0.00 39.32 4.70
158 159 0.320771 CAACGGACCAGACCTTGAGG 60.321 60.000 0.00 0.00 42.17 3.86
159 160 0.320771 CCAACGGACCAGACCTTGAG 60.321 60.000 0.00 0.00 0.00 3.02
160 161 0.761323 TCCAACGGACCAGACCTTGA 60.761 55.000 0.00 0.00 0.00 3.02
161 162 0.602905 GTCCAACGGACCAGACCTTG 60.603 60.000 1.47 0.00 46.19 3.61
162 163 1.752833 GTCCAACGGACCAGACCTT 59.247 57.895 1.47 0.00 46.19 3.50
163 164 3.468063 GTCCAACGGACCAGACCT 58.532 61.111 1.47 0.00 46.19 3.85
176 177 4.308458 CGGCGGTTGGTGAGTCCA 62.308 66.667 0.00 0.00 45.60 4.02
178 179 3.934391 CTCCGGCGGTTGGTGAGTC 62.934 68.421 27.32 0.00 0.00 3.36
179 180 4.003788 CTCCGGCGGTTGGTGAGT 62.004 66.667 27.32 0.00 0.00 3.41
180 181 3.530910 AACTCCGGCGGTTGGTGAG 62.531 63.158 27.32 17.05 0.00 3.51
181 182 3.524648 GAACTCCGGCGGTTGGTGA 62.525 63.158 27.32 3.85 0.00 4.02
182 183 3.047877 GAACTCCGGCGGTTGGTG 61.048 66.667 27.32 13.94 0.00 4.17
183 184 4.675029 CGAACTCCGGCGGTTGGT 62.675 66.667 27.32 18.71 33.91 3.67
191 192 4.760047 CCAGGTGGCGAACTCCGG 62.760 72.222 0.00 0.00 37.80 5.14
192 193 4.760047 CCCAGGTGGCGAACTCCG 62.760 72.222 0.00 0.00 37.80 4.63
193 194 3.316573 CTCCCAGGTGGCGAACTCC 62.317 68.421 0.00 0.00 0.00 3.85
194 195 2.266055 CTCCCAGGTGGCGAACTC 59.734 66.667 0.00 0.00 0.00 3.01
195 196 3.322466 CCTCCCAGGTGGCGAACT 61.322 66.667 0.00 0.00 0.00 3.01
196 197 2.595009 GATCCTCCCAGGTGGCGAAC 62.595 65.000 0.00 0.00 36.53 3.95
197 198 2.285368 ATCCTCCCAGGTGGCGAA 60.285 61.111 0.00 0.00 36.53 4.70
198 199 2.764128 GATCCTCCCAGGTGGCGA 60.764 66.667 0.00 0.00 36.53 5.54
199 200 4.227134 CGATCCTCCCAGGTGGCG 62.227 72.222 0.00 0.00 36.53 5.69
200 201 4.554036 GCGATCCTCCCAGGTGGC 62.554 72.222 0.00 0.00 36.53 5.01
201 202 4.227134 CGCGATCCTCCCAGGTGG 62.227 72.222 0.00 0.00 36.53 4.61
202 203 4.899239 GCGCGATCCTCCCAGGTG 62.899 72.222 12.10 0.00 36.53 4.00
209 210 4.992294 GAGCTCGGCGCGATCCTC 62.992 72.222 12.10 3.47 45.59 3.71
219 220 0.809241 GAAGTGATGCTGGAGCTCGG 60.809 60.000 7.83 4.25 42.66 4.63
220 221 0.809241 GGAAGTGATGCTGGAGCTCG 60.809 60.000 7.83 0.00 42.66 5.03
221 222 0.463474 GGGAAGTGATGCTGGAGCTC 60.463 60.000 4.71 4.71 42.66 4.09
222 223 1.606531 GGGAAGTGATGCTGGAGCT 59.393 57.895 0.00 0.00 42.66 4.09
223 224 1.817099 CGGGAAGTGATGCTGGAGC 60.817 63.158 0.00 0.00 42.50 4.70
224 225 0.250234 TTCGGGAAGTGATGCTGGAG 59.750 55.000 0.00 0.00 0.00 3.86
225 226 0.690192 TTTCGGGAAGTGATGCTGGA 59.310 50.000 0.00 0.00 0.00 3.86
226 227 1.089920 CTTTCGGGAAGTGATGCTGG 58.910 55.000 0.00 0.00 0.00 4.85
227 228 0.449388 GCTTTCGGGAAGTGATGCTG 59.551 55.000 0.00 0.00 37.69 4.41
228 229 0.326264 AGCTTTCGGGAAGTGATGCT 59.674 50.000 0.00 0.00 37.69 3.79
229 230 0.729690 GAGCTTTCGGGAAGTGATGC 59.270 55.000 0.00 0.00 37.69 3.91
230 231 1.339055 TGGAGCTTTCGGGAAGTGATG 60.339 52.381 0.00 0.00 37.69 3.07
231 232 0.984230 TGGAGCTTTCGGGAAGTGAT 59.016 50.000 0.00 0.00 37.69 3.06
232 233 0.321671 CTGGAGCTTTCGGGAAGTGA 59.678 55.000 0.00 0.00 37.69 3.41
233 234 1.301677 GCTGGAGCTTTCGGGAAGTG 61.302 60.000 0.00 0.00 37.69 3.16
234 235 1.003233 GCTGGAGCTTTCGGGAAGT 60.003 57.895 0.00 0.00 37.69 3.01
235 236 3.896479 GCTGGAGCTTTCGGGAAG 58.104 61.111 0.00 0.00 38.21 3.46
245 246 4.684134 TTGGCCCCAAGCTGGAGC 62.684 66.667 0.00 2.44 40.96 4.70
246 247 2.118076 TTTGGCCCCAAGCTGGAG 59.882 61.111 0.00 0.00 40.96 3.86
247 248 1.431195 TAGTTTGGCCCCAAGCTGGA 61.431 55.000 21.89 4.82 44.87 3.86
248 249 0.324645 ATAGTTTGGCCCCAAGCTGG 60.325 55.000 21.89 0.00 44.87 4.85
249 250 0.819582 CATAGTTTGGCCCCAAGCTG 59.180 55.000 21.89 7.48 44.87 4.24
250 251 0.409484 ACATAGTTTGGCCCCAAGCT 59.591 50.000 18.34 18.34 46.42 3.74
251 252 0.817654 GACATAGTTTGGCCCCAAGC 59.182 55.000 0.00 5.84 42.60 4.01
252 253 2.369394 GAGACATAGTTTGGCCCCAAG 58.631 52.381 0.00 0.00 37.24 3.61
253 254 1.339631 CGAGACATAGTTTGGCCCCAA 60.340 52.381 0.00 0.00 31.49 4.12
254 255 0.251916 CGAGACATAGTTTGGCCCCA 59.748 55.000 0.00 0.00 31.49 4.96
255 256 0.539986 TCGAGACATAGTTTGGCCCC 59.460 55.000 0.00 0.00 31.49 5.80
256 257 1.473434 CCTCGAGACATAGTTTGGCCC 60.473 57.143 15.71 0.00 31.49 5.80
257 258 1.473434 CCCTCGAGACATAGTTTGGCC 60.473 57.143 15.71 0.00 31.49 5.36
258 259 1.473434 CCCCTCGAGACATAGTTTGGC 60.473 57.143 15.71 0.00 0.00 4.52
259 260 1.139058 CCCCCTCGAGACATAGTTTGG 59.861 57.143 15.71 2.56 0.00 3.28
260 261 2.101582 CTCCCCCTCGAGACATAGTTTG 59.898 54.545 15.71 0.00 30.97 2.93
261 262 2.389715 CTCCCCCTCGAGACATAGTTT 58.610 52.381 15.71 0.00 30.97 2.66
262 263 1.411787 CCTCCCCCTCGAGACATAGTT 60.412 57.143 15.71 0.00 30.97 2.24
263 264 0.186386 CCTCCCCCTCGAGACATAGT 59.814 60.000 15.71 0.00 30.97 2.12
264 265 0.540830 CCCTCCCCCTCGAGACATAG 60.541 65.000 15.71 5.95 30.97 2.23
265 266 1.294426 ACCCTCCCCCTCGAGACATA 61.294 60.000 15.71 0.00 30.97 2.29
266 267 1.294426 TACCCTCCCCCTCGAGACAT 61.294 60.000 15.71 0.00 30.97 3.06
267 268 1.294426 ATACCCTCCCCCTCGAGACA 61.294 60.000 15.71 0.00 30.97 3.41
268 269 0.828343 CATACCCTCCCCCTCGAGAC 60.828 65.000 15.71 0.00 30.97 3.36
269 270 1.294426 ACATACCCTCCCCCTCGAGA 61.294 60.000 15.71 0.00 30.97 4.04
270 271 0.398664 AACATACCCTCCCCCTCGAG 60.399 60.000 5.13 5.13 0.00 4.04
271 272 0.935942 TAACATACCCTCCCCCTCGA 59.064 55.000 0.00 0.00 0.00 4.04
272 273 1.046204 GTAACATACCCTCCCCCTCG 58.954 60.000 0.00 0.00 0.00 4.63
273 274 1.046204 CGTAACATACCCTCCCCCTC 58.954 60.000 0.00 0.00 0.00 4.30
274 275 1.052694 GCGTAACATACCCTCCCCCT 61.053 60.000 0.00 0.00 0.00 4.79
275 276 1.448924 GCGTAACATACCCTCCCCC 59.551 63.158 0.00 0.00 0.00 5.40
276 277 1.448924 GGCGTAACATACCCTCCCC 59.551 63.158 0.00 0.00 0.00 4.81
277 278 1.448924 GGGCGTAACATACCCTCCC 59.551 63.158 0.00 0.00 40.75 4.30
281 282 2.011947 GACAAAGGGCGTAACATACCC 58.988 52.381 0.00 0.00 44.62 3.69
282 283 2.011947 GGACAAAGGGCGTAACATACC 58.988 52.381 0.00 0.00 0.00 2.73
283 284 2.702261 TGGACAAAGGGCGTAACATAC 58.298 47.619 0.00 0.00 0.00 2.39
284 285 3.537580 GATGGACAAAGGGCGTAACATA 58.462 45.455 0.00 0.00 0.00 2.29
285 286 2.365582 GATGGACAAAGGGCGTAACAT 58.634 47.619 0.00 0.00 0.00 2.71
286 287 1.612199 GGATGGACAAAGGGCGTAACA 60.612 52.381 0.00 0.00 0.00 2.41
287 288 1.092348 GGATGGACAAAGGGCGTAAC 58.908 55.000 0.00 0.00 0.00 2.50
288 289 0.391927 CGGATGGACAAAGGGCGTAA 60.392 55.000 0.00 0.00 0.00 3.18
289 290 1.219664 CGGATGGACAAAGGGCGTA 59.780 57.895 0.00 0.00 0.00 4.42
290 291 2.046314 CGGATGGACAAAGGGCGT 60.046 61.111 0.00 0.00 0.00 5.68
291 292 2.046314 ACGGATGGACAAAGGGCG 60.046 61.111 0.00 0.00 0.00 6.13
292 293 1.749258 GGACGGATGGACAAAGGGC 60.749 63.158 0.00 0.00 0.00 5.19
293 294 1.077716 GGGACGGATGGACAAAGGG 60.078 63.158 0.00 0.00 0.00 3.95
294 295 0.676782 GTGGGACGGATGGACAAAGG 60.677 60.000 0.00 0.00 0.00 3.11
295 296 0.676782 GGTGGGACGGATGGACAAAG 60.677 60.000 0.00 0.00 0.00 2.77
296 297 1.131303 AGGTGGGACGGATGGACAAA 61.131 55.000 0.00 0.00 0.00 2.83
297 298 1.537889 AGGTGGGACGGATGGACAA 60.538 57.895 0.00 0.00 0.00 3.18
298 299 2.121832 AGGTGGGACGGATGGACA 59.878 61.111 0.00 0.00 0.00 4.02
299 300 2.584608 CAGGTGGGACGGATGGAC 59.415 66.667 0.00 0.00 0.00 4.02
300 301 3.399181 GCAGGTGGGACGGATGGA 61.399 66.667 0.00 0.00 0.00 3.41
301 302 3.687321 CTGCAGGTGGGACGGATGG 62.687 68.421 5.57 0.00 0.00 3.51
302 303 2.124983 CTGCAGGTGGGACGGATG 60.125 66.667 5.57 0.00 0.00 3.51
303 304 2.284625 TCTGCAGGTGGGACGGAT 60.285 61.111 15.13 0.00 0.00 4.18
304 305 2.997315 CTCTGCAGGTGGGACGGA 60.997 66.667 15.13 0.00 0.00 4.69
305 306 4.767255 GCTCTGCAGGTGGGACGG 62.767 72.222 15.13 0.00 0.00 4.79
306 307 4.767255 GGCTCTGCAGGTGGGACG 62.767 72.222 15.13 0.00 0.00 4.79
307 308 2.883267 GATGGCTCTGCAGGTGGGAC 62.883 65.000 15.13 4.89 0.00 4.46
308 309 2.611800 ATGGCTCTGCAGGTGGGA 60.612 61.111 15.13 0.00 0.00 4.37
309 310 2.124403 GATGGCTCTGCAGGTGGG 60.124 66.667 15.13 3.32 0.00 4.61
310 311 2.124403 GGATGGCTCTGCAGGTGG 60.124 66.667 15.13 5.90 0.00 4.61
311 312 1.001764 TTGGATGGCTCTGCAGGTG 60.002 57.895 15.13 8.56 0.00 4.00
312 313 1.302285 CTTGGATGGCTCTGCAGGT 59.698 57.895 15.13 0.00 0.00 4.00
313 314 1.453379 CCTTGGATGGCTCTGCAGG 60.453 63.158 15.13 5.82 0.00 4.85
314 315 1.453379 CCCTTGGATGGCTCTGCAG 60.453 63.158 7.63 7.63 0.00 4.41
315 316 1.924939 TCCCTTGGATGGCTCTGCA 60.925 57.895 0.00 0.00 0.00 4.41
316 317 1.452833 GTCCCTTGGATGGCTCTGC 60.453 63.158 0.00 0.00 32.73 4.26
317 318 1.153289 CGTCCCTTGGATGGCTCTG 60.153 63.158 0.00 0.00 35.25 3.35
318 319 3.313874 CGTCCCTTGGATGGCTCT 58.686 61.111 0.00 0.00 35.25 4.09
323 324 2.046285 GTTGGCCGTCCCTTGGATG 61.046 63.158 0.00 0.00 38.38 3.51
324 325 2.075355 TTGTTGGCCGTCCCTTGGAT 62.075 55.000 0.00 0.00 32.73 3.41
325 326 2.758207 TTGTTGGCCGTCCCTTGGA 61.758 57.895 0.00 0.00 0.00 3.53
326 327 2.203422 TTGTTGGCCGTCCCTTGG 60.203 61.111 0.00 0.00 0.00 3.61
327 328 0.250553 TAGTTGTTGGCCGTCCCTTG 60.251 55.000 0.00 0.00 0.00 3.61
328 329 0.250597 GTAGTTGTTGGCCGTCCCTT 60.251 55.000 0.00 0.00 0.00 3.95
329 330 1.373812 GTAGTTGTTGGCCGTCCCT 59.626 57.895 0.00 0.00 0.00 4.20
330 331 1.673337 GGTAGTTGTTGGCCGTCCC 60.673 63.158 0.00 0.00 0.00 4.46
331 332 1.673337 GGGTAGTTGTTGGCCGTCC 60.673 63.158 0.00 0.00 0.00 4.79
332 333 1.673337 GGGGTAGTTGTTGGCCGTC 60.673 63.158 0.00 0.00 0.00 4.79
333 334 0.837260 TAGGGGTAGTTGTTGGCCGT 60.837 55.000 0.00 0.00 0.00 5.68
334 335 0.392060 GTAGGGGTAGTTGTTGGCCG 60.392 60.000 0.00 0.00 0.00 6.13
335 336 0.989602 AGTAGGGGTAGTTGTTGGCC 59.010 55.000 0.00 0.00 0.00 5.36
336 337 1.339727 CCAGTAGGGGTAGTTGTTGGC 60.340 57.143 0.00 0.00 0.00 4.52
337 338 2.781681 CCAGTAGGGGTAGTTGTTGG 57.218 55.000 0.00 0.00 0.00 3.77
349 350 1.405821 CTGTCGTTCTAGCCCAGTAGG 59.594 57.143 0.00 0.00 39.47 3.18
350 351 1.202313 GCTGTCGTTCTAGCCCAGTAG 60.202 57.143 0.00 0.00 33.89 2.57
351 352 0.815734 GCTGTCGTTCTAGCCCAGTA 59.184 55.000 0.00 0.00 33.89 2.74
352 353 1.592223 GCTGTCGTTCTAGCCCAGT 59.408 57.895 0.00 0.00 33.89 4.00
353 354 4.504132 GCTGTCGTTCTAGCCCAG 57.496 61.111 0.00 0.00 33.89 4.45
357 358 2.202756 CGGGGCTGTCGTTCTAGC 60.203 66.667 0.00 0.00 39.17 3.42
358 359 1.139095 GACGGGGCTGTCGTTCTAG 59.861 63.158 3.17 0.00 41.22 2.43
359 360 2.345760 GGACGGGGCTGTCGTTCTA 61.346 63.158 4.75 0.00 41.22 2.10
360 361 3.692406 GGACGGGGCTGTCGTTCT 61.692 66.667 4.75 0.00 41.22 3.01
361 362 3.998672 TGGACGGGGCTGTCGTTC 61.999 66.667 4.75 2.96 41.22 3.95
362 363 4.309950 GTGGACGGGGCTGTCGTT 62.310 66.667 4.75 0.00 41.22 3.85
374 375 2.766651 TATCGGGCTGGGGTGGAC 60.767 66.667 0.00 0.00 0.00 4.02
375 376 2.445845 CTATCGGGCTGGGGTGGA 60.446 66.667 0.00 0.00 0.00 4.02
376 377 2.768344 ACTATCGGGCTGGGGTGG 60.768 66.667 0.00 0.00 0.00 4.61
377 378 2.311688 GACACTATCGGGCTGGGGTG 62.312 65.000 10.83 10.83 0.00 4.61
378 379 2.040606 ACACTATCGGGCTGGGGT 59.959 61.111 0.00 0.00 0.00 4.95
379 380 1.762460 AGACACTATCGGGCTGGGG 60.762 63.158 0.00 0.00 0.00 4.96
380 381 1.443407 CAGACACTATCGGGCTGGG 59.557 63.158 0.00 0.00 0.00 4.45
381 382 1.443407 CCAGACACTATCGGGCTGG 59.557 63.158 0.00 0.00 40.03 4.85
382 383 1.043116 TCCCAGACACTATCGGGCTG 61.043 60.000 0.00 0.00 41.13 4.85
383 384 1.043673 GTCCCAGACACTATCGGGCT 61.044 60.000 0.00 0.00 41.13 5.19
384 385 1.327690 TGTCCCAGACACTATCGGGC 61.328 60.000 0.00 0.00 41.13 6.13
385 386 2.896278 TGTCCCAGACACTATCGGG 58.104 57.895 0.00 0.00 42.07 5.14
398 399 4.065281 CCAGTCGGGTCGTGTCCC 62.065 72.222 3.68 3.68 43.78 4.46
407 408 2.038033 TGTTTCCTCTTAACCAGTCGGG 59.962 50.000 0.00 0.00 44.81 5.14
408 409 3.006537 TCTGTTTCCTCTTAACCAGTCGG 59.993 47.826 0.00 0.00 38.77 4.79
409 410 3.988517 GTCTGTTTCCTCTTAACCAGTCG 59.011 47.826 0.00 0.00 0.00 4.18
410 411 4.316645 GGTCTGTTTCCTCTTAACCAGTC 58.683 47.826 0.00 0.00 0.00 3.51
411 412 3.072622 GGGTCTGTTTCCTCTTAACCAGT 59.927 47.826 0.00 0.00 0.00 4.00
412 413 3.559384 GGGGTCTGTTTCCTCTTAACCAG 60.559 52.174 0.00 0.00 0.00 4.00
413 414 2.374170 GGGGTCTGTTTCCTCTTAACCA 59.626 50.000 0.00 0.00 0.00 3.67
414 415 2.643304 AGGGGTCTGTTTCCTCTTAACC 59.357 50.000 0.00 0.00 30.63 2.85
415 416 3.307550 GGAGGGGTCTGTTTCCTCTTAAC 60.308 52.174 8.28 0.00 44.72 2.01
416 417 2.910977 GGAGGGGTCTGTTTCCTCTTAA 59.089 50.000 8.28 0.00 44.72 1.85
417 418 2.113777 AGGAGGGGTCTGTTTCCTCTTA 59.886 50.000 8.28 0.00 44.72 2.10
418 419 1.132365 AGGAGGGGTCTGTTTCCTCTT 60.132 52.381 8.28 0.00 44.72 2.85
419 420 0.494095 AGGAGGGGTCTGTTTCCTCT 59.506 55.000 8.28 0.00 44.72 3.69
420 421 0.615850 CAGGAGGGGTCTGTTTCCTC 59.384 60.000 0.00 0.00 44.64 3.71
421 422 0.842467 CCAGGAGGGGTCTGTTTCCT 60.842 60.000 0.00 0.00 40.63 3.36
422 423 1.685820 CCAGGAGGGGTCTGTTTCC 59.314 63.158 0.00 0.00 0.00 3.13
437 438 0.898320 ATTCTCGTCACCTCACCCAG 59.102 55.000 0.00 0.00 0.00 4.45
438 439 0.608130 CATTCTCGTCACCTCACCCA 59.392 55.000 0.00 0.00 0.00 4.51
439 440 0.608640 ACATTCTCGTCACCTCACCC 59.391 55.000 0.00 0.00 0.00 4.61
440 441 2.492484 AGTACATTCTCGTCACCTCACC 59.508 50.000 0.00 0.00 0.00 4.02
441 442 3.851976 AGTACATTCTCGTCACCTCAC 57.148 47.619 0.00 0.00 0.00 3.51
442 443 3.945921 CCTAGTACATTCTCGTCACCTCA 59.054 47.826 0.00 0.00 0.00 3.86
443 444 3.946558 ACCTAGTACATTCTCGTCACCTC 59.053 47.826 0.00 0.00 0.00 3.85
444 445 3.965694 ACCTAGTACATTCTCGTCACCT 58.034 45.455 0.00 0.00 0.00 4.00
445 446 4.715527 AACCTAGTACATTCTCGTCACC 57.284 45.455 0.00 0.00 0.00 4.02
446 447 7.583230 CCTATAACCTAGTACATTCTCGTCAC 58.417 42.308 0.00 0.00 0.00 3.67
447 448 6.206243 GCCTATAACCTAGTACATTCTCGTCA 59.794 42.308 0.00 0.00 0.00 4.35
448 449 6.610456 GCCTATAACCTAGTACATTCTCGTC 58.390 44.000 0.00 0.00 0.00 4.20
449 450 5.180868 CGCCTATAACCTAGTACATTCTCGT 59.819 44.000 0.00 0.00 0.00 4.18
450 451 5.391736 CCGCCTATAACCTAGTACATTCTCG 60.392 48.000 0.00 0.00 0.00 4.04
451 452 5.621781 GCCGCCTATAACCTAGTACATTCTC 60.622 48.000 0.00 0.00 0.00 2.87
452 453 4.220163 GCCGCCTATAACCTAGTACATTCT 59.780 45.833 0.00 0.00 0.00 2.40
453 454 4.492611 GCCGCCTATAACCTAGTACATTC 58.507 47.826 0.00 0.00 0.00 2.67
454 455 3.057033 CGCCGCCTATAACCTAGTACATT 60.057 47.826 0.00 0.00 0.00 2.71
455 456 2.490903 CGCCGCCTATAACCTAGTACAT 59.509 50.000 0.00 0.00 0.00 2.29
456 457 1.881973 CGCCGCCTATAACCTAGTACA 59.118 52.381 0.00 0.00 0.00 2.90
457 458 1.200948 CCGCCGCCTATAACCTAGTAC 59.799 57.143 0.00 0.00 0.00 2.73
458 459 1.538047 CCGCCGCCTATAACCTAGTA 58.462 55.000 0.00 0.00 0.00 1.82
459 460 1.813728 GCCGCCGCCTATAACCTAGT 61.814 60.000 0.00 0.00 0.00 2.57
460 461 1.080025 GCCGCCGCCTATAACCTAG 60.080 63.158 0.00 0.00 0.00 3.02
461 462 1.530013 GAGCCGCCGCCTATAACCTA 61.530 60.000 0.00 0.00 34.57 3.08
462 463 2.842936 AGCCGCCGCCTATAACCT 60.843 61.111 0.00 0.00 34.57 3.50
463 464 2.357154 GAGCCGCCGCCTATAACC 60.357 66.667 0.00 0.00 34.57 2.85
464 465 1.373121 GAGAGCCGCCGCCTATAAC 60.373 63.158 0.00 0.00 34.57 1.89
465 466 1.524863 GAGAGAGCCGCCGCCTATAA 61.525 60.000 0.00 0.00 34.57 0.98
466 467 1.972223 GAGAGAGCCGCCGCCTATA 60.972 63.158 0.00 0.00 34.57 1.31
467 468 3.299190 GAGAGAGCCGCCGCCTAT 61.299 66.667 0.00 0.00 34.57 2.57
471 472 4.273257 GTAGGAGAGAGCCGCCGC 62.273 72.222 0.00 0.00 39.97 6.53
472 473 3.597728 GGTAGGAGAGAGCCGCCG 61.598 72.222 0.00 0.00 39.97 6.46
473 474 3.597728 CGGTAGGAGAGAGCCGCC 61.598 72.222 0.00 0.00 37.69 6.13
474 475 1.858372 GATCGGTAGGAGAGAGCCGC 61.858 65.000 0.00 0.00 43.45 6.53
475 476 0.250553 AGATCGGTAGGAGAGAGCCG 60.251 60.000 0.00 0.00 44.95 5.52
476 477 1.530323 GAGATCGGTAGGAGAGAGCC 58.470 60.000 0.00 0.00 0.00 4.70
477 478 1.073284 AGGAGATCGGTAGGAGAGAGC 59.927 57.143 0.00 0.00 0.00 4.09
478 479 3.502123 AAGGAGATCGGTAGGAGAGAG 57.498 52.381 0.00 0.00 0.00 3.20
479 480 3.435313 GGAAAGGAGATCGGTAGGAGAGA 60.435 52.174 0.00 0.00 0.00 3.10
480 481 2.888414 GGAAAGGAGATCGGTAGGAGAG 59.112 54.545 0.00 0.00 0.00 3.20
481 482 2.514582 AGGAAAGGAGATCGGTAGGAGA 59.485 50.000 0.00 0.00 0.00 3.71
482 483 2.888414 GAGGAAAGGAGATCGGTAGGAG 59.112 54.545 0.00 0.00 0.00 3.69
483 484 2.514582 AGAGGAAAGGAGATCGGTAGGA 59.485 50.000 0.00 0.00 0.00 2.94
484 485 2.952116 AGAGGAAAGGAGATCGGTAGG 58.048 52.381 0.00 0.00 0.00 3.18
485 486 3.319689 GGAAGAGGAAAGGAGATCGGTAG 59.680 52.174 0.00 0.00 0.00 3.18
486 487 3.052793 AGGAAGAGGAAAGGAGATCGGTA 60.053 47.826 0.00 0.00 0.00 4.02
487 488 2.112190 GGAAGAGGAAAGGAGATCGGT 58.888 52.381 0.00 0.00 0.00 4.69
488 489 2.364002 GAGGAAGAGGAAAGGAGATCGG 59.636 54.545 0.00 0.00 0.00 4.18
489 490 3.068024 CAGAGGAAGAGGAAAGGAGATCG 59.932 52.174 0.00 0.00 0.00 3.69
490 491 3.387699 CCAGAGGAAGAGGAAAGGAGATC 59.612 52.174 0.00 0.00 0.00 2.75
491 492 3.013417 TCCAGAGGAAGAGGAAAGGAGAT 59.987 47.826 0.00 0.00 0.00 2.75
492 493 2.383683 TCCAGAGGAAGAGGAAAGGAGA 59.616 50.000 0.00 0.00 0.00 3.71
493 494 2.826488 TCCAGAGGAAGAGGAAAGGAG 58.174 52.381 0.00 0.00 0.00 3.69
494 495 2.907042 GTTCCAGAGGAAGAGGAAAGGA 59.093 50.000 0.00 0.00 42.88 3.36
495 496 2.026729 GGTTCCAGAGGAAGAGGAAAGG 60.027 54.545 0.00 0.00 42.88 3.11
496 497 2.026729 GGGTTCCAGAGGAAGAGGAAAG 60.027 54.545 0.00 0.00 42.88 2.62
497 498 1.985895 GGGTTCCAGAGGAAGAGGAAA 59.014 52.381 0.00 0.00 42.88 3.13
498 499 1.657804 GGGTTCCAGAGGAAGAGGAA 58.342 55.000 0.00 0.00 42.88 3.36
499 500 0.614979 CGGGTTCCAGAGGAAGAGGA 60.615 60.000 0.00 0.00 42.88 3.71
500 501 0.614979 TCGGGTTCCAGAGGAAGAGG 60.615 60.000 0.00 0.00 42.88 3.69
501 502 0.820871 CTCGGGTTCCAGAGGAAGAG 59.179 60.000 10.38 0.00 42.88 2.85
502 503 0.408309 TCTCGGGTTCCAGAGGAAGA 59.592 55.000 16.38 0.00 42.88 2.87
503 504 1.267121 TTCTCGGGTTCCAGAGGAAG 58.733 55.000 16.38 0.00 42.88 3.46
504 505 1.952621 ATTCTCGGGTTCCAGAGGAA 58.047 50.000 16.38 10.87 39.66 3.36
505 506 1.952621 AATTCTCGGGTTCCAGAGGA 58.047 50.000 16.38 10.18 35.34 3.71
506 507 2.027192 TCAAATTCTCGGGTTCCAGAGG 60.027 50.000 16.38 3.42 35.34 3.69
507 508 3.003480 GTCAAATTCTCGGGTTCCAGAG 58.997 50.000 11.70 11.70 35.91 3.35
508 509 2.637872 AGTCAAATTCTCGGGTTCCAGA 59.362 45.455 0.00 0.00 0.00 3.86
509 510 2.744202 CAGTCAAATTCTCGGGTTCCAG 59.256 50.000 0.00 0.00 0.00 3.86
510 511 2.370519 TCAGTCAAATTCTCGGGTTCCA 59.629 45.455 0.00 0.00 0.00 3.53
511 512 3.003480 CTCAGTCAAATTCTCGGGTTCC 58.997 50.000 0.00 0.00 0.00 3.62
512 513 3.926616 TCTCAGTCAAATTCTCGGGTTC 58.073 45.455 0.00 0.00 0.00 3.62
513 514 4.559862 ATCTCAGTCAAATTCTCGGGTT 57.440 40.909 0.00 0.00 0.00 4.11
514 515 4.256920 CAATCTCAGTCAAATTCTCGGGT 58.743 43.478 0.00 0.00 0.00 5.28
515 516 4.256920 ACAATCTCAGTCAAATTCTCGGG 58.743 43.478 0.00 0.00 0.00 5.14
516 517 6.758416 TGATACAATCTCAGTCAAATTCTCGG 59.242 38.462 0.00 0.00 0.00 4.63
517 518 7.276438 TGTGATACAATCTCAGTCAAATTCTCG 59.724 37.037 0.00 0.00 0.00 4.04
518 519 8.484641 TGTGATACAATCTCAGTCAAATTCTC 57.515 34.615 0.00 0.00 0.00 2.87
519 520 8.316946 TCTGTGATACAATCTCAGTCAAATTCT 58.683 33.333 15.00 0.00 45.95 2.40
520 521 8.386606 GTCTGTGATACAATCTCAGTCAAATTC 58.613 37.037 15.00 0.00 45.95 2.17
521 522 8.099537 AGTCTGTGATACAATCTCAGTCAAATT 58.900 33.333 15.00 0.00 45.95 1.82
522 523 7.619050 AGTCTGTGATACAATCTCAGTCAAAT 58.381 34.615 15.00 0.00 45.95 2.32
523 524 6.997655 AGTCTGTGATACAATCTCAGTCAAA 58.002 36.000 15.00 0.00 45.95 2.69
524 525 6.596309 AGTCTGTGATACAATCTCAGTCAA 57.404 37.500 15.00 0.00 45.95 3.18
525 526 6.015095 ACAAGTCTGTGATACAATCTCAGTCA 60.015 38.462 15.00 0.00 45.95 3.41
526 527 6.393990 ACAAGTCTGTGATACAATCTCAGTC 58.606 40.000 15.00 11.27 45.95 3.51
527 528 6.352016 ACAAGTCTGTGATACAATCTCAGT 57.648 37.500 15.00 0.00 45.95 3.41
528 529 7.651304 GGATACAAGTCTGTGATACAATCTCAG 59.349 40.741 11.07 11.07 46.73 3.35
529 530 7.492524 GGATACAAGTCTGTGATACAATCTCA 58.507 38.462 0.00 0.00 36.96 3.27
530 531 7.938563 GGATACAAGTCTGTGATACAATCTC 57.061 40.000 0.00 0.00 36.96 2.75
546 547 8.267361 CCGCTAGGATTAATCACTGGATACAAG 61.267 44.444 17.07 5.80 44.55 3.16
547 548 6.518369 CCGCTAGGATTAATCACTGGATACAA 60.518 42.308 17.07 0.00 44.55 2.41
548 549 5.047306 CCGCTAGGATTAATCACTGGATACA 60.047 44.000 17.07 0.00 43.25 2.29
549 550 5.411781 CCGCTAGGATTAATCACTGGATAC 58.588 45.833 17.07 0.00 41.02 2.24
550 551 4.466370 CCCGCTAGGATTAATCACTGGATA 59.534 45.833 17.07 0.13 41.02 2.59
551 552 3.261897 CCCGCTAGGATTAATCACTGGAT 59.738 47.826 17.07 0.00 41.02 3.41
552 553 2.632996 CCCGCTAGGATTAATCACTGGA 59.367 50.000 17.07 0.00 41.02 3.86
553 554 2.632996 TCCCGCTAGGATTAATCACTGG 59.367 50.000 17.07 13.40 40.93 4.00
554 555 3.862642 GCTCCCGCTAGGATTAATCACTG 60.863 52.174 17.07 7.04 46.33 3.66
555 556 2.300437 GCTCCCGCTAGGATTAATCACT 59.700 50.000 17.07 13.16 46.33 3.41
556 557 2.037251 TGCTCCCGCTAGGATTAATCAC 59.963 50.000 17.07 6.78 46.33 3.06
557 558 2.325484 TGCTCCCGCTAGGATTAATCA 58.675 47.619 17.07 0.00 46.33 2.57
558 559 3.618690 ATGCTCCCGCTAGGATTAATC 57.381 47.619 6.93 6.93 46.33 1.75
559 560 4.286032 TGTTATGCTCCCGCTAGGATTAAT 59.714 41.667 0.00 0.00 46.33 1.40
560 561 3.644265 TGTTATGCTCCCGCTAGGATTAA 59.356 43.478 0.00 0.00 46.33 1.40
561 562 3.236047 TGTTATGCTCCCGCTAGGATTA 58.764 45.455 0.00 0.00 46.33 1.75
562 563 2.047061 TGTTATGCTCCCGCTAGGATT 58.953 47.619 0.00 0.00 46.33 3.01
563 564 1.717032 TGTTATGCTCCCGCTAGGAT 58.283 50.000 0.00 0.00 46.33 3.24
564 565 1.717032 ATGTTATGCTCCCGCTAGGA 58.283 50.000 0.00 0.00 44.91 2.94
565 566 2.550830 AATGTTATGCTCCCGCTAGG 57.449 50.000 0.00 0.00 36.97 3.02
566 567 6.560253 AATAAAATGTTATGCTCCCGCTAG 57.440 37.500 0.00 0.00 36.97 3.42
567 568 6.952773 AAATAAAATGTTATGCTCCCGCTA 57.047 33.333 0.00 0.00 36.97 4.26
568 569 5.852282 AAATAAAATGTTATGCTCCCGCT 57.148 34.783 0.00 0.00 36.97 5.52
569 570 5.810074 ACAAAATAAAATGTTATGCTCCCGC 59.190 36.000 0.00 0.00 30.04 6.13
570 571 8.188139 ACTACAAAATAAAATGTTATGCTCCCG 58.812 33.333 0.00 0.00 30.04 5.14
571 572 9.869757 AACTACAAAATAAAATGTTATGCTCCC 57.130 29.630 0.00 0.00 30.04 4.30
590 591 8.387354 CGCATATTGTCAGTGAATTAACTACAA 58.613 33.333 14.92 14.92 32.92 2.41
591 592 7.762159 TCGCATATTGTCAGTGAATTAACTACA 59.238 33.333 0.00 0.00 0.00 2.74
592 593 8.126871 TCGCATATTGTCAGTGAATTAACTAC 57.873 34.615 0.00 0.00 0.00 2.73
593 594 8.764287 CATCGCATATTGTCAGTGAATTAACTA 58.236 33.333 0.00 0.00 0.00 2.24
594 595 7.254898 CCATCGCATATTGTCAGTGAATTAACT 60.255 37.037 0.00 0.00 0.00 2.24
595 596 6.852853 CCATCGCATATTGTCAGTGAATTAAC 59.147 38.462 0.00 0.00 0.00 2.01
596 597 6.542005 ACCATCGCATATTGTCAGTGAATTAA 59.458 34.615 0.00 0.00 0.00 1.40
597 598 6.054941 ACCATCGCATATTGTCAGTGAATTA 58.945 36.000 0.00 0.00 0.00 1.40
598 599 4.883585 ACCATCGCATATTGTCAGTGAATT 59.116 37.500 0.00 0.00 0.00 2.17
599 600 4.454678 ACCATCGCATATTGTCAGTGAAT 58.545 39.130 0.00 0.00 0.00 2.57
600 601 3.872696 ACCATCGCATATTGTCAGTGAA 58.127 40.909 0.00 0.00 0.00 3.18
601 602 3.541996 ACCATCGCATATTGTCAGTGA 57.458 42.857 0.00 0.00 0.00 3.41
602 603 3.242837 CCAACCATCGCATATTGTCAGTG 60.243 47.826 0.00 0.00 0.00 3.66
603 604 2.945008 CCAACCATCGCATATTGTCAGT 59.055 45.455 0.00 0.00 0.00 3.41
604 605 2.945008 ACCAACCATCGCATATTGTCAG 59.055 45.455 0.00 0.00 0.00 3.51
605 606 2.997980 ACCAACCATCGCATATTGTCA 58.002 42.857 0.00 0.00 0.00 3.58
606 607 5.163854 GCTATACCAACCATCGCATATTGTC 60.164 44.000 0.00 0.00 0.00 3.18
607 608 4.695455 GCTATACCAACCATCGCATATTGT 59.305 41.667 0.00 0.00 0.00 2.71
608 609 4.094887 GGCTATACCAACCATCGCATATTG 59.905 45.833 0.00 0.00 38.86 1.90
609 610 4.261801 GGCTATACCAACCATCGCATATT 58.738 43.478 0.00 0.00 38.86 1.28
610 611 3.873910 GGCTATACCAACCATCGCATAT 58.126 45.455 0.00 0.00 38.86 1.78
611 612 3.328382 GGCTATACCAACCATCGCATA 57.672 47.619 0.00 0.00 38.86 3.14
612 613 2.185004 GGCTATACCAACCATCGCAT 57.815 50.000 0.00 0.00 38.86 4.73
613 614 3.698250 GGCTATACCAACCATCGCA 57.302 52.632 0.00 0.00 38.86 5.10
651 653 3.440228 GGCGTAGAAACTTTTTGTTGCA 58.560 40.909 0.00 0.00 39.13 4.08
665 667 0.036765 AATGAGCAAACCGGCGTAGA 60.037 50.000 6.01 0.00 39.27 2.59
682 684 9.418045 GTAAGCCACAAACATAAATGTGTAAAT 57.582 29.630 5.32 0.00 44.21 1.40
711 713 4.094887 CACATTCCCCATCTGAACGTTTAG 59.905 45.833 13.56 13.56 0.00 1.85
748 750 6.588373 GTGGAACAAACAGTAACAAACATTGT 59.412 34.615 0.00 0.00 44.44 2.71
775 777 2.047939 GCATGTGTTTGGCCAGGC 60.048 61.111 5.11 1.26 0.00 4.85
809 811 9.016438 TCTGTTAGACTGTTTTAACCTTTTTGT 57.984 29.630 11.26 0.00 0.00 2.83
886 890 3.727970 GCTTATGTTTCGTGCCTTGCTAC 60.728 47.826 0.00 0.00 0.00 3.58
917 921 3.057174 GGGGTTTATTGTTGTGCGATTGA 60.057 43.478 0.00 0.00 0.00 2.57
940 944 6.597672 CCTTGGCTTAGTTTTGGTTTTCTTTT 59.402 34.615 0.00 0.00 0.00 2.27
1118 1122 2.224159 AGGCCGGAGCAGGAGAAAA 61.224 57.895 5.05 0.00 42.56 2.29
1175 1179 0.533755 CTCTTTCCCAGGCCTATGCG 60.534 60.000 3.98 0.00 38.85 4.73
1510 1517 3.959975 CGCAAACACCCACACCCG 61.960 66.667 0.00 0.00 0.00 5.28
1742 1749 1.555075 GAAAGGCCCCAAAATTCCCTC 59.445 52.381 0.00 0.00 0.00 4.30
1782 1789 2.576615 GAAAGAGGCAGAACTGGTTGT 58.423 47.619 3.99 0.00 0.00 3.32
1796 1803 1.197264 AGAACGACGAGGACGAAAGAG 59.803 52.381 0.00 0.00 42.66 2.85
1806 1816 4.373348 AATTAAGGAGGAGAACGACGAG 57.627 45.455 0.00 0.00 0.00 4.18
1812 1822 7.929941 ATCAAGACAAATTAAGGAGGAGAAC 57.070 36.000 0.00 0.00 0.00 3.01
1983 1995 0.322816 TGGATTGGCAGTGCTCCTTC 60.323 55.000 19.41 10.25 0.00 3.46
1984 1996 0.112995 TTGGATTGGCAGTGCTCCTT 59.887 50.000 19.41 2.39 0.00 3.36
1985 1997 0.323178 CTTGGATTGGCAGTGCTCCT 60.323 55.000 19.41 3.88 0.00 3.69
2030 2042 1.447643 CCATCGGCTCCCAACCTAG 59.552 63.158 0.00 0.00 0.00 3.02
2155 2167 4.584518 TGCTGCTGGTGGTGGTGG 62.585 66.667 0.00 0.00 0.00 4.61
2156 2168 3.289834 GTGCTGCTGGTGGTGGTG 61.290 66.667 0.00 0.00 0.00 4.17
2157 2169 4.586235 GGTGCTGCTGGTGGTGGT 62.586 66.667 0.00 0.00 0.00 4.16
2158 2170 4.584518 TGGTGCTGCTGGTGGTGG 62.585 66.667 0.00 0.00 0.00 4.61
2159 2171 2.981909 CTGGTGCTGCTGGTGGTG 60.982 66.667 0.00 0.00 0.00 4.17
2160 2172 4.962836 GCTGGTGCTGCTGGTGGT 62.963 66.667 0.00 0.00 36.03 4.16
2413 2425 5.938125 TGAAAAATAGAGAGAGAAAACCCCG 59.062 40.000 0.00 0.00 0.00 5.73
2468 2481 0.239347 CGAGCAAGAAACCAAGCAGG 59.761 55.000 0.00 0.00 45.67 4.85
2475 2488 2.450609 TCACTACCGAGCAAGAAACC 57.549 50.000 0.00 0.00 0.00 3.27
2508 2521 2.704572 GTGCAATTCTCCAGCAGTACT 58.295 47.619 0.00 0.00 39.21 2.73
2588 2602 3.364964 GGAGTGAAATTAAGGCGTGTGTG 60.365 47.826 0.00 0.00 0.00 3.82
2652 2666 5.280499 TGAACCAGGGATAGATGAGAAGAA 58.720 41.667 0.00 0.00 0.00 2.52
2653 2667 4.883759 TGAACCAGGGATAGATGAGAAGA 58.116 43.478 0.00 0.00 0.00 2.87
2654 2668 4.653341 ACTGAACCAGGGATAGATGAGAAG 59.347 45.833 0.00 0.00 35.51 2.85
2891 2905 0.605589 AAGAAGAAGAAACCGGCCGG 60.606 55.000 42.17 42.17 42.03 6.13
3057 3097 4.769488 GGAGAGGATGACAGCTCATGTATA 59.231 45.833 0.00 0.00 44.17 1.47
3058 3098 3.577848 GGAGAGGATGACAGCTCATGTAT 59.422 47.826 0.00 0.00 44.17 2.29
3089 3129 8.824783 TCATAATTGGGGAAAAGAATTGAATGT 58.175 29.630 0.00 0.00 0.00 2.71
3164 3204 6.749923 AAGAAGTTTGCAGGAAGTGATATC 57.250 37.500 0.00 0.00 0.00 1.63
3379 3419 4.438744 GGGCGATTTCTTATTGTTGGAGTG 60.439 45.833 0.00 0.00 0.00 3.51
3405 3445 6.265422 AGCAAGGGTCTTATTAATTGTATGCC 59.735 38.462 0.00 0.00 0.00 4.40
3634 3678 2.896168 CAACCAATTCCACCATGCATC 58.104 47.619 0.00 0.00 0.00 3.91
4074 4118 1.617947 AAGAAGCTGGGTAGGGAGCG 61.618 60.000 0.00 0.00 40.34 5.03
4121 4175 9.819267 TCTATCTATGTAGATATCGTAGTGGTG 57.181 37.037 9.53 0.00 42.57 4.17
4187 4241 1.790623 CCATTACGGTATACACGCAGC 59.209 52.381 5.01 0.00 34.00 5.25
4197 4251 2.425312 CAAAGCAATGCCCATTACGGTA 59.575 45.455 0.00 0.00 0.00 4.02
4201 4257 3.333029 AACCAAAGCAATGCCCATTAC 57.667 42.857 0.00 0.00 0.00 1.89
4211 4267 3.117054 ACCCTAACCCTAAACCAAAGCAA 60.117 43.478 0.00 0.00 0.00 3.91
4240 4296 2.444624 CGACATCGACACAAGCCCG 61.445 63.158 0.00 0.00 43.02 6.13
4353 4409 1.379176 CGCCCCTCTCTCTCACTCA 60.379 63.158 0.00 0.00 0.00 3.41
4591 4655 2.890945 GGGTAAAAGAGAAAGCCTGCAA 59.109 45.455 0.00 0.00 0.00 4.08
4627 4693 3.066621 AGCGATGCAGTAGAGAGAGAAAG 59.933 47.826 0.00 0.00 0.00 2.62
4635 4701 0.179089 AGCCAAGCGATGCAGTAGAG 60.179 55.000 0.00 0.00 0.00 2.43
4837 4903 6.564709 TCAATGAATGAACAGTTCCTCAAG 57.435 37.500 15.60 12.32 34.30 3.02
5050 5117 2.095718 AGAAGAAGCGCCGAATTGTTTC 60.096 45.455 2.29 0.00 0.00 2.78
5106 5173 5.425539 ACATACTATGGCTTCTGTACTTGGT 59.574 40.000 1.11 0.00 33.60 3.67
5151 5221 8.082242 GCCTCTACAGTTGAATGTGTAAAAATT 58.918 33.333 0.00 0.00 34.56 1.82
5152 5222 7.573096 CGCCTCTACAGTTGAATGTGTAAAAAT 60.573 37.037 0.00 0.00 34.56 1.82
5177 5247 7.377928 CCAATTATTCGTACTTAGTGTACTCCG 59.622 40.741 0.00 0.00 46.89 4.63
5590 5664 6.374613 AGTGCTAAAATTAGGAAACTGGTAGC 59.625 38.462 2.61 0.00 43.88 3.58
5620 5694 2.227388 CACACCTTGCTGTCCAAAGATC 59.773 50.000 0.00 0.00 31.94 2.75
5621 5695 2.233271 CACACCTTGCTGTCCAAAGAT 58.767 47.619 0.00 0.00 31.94 2.40
5622 5696 1.679139 CACACCTTGCTGTCCAAAGA 58.321 50.000 0.00 0.00 31.94 2.52
5623 5697 0.670162 CCACACCTTGCTGTCCAAAG 59.330 55.000 0.00 0.00 31.94 2.77
5760 5834 2.283388 CCCTTGTGCACCAGCCAT 60.283 61.111 15.69 0.00 41.13 4.40
5808 5882 0.323725 GTGCCATTCCCAGTGTCCAT 60.324 55.000 0.00 0.00 0.00 3.41
5992 6075 0.098200 CATGCATGACACGCTGGAAG 59.902 55.000 22.59 0.00 0.00 3.46
6093 6180 0.965363 ATGGGCCGTGCAGTAAAAGG 60.965 55.000 0.00 0.00 0.00 3.11
6464 6556 2.764547 TGGTGGTGGTGACCGTCA 60.765 61.111 0.00 0.00 46.62 4.35
6470 6562 3.552384 GACGGGTGGTGGTGGTGA 61.552 66.667 0.00 0.00 0.00 4.02
6704 6803 4.119363 GGGAGCTGCATGAGGCCA 62.119 66.667 5.01 0.00 43.89 5.36
6899 7010 3.499737 CCGAAAATCGCCGCTGCT 61.500 61.111 0.00 0.00 38.82 4.24
7241 7381 1.210234 TGATCCATGTCGCACATCCTT 59.790 47.619 0.00 0.00 36.53 3.36
7412 7564 1.447314 CATGTCGCTGCTGCTCTGA 60.447 57.895 14.03 0.76 36.97 3.27
7433 7585 0.617535 TCATCTCGGCCTCCAAGGAA 60.618 55.000 0.00 0.00 37.67 3.36
7928 8084 9.467030 AGAGGAGGGGAATAAGAAAATAATACT 57.533 33.333 0.00 0.00 0.00 2.12
7956 8112 8.463607 GGGCATTTGTGCTAGTTATTTTACTAA 58.536 33.333 0.07 0.00 30.63 2.24
8037 8193 5.186996 ACGAAAACTGCATTGATGAAACT 57.813 34.783 0.00 0.00 0.00 2.66
8181 8409 1.840635 GCCACCTCACCTCCTTAGAAT 59.159 52.381 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.