Multiple sequence alignment - TraesCS2A01G402700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G402700 chr2A 100.000 4897 0 0 1 4897 656969263 656964367 0.000000e+00 9044.0
1 TraesCS2A01G402700 chr2D 86.269 2265 156 81 998 3165 513105577 513103371 0.000000e+00 2316.0
2 TraesCS2A01G402700 chr2D 85.543 920 63 39 3168 4060 513103400 513102524 0.000000e+00 898.0
3 TraesCS2A01G402700 chr2D 84.392 551 37 22 436 951 513106119 513105583 3.400000e-136 496.0
4 TraesCS2A01G402700 chr2D 84.922 451 35 17 4116 4553 513102512 513102082 4.530000e-115 425.0
5 TraesCS2A01G402700 chr2D 81.712 257 11 10 4598 4839 513102086 513101851 1.080000e-41 182.0
6 TraesCS2A01G402700 chr2D 94.203 69 4 0 1 69 513106589 513106521 6.700000e-19 106.0
7 TraesCS2A01G402700 chr2D 93.750 48 3 0 114 161 513106432 513106385 6.800000e-09 73.1
8 TraesCS2A01G402700 chr2D 95.122 41 2 0 4857 4897 12743637 12743597 1.140000e-06 65.8
9 TraesCS2A01G402700 chr2D 90.196 51 4 1 4847 4897 299547997 299547948 1.140000e-06 65.8
10 TraesCS2A01G402700 chr2D 100.000 33 0 0 67 99 513106500 513106468 1.470000e-05 62.1
11 TraesCS2A01G402700 chr2B 84.395 1429 100 54 1811 3165 603921373 603919994 0.000000e+00 1290.0
12 TraesCS2A01G402700 chr2B 85.023 1095 93 32 3168 4230 603920023 603918968 0.000000e+00 1048.0
13 TraesCS2A01G402700 chr2B 84.060 872 65 35 441 1280 603922830 603922001 0.000000e+00 773.0
14 TraesCS2A01G402700 chr2B 91.321 530 26 6 4344 4863 603915681 603915162 0.000000e+00 706.0
15 TraesCS2A01G402700 chr2B 83.300 497 44 23 1291 1779 603921958 603921493 5.860000e-114 422.0
16 TraesCS2A01G402700 chr2B 87.111 225 8 10 67 279 603923140 603922925 8.190000e-58 235.0
17 TraesCS2A01G402700 chr2B 91.525 59 5 0 320 378 603922922 603922864 1.130000e-11 82.4
18 TraesCS2A01G402700 chr2B 97.500 40 1 0 4858 4897 166407182 166407143 8.800000e-08 69.4
19 TraesCS2A01G402700 chr5A 97.619 42 1 0 4856 4897 339751793 339751752 6.800000e-09 73.1
20 TraesCS2A01G402700 chr3D 92.157 51 3 1 4848 4897 414762650 414762700 2.450000e-08 71.3
21 TraesCS2A01G402700 chr1D 93.333 45 3 0 4853 4897 3654375 3654331 3.160000e-07 67.6
22 TraesCS2A01G402700 chr1D 91.837 49 3 1 4849 4897 447257730 447257683 3.160000e-07 67.6
23 TraesCS2A01G402700 chr5D 95.122 41 2 0 4857 4897 52889611 52889651 1.140000e-06 65.8
24 TraesCS2A01G402700 chr5D 95.122 41 2 0 4857 4897 380846927 380846967 1.140000e-06 65.8
25 TraesCS2A01G402700 chr7D 85.000 60 7 2 1451 1509 575691527 575691469 5.290000e-05 60.2
26 TraesCS2A01G402700 chr7D 84.746 59 9 0 1451 1509 575742607 575742549 5.290000e-05 60.2
27 TraesCS2A01G402700 chr7A 85.000 60 7 2 1451 1509 666212633 666212575 5.290000e-05 60.2
28 TraesCS2A01G402700 chr7A 85.000 60 7 2 1451 1509 666506297 666506239 5.290000e-05 60.2
29 TraesCS2A01G402700 chr7B 83.051 59 10 0 1451 1509 637822833 637822775 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G402700 chr2A 656964367 656969263 4896 True 9044.000000 9044 100.000000 1 4897 1 chr2A.!!$R1 4896
1 TraesCS2A01G402700 chr2D 513101851 513106589 4738 True 569.775000 2316 88.848875 1 4839 8 chr2D.!!$R3 4838
2 TraesCS2A01G402700 chr2B 603915162 603923140 7978 True 650.914286 1290 86.676429 67 4863 7 chr2B.!!$R2 4796

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
430 562 0.038526 GTGTTCGGAGAGCGGAGAAA 60.039 55.0 0.00 0.00 42.00 2.52 F
431 563 0.243907 TGTTCGGAGAGCGGAGAAAG 59.756 55.0 0.00 0.00 42.00 2.62 F
719 873 0.323629 TTACACAGCCCCTGCAGTAC 59.676 55.0 13.81 1.03 41.13 2.73 F
1143 1330 0.398318 AGCACAGTGAGTTCCTTCCC 59.602 55.0 4.15 0.00 0.00 3.97 F
2500 2870 0.329596 AGCCAAGGAATCAGTGGGAC 59.670 55.0 4.01 0.00 32.71 4.46 F
3158 3580 0.184933 TGTAGGCCACCTTTGCACTT 59.815 50.0 5.01 0.00 34.61 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1525 1765 0.392998 GTGATCGATGGGTGCAGGTT 60.393 55.0 0.54 0.00 0.00 3.50 R
1528 1768 0.463204 AGAGTGATCGATGGGTGCAG 59.537 55.0 0.54 0.00 0.00 4.41 R
1529 1769 0.904649 AAGAGTGATCGATGGGTGCA 59.095 50.0 0.54 0.00 0.00 4.57 R
2844 3235 0.040058 AGGGACATTTGGCAGATGCA 59.960 50.0 17.11 0.00 44.36 3.96 R
3652 4108 0.034670 CTCCTTGGGCTTCTCCTTGG 60.035 60.0 0.00 0.00 34.39 3.61 R
4423 8080 0.039617 CTCTGGACGATGCTCGATCC 60.040 60.0 11.64 13.18 43.74 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
99 123 2.448582 GGACGGGGTATGGCATGGA 61.449 63.158 10.98 0.00 0.00 3.41
100 124 1.227853 GACGGGGTATGGCATGGAC 60.228 63.158 10.98 0.35 0.00 4.02
101 125 2.280797 CGGGGTATGGCATGGACG 60.281 66.667 10.98 5.80 0.00 4.79
104 128 2.113139 GGTATGGCATGGACGGGG 59.887 66.667 10.98 0.00 0.00 5.73
105 129 2.448582 GGTATGGCATGGACGGGGA 61.449 63.158 10.98 0.00 0.00 4.81
106 130 1.761174 GTATGGCATGGACGGGGAT 59.239 57.895 10.98 0.00 0.00 3.85
107 131 0.321653 GTATGGCATGGACGGGGATC 60.322 60.000 10.98 0.00 0.00 3.36
108 132 0.473694 TATGGCATGGACGGGGATCT 60.474 55.000 10.98 0.00 0.00 2.75
109 133 2.060567 ATGGCATGGACGGGGATCTG 62.061 60.000 0.00 0.00 0.00 2.90
204 269 0.383231 GTGAACTGTTGCTGCTGCTT 59.617 50.000 17.00 1.85 40.48 3.91
205 270 0.664761 TGAACTGTTGCTGCTGCTTC 59.335 50.000 17.00 11.55 40.48 3.86
206 271 0.950116 GAACTGTTGCTGCTGCTTCT 59.050 50.000 17.00 0.00 40.48 2.85
238 303 1.267334 CGTGTGTGTGAACGAACTTGG 60.267 52.381 0.00 0.00 42.32 3.61
282 414 2.096516 CGCTCTGAGAAGAAACAACTGC 60.097 50.000 9.28 0.00 0.00 4.40
283 415 2.096516 GCTCTGAGAAGAAACAACTGCG 60.097 50.000 9.28 0.00 0.00 5.18
284 416 2.478134 CTCTGAGAAGAAACAACTGCGG 59.522 50.000 0.00 0.00 0.00 5.69
285 417 2.158957 TCTGAGAAGAAACAACTGCGGT 60.159 45.455 0.00 0.00 0.00 5.68
286 418 2.614057 CTGAGAAGAAACAACTGCGGTT 59.386 45.455 4.68 4.68 35.86 4.44
287 419 3.013921 TGAGAAGAAACAACTGCGGTTT 58.986 40.909 8.58 1.53 40.91 3.27
288 420 3.442273 TGAGAAGAAACAACTGCGGTTTT 59.558 39.130 8.58 0.93 38.50 2.43
289 421 4.636648 TGAGAAGAAACAACTGCGGTTTTA 59.363 37.500 8.58 0.00 38.50 1.52
290 422 5.169836 AGAAGAAACAACTGCGGTTTTAG 57.830 39.130 8.58 0.00 38.50 1.85
291 423 3.349488 AGAAACAACTGCGGTTTTAGC 57.651 42.857 8.58 0.00 38.50 3.09
292 424 2.949644 AGAAACAACTGCGGTTTTAGCT 59.050 40.909 8.58 1.51 38.50 3.32
293 425 4.131596 AGAAACAACTGCGGTTTTAGCTA 58.868 39.130 8.58 0.00 38.50 3.32
294 426 4.577283 AGAAACAACTGCGGTTTTAGCTAA 59.423 37.500 8.58 0.86 38.50 3.09
295 427 4.483476 AACAACTGCGGTTTTAGCTAAG 57.517 40.909 8.58 0.00 32.73 2.18
296 428 3.473625 ACAACTGCGGTTTTAGCTAAGT 58.526 40.909 8.58 0.00 32.73 2.24
297 429 3.881089 ACAACTGCGGTTTTAGCTAAGTT 59.119 39.130 8.58 2.71 33.12 2.66
298 430 4.337274 ACAACTGCGGTTTTAGCTAAGTTT 59.663 37.500 8.58 0.00 31.34 2.66
299 431 4.483476 ACTGCGGTTTTAGCTAAGTTTG 57.517 40.909 6.24 0.37 35.28 2.93
300 432 3.881089 ACTGCGGTTTTAGCTAAGTTTGT 59.119 39.130 6.24 0.00 35.28 2.83
301 433 4.217754 TGCGGTTTTAGCTAAGTTTGTG 57.782 40.909 6.24 0.00 35.28 3.33
302 434 3.628487 TGCGGTTTTAGCTAAGTTTGTGT 59.372 39.130 6.24 0.00 35.28 3.72
303 435 4.815308 TGCGGTTTTAGCTAAGTTTGTGTA 59.185 37.500 6.24 0.00 35.28 2.90
304 436 5.296283 TGCGGTTTTAGCTAAGTTTGTGTAA 59.704 36.000 6.24 0.00 35.28 2.41
305 437 5.849604 GCGGTTTTAGCTAAGTTTGTGTAAG 59.150 40.000 6.24 0.00 0.00 2.34
306 438 6.293027 GCGGTTTTAGCTAAGTTTGTGTAAGA 60.293 38.462 6.24 0.00 0.00 2.10
307 439 7.632721 CGGTTTTAGCTAAGTTTGTGTAAGAA 58.367 34.615 6.24 0.00 0.00 2.52
308 440 8.287503 CGGTTTTAGCTAAGTTTGTGTAAGAAT 58.712 33.333 6.24 0.00 0.00 2.40
315 447 9.819267 AGCTAAGTTTGTGTAAGAATATACTCC 57.181 33.333 0.00 0.00 0.00 3.85
316 448 9.819267 GCTAAGTTTGTGTAAGAATATACTCCT 57.181 33.333 0.00 0.00 0.00 3.69
371 503 3.093057 TGAGTGACACATCTAGGAGCT 57.907 47.619 8.59 0.00 0.00 4.09
372 504 3.020274 TGAGTGACACATCTAGGAGCTC 58.980 50.000 4.71 4.71 0.00 4.09
373 505 3.287222 GAGTGACACATCTAGGAGCTCT 58.713 50.000 14.64 2.18 0.00 4.09
376 508 2.294074 GACACATCTAGGAGCTCTCGT 58.706 52.381 14.64 1.21 0.00 4.18
378 510 3.878103 GACACATCTAGGAGCTCTCGTTA 59.122 47.826 14.64 1.07 0.00 3.18
379 511 4.465886 ACACATCTAGGAGCTCTCGTTAT 58.534 43.478 14.64 0.00 0.00 1.89
380 512 4.890581 ACACATCTAGGAGCTCTCGTTATT 59.109 41.667 14.64 0.00 0.00 1.40
382 514 6.205853 ACACATCTAGGAGCTCTCGTTATTAG 59.794 42.308 14.64 5.05 0.00 1.73
384 516 7.388224 CACATCTAGGAGCTCTCGTTATTAGTA 59.612 40.741 14.64 0.00 0.00 1.82
389 521 7.209471 AGGAGCTCTCGTTATTAGTAGAATG 57.791 40.000 14.64 0.00 0.00 2.67
390 522 5.859648 GGAGCTCTCGTTATTAGTAGAATGC 59.140 44.000 14.64 0.00 0.00 3.56
392 524 6.806751 AGCTCTCGTTATTAGTAGAATGCAA 58.193 36.000 0.00 0.00 0.00 4.08
395 527 8.552034 GCTCTCGTTATTAGTAGAATGCAAAAT 58.448 33.333 0.00 0.00 0.00 1.82
424 556 0.600255 AACAAGGTGTTCGGAGAGCG 60.600 55.000 0.00 0.00 42.00 5.03
425 557 1.738099 CAAGGTGTTCGGAGAGCGG 60.738 63.158 0.00 0.00 42.00 5.52
426 558 1.906824 AAGGTGTTCGGAGAGCGGA 60.907 57.895 0.00 0.00 42.00 5.54
427 559 1.878656 AAGGTGTTCGGAGAGCGGAG 61.879 60.000 0.00 0.00 42.00 4.63
428 560 2.341101 GGTGTTCGGAGAGCGGAGA 61.341 63.158 0.00 0.00 42.00 3.71
429 561 1.585006 GTGTTCGGAGAGCGGAGAA 59.415 57.895 0.00 0.00 42.00 2.87
430 562 0.038526 GTGTTCGGAGAGCGGAGAAA 60.039 55.000 0.00 0.00 42.00 2.52
431 563 0.243907 TGTTCGGAGAGCGGAGAAAG 59.756 55.000 0.00 0.00 42.00 2.62
432 564 0.526662 GTTCGGAGAGCGGAGAAAGA 59.473 55.000 0.00 0.00 38.43 2.52
433 565 1.067776 GTTCGGAGAGCGGAGAAAGAA 60.068 52.381 0.00 0.00 38.43 2.52
434 566 1.254026 TCGGAGAGCGGAGAAAGAAA 58.746 50.000 0.00 0.00 0.00 2.52
435 567 1.202582 TCGGAGAGCGGAGAAAGAAAG 59.797 52.381 0.00 0.00 0.00 2.62
436 568 1.202582 CGGAGAGCGGAGAAAGAAAGA 59.797 52.381 0.00 0.00 0.00 2.52
437 569 2.733858 CGGAGAGCGGAGAAAGAAAGAG 60.734 54.545 0.00 0.00 0.00 2.85
438 570 2.494073 GGAGAGCGGAGAAAGAAAGAGA 59.506 50.000 0.00 0.00 0.00 3.10
441 573 5.257082 AGAGCGGAGAAAGAAAGAGATAC 57.743 43.478 0.00 0.00 0.00 2.24
457 589 7.623999 AAGAGATACAGAGAGAGAGAGAGAT 57.376 40.000 0.00 0.00 0.00 2.75
497 629 1.408683 GCAGTAGATCCACATTGGGCA 60.409 52.381 0.00 0.00 38.32 5.36
508 640 2.922704 ATTGGGCAGGGAGGTGGTG 61.923 63.158 0.00 0.00 0.00 4.17
524 657 5.148502 AGGTGGTGGTACTCTATAATGGAG 58.851 45.833 0.00 0.00 36.92 3.86
525 658 4.262506 GGTGGTGGTACTCTATAATGGAGC 60.263 50.000 0.00 0.00 34.46 4.70
526 659 4.344102 GTGGTGGTACTCTATAATGGAGCA 59.656 45.833 0.00 0.00 34.46 4.26
573 706 0.672401 CTTTGCAAAGCATGGCAGGG 60.672 55.000 25.26 0.00 41.68 4.45
575 708 4.807039 GCAAAGCATGGCAGGGCG 62.807 66.667 0.00 0.00 34.54 6.13
590 731 2.489275 GGCGCTCTCCCTCTCTCTG 61.489 68.421 7.64 0.00 0.00 3.35
603 747 4.141367 CCCTCTCTCTGTCTCTGGTATACA 60.141 50.000 5.01 0.00 0.00 2.29
672 817 2.623416 TGATAGGTATGACCAGTGCTCG 59.377 50.000 0.00 0.00 41.95 5.03
673 818 2.139323 TAGGTATGACCAGTGCTCGT 57.861 50.000 0.00 0.00 41.95 4.18
674 819 1.267121 AGGTATGACCAGTGCTCGTT 58.733 50.000 0.00 0.00 41.95 3.85
696 841 1.557099 ATCCTAGACAGACGCAACCA 58.443 50.000 0.00 0.00 0.00 3.67
704 858 4.827692 AGACAGACGCAACCATAATTACA 58.172 39.130 0.00 0.00 0.00 2.41
706 860 4.320023 ACAGACGCAACCATAATTACACA 58.680 39.130 0.00 0.00 0.00 3.72
709 863 2.422127 ACGCAACCATAATTACACAGCC 59.578 45.455 0.00 0.00 0.00 4.85
719 873 0.323629 TTACACAGCCCCTGCAGTAC 59.676 55.000 13.81 1.03 41.13 2.73
720 874 1.884075 TACACAGCCCCTGCAGTACG 61.884 60.000 13.81 0.00 41.13 3.67
730 888 2.815647 GCAGTACGCAGACAGGCC 60.816 66.667 0.00 0.00 41.79 5.19
731 889 2.656646 CAGTACGCAGACAGGCCA 59.343 61.111 5.01 0.00 0.00 5.36
732 890 1.219124 CAGTACGCAGACAGGCCAT 59.781 57.895 5.01 0.00 0.00 4.40
733 891 0.807667 CAGTACGCAGACAGGCCATC 60.808 60.000 5.01 1.26 0.00 3.51
734 892 0.972983 AGTACGCAGACAGGCCATCT 60.973 55.000 5.01 4.25 0.00 2.90
735 893 0.744874 GTACGCAGACAGGCCATCTA 59.255 55.000 5.01 0.00 0.00 1.98
736 894 1.032794 TACGCAGACAGGCCATCTAG 58.967 55.000 5.01 7.74 0.00 2.43
741 899 1.617850 CAGACAGGCCATCTAGCTAGG 59.382 57.143 20.58 7.03 0.00 3.02
847 1013 2.113139 AACCAAGCTCCCACCACG 59.887 61.111 0.00 0.00 0.00 4.94
848 1014 2.752807 AACCAAGCTCCCACCACGT 61.753 57.895 0.00 0.00 0.00 4.49
853 1019 2.047560 GCTCCCACCACGTACCAC 60.048 66.667 0.00 0.00 0.00 4.16
860 1026 3.448301 TCCCACCACGTACCACTATAAAG 59.552 47.826 0.00 0.00 0.00 1.85
861 1027 3.196254 CCCACCACGTACCACTATAAAGT 59.804 47.826 0.00 0.00 35.91 2.66
935 1101 2.752238 CGAGAGGGAGGCGACAGT 60.752 66.667 0.00 0.00 0.00 3.55
961 1148 1.075896 GGAGGAGGGACGGTGATCT 60.076 63.158 0.00 0.00 0.00 2.75
1013 1200 3.160047 AGAGATGGGGAGCAGCGG 61.160 66.667 0.00 0.00 0.00 5.52
1119 1306 2.280457 GCCATAGAGTGCCTCGGC 60.280 66.667 0.00 0.00 42.35 5.54
1125 1312 4.200283 GAGTGCCTCGGCGGAGAG 62.200 72.222 21.85 12.89 43.27 3.20
1143 1330 0.398318 AGCACAGTGAGTTCCTTCCC 59.602 55.000 4.15 0.00 0.00 3.97
1149 1336 2.027653 CAGTGAGTTCCTTCCCCTCTTC 60.028 54.545 0.00 0.00 0.00 2.87
1150 1337 2.158081 AGTGAGTTCCTTCCCCTCTTCT 60.158 50.000 0.00 0.00 0.00 2.85
1151 1338 2.640332 GTGAGTTCCTTCCCCTCTTCTT 59.360 50.000 0.00 0.00 0.00 2.52
1152 1339 2.907042 TGAGTTCCTTCCCCTCTTCTTC 59.093 50.000 0.00 0.00 0.00 2.87
1153 1340 3.178046 GAGTTCCTTCCCCTCTTCTTCT 58.822 50.000 0.00 0.00 0.00 2.85
1154 1341 3.178046 AGTTCCTTCCCCTCTTCTTCTC 58.822 50.000 0.00 0.00 0.00 2.87
1172 1359 5.245075 TCTTCTCCTTCTTCTTCTTCCTCAC 59.755 44.000 0.00 0.00 0.00 3.51
1184 1371 6.644347 TCTTCTTCCTCACACATATTCCTTC 58.356 40.000 0.00 0.00 0.00 3.46
1190 1377 5.016173 CCTCACACATATTCCTTCCCAAAA 58.984 41.667 0.00 0.00 0.00 2.44
1191 1378 5.126061 CCTCACACATATTCCTTCCCAAAAG 59.874 44.000 0.00 0.00 0.00 2.27
1194 1381 6.953520 TCACACATATTCCTTCCCAAAAGATT 59.046 34.615 0.00 0.00 0.00 2.40
1195 1382 7.454380 TCACACATATTCCTTCCCAAAAGATTT 59.546 33.333 0.00 0.00 0.00 2.17
1196 1383 7.546667 CACACATATTCCTTCCCAAAAGATTTG 59.453 37.037 0.00 0.00 0.00 2.32
1197 1384 6.536224 CACATATTCCTTCCCAAAAGATTTGC 59.464 38.462 0.00 0.00 0.00 3.68
1202 1398 3.324556 CCTTCCCAAAAGATTTGCCTTCA 59.675 43.478 0.00 0.00 0.00 3.02
1204 1400 5.513614 CCTTCCCAAAAGATTTGCCTTCATT 60.514 40.000 0.00 0.00 0.00 2.57
1207 1403 5.997129 TCCCAAAAGATTTGCCTTCATTTTC 59.003 36.000 0.00 0.00 0.00 2.29
1208 1404 5.181811 CCCAAAAGATTTGCCTTCATTTTCC 59.818 40.000 0.00 0.00 0.00 3.13
1211 1407 4.708726 AGATTTGCCTTCATTTTCCTCG 57.291 40.909 0.00 0.00 0.00 4.63
1218 1416 4.023193 TGCCTTCATTTTCCTCGTTCTTTC 60.023 41.667 0.00 0.00 0.00 2.62
1225 1423 3.936902 TTCCTCGTTCTTTCGTTTGTG 57.063 42.857 0.00 0.00 0.00 3.33
1226 1424 1.595794 TCCTCGTTCTTTCGTTTGTGC 59.404 47.619 0.00 0.00 0.00 4.57
1227 1425 1.597663 CCTCGTTCTTTCGTTTGTGCT 59.402 47.619 0.00 0.00 0.00 4.40
1236 1434 0.600782 TCGTTTGTGCTTCCCCGTAC 60.601 55.000 0.00 0.00 0.00 3.67
1240 1438 2.046604 GTGCTTCCCCGTACCCAC 60.047 66.667 0.00 0.00 0.00 4.61
1259 1458 3.482110 CCACTTTTTCTTCTCGTTTTGCG 59.518 43.478 0.00 0.00 43.01 4.85
1280 1479 0.592247 CGGTTGTCTGCTGTGTTTGC 60.592 55.000 0.00 0.00 0.00 3.68
1305 1536 8.068977 GCACATGAATGATGAATCTAGTTTCTC 58.931 37.037 13.38 9.38 35.80 2.87
1317 1548 1.800805 AGTTTCTCGCCATGTCTGTG 58.199 50.000 0.00 0.00 0.00 3.66
1363 1598 2.619074 GGTTCCTTGTAGCTGCCTGATT 60.619 50.000 0.00 0.00 0.00 2.57
1365 1600 0.737219 CCTTGTAGCTGCCTGATTGC 59.263 55.000 0.00 0.00 0.00 3.56
1398 1633 9.332502 GTCTCCTTTTAATCTCTTTAGAATCCC 57.667 37.037 0.00 0.00 34.73 3.85
1399 1634 8.204836 TCTCCTTTTAATCTCTTTAGAATCCCG 58.795 37.037 0.00 0.00 34.73 5.14
1436 1676 3.448660 GGGCCTTGTTAATTTCAGATGCT 59.551 43.478 0.84 0.00 0.00 3.79
1439 1679 5.450550 GGCCTTGTTAATTTCAGATGCTACC 60.451 44.000 0.00 0.00 0.00 3.18
1505 1745 1.474478 TCTCACGTCAAGAGCCATCTC 59.526 52.381 0.00 0.00 39.65 2.75
1525 1765 6.433847 TCTCCAGGTTATTTTCTTCAGTCA 57.566 37.500 0.00 0.00 0.00 3.41
1526 1766 6.837312 TCTCCAGGTTATTTTCTTCAGTCAA 58.163 36.000 0.00 0.00 0.00 3.18
1528 1768 5.768164 TCCAGGTTATTTTCTTCAGTCAACC 59.232 40.000 0.00 0.00 35.31 3.77
1529 1769 5.770162 CCAGGTTATTTTCTTCAGTCAACCT 59.230 40.000 0.00 0.00 43.81 3.50
1532 1772 5.009610 GGTTATTTTCTTCAGTCAACCTGCA 59.990 40.000 0.00 0.00 41.25 4.41
1533 1773 4.574599 ATTTTCTTCAGTCAACCTGCAC 57.425 40.909 0.00 0.00 41.25 4.57
1534 1774 1.967319 TTCTTCAGTCAACCTGCACC 58.033 50.000 0.00 0.00 41.25 5.01
1537 1777 0.478072 TTCAGTCAACCTGCACCCAT 59.522 50.000 0.00 0.00 41.25 4.00
1539 1779 1.003355 AGTCAACCTGCACCCATCG 60.003 57.895 0.00 0.00 0.00 3.84
1555 1795 3.242969 CCCATCGATCACTCTTGCAATTG 60.243 47.826 0.00 0.00 0.00 2.32
1557 1797 4.495349 CCATCGATCACTCTTGCAATTGTC 60.495 45.833 7.40 0.07 0.00 3.18
1564 1804 4.398988 TCACTCTTGCAATTGTCTTGTGTT 59.601 37.500 7.40 0.00 0.00 3.32
1567 1807 6.919662 CACTCTTGCAATTGTCTTGTGTTAAT 59.080 34.615 7.40 0.00 0.00 1.40
1568 1808 7.113965 CACTCTTGCAATTGTCTTGTGTTAATC 59.886 37.037 7.40 0.00 0.00 1.75
1569 1809 7.013655 ACTCTTGCAATTGTCTTGTGTTAATCT 59.986 33.333 7.40 0.00 0.00 2.40
1605 1846 4.276926 GGAGGAGCCTGCAAAATAATACAG 59.723 45.833 2.90 0.00 34.41 2.74
1606 1847 4.860022 AGGAGCCTGCAAAATAATACAGT 58.140 39.130 0.00 0.00 0.00 3.55
1608 1849 5.823045 AGGAGCCTGCAAAATAATACAGTAC 59.177 40.000 0.00 0.00 0.00 2.73
1611 1852 5.523916 AGCCTGCAAAATAATACAGTACGAG 59.476 40.000 0.00 0.00 0.00 4.18
1612 1853 5.293569 GCCTGCAAAATAATACAGTACGAGT 59.706 40.000 0.00 0.00 0.00 4.18
1633 1874 2.171870 TCTGACTTCTCCCCGTTTGTTT 59.828 45.455 0.00 0.00 0.00 2.83
1637 1878 2.949644 ACTTCTCCCCGTTTGTTTCTTG 59.050 45.455 0.00 0.00 0.00 3.02
1639 1880 3.842007 TCTCCCCGTTTGTTTCTTGTA 57.158 42.857 0.00 0.00 0.00 2.41
1640 1881 3.469739 TCTCCCCGTTTGTTTCTTGTAC 58.530 45.455 0.00 0.00 0.00 2.90
1694 1935 3.366396 AGGCGAAGAAAGGTGAGAGATA 58.634 45.455 0.00 0.00 0.00 1.98
1710 1951 5.587844 TGAGAGATAAAGCTCTGCCATTTTC 59.412 40.000 1.83 0.00 44.92 2.29
1733 1974 9.761504 TTTCATTTTCATGCATCTTTCTTTACA 57.238 25.926 0.00 0.00 0.00 2.41
1770 2013 9.077885 ACAAATCTTTCTTTACTTAATCAGCCA 57.922 29.630 0.00 0.00 0.00 4.75
1779 2022 3.891049 ACTTAATCAGCCATGGAAGTCC 58.109 45.455 18.40 0.00 0.00 3.85
1789 2101 4.478686 AGCCATGGAAGTCCTAGGTTTTAT 59.521 41.667 18.40 2.07 36.82 1.40
1793 2105 6.100424 CCATGGAAGTCCTAGGTTTTATCTCT 59.900 42.308 5.56 0.00 36.82 3.10
1795 2107 6.947464 TGGAAGTCCTAGGTTTTATCTCTTG 58.053 40.000 9.08 0.00 36.82 3.02
1796 2108 6.500751 TGGAAGTCCTAGGTTTTATCTCTTGT 59.499 38.462 9.08 0.00 36.82 3.16
1801 2136 5.425539 TCCTAGGTTTTATCTCTTGTCCCTG 59.574 44.000 9.08 0.00 0.00 4.45
1809 2144 9.832445 GTTTTATCTCTTGTCCCTGTATATTCA 57.168 33.333 0.00 0.00 0.00 2.57
1815 2150 8.642432 TCTCTTGTCCCTGTATATTCATGTTAG 58.358 37.037 0.00 0.00 0.00 2.34
1834 2169 3.851976 AGAAATTAGTCTGTCGACGCT 57.148 42.857 11.62 11.24 44.93 5.07
1858 2196 5.941948 TTTTAGCTTAGTTCCACTGCTTC 57.058 39.130 0.00 0.00 31.16 3.86
1870 2208 6.547510 AGTTCCACTGCTTCTTTACAATCTTT 59.452 34.615 0.00 0.00 0.00 2.52
1871 2209 7.719633 AGTTCCACTGCTTCTTTACAATCTTTA 59.280 33.333 0.00 0.00 0.00 1.85
1896 2234 3.131046 AGCAAAGTTCACCTCCAAAACAG 59.869 43.478 0.00 0.00 0.00 3.16
1899 2237 5.578776 CAAAGTTCACCTCCAAAACAGTAC 58.421 41.667 0.00 0.00 0.00 2.73
1904 2242 5.464030 TCACCTCCAAAACAGTACTAGTC 57.536 43.478 0.00 0.00 0.00 2.59
1914 2252 8.746530 CCAAAACAGTACTAGTCCTGTAGAATA 58.253 37.037 20.09 0.00 40.91 1.75
1924 2262 7.837689 ACTAGTCCTGTAGAATATTACACCACA 59.162 37.037 0.00 0.00 30.74 4.17
1925 2263 6.875076 AGTCCTGTAGAATATTACACCACAC 58.125 40.000 0.00 0.00 30.74 3.82
1927 2265 7.038587 AGTCCTGTAGAATATTACACCACACAA 60.039 37.037 0.00 0.00 30.74 3.33
1929 2267 8.325787 TCCTGTAGAATATTACACCACACAAAT 58.674 33.333 0.00 0.00 30.74 2.32
1930 2268 9.607988 CCTGTAGAATATTACACCACACAAATA 57.392 33.333 0.00 0.00 30.74 1.40
2017 2357 4.054780 GGCAACTCATTCGGTACTCATA 57.945 45.455 0.00 0.00 0.00 2.15
2019 2359 4.441634 GGCAACTCATTCGGTACTCATAGT 60.442 45.833 0.00 0.00 0.00 2.12
2020 2360 4.504461 GCAACTCATTCGGTACTCATAGTG 59.496 45.833 0.00 0.00 0.00 2.74
2021 2361 4.920640 ACTCATTCGGTACTCATAGTGG 57.079 45.455 0.00 0.00 0.00 4.00
2022 2362 3.068307 ACTCATTCGGTACTCATAGTGGC 59.932 47.826 0.00 0.00 0.00 5.01
2023 2363 3.028130 TCATTCGGTACTCATAGTGGCA 58.972 45.455 0.00 0.00 0.00 4.92
2024 2364 3.641436 TCATTCGGTACTCATAGTGGCAT 59.359 43.478 0.00 0.00 0.00 4.40
2078 2433 0.380733 CGCTTCATCATGCATGCAGT 59.619 50.000 26.69 11.72 28.98 4.40
2079 2434 1.840181 GCTTCATCATGCATGCAGTG 58.160 50.000 26.69 22.18 28.98 3.66
2109 2464 2.428888 GCTCCAAAAGCCAGAAACAG 57.571 50.000 0.00 0.00 45.92 3.16
2135 2492 7.816945 AAAAAGTTAATCCGCATGAGATTTG 57.183 32.000 14.39 0.00 35.59 2.32
2184 2545 3.644953 TGGAAAGCCAAACCCCTTT 57.355 47.368 0.00 0.00 42.49 3.11
2264 2625 0.619832 ATGAGCAGCAAGGAGGAGGA 60.620 55.000 0.00 0.00 0.00 3.71
2265 2626 1.263342 TGAGCAGCAAGGAGGAGGAG 61.263 60.000 0.00 0.00 0.00 3.69
2266 2627 1.970352 GAGCAGCAAGGAGGAGGAGG 61.970 65.000 0.00 0.00 0.00 4.30
2268 2629 2.690510 AGCAAGGAGGAGGAGGCC 60.691 66.667 0.00 0.00 0.00 5.19
2269 2630 3.803162 GCAAGGAGGAGGAGGCCC 61.803 72.222 0.00 0.00 0.00 5.80
2270 2631 3.093172 CAAGGAGGAGGAGGCCCC 61.093 72.222 0.00 0.00 0.00 5.80
2271 2632 3.626596 AAGGAGGAGGAGGCCCCA 61.627 66.667 12.24 0.00 37.41 4.96
2272 2633 3.208342 AAGGAGGAGGAGGCCCCAA 62.208 63.158 12.24 0.00 37.41 4.12
2273 2634 2.368878 GGAGGAGGAGGCCCCAAT 60.369 66.667 12.24 0.00 37.41 3.16
2274 2635 2.761465 GGAGGAGGAGGCCCCAATG 61.761 68.421 12.24 0.00 37.41 2.82
2275 2636 3.424105 AGGAGGAGGCCCCAATGC 61.424 66.667 12.24 0.00 37.41 3.56
2369 2731 5.276207 GCGTTCAAGTTAAAAAGACAAAGCC 60.276 40.000 0.00 0.00 0.00 4.35
2399 2761 2.863137 GCCTAATCTTGACAAGAGAGCG 59.137 50.000 21.78 15.01 41.61 5.03
2424 2787 4.746535 TTTCCTTGGGGTCTTTGAAAAC 57.253 40.909 0.00 0.00 0.00 2.43
2425 2789 2.303175 TCCTTGGGGTCTTTGAAAACG 58.697 47.619 0.00 0.00 0.00 3.60
2500 2870 0.329596 AGCCAAGGAATCAGTGGGAC 59.670 55.000 4.01 0.00 32.71 4.46
2548 2918 6.363626 CGGTACTGCATTGATGATTACTACTC 59.636 42.308 0.00 0.00 0.00 2.59
2620 2996 2.750637 GGATGCTGCTGCTGCTGT 60.751 61.111 27.67 18.20 39.81 4.40
2682 3061 1.591619 GCGACTTTAAGGTACGCATCC 59.408 52.381 20.88 0.00 46.75 3.51
2775 3166 8.686334 TGAATTATTTGCTTTCATCTCCCTTAC 58.314 33.333 0.00 0.00 0.00 2.34
2786 3177 7.676683 TTCATCTCCCTTACTATTACTTGCT 57.323 36.000 0.00 0.00 0.00 3.91
2800 3191 5.574891 TTACTTGCTCACACACAAATTGT 57.425 34.783 0.00 0.00 39.97 2.71
2841 3232 1.323412 CTGAGCTCCTACGTAGCCAT 58.677 55.000 17.41 2.43 41.02 4.40
2842 3233 1.683917 CTGAGCTCCTACGTAGCCATT 59.316 52.381 17.41 2.51 41.02 3.16
2844 3235 2.500098 TGAGCTCCTACGTAGCCATTTT 59.500 45.455 17.41 0.00 41.02 1.82
2847 3238 2.627945 CTCCTACGTAGCCATTTTGCA 58.372 47.619 17.41 0.00 0.00 4.08
2848 3239 3.206150 CTCCTACGTAGCCATTTTGCAT 58.794 45.455 17.41 0.00 0.00 3.96
2851 3242 3.002656 CCTACGTAGCCATTTTGCATCTG 59.997 47.826 17.41 0.00 0.00 2.90
2853 3244 1.534595 CGTAGCCATTTTGCATCTGCC 60.535 52.381 0.00 0.00 41.18 4.85
2854 3245 1.477700 GTAGCCATTTTGCATCTGCCA 59.522 47.619 0.00 0.00 41.18 4.92
2855 3246 0.978151 AGCCATTTTGCATCTGCCAA 59.022 45.000 0.00 0.00 41.18 4.52
2875 3267 3.287867 AATGTCCCTAGCATTGGTCAG 57.712 47.619 0.00 0.00 35.49 3.51
2921 3314 0.526739 CGCATGGTGCAATGTCATGG 60.527 55.000 16.80 7.90 45.36 3.66
2970 3368 2.095567 GCTGCATCTTGTGGTAGTTGTG 60.096 50.000 0.00 0.00 0.00 3.33
3055 3456 7.027760 ACTGTTGTATATCACTGTAGACGTTG 58.972 38.462 0.00 0.00 0.00 4.10
3117 3539 3.462021 CCAGATAGCTAGGCTTGTGAAC 58.538 50.000 0.00 0.00 40.44 3.18
3142 3564 6.369340 CACCGTATTTGTACAAGGACAATGTA 59.631 38.462 16.26 0.00 39.04 2.29
3143 3565 6.592607 ACCGTATTTGTACAAGGACAATGTAG 59.407 38.462 16.26 3.19 39.04 2.74
3144 3566 6.036735 CCGTATTTGTACAAGGACAATGTAGG 59.963 42.308 8.56 3.40 39.04 3.18
3145 3567 5.897377 ATTTGTACAAGGACAATGTAGGC 57.103 39.130 8.56 0.00 39.04 3.93
3146 3568 3.343941 TGTACAAGGACAATGTAGGCC 57.656 47.619 0.00 0.00 34.14 5.19
3147 3569 2.640332 TGTACAAGGACAATGTAGGCCA 59.360 45.455 5.01 0.00 34.14 5.36
3148 3570 2.200373 ACAAGGACAATGTAGGCCAC 57.800 50.000 5.01 1.31 0.00 5.01
3149 3571 1.271926 ACAAGGACAATGTAGGCCACC 60.272 52.381 5.01 0.00 0.00 4.61
3150 3572 1.004745 CAAGGACAATGTAGGCCACCT 59.995 52.381 5.01 0.00 37.71 4.00
3151 3573 1.372501 AGGACAATGTAGGCCACCTT 58.627 50.000 5.01 0.00 34.61 3.50
3152 3574 1.710809 AGGACAATGTAGGCCACCTTT 59.289 47.619 5.01 0.00 34.61 3.11
3153 3575 1.818674 GGACAATGTAGGCCACCTTTG 59.181 52.381 5.01 11.70 34.61 2.77
3154 3576 1.202348 GACAATGTAGGCCACCTTTGC 59.798 52.381 5.01 2.88 34.61 3.68
3155 3577 1.255882 CAATGTAGGCCACCTTTGCA 58.744 50.000 5.01 0.00 34.61 4.08
3156 3578 1.067635 CAATGTAGGCCACCTTTGCAC 60.068 52.381 5.01 0.00 34.61 4.57
3157 3579 0.405585 ATGTAGGCCACCTTTGCACT 59.594 50.000 5.01 0.00 34.61 4.40
3158 3580 0.184933 TGTAGGCCACCTTTGCACTT 59.815 50.000 5.01 0.00 34.61 3.16
3159 3581 0.598065 GTAGGCCACCTTTGCACTTG 59.402 55.000 5.01 0.00 34.61 3.16
3160 3582 1.178534 TAGGCCACCTTTGCACTTGC 61.179 55.000 5.01 0.00 36.96 4.01
3161 3583 3.823357 TAGGCCACCTTTGCACTTGCA 62.823 52.381 5.01 0.00 41.50 4.08
3173 3595 3.736530 GCACTTGCAGTAGAGACAATG 57.263 47.619 0.00 0.00 41.59 2.82
3174 3596 3.070018 GCACTTGCAGTAGAGACAATGT 58.930 45.455 0.00 0.00 41.59 2.71
3180 3602 2.799917 GCAGTAGAGACAATGTAGCCCG 60.800 54.545 0.00 0.00 0.00 6.13
3240 3662 1.484240 ACTCCTGAATCCTAGCACAGC 59.516 52.381 0.00 0.00 0.00 4.40
3262 3687 0.537653 TACCCGTCGGCATTCATGAA 59.462 50.000 11.26 11.26 0.00 2.57
3266 3691 1.942657 CCGTCGGCATTCATGAAGATT 59.057 47.619 14.54 0.00 0.00 2.40
3274 3699 5.625251 GGCATTCATGAAGATTATAGTGCG 58.375 41.667 14.54 0.00 0.00 5.34
3286 3711 6.618811 AGATTATAGTGCGGGTAGAATTACG 58.381 40.000 0.00 0.00 0.00 3.18
3287 3712 5.772825 TTATAGTGCGGGTAGAATTACGT 57.227 39.130 0.00 0.00 0.00 3.57
3288 3713 6.875948 TTATAGTGCGGGTAGAATTACGTA 57.124 37.500 0.00 0.00 0.00 3.57
3349 3776 3.398954 TTTCAGAAAACTGCACGTCAC 57.601 42.857 0.00 0.00 0.00 3.67
3359 3786 1.989165 CTGCACGTCACTTAGCTTCTC 59.011 52.381 0.00 0.00 0.00 2.87
3360 3787 1.613925 TGCACGTCACTTAGCTTCTCT 59.386 47.619 0.00 0.00 0.00 3.10
3372 3799 7.600375 TCACTTAGCTTCTCTGAAACACATAAG 59.400 37.037 0.00 0.00 0.00 1.73
3373 3800 6.876257 ACTTAGCTTCTCTGAAACACATAAGG 59.124 38.462 0.00 0.00 0.00 2.69
3374 3801 4.006319 AGCTTCTCTGAAACACATAAGGC 58.994 43.478 0.00 0.00 0.00 4.35
3375 3802 3.127721 GCTTCTCTGAAACACATAAGGCC 59.872 47.826 0.00 0.00 0.00 5.19
3376 3803 4.326826 CTTCTCTGAAACACATAAGGCCA 58.673 43.478 5.01 0.00 0.00 5.36
3377 3804 3.674997 TCTCTGAAACACATAAGGCCAC 58.325 45.455 5.01 0.00 0.00 5.01
3378 3805 3.072330 TCTCTGAAACACATAAGGCCACA 59.928 43.478 5.01 0.00 0.00 4.17
3379 3806 3.146066 TCTGAAACACATAAGGCCACAC 58.854 45.455 5.01 0.00 0.00 3.82
3381 3808 3.495331 TGAAACACATAAGGCCACACAT 58.505 40.909 5.01 0.00 0.00 3.21
3382 3809 4.657013 TGAAACACATAAGGCCACACATA 58.343 39.130 5.01 0.00 0.00 2.29
3384 3811 5.536538 TGAAACACATAAGGCCACACATAAA 59.463 36.000 5.01 0.00 0.00 1.40
3385 3812 6.210385 TGAAACACATAAGGCCACACATAAAT 59.790 34.615 5.01 0.00 0.00 1.40
3448 3895 7.125792 AGGAAATTAGATATCGTCCAACAGT 57.874 36.000 12.11 0.00 0.00 3.55
3457 3904 3.469008 TCGTCCAACAGTGTCAAATCT 57.531 42.857 0.00 0.00 0.00 2.40
3458 3905 3.130633 TCGTCCAACAGTGTCAAATCTG 58.869 45.455 0.00 0.00 37.65 2.90
3464 3911 4.232221 CAACAGTGTCAAATCTGAATGGC 58.768 43.478 0.00 0.00 35.84 4.40
3528 3977 6.095580 CACACAGCAGGACTACTTATCTCTAA 59.904 42.308 0.00 0.00 0.00 2.10
3564 4017 3.631686 TCAATGGATGCAGGAATTTACCG 59.368 43.478 0.00 0.00 34.73 4.02
3605 4058 7.329962 TGCATTTGTTTTCAGCAGATAATCAAG 59.670 33.333 0.00 0.00 0.00 3.02
3635 4091 1.899814 CACTACTACCCTGGTCTTGCA 59.100 52.381 0.00 0.00 0.00 4.08
3651 4107 1.597742 TGCAGTGAAGAAGCAAGACC 58.402 50.000 0.00 0.00 34.97 3.85
3652 4108 0.877743 GCAGTGAAGAAGCAAGACCC 59.122 55.000 0.00 0.00 0.00 4.46
3653 4109 1.528129 CAGTGAAGAAGCAAGACCCC 58.472 55.000 0.00 0.00 0.00 4.95
3654 4110 1.140312 AGTGAAGAAGCAAGACCCCA 58.860 50.000 0.00 0.00 0.00 4.96
3655 4111 1.494721 AGTGAAGAAGCAAGACCCCAA 59.505 47.619 0.00 0.00 0.00 4.12
3656 4112 1.882623 GTGAAGAAGCAAGACCCCAAG 59.117 52.381 0.00 0.00 0.00 3.61
3657 4113 1.202927 TGAAGAAGCAAGACCCCAAGG 60.203 52.381 0.00 0.00 40.04 3.61
3658 4114 1.073923 GAAGAAGCAAGACCCCAAGGA 59.926 52.381 0.00 0.00 36.73 3.36
3659 4115 0.695347 AGAAGCAAGACCCCAAGGAG 59.305 55.000 0.00 0.00 36.73 3.69
3660 4116 0.693049 GAAGCAAGACCCCAAGGAGA 59.307 55.000 0.00 0.00 36.73 3.71
3661 4117 1.073923 GAAGCAAGACCCCAAGGAGAA 59.926 52.381 0.00 0.00 36.73 2.87
3662 4118 0.695347 AGCAAGACCCCAAGGAGAAG 59.305 55.000 0.00 0.00 36.73 2.85
3785 4244 0.465824 AAGGCAGCTGCATCATCTCC 60.466 55.000 37.63 18.99 44.36 3.71
3854 4313 2.185350 CACTCCGGCTGCTTCGAT 59.815 61.111 0.00 0.00 0.00 3.59
3894 4353 1.336632 GCTCTCCCTGTCCATCTGCT 61.337 60.000 0.00 0.00 0.00 4.24
3932 4394 4.430118 GCGTGAAATTTTGTACATCGATCG 59.570 41.667 9.36 9.36 0.00 3.69
3933 4395 5.722863 GCGTGAAATTTTGTACATCGATCGA 60.723 40.000 21.86 21.86 0.00 3.59
3934 4396 6.410845 CGTGAAATTTTGTACATCGATCGAT 58.589 36.000 24.60 24.60 34.81 3.59
3935 4397 6.566427 CGTGAAATTTTGTACATCGATCGATC 59.434 38.462 27.20 16.77 31.62 3.69
3959 4422 2.167693 TCTGTCTGTCACTCGTTTGGTT 59.832 45.455 0.00 0.00 0.00 3.67
3981 4444 3.008375 TCATGGTGCTAGGATGATTAGCC 59.992 47.826 0.00 0.00 42.20 3.93
4057 4529 4.218417 CAGGTTACCAAGTTGCAAAGCTAT 59.782 41.667 15.48 0.00 0.00 2.97
4078 4550 2.665603 GCTCCCCGCTTTCAGAGT 59.334 61.111 0.00 0.00 35.14 3.24
4167 4639 1.174712 TTCTTGCTTGGCCTCTGCAC 61.175 55.000 15.34 0.00 40.13 4.57
4169 4641 4.666253 TGCTTGGCCTCTGCACCC 62.666 66.667 3.32 0.00 40.13 4.61
4196 4668 1.428448 TGCCTGAAACTGTTCGATCG 58.572 50.000 9.36 9.36 36.46 3.69
4197 4669 1.270094 TGCCTGAAACTGTTCGATCGT 60.270 47.619 15.94 0.00 36.46 3.73
4211 4683 2.112522 CGATCGTGTCACATGTAGCTC 58.887 52.381 7.03 0.00 0.00 4.09
4230 4702 2.198980 CCGGAGTAGGGAGGGAGG 59.801 72.222 0.00 0.00 0.00 4.30
4237 4728 0.178918 GTAGGGAGGGAGGGGAGATG 60.179 65.000 0.00 0.00 0.00 2.90
4238 4729 2.037304 TAGGGAGGGAGGGGAGATGC 62.037 65.000 0.00 0.00 0.00 3.91
4278 7924 3.798794 AAAAAGGGGGTGCAAAAGC 57.201 47.368 0.00 0.00 0.00 3.51
4285 7931 2.721231 GGTGCAAAAGCGTGCTGA 59.279 55.556 10.70 0.00 45.17 4.26
4286 7932 1.286880 GGTGCAAAAGCGTGCTGAT 59.713 52.632 10.70 0.00 45.17 2.90
4287 7933 1.005294 GGTGCAAAAGCGTGCTGATG 61.005 55.000 10.70 0.00 45.17 3.07
4288 7934 1.372004 TGCAAAAGCGTGCTGATGC 60.372 52.632 19.43 19.43 45.17 3.91
4289 7935 2.090524 GCAAAAGCGTGCTGATGCC 61.091 57.895 16.83 4.30 41.51 4.40
4290 7936 1.286570 CAAAAGCGTGCTGATGCCA 59.713 52.632 0.00 0.00 38.71 4.92
4342 7999 2.513204 CATGACGGCTCCTGCAGG 60.513 66.667 27.87 27.87 41.91 4.85
4343 8000 4.479993 ATGACGGCTCCTGCAGGC 62.480 66.667 28.91 17.10 42.86 4.85
4375 8032 3.335579 ACGAGAATACCCTGAACAAAGC 58.664 45.455 0.00 0.00 0.00 3.51
4423 8080 1.293924 CCACTGCATTTCTCGCTAGG 58.706 55.000 0.00 0.00 0.00 3.02
4432 8089 3.751342 CTCGCTAGGGATCGAGCA 58.249 61.111 10.28 0.00 44.30 4.26
4433 8090 2.262183 CTCGCTAGGGATCGAGCAT 58.738 57.895 10.28 0.00 44.30 3.79
4465 8122 6.291377 AGAATATATGTAGGTGGTGTGCTTG 58.709 40.000 0.00 0.00 0.00 4.01
4532 8193 3.506096 CCGCATGCAGCACAGAGG 61.506 66.667 19.57 3.89 46.13 3.69
4536 8197 1.674651 CATGCAGCACAGAGGCAGT 60.675 57.895 0.00 0.00 41.40 4.40
4586 8247 2.738314 GCAAGAAAATGCCATGTTCACC 59.262 45.455 10.17 0.00 40.49 4.02
4672 8333 0.747255 ACTCCTGCTGCCGTATACAG 59.253 55.000 3.32 0.00 38.22 2.74
4678 8339 1.067060 TGCTGCCGTATACAGTGCTAG 59.933 52.381 3.32 4.52 37.47 3.42
4726 8387 1.081892 CAGGTGCAGGAATGACGAAG 58.918 55.000 0.00 0.00 0.00 3.79
4727 8388 0.976641 AGGTGCAGGAATGACGAAGA 59.023 50.000 0.00 0.00 0.00 2.87
4728 8389 1.079503 GGTGCAGGAATGACGAAGAC 58.920 55.000 0.00 0.00 0.00 3.01
4729 8390 0.716108 GTGCAGGAATGACGAAGACG 59.284 55.000 0.00 0.00 45.75 4.18
4730 8391 0.601057 TGCAGGAATGACGAAGACGA 59.399 50.000 0.00 0.00 42.66 4.20
4731 8392 1.000394 TGCAGGAATGACGAAGACGAA 60.000 47.619 0.00 0.00 42.66 3.85
4740 8401 2.722629 TGACGAAGACGAACACGATTTC 59.277 45.455 0.00 0.00 42.66 2.17
4757 8418 4.378459 CGATTTCACCAGGCTTCACTTAAC 60.378 45.833 0.00 0.00 0.00 2.01
4760 8421 1.880027 CACCAGGCTTCACTTAACACC 59.120 52.381 0.00 0.00 0.00 4.16
4761 8422 1.493022 ACCAGGCTTCACTTAACACCA 59.507 47.619 0.00 0.00 0.00 4.17
4780 8448 1.682854 CAGCTCACTTGCCCTGAAAAA 59.317 47.619 0.00 0.00 0.00 1.94
4843 8519 8.567285 ACAGTACCATGATTAAAGAAAGGAAG 57.433 34.615 0.00 0.00 0.00 3.46
4858 8534 7.971183 AGAAAGGAAGAGTCAAAAGATGTAC 57.029 36.000 0.00 0.00 0.00 2.90
4859 8535 7.740805 AGAAAGGAAGAGTCAAAAGATGTACT 58.259 34.615 0.00 0.00 0.00 2.73
4860 8536 8.871125 AGAAAGGAAGAGTCAAAAGATGTACTA 58.129 33.333 0.00 0.00 0.00 1.82
4862 8538 6.937392 AGGAAGAGTCAAAAGATGTACTACC 58.063 40.000 0.00 0.00 0.00 3.18
4863 8539 6.726764 AGGAAGAGTCAAAAGATGTACTACCT 59.273 38.462 0.00 0.00 0.00 3.08
4864 8540 7.036829 GGAAGAGTCAAAAGATGTACTACCTC 58.963 42.308 0.00 0.00 0.00 3.85
4865 8541 6.532988 AGAGTCAAAAGATGTACTACCTCC 57.467 41.667 0.00 0.00 0.00 4.30
4866 8542 5.125739 AGAGTCAAAAGATGTACTACCTCCG 59.874 44.000 0.00 0.00 0.00 4.63
4867 8543 4.771054 AGTCAAAAGATGTACTACCTCCGT 59.229 41.667 0.00 0.00 0.00 4.69
4868 8544 5.100943 GTCAAAAGATGTACTACCTCCGTC 58.899 45.833 0.00 0.00 0.00 4.79
4869 8545 5.014858 TCAAAAGATGTACTACCTCCGTCT 58.985 41.667 0.00 0.00 0.00 4.18
4870 8546 5.125097 TCAAAAGATGTACTACCTCCGTCTC 59.875 44.000 0.00 0.00 0.00 3.36
4871 8547 3.928005 AGATGTACTACCTCCGTCTCA 57.072 47.619 0.00 0.00 0.00 3.27
4872 8548 4.232188 AGATGTACTACCTCCGTCTCAA 57.768 45.455 0.00 0.00 0.00 3.02
4873 8549 4.597004 AGATGTACTACCTCCGTCTCAAA 58.403 43.478 0.00 0.00 0.00 2.69
4874 8550 5.014858 AGATGTACTACCTCCGTCTCAAAA 58.985 41.667 0.00 0.00 0.00 2.44
4875 8551 5.657302 AGATGTACTACCTCCGTCTCAAAAT 59.343 40.000 0.00 0.00 0.00 1.82
4876 8552 6.832384 AGATGTACTACCTCCGTCTCAAAATA 59.168 38.462 0.00 0.00 0.00 1.40
4877 8553 6.839124 TGTACTACCTCCGTCTCAAAATAA 57.161 37.500 0.00 0.00 0.00 1.40
4878 8554 7.230849 TGTACTACCTCCGTCTCAAAATAAA 57.769 36.000 0.00 0.00 0.00 1.40
4879 8555 7.844009 TGTACTACCTCCGTCTCAAAATAAAT 58.156 34.615 0.00 0.00 0.00 1.40
4880 8556 7.762615 TGTACTACCTCCGTCTCAAAATAAATG 59.237 37.037 0.00 0.00 0.00 2.32
4881 8557 6.942976 ACTACCTCCGTCTCAAAATAAATGA 58.057 36.000 0.00 0.00 0.00 2.57
4882 8558 6.817140 ACTACCTCCGTCTCAAAATAAATGAC 59.183 38.462 0.00 0.00 0.00 3.06
4883 8559 5.805728 ACCTCCGTCTCAAAATAAATGACT 58.194 37.500 0.00 0.00 0.00 3.41
4884 8560 5.875359 ACCTCCGTCTCAAAATAAATGACTC 59.125 40.000 0.00 0.00 0.00 3.36
4885 8561 5.874810 CCTCCGTCTCAAAATAAATGACTCA 59.125 40.000 0.00 0.00 0.00 3.41
4886 8562 6.371548 CCTCCGTCTCAAAATAAATGACTCAA 59.628 38.462 0.00 0.00 0.00 3.02
4887 8563 7.129109 TCCGTCTCAAAATAAATGACTCAAC 57.871 36.000 0.00 0.00 0.00 3.18
4888 8564 6.934645 TCCGTCTCAAAATAAATGACTCAACT 59.065 34.615 0.00 0.00 0.00 3.16
4889 8565 7.444183 TCCGTCTCAAAATAAATGACTCAACTT 59.556 33.333 0.00 0.00 0.00 2.66
4890 8566 8.076178 CCGTCTCAAAATAAATGACTCAACTTT 58.924 33.333 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 125 3.493303 GTCCAGGCCCAGATCCCC 61.493 72.222 0.00 0.00 0.00 4.81
104 128 3.866582 CCGGTCCAGGCCCAGATC 61.867 72.222 0.00 0.00 0.00 2.75
105 129 4.741239 ACCGGTCCAGGCCCAGAT 62.741 66.667 0.00 0.00 33.69 2.90
191 256 2.965572 AAAAAGAAGCAGCAGCAACA 57.034 40.000 3.17 0.00 45.49 3.33
214 279 1.697772 TTCGTTCACACACACGCACC 61.698 55.000 0.00 0.00 36.32 5.01
218 283 1.267334 CCAAGTTCGTTCACACACACG 60.267 52.381 0.00 0.00 37.77 4.49
238 303 2.288213 GGCCAGCAGTTTAAAGGAACAC 60.288 50.000 0.00 0.00 31.94 3.32
276 408 4.483476 AACTTAGCTAAAACCGCAGTTG 57.517 40.909 7.74 0.00 35.97 3.16
279 411 4.219033 CACAAACTTAGCTAAAACCGCAG 58.781 43.478 7.74 0.00 0.00 5.18
282 414 7.181143 TCTTACACAAACTTAGCTAAAACCG 57.819 36.000 7.74 0.00 0.00 4.44
289 421 9.819267 GGAGTATATTCTTACACAAACTTAGCT 57.181 33.333 0.00 0.00 0.00 3.32
290 422 9.819267 AGGAGTATATTCTTACACAAACTTAGC 57.181 33.333 0.00 0.00 0.00 3.09
307 439 9.368416 TGCTAAGACAACAATCTAGGAGTATAT 57.632 33.333 0.00 0.00 0.00 0.86
308 440 8.630917 GTGCTAAGACAACAATCTAGGAGTATA 58.369 37.037 0.00 0.00 0.00 1.47
309 441 7.493367 GTGCTAAGACAACAATCTAGGAGTAT 58.507 38.462 0.00 0.00 0.00 2.12
310 442 6.404403 CGTGCTAAGACAACAATCTAGGAGTA 60.404 42.308 0.00 0.00 0.00 2.59
311 443 5.622460 CGTGCTAAGACAACAATCTAGGAGT 60.622 44.000 0.00 0.00 0.00 3.85
312 444 4.800993 CGTGCTAAGACAACAATCTAGGAG 59.199 45.833 0.00 0.00 0.00 3.69
313 445 4.461431 TCGTGCTAAGACAACAATCTAGGA 59.539 41.667 0.00 0.00 0.00 2.94
314 446 4.744570 TCGTGCTAAGACAACAATCTAGG 58.255 43.478 0.00 0.00 0.00 3.02
315 447 6.893958 ATTCGTGCTAAGACAACAATCTAG 57.106 37.500 0.00 0.00 0.00 2.43
316 448 7.815549 TGTTATTCGTGCTAAGACAACAATCTA 59.184 33.333 0.00 0.00 0.00 1.98
317 449 6.649141 TGTTATTCGTGCTAAGACAACAATCT 59.351 34.615 0.00 0.00 0.00 2.40
318 450 6.827641 TGTTATTCGTGCTAAGACAACAATC 58.172 36.000 0.00 0.00 0.00 2.67
319 451 6.795098 TGTTATTCGTGCTAAGACAACAAT 57.205 33.333 0.00 0.00 0.00 2.71
364 496 7.094720 GCATTCTACTAATAACGAGAGCTCCTA 60.095 40.741 10.93 0.00 0.00 2.94
368 500 6.392625 TGCATTCTACTAATAACGAGAGCT 57.607 37.500 0.00 0.00 0.00 4.09
369 501 7.464830 TTTGCATTCTACTAATAACGAGAGC 57.535 36.000 0.00 0.00 0.00 4.09
402 534 2.357952 GCTCTCCGAACACCTTGTTTTT 59.642 45.455 0.00 0.00 41.28 1.94
403 535 1.947456 GCTCTCCGAACACCTTGTTTT 59.053 47.619 0.00 0.00 41.28 2.43
404 536 1.594331 GCTCTCCGAACACCTTGTTT 58.406 50.000 0.00 0.00 41.28 2.83
405 537 0.600255 CGCTCTCCGAACACCTTGTT 60.600 55.000 0.00 0.00 44.37 2.83
406 538 1.006102 CGCTCTCCGAACACCTTGT 60.006 57.895 0.00 0.00 40.02 3.16
407 539 1.738099 CCGCTCTCCGAACACCTTG 60.738 63.158 0.00 0.00 40.02 3.61
408 540 1.878656 CTCCGCTCTCCGAACACCTT 61.879 60.000 0.00 0.00 40.02 3.50
424 556 7.556275 TCTCTCTCTGTATCTCTTTCTTTCTCC 59.444 40.741 0.00 0.00 0.00 3.71
425 557 8.506168 TCTCTCTCTGTATCTCTTTCTTTCTC 57.494 38.462 0.00 0.00 0.00 2.87
426 558 8.328758 TCTCTCTCTCTGTATCTCTTTCTTTCT 58.671 37.037 0.00 0.00 0.00 2.52
427 559 8.506168 TCTCTCTCTCTGTATCTCTTTCTTTC 57.494 38.462 0.00 0.00 0.00 2.62
428 560 8.328758 TCTCTCTCTCTCTGTATCTCTTTCTTT 58.671 37.037 0.00 0.00 0.00 2.52
429 561 7.861629 TCTCTCTCTCTCTGTATCTCTTTCTT 58.138 38.462 0.00 0.00 0.00 2.52
430 562 7.345653 TCTCTCTCTCTCTCTGTATCTCTTTCT 59.654 40.741 0.00 0.00 0.00 2.52
431 563 7.500992 TCTCTCTCTCTCTCTGTATCTCTTTC 58.499 42.308 0.00 0.00 0.00 2.62
432 564 7.437713 TCTCTCTCTCTCTCTGTATCTCTTT 57.562 40.000 0.00 0.00 0.00 2.52
433 565 7.623999 ATCTCTCTCTCTCTCTGTATCTCTT 57.376 40.000 0.00 0.00 0.00 2.85
434 566 8.756927 CATATCTCTCTCTCTCTCTGTATCTCT 58.243 40.741 0.00 0.00 0.00 3.10
435 567 8.535335 ACATATCTCTCTCTCTCTCTGTATCTC 58.465 40.741 0.00 0.00 0.00 2.75
436 568 8.441311 ACATATCTCTCTCTCTCTCTGTATCT 57.559 38.462 0.00 0.00 0.00 1.98
437 569 8.939929 CAACATATCTCTCTCTCTCTCTGTATC 58.060 40.741 0.00 0.00 0.00 2.24
438 570 8.659527 TCAACATATCTCTCTCTCTCTCTGTAT 58.340 37.037 0.00 0.00 0.00 2.29
441 573 6.994496 AGTCAACATATCTCTCTCTCTCTCTG 59.006 42.308 0.00 0.00 0.00 3.35
457 589 3.576550 TGCTATATCGCCCAGTCAACATA 59.423 43.478 0.00 0.00 0.00 2.29
497 629 1.390287 TAGAGTACCACCACCTCCCT 58.610 55.000 0.00 0.00 0.00 4.20
508 640 4.282195 ACTGCTGCTCCATTATAGAGTACC 59.718 45.833 0.00 0.00 33.69 3.34
524 657 1.268079 GAGGGAAAAGACAACTGCTGC 59.732 52.381 0.00 0.00 0.00 5.25
525 658 1.532868 CGAGGGAAAAGACAACTGCTG 59.467 52.381 0.00 0.00 0.00 4.41
526 659 1.141053 ACGAGGGAAAAGACAACTGCT 59.859 47.619 0.00 0.00 0.00 4.24
573 706 1.724582 GACAGAGAGAGGGAGAGCGC 61.725 65.000 0.00 0.00 0.00 5.92
575 708 1.212935 AGAGACAGAGAGAGGGAGAGC 59.787 57.143 0.00 0.00 0.00 4.09
590 731 2.761208 ACTGCCACTGTATACCAGAGAC 59.239 50.000 11.58 0.00 44.49 3.36
603 747 1.977854 TCCAGACATTGTACTGCCACT 59.022 47.619 9.44 0.00 33.40 4.00
657 802 4.270325 GGATTAAACGAGCACTGGTCATAC 59.730 45.833 8.89 0.00 0.00 2.39
660 805 2.301870 AGGATTAAACGAGCACTGGTCA 59.698 45.455 8.89 0.00 0.00 4.02
672 817 4.329256 GGTTGCGTCTGTCTAGGATTAAAC 59.671 45.833 0.00 0.00 0.00 2.01
673 818 4.020928 TGGTTGCGTCTGTCTAGGATTAAA 60.021 41.667 0.00 0.00 0.00 1.52
674 819 3.512329 TGGTTGCGTCTGTCTAGGATTAA 59.488 43.478 0.00 0.00 0.00 1.40
696 841 2.936202 CTGCAGGGGCTGTGTAATTAT 58.064 47.619 5.57 0.00 41.91 1.28
719 873 1.593750 GCTAGATGGCCTGTCTGCG 60.594 63.158 18.05 11.42 0.00 5.18
720 874 1.000731 CTAGCTAGATGGCCTGTCTGC 59.999 57.143 16.15 17.48 0.00 4.26
728 886 1.822371 GGTAGAGCCTAGCTAGATGGC 59.178 57.143 22.70 17.62 46.42 4.40
741 899 1.043816 TGCATGGCTAGAGGTAGAGC 58.956 55.000 0.00 0.00 38.00 4.09
781 939 3.124051 TTGCCTGTGCTGTGCTCCT 62.124 57.895 0.00 0.00 38.71 3.69
828 994 1.903404 GTGGTGGGAGCTTGGTTGG 60.903 63.158 0.00 0.00 0.00 3.77
847 1013 6.238981 GCTGGAGTAGGACTTTATAGTGGTAC 60.239 46.154 0.00 0.00 33.84 3.34
848 1014 5.832060 GCTGGAGTAGGACTTTATAGTGGTA 59.168 44.000 0.00 0.00 33.84 3.25
853 1019 5.836358 AGAAGGCTGGAGTAGGACTTTATAG 59.164 44.000 0.00 0.00 0.00 1.31
860 1026 1.903183 ACAAGAAGGCTGGAGTAGGAC 59.097 52.381 0.00 0.00 0.00 3.85
861 1027 2.180276 GACAAGAAGGCTGGAGTAGGA 58.820 52.381 0.00 0.00 0.00 2.94
935 1101 0.614979 CGTCCCTCCTCCTTTCTCCA 60.615 60.000 0.00 0.00 0.00 3.86
987 1174 2.503061 CCCATCTCTGGTCTGGCG 59.497 66.667 0.00 0.00 41.37 5.69
1013 1200 1.968540 ACGGCTTCCTGCTTCTTGC 60.969 57.895 0.00 0.00 42.39 4.01
1089 1276 0.761187 CTATGGCCTGCAGGAAGCTA 59.239 55.000 37.21 19.12 45.94 3.32
1119 1306 0.389166 GGAACTCACTGTGCTCTCCG 60.389 60.000 2.12 0.00 0.00 4.63
1125 1312 0.606673 GGGGAAGGAACTCACTGTGC 60.607 60.000 2.12 0.00 38.49 4.57
1143 1330 6.358974 AAGAAGAAGAAGGAGAAGAAGAGG 57.641 41.667 0.00 0.00 0.00 3.69
1149 1336 5.011533 TGTGAGGAAGAAGAAGAAGGAGAAG 59.988 44.000 0.00 0.00 0.00 2.85
1150 1337 4.901849 TGTGAGGAAGAAGAAGAAGGAGAA 59.098 41.667 0.00 0.00 0.00 2.87
1151 1338 4.282195 GTGTGAGGAAGAAGAAGAAGGAGA 59.718 45.833 0.00 0.00 0.00 3.71
1152 1339 4.039730 TGTGTGAGGAAGAAGAAGAAGGAG 59.960 45.833 0.00 0.00 0.00 3.69
1153 1340 3.967326 TGTGTGAGGAAGAAGAAGAAGGA 59.033 43.478 0.00 0.00 0.00 3.36
1154 1341 4.342862 TGTGTGAGGAAGAAGAAGAAGG 57.657 45.455 0.00 0.00 0.00 3.46
1172 1359 6.536224 GCAAATCTTTTGGGAAGGAATATGTG 59.464 38.462 2.50 0.00 0.00 3.21
1184 1371 5.181811 GGAAAATGAAGGCAAATCTTTTGGG 59.818 40.000 2.50 0.00 0.00 4.12
1190 1377 4.082125 ACGAGGAAAATGAAGGCAAATCT 58.918 39.130 0.00 0.00 0.00 2.40
1191 1378 4.440839 ACGAGGAAAATGAAGGCAAATC 57.559 40.909 0.00 0.00 0.00 2.17
1194 1381 3.486383 AGAACGAGGAAAATGAAGGCAA 58.514 40.909 0.00 0.00 0.00 4.52
1195 1382 3.140325 AGAACGAGGAAAATGAAGGCA 57.860 42.857 0.00 0.00 0.00 4.75
1196 1383 4.476862 GAAAGAACGAGGAAAATGAAGGC 58.523 43.478 0.00 0.00 0.00 4.35
1197 1384 4.213482 ACGAAAGAACGAGGAAAATGAAGG 59.787 41.667 0.00 0.00 37.03 3.46
1202 1398 5.270853 CACAAACGAAAGAACGAGGAAAAT 58.729 37.500 0.00 0.00 37.03 1.82
1204 1400 3.486209 GCACAAACGAAAGAACGAGGAAA 60.486 43.478 0.00 0.00 37.03 3.13
1207 1403 1.597663 AGCACAAACGAAAGAACGAGG 59.402 47.619 0.00 0.00 37.03 4.63
1208 1404 3.280775 GAAGCACAAACGAAAGAACGAG 58.719 45.455 0.00 0.00 37.03 4.18
1211 1407 2.543031 GGGGAAGCACAAACGAAAGAAC 60.543 50.000 0.00 0.00 0.00 3.01
1218 1416 1.571215 GGTACGGGGAAGCACAAACG 61.571 60.000 0.00 0.00 0.00 3.60
1225 1423 0.251033 AAAAGTGGGTACGGGGAAGC 60.251 55.000 0.00 0.00 0.00 3.86
1226 1424 2.156917 GAAAAAGTGGGTACGGGGAAG 58.843 52.381 0.00 0.00 0.00 3.46
1227 1425 1.776063 AGAAAAAGTGGGTACGGGGAA 59.224 47.619 0.00 0.00 0.00 3.97
1236 1434 3.796717 GCAAAACGAGAAGAAAAAGTGGG 59.203 43.478 0.00 0.00 0.00 4.61
1259 1458 1.724582 AAACACAGCAGACAACCGGC 61.725 55.000 0.00 0.00 36.16 6.13
1280 1479 8.274248 CGAGAAACTAGATTCATCATTCATGTG 58.726 37.037 14.42 0.00 33.66 3.21
1305 1536 0.443869 GTAACAGCACAGACATGGCG 59.556 55.000 0.00 0.00 0.00 5.69
1363 1598 6.772716 AGAGATTAAAAGGAGACAAACAAGCA 59.227 34.615 0.00 0.00 0.00 3.91
1398 1633 1.369625 GCCCAGGTCACAATTAGTCG 58.630 55.000 0.00 0.00 0.00 4.18
1399 1634 1.282157 AGGCCCAGGTCACAATTAGTC 59.718 52.381 0.00 0.00 0.00 2.59
1436 1676 2.838202 CTGAAGAACCAGCTTAGGGGTA 59.162 50.000 0.00 0.00 36.05 3.69
1439 1679 1.630878 ACCTGAAGAACCAGCTTAGGG 59.369 52.381 0.00 0.00 32.97 3.53
1505 1745 5.770162 AGGTTGACTGAAGAAAATAACCTGG 59.230 40.000 0.00 0.00 43.31 4.45
1525 1765 0.392998 GTGATCGATGGGTGCAGGTT 60.393 55.000 0.54 0.00 0.00 3.50
1526 1766 1.221840 GTGATCGATGGGTGCAGGT 59.778 57.895 0.54 0.00 0.00 4.00
1528 1768 0.463204 AGAGTGATCGATGGGTGCAG 59.537 55.000 0.54 0.00 0.00 4.41
1529 1769 0.904649 AAGAGTGATCGATGGGTGCA 59.095 50.000 0.54 0.00 0.00 4.57
1532 1772 0.904649 TGCAAGAGTGATCGATGGGT 59.095 50.000 0.54 0.00 0.00 4.51
1533 1773 2.028420 TTGCAAGAGTGATCGATGGG 57.972 50.000 0.54 0.00 0.00 4.00
1534 1774 3.376234 ACAATTGCAAGAGTGATCGATGG 59.624 43.478 0.54 0.00 0.00 3.51
1537 1777 3.930336 AGACAATTGCAAGAGTGATCGA 58.070 40.909 10.86 0.00 0.00 3.59
1539 1779 5.152097 CACAAGACAATTGCAAGAGTGATC 58.848 41.667 10.86 6.65 0.00 2.92
1605 1846 1.744522 GGGGAGAAGTCAGACTCGTAC 59.255 57.143 2.72 0.00 34.40 3.67
1606 1847 1.678123 CGGGGAGAAGTCAGACTCGTA 60.678 57.143 2.72 0.00 34.40 3.43
1608 1849 0.961358 ACGGGGAGAAGTCAGACTCG 60.961 60.000 2.72 4.54 34.40 4.18
1611 1852 1.070289 ACAAACGGGGAGAAGTCAGAC 59.930 52.381 0.00 0.00 0.00 3.51
1612 1853 1.420430 ACAAACGGGGAGAAGTCAGA 58.580 50.000 0.00 0.00 0.00 3.27
1633 1874 6.071896 CCTCTGTACATCTGTTCAGTACAAGA 60.072 42.308 14.19 0.00 45.06 3.02
1637 1878 4.425520 GCCTCTGTACATCTGTTCAGTAC 58.574 47.826 14.19 0.00 42.00 2.73
1639 1880 2.234908 GGCCTCTGTACATCTGTTCAGT 59.765 50.000 14.19 0.00 42.00 3.41
1640 1881 2.419297 GGGCCTCTGTACATCTGTTCAG 60.419 54.545 0.84 9.85 42.48 3.02
1694 1935 5.613329 TGAAAATGAAAATGGCAGAGCTTT 58.387 33.333 0.00 0.00 0.00 3.51
1743 1986 9.346725 GGCTGATTAAGTAAAGAAAGATTTGTG 57.653 33.333 0.00 0.00 0.00 3.33
1770 2013 7.182930 ACAAGAGATAAAACCTAGGACTTCCAT 59.817 37.037 17.98 5.60 38.89 3.41
1771 2014 6.500751 ACAAGAGATAAAACCTAGGACTTCCA 59.499 38.462 17.98 0.92 38.89 3.53
1779 2022 6.301169 ACAGGGACAAGAGATAAAACCTAG 57.699 41.667 0.00 0.00 0.00 3.02
1789 2101 7.437713 AACATGAATATACAGGGACAAGAGA 57.562 36.000 0.00 0.00 0.00 3.10
1809 2144 5.515626 GCGTCGACAGACTAATTTCTAACAT 59.484 40.000 17.16 0.00 44.93 2.71
1815 2150 4.905412 AAAGCGTCGACAGACTAATTTC 57.095 40.909 17.16 0.00 44.93 2.17
1858 2196 9.950680 TGAACTTTGCTTCTAAAGATTGTAAAG 57.049 29.630 15.46 15.46 39.46 1.85
1870 2208 4.431416 TTGGAGGTGAACTTTGCTTCTA 57.569 40.909 0.00 0.00 0.00 2.10
1871 2209 3.297134 TTGGAGGTGAACTTTGCTTCT 57.703 42.857 0.00 0.00 0.00 2.85
1896 2234 9.347240 TGGTGTAATATTCTACAGGACTAGTAC 57.653 37.037 0.00 0.00 33.92 2.73
1899 2237 8.136165 GTGTGGTGTAATATTCTACAGGACTAG 58.864 40.741 0.00 0.00 32.49 2.57
1904 2242 7.915293 TTTGTGTGGTGTAATATTCTACAGG 57.085 36.000 0.00 0.00 32.49 4.00
2022 2362 2.032290 CCGAGTGTGATAAGCATGCATG 60.032 50.000 22.70 22.70 0.00 4.06
2023 2363 2.216046 CCGAGTGTGATAAGCATGCAT 58.784 47.619 21.98 11.22 0.00 3.96
2024 2364 1.655484 CCGAGTGTGATAAGCATGCA 58.345 50.000 21.98 0.00 0.00 3.96
2078 2433 1.330234 TTTGGAGCAGAGCATTTGCA 58.670 45.000 5.20 0.00 43.92 4.08
2079 2434 2.334838 CTTTTGGAGCAGAGCATTTGC 58.665 47.619 0.00 0.00 41.83 3.68
2123 2478 2.489329 ACAGGGAAACAAATCTCATGCG 59.511 45.455 0.00 0.00 0.00 4.73
2135 2492 3.211045 TCTAAAGTGTGCACAGGGAAAC 58.789 45.455 22.40 7.33 0.00 2.78
2181 2542 6.480320 TCCGTCTCTGAAAGAAAGAAAGAAAG 59.520 38.462 0.00 0.00 46.34 2.62
2182 2543 6.346096 TCCGTCTCTGAAAGAAAGAAAGAAA 58.654 36.000 0.00 0.00 46.34 2.52
2183 2544 5.914033 TCCGTCTCTGAAAGAAAGAAAGAA 58.086 37.500 0.00 0.00 46.34 2.52
2184 2545 5.531122 TCCGTCTCTGAAAGAAAGAAAGA 57.469 39.130 0.00 0.00 46.34 2.52
2268 2629 2.053865 ACATGAAGGGCGCATTGGG 61.054 57.895 10.83 0.00 0.00 4.12
2269 2630 1.140161 CACATGAAGGGCGCATTGG 59.860 57.895 10.83 0.00 0.00 3.16
2270 2631 1.517694 GCACATGAAGGGCGCATTG 60.518 57.895 10.83 0.00 36.57 2.82
2271 2632 2.887360 GCACATGAAGGGCGCATT 59.113 55.556 10.83 2.51 36.57 3.56
2341 2702 5.516090 TGTCTTTTTAACTTGAACGCATCC 58.484 37.500 0.00 0.00 0.00 3.51
2369 2731 3.826157 TGTCAAGATTAGGCCACCAAAAG 59.174 43.478 5.01 0.00 0.00 2.27
2399 2761 1.344438 CAAAGACCCCAAGGAAAAGGC 59.656 52.381 0.00 0.00 36.73 4.35
2460 2827 1.986210 GGCCTCCTTGCATGCCTTT 60.986 57.895 16.68 0.00 40.77 3.11
2524 2894 6.647067 GGAGTAGTAATCATCAATGCAGTACC 59.353 42.308 0.00 0.00 0.00 3.34
2682 3061 1.154413 CGTGGCTACTTTTGCAGCG 60.154 57.895 0.00 0.00 39.67 5.18
2748 3127 7.909485 AGGGAGATGAAAGCAAATAATTCAT 57.091 32.000 0.22 0.22 44.23 2.57
2750 3129 8.907885 AGTAAGGGAGATGAAAGCAAATAATTC 58.092 33.333 0.00 0.00 0.00 2.17
2775 3166 7.362662 ACAATTTGTGTGTGAGCAAGTAATAG 58.637 34.615 0.15 0.00 39.72 1.73
2800 3191 7.840931 TCAGCTAGATCAGATACTCAACAAAA 58.159 34.615 0.00 0.00 0.00 2.44
2809 3200 4.335416 AGGAGCTCAGCTAGATCAGATAC 58.665 47.826 17.19 0.00 42.69 2.24
2818 3209 1.533731 GCTACGTAGGAGCTCAGCTAG 59.466 57.143 23.47 7.32 39.88 3.42
2841 3232 2.289569 GGGACATTTGGCAGATGCAAAA 60.290 45.455 17.11 9.69 46.76 2.44
2842 3233 1.275856 GGGACATTTGGCAGATGCAAA 59.724 47.619 17.11 0.00 44.36 3.68
2844 3235 0.040058 AGGGACATTTGGCAGATGCA 59.960 50.000 17.11 0.00 44.36 3.96
2847 3238 1.565759 TGCTAGGGACATTTGGCAGAT 59.434 47.619 0.00 0.00 0.00 2.90
2848 3239 0.991146 TGCTAGGGACATTTGGCAGA 59.009 50.000 0.00 0.00 0.00 4.26
2851 3242 1.410153 CCAATGCTAGGGACATTTGGC 59.590 52.381 0.00 0.00 35.58 4.52
2853 3244 3.355378 TGACCAATGCTAGGGACATTTG 58.645 45.455 0.00 0.00 35.58 2.32
2854 3245 3.624777 CTGACCAATGCTAGGGACATTT 58.375 45.455 0.00 0.00 35.58 2.32
2855 3246 2.684927 GCTGACCAATGCTAGGGACATT 60.685 50.000 0.00 0.00 38.25 2.71
2875 3267 8.957466 ACCCAGTTAAAATATTCTAAACTCTGC 58.043 33.333 6.93 0.00 0.00 4.26
2921 3314 3.073062 AGTGGATTGGATGGTAGTATGGC 59.927 47.826 0.00 0.00 0.00 4.40
2970 3368 1.419387 ACATTCCAGCTCCCTCATAGC 59.581 52.381 0.00 0.00 40.40 2.97
3055 3456 0.738412 ACACGCACCGGCAACTATAC 60.738 55.000 0.00 0.00 41.24 1.47
3099 3521 3.198872 GGTGTTCACAAGCCTAGCTATC 58.801 50.000 0.00 0.00 38.25 2.08
3117 3539 5.180492 ACATTGTCCTTGTACAAATACGGTG 59.820 40.000 10.03 13.63 42.33 4.94
3142 3564 2.501602 GCAAGTGCAAAGGTGGCCT 61.502 57.895 3.32 0.00 41.59 5.19
3143 3565 2.029518 GCAAGTGCAAAGGTGGCC 59.970 61.111 0.00 0.00 41.59 5.36
3156 3578 3.868077 GGCTACATTGTCTCTACTGCAAG 59.132 47.826 0.00 0.00 42.29 4.01
3157 3579 3.369471 GGGCTACATTGTCTCTACTGCAA 60.369 47.826 0.00 0.00 0.00 4.08
3158 3580 2.168521 GGGCTACATTGTCTCTACTGCA 59.831 50.000 0.00 0.00 0.00 4.41
3159 3581 2.799917 CGGGCTACATTGTCTCTACTGC 60.800 54.545 0.00 0.00 0.00 4.40
3160 3582 2.799917 GCGGGCTACATTGTCTCTACTG 60.800 54.545 0.00 0.00 0.00 2.74
3161 3583 1.409427 GCGGGCTACATTGTCTCTACT 59.591 52.381 0.00 0.00 0.00 2.57
3162 3584 1.854227 GCGGGCTACATTGTCTCTAC 58.146 55.000 0.00 0.00 0.00 2.59
3163 3585 0.384309 CGCGGGCTACATTGTCTCTA 59.616 55.000 0.00 0.00 0.00 2.43
3164 3586 1.141881 CGCGGGCTACATTGTCTCT 59.858 57.895 0.00 0.00 0.00 3.10
3165 3587 0.739813 AACGCGGGCTACATTGTCTC 60.740 55.000 12.47 0.00 0.00 3.36
3166 3588 1.019278 CAACGCGGGCTACATTGTCT 61.019 55.000 12.47 0.00 0.00 3.41
3167 3589 1.423845 CAACGCGGGCTACATTGTC 59.576 57.895 12.47 0.00 0.00 3.18
3168 3590 2.686816 GCAACGCGGGCTACATTGT 61.687 57.895 12.47 0.00 0.00 2.71
3169 3591 2.100216 GCAACGCGGGCTACATTG 59.900 61.111 12.47 4.89 0.00 2.82
3170 3592 2.359354 TGCAACGCGGGCTACATT 60.359 55.556 22.52 0.00 0.00 2.71
3171 3593 3.124921 GTGCAACGCGGGCTACAT 61.125 61.111 22.52 0.00 0.00 2.29
3172 3594 3.818121 AAGTGCAACGCGGGCTACA 62.818 57.895 22.52 6.08 45.86 2.74
3173 3595 3.047877 AAGTGCAACGCGGGCTAC 61.048 61.111 22.52 18.12 45.86 3.58
3174 3596 3.047280 CAAGTGCAACGCGGGCTA 61.047 61.111 22.52 9.16 45.86 3.93
3240 3662 0.179084 ATGAATGCCGACGGGTACAG 60.179 55.000 17.22 0.00 34.97 2.74
3262 3687 6.208204 ACGTAATTCTACCCGCACTATAATCT 59.792 38.462 0.00 0.00 0.00 2.40
3266 3691 5.762711 TGTACGTAATTCTACCCGCACTATA 59.237 40.000 0.00 0.00 0.00 1.31
3286 3711 6.401796 CCACCAGAAAAGCTATAACGTTGTAC 60.402 42.308 11.99 4.03 0.00 2.90
3287 3712 5.640357 CCACCAGAAAAGCTATAACGTTGTA 59.360 40.000 11.99 7.93 0.00 2.41
3288 3713 4.454504 CCACCAGAAAAGCTATAACGTTGT 59.545 41.667 11.99 6.97 0.00 3.32
3349 3776 6.183360 GCCTTATGTGTTTCAGAGAAGCTAAG 60.183 42.308 0.00 0.00 0.00 2.18
3359 3786 2.884012 TGTGTGGCCTTATGTGTTTCAG 59.116 45.455 3.32 0.00 0.00 3.02
3360 3787 2.937519 TGTGTGGCCTTATGTGTTTCA 58.062 42.857 3.32 0.00 0.00 2.69
3372 3799 5.465724 GCTAGTACACTATTTATGTGTGGCC 59.534 44.000 9.42 0.00 46.54 5.36
3373 3800 6.281405 AGCTAGTACACTATTTATGTGTGGC 58.719 40.000 9.42 8.23 46.54 5.01
3374 3801 7.489160 TGAGCTAGTACACTATTTATGTGTGG 58.511 38.462 9.42 0.23 46.54 4.17
3375 3802 8.406297 TCTGAGCTAGTACACTATTTATGTGTG 58.594 37.037 9.42 0.00 46.54 3.82
3382 3809 9.137459 ACATGTATCTGAGCTAGTACACTATTT 57.863 33.333 0.00 0.00 30.89 1.40
3384 3811 7.175816 CCACATGTATCTGAGCTAGTACACTAT 59.824 40.741 0.00 0.00 30.89 2.12
3385 3812 6.486993 CCACATGTATCTGAGCTAGTACACTA 59.513 42.308 0.00 0.00 30.89 2.74
3403 3836 5.003804 CCTAGCTTCAGTAAAACCACATGT 58.996 41.667 0.00 0.00 0.00 3.21
3405 3838 5.499004 TCCTAGCTTCAGTAAAACCACAT 57.501 39.130 0.00 0.00 0.00 3.21
3439 3886 5.455392 CATTCAGATTTGACACTGTTGGAC 58.545 41.667 0.00 0.00 35.84 4.02
3448 3895 3.433343 ACCATGCCATTCAGATTTGACA 58.567 40.909 0.00 0.00 31.71 3.58
3475 3922 5.708948 TCTCAAATTTATTTCCTTGGCGTG 58.291 37.500 0.00 0.00 0.00 5.34
3476 3923 5.476945 ACTCTCAAATTTATTTCCTTGGCGT 59.523 36.000 0.00 0.00 0.00 5.68
3477 3924 5.954335 ACTCTCAAATTTATTTCCTTGGCG 58.046 37.500 0.00 0.00 0.00 5.69
3605 4058 1.405661 GGGTAGTAGTGTGCTTCTGGC 60.406 57.143 0.00 0.00 42.22 4.85
3623 4079 0.397941 TCTTCACTGCAAGACCAGGG 59.602 55.000 0.00 0.00 37.59 4.45
3635 4091 1.140312 TGGGGTCTTGCTTCTTCACT 58.860 50.000 0.00 0.00 0.00 3.41
3651 4107 1.000396 CCTTGGGCTTCTCCTTGGG 60.000 63.158 0.00 0.00 34.39 4.12
3652 4108 0.034670 CTCCTTGGGCTTCTCCTTGG 60.035 60.000 0.00 0.00 34.39 3.61
3653 4109 0.987294 TCTCCTTGGGCTTCTCCTTG 59.013 55.000 0.00 0.00 34.39 3.61
3654 4110 1.632920 CTTCTCCTTGGGCTTCTCCTT 59.367 52.381 0.00 0.00 34.39 3.36
3655 4111 1.284313 CTTCTCCTTGGGCTTCTCCT 58.716 55.000 0.00 0.00 34.39 3.69
3656 4112 0.254462 CCTTCTCCTTGGGCTTCTCC 59.746 60.000 0.00 0.00 0.00 3.71
3657 4113 1.065782 GTCCTTCTCCTTGGGCTTCTC 60.066 57.143 0.00 0.00 0.00 2.87
3658 4114 0.988063 GTCCTTCTCCTTGGGCTTCT 59.012 55.000 0.00 0.00 0.00 2.85
3659 4115 0.693049 TGTCCTTCTCCTTGGGCTTC 59.307 55.000 0.00 0.00 0.00 3.86
3660 4116 0.695347 CTGTCCTTCTCCTTGGGCTT 59.305 55.000 0.00 0.00 0.00 4.35
3661 4117 1.846712 GCTGTCCTTCTCCTTGGGCT 61.847 60.000 0.00 0.00 0.00 5.19
3662 4118 1.377856 GCTGTCCTTCTCCTTGGGC 60.378 63.158 0.00 0.00 0.00 5.36
3721 4177 3.917760 GGAGGCATCTCGGGTCCG 61.918 72.222 2.52 2.52 40.85 4.79
3743 4202 2.483745 GGCGACGACGATGAGACA 59.516 61.111 12.29 0.00 42.66 3.41
3804 4263 3.024217 GGAGCTCCTCCTCCTCCT 58.976 66.667 26.25 0.00 46.41 3.69
3910 4372 5.781223 TCGATCGATGTACAAAATTTCACG 58.219 37.500 15.15 0.00 0.00 4.35
3911 4373 7.807407 GATCGATCGATGTACAAAATTTCAC 57.193 36.000 33.86 11.18 34.60 3.18
3932 4394 2.353269 ACGAGTGACAGACAGATCGATC 59.647 50.000 17.91 17.91 39.64 3.69
3933 4395 2.360844 ACGAGTGACAGACAGATCGAT 58.639 47.619 0.00 0.00 39.64 3.59
3934 4396 1.809684 ACGAGTGACAGACAGATCGA 58.190 50.000 12.35 0.00 39.64 3.59
3935 4397 2.620779 AACGAGTGACAGACAGATCG 57.379 50.000 0.00 6.06 41.58 3.69
3936 4398 2.989840 CCAAACGAGTGACAGACAGATC 59.010 50.000 0.00 0.00 0.00 2.75
3959 4422 3.008375 GGCTAATCATCCTAGCACCATGA 59.992 47.826 0.00 0.00 43.01 3.07
3981 4444 1.923356 AACCTAACCACCTGCCATTG 58.077 50.000 0.00 0.00 0.00 2.82
3992 4455 6.803366 TGAACTCCTAATCCTAACCTAACC 57.197 41.667 0.00 0.00 0.00 2.85
4068 4540 2.186076 CGACCGTGATACTCTGAAAGC 58.814 52.381 0.00 0.00 0.00 3.51
4076 4548 0.601558 AACAGTGCGACCGTGATACT 59.398 50.000 0.00 0.00 0.00 2.12
4078 4550 1.011968 GCAACAGTGCGACCGTGATA 61.012 55.000 0.00 0.00 41.93 2.15
4104 4576 0.540365 TCTTCTTTGCTGGCCCAAGG 60.540 55.000 0.00 0.00 0.00 3.61
4129 4601 2.022240 ATCTCCCTCGCTCGCCTTTC 62.022 60.000 0.00 0.00 0.00 2.62
4167 4639 2.036346 CAGTTTCAGGCAAAGGAAAGGG 59.964 50.000 0.00 0.00 33.99 3.95
4169 4641 4.363138 GAACAGTTTCAGGCAAAGGAAAG 58.637 43.478 0.00 0.00 33.99 2.62
4196 4668 1.469940 CCGGAGAGCTACATGTGACAC 60.470 57.143 9.11 0.00 0.00 3.67
4197 4669 0.817654 CCGGAGAGCTACATGTGACA 59.182 55.000 9.11 0.00 0.00 3.58
4211 4683 1.151908 CTCCCTCCCTACTCCGGAG 59.848 68.421 30.11 30.11 45.65 4.63
4230 4702 0.603975 GGGAATACTGCGCATCTCCC 60.604 60.000 22.77 22.77 36.01 4.30
4237 4728 1.723870 CTGCAAGGGAATACTGCGC 59.276 57.895 0.00 0.00 0.00 6.09
4270 4807 1.372004 GCATCAGCACGCTTTTGCA 60.372 52.632 14.83 0.00 45.62 4.08
4278 7924 2.486663 ATGGCATGGCATCAGCACG 61.487 57.895 27.75 0.00 44.61 5.34
4285 7931 1.491668 ACAACATCATGGCATGGCAT 58.508 45.000 27.75 27.75 0.00 4.40
4286 7932 1.268066 AACAACATCATGGCATGGCA 58.732 45.000 25.52 25.52 0.00 4.92
4287 7933 2.093869 AGAAACAACATCATGGCATGGC 60.094 45.455 26.15 13.29 0.00 4.40
4288 7934 3.880047 AGAAACAACATCATGGCATGG 57.120 42.857 26.15 14.18 0.00 3.66
4289 7935 5.571784 AGTAGAAACAACATCATGGCATG 57.428 39.130 21.42 21.42 0.00 4.06
4290 7936 5.948162 AGAAGTAGAAACAACATCATGGCAT 59.052 36.000 0.00 0.00 0.00 4.40
4342 7999 0.809241 ATTCTCGTAGCAGCTGCAGC 60.809 55.000 38.24 31.53 45.16 5.25
4343 8000 2.123342 GTATTCTCGTAGCAGCTGCAG 58.877 52.381 38.24 26.56 45.16 4.41
4344 8001 1.202417 GGTATTCTCGTAGCAGCTGCA 60.202 52.381 38.24 22.31 45.16 4.41
4345 8002 1.492720 GGTATTCTCGTAGCAGCTGC 58.507 55.000 31.53 31.53 42.49 5.25
4346 8003 1.683917 AGGGTATTCTCGTAGCAGCTG 59.316 52.381 10.11 10.11 0.00 4.24
4347 8004 1.683917 CAGGGTATTCTCGTAGCAGCT 59.316 52.381 0.00 0.00 0.00 4.24
4348 8005 1.681793 TCAGGGTATTCTCGTAGCAGC 59.318 52.381 0.00 0.00 0.00 5.25
4423 8080 0.039617 CTCTGGACGATGCTCGATCC 60.040 60.000 11.64 13.18 43.74 3.36
4431 8088 7.254137 CACCTACATATATTCTCTGGACGATG 58.746 42.308 0.00 0.00 0.00 3.84
4432 8089 6.378564 CCACCTACATATATTCTCTGGACGAT 59.621 42.308 0.00 0.00 0.00 3.73
4433 8090 5.710567 CCACCTACATATATTCTCTGGACGA 59.289 44.000 0.00 0.00 0.00 4.20
4581 8242 3.854389 TCTGTACTAGGACTAGGGGTGAA 59.146 47.826 6.66 0.00 37.49 3.18
4586 8247 3.053095 TGGGTTCTGTACTAGGACTAGGG 60.053 52.174 6.66 0.00 35.07 3.53
4678 8339 1.130955 CGCCATGTTCAGTTTTGCAC 58.869 50.000 0.00 0.00 0.00 4.57
4687 8348 2.361104 GCCCCTTCGCCATGTTCA 60.361 61.111 0.00 0.00 0.00 3.18
4726 8387 1.459592 CCTGGTGAAATCGTGTTCGTC 59.540 52.381 0.00 0.00 38.33 4.20
4727 8388 1.508632 CCTGGTGAAATCGTGTTCGT 58.491 50.000 0.00 0.00 38.33 3.85
4728 8389 0.165944 GCCTGGTGAAATCGTGTTCG 59.834 55.000 0.00 0.00 38.55 3.95
4729 8390 1.523758 AGCCTGGTGAAATCGTGTTC 58.476 50.000 0.00 0.00 0.00 3.18
4730 8391 1.880027 GAAGCCTGGTGAAATCGTGTT 59.120 47.619 0.00 0.00 0.00 3.32
4731 8392 1.202758 TGAAGCCTGGTGAAATCGTGT 60.203 47.619 0.00 0.00 0.00 4.49
4740 8401 1.880027 GGTGTTAAGTGAAGCCTGGTG 59.120 52.381 0.00 0.00 0.00 4.17
4757 8418 1.970114 CAGGGCAAGTGAGCTGGTG 60.970 63.158 0.00 0.00 34.17 4.17
4760 8421 1.321474 TTTTCAGGGCAAGTGAGCTG 58.679 50.000 0.00 0.00 34.17 4.24
4761 8422 1.683385 GTTTTTCAGGGCAAGTGAGCT 59.317 47.619 0.00 0.00 34.17 4.09
4780 8448 1.871418 TGGCTCTGCTCTAATGAGGT 58.129 50.000 0.00 0.00 40.53 3.85
4843 8519 5.105837 ACGGAGGTAGTACATCTTTTGACTC 60.106 44.000 14.16 2.56 0.00 3.36
4858 8534 7.042335 AGTCATTTATTTTGAGACGGAGGTAG 58.958 38.462 0.00 0.00 34.56 3.18
4859 8535 6.942976 AGTCATTTATTTTGAGACGGAGGTA 58.057 36.000 0.00 0.00 34.56 3.08
4860 8536 5.805728 AGTCATTTATTTTGAGACGGAGGT 58.194 37.500 0.00 0.00 34.56 3.85
4862 8538 6.968131 TGAGTCATTTATTTTGAGACGGAG 57.032 37.500 0.00 0.00 34.56 4.63
4863 8539 6.934645 AGTTGAGTCATTTATTTTGAGACGGA 59.065 34.615 0.00 0.00 34.56 4.69
4864 8540 7.133891 AGTTGAGTCATTTATTTTGAGACGG 57.866 36.000 0.00 0.00 34.56 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.