Multiple sequence alignment - TraesCS2A01G402600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G402600 chr2A 100.000 2588 0 0 1 2588 656949535 656952122 0.000000e+00 4780
1 TraesCS2A01G402600 chr2A 92.560 336 24 1 2235 2570 656951429 656951763 5.010000e-132 481
2 TraesCS2A01G402600 chr2A 92.560 336 24 1 1895 2229 656951769 656952104 5.010000e-132 481
3 TraesCS2A01G402600 chr2A 86.945 383 39 7 3 380 407383275 407382899 1.110000e-113 420
4 TraesCS2A01G402600 chr2D 93.204 2222 109 20 377 2588 513088211 513090400 0.000000e+00 3229
5 TraesCS2A01G402600 chr2D 92.468 385 23 6 377 758 513086273 513086654 1.750000e-151 545
6 TraesCS2A01G402600 chr2D 89.881 336 30 2 1895 2229 513090050 513090382 1.840000e-116 429
7 TraesCS2A01G402600 chr2D 94.526 274 14 1 2297 2570 513089772 513090044 3.080000e-114 422
8 TraesCS2A01G402600 chr2D 87.413 286 31 5 377 660 513036546 513036828 8.930000e-85 324
9 TraesCS2A01G402600 chr2B 94.012 1670 76 10 930 2588 603662430 603664086 0.000000e+00 2508
10 TraesCS2A01G402600 chr2B 91.964 336 27 0 2235 2570 603663390 603663725 3.010000e-129 472
11 TraesCS2A01G402600 chr2B 88.563 341 30 3 1895 2229 603663731 603664068 3.100000e-109 405
12 TraesCS2A01G402600 chr4A 91.268 355 26 5 1 354 352783944 352784294 1.800000e-131 479
13 TraesCS2A01G402600 chr4A 90.678 354 32 1 1 354 237292250 237292602 1.080000e-128 470
14 TraesCS2A01G402600 chr5B 89.685 349 32 4 8 354 279135019 279135365 2.360000e-120 442
15 TraesCS2A01G402600 chr1D 89.014 355 35 3 1 354 164210368 164210719 1.100000e-118 436
16 TraesCS2A01G402600 chr4D 88.732 355 37 3 4 357 111390426 111390074 5.120000e-117 431
17 TraesCS2A01G402600 chr4D 88.140 371 29 12 14 380 432661960 432662319 6.620000e-116 427
18 TraesCS2A01G402600 chr3D 88.108 370 31 11 14 380 474138276 474137917 6.620000e-116 427
19 TraesCS2A01G402600 chr7D 87.240 384 34 13 1 380 316980744 316981116 8.560000e-115 424


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G402600 chr2A 656949535 656952122 2587 False 1914.000000 4780 95.04000 1 2588 3 chr2A.!!$F1 2587
1 TraesCS2A01G402600 chr2D 513086273 513090400 4127 False 1156.250000 3229 92.51975 377 2588 4 chr2D.!!$F2 2211
2 TraesCS2A01G402600 chr2B 603662430 603664086 1656 False 1128.333333 2508 91.51300 930 2588 3 chr2B.!!$F1 1658

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
264 265 0.036952 AAGAGGTGCACCGACATGAG 60.037 55.0 29.68 0.0 42.08 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1956 3919 0.03601 ATACAGCCAGGCAGACACAC 60.036 55.0 15.8 0.0 0.0 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.068008 GTAACTCTGAGAAAATTAGAAGAGTCG 57.932 37.037 12.44 0.00 42.59 4.18
29 30 6.626302 ACTCTGAGAAAATTAGAAGAGTCGG 58.374 40.000 12.44 0.00 40.11 4.79
30 31 5.967088 TCTGAGAAAATTAGAAGAGTCGGG 58.033 41.667 0.00 0.00 0.00 5.14
31 32 5.480772 TCTGAGAAAATTAGAAGAGTCGGGT 59.519 40.000 0.00 0.00 0.00 5.28
32 33 6.662234 TCTGAGAAAATTAGAAGAGTCGGGTA 59.338 38.462 0.00 0.00 0.00 3.69
33 34 7.177921 TCTGAGAAAATTAGAAGAGTCGGGTAA 59.822 37.037 0.00 0.00 0.00 2.85
34 35 7.673180 TGAGAAAATTAGAAGAGTCGGGTAAA 58.327 34.615 0.00 0.00 0.00 2.01
35 36 8.152246 TGAGAAAATTAGAAGAGTCGGGTAAAA 58.848 33.333 0.00 0.00 0.00 1.52
36 37 9.163899 GAGAAAATTAGAAGAGTCGGGTAAAAT 57.836 33.333 0.00 0.00 0.00 1.82
37 38 9.163899 AGAAAATTAGAAGAGTCGGGTAAAATC 57.836 33.333 0.00 0.00 0.00 2.17
38 39 7.860918 AAATTAGAAGAGTCGGGTAAAATCC 57.139 36.000 0.00 0.00 0.00 3.01
39 40 6.809976 ATTAGAAGAGTCGGGTAAAATCCT 57.190 37.500 0.00 0.00 0.00 3.24
40 41 4.473477 AGAAGAGTCGGGTAAAATCCTG 57.527 45.455 0.00 0.00 35.33 3.86
41 42 3.197983 AGAAGAGTCGGGTAAAATCCTGG 59.802 47.826 0.00 0.00 34.81 4.45
42 43 1.838077 AGAGTCGGGTAAAATCCTGGG 59.162 52.381 0.00 0.00 34.81 4.45
43 44 1.835531 GAGTCGGGTAAAATCCTGGGA 59.164 52.381 0.00 0.00 34.81 4.37
44 45 2.237893 GAGTCGGGTAAAATCCTGGGAA 59.762 50.000 0.00 0.00 34.81 3.97
45 46 2.645797 AGTCGGGTAAAATCCTGGGAAA 59.354 45.455 0.00 0.00 34.81 3.13
46 47 3.074836 AGTCGGGTAAAATCCTGGGAAAA 59.925 43.478 0.00 0.00 34.81 2.29
47 48 3.442625 GTCGGGTAAAATCCTGGGAAAAG 59.557 47.826 0.00 0.00 34.81 2.27
48 49 3.331294 TCGGGTAAAATCCTGGGAAAAGA 59.669 43.478 0.00 0.00 34.81 2.52
49 50 3.442625 CGGGTAAAATCCTGGGAAAAGAC 59.557 47.826 0.00 0.00 0.00 3.01
50 51 3.767673 GGGTAAAATCCTGGGAAAAGACC 59.232 47.826 0.00 0.24 0.00 3.85
51 52 4.510386 GGGTAAAATCCTGGGAAAAGACCT 60.510 45.833 0.00 0.00 0.00 3.85
52 53 4.462834 GGTAAAATCCTGGGAAAAGACCTG 59.537 45.833 0.00 0.00 0.00 4.00
53 54 3.903530 AAATCCTGGGAAAAGACCTGT 57.096 42.857 0.00 0.00 0.00 4.00
54 55 2.887151 ATCCTGGGAAAAGACCTGTG 57.113 50.000 0.00 0.00 0.00 3.66
55 56 0.771127 TCCTGGGAAAAGACCTGTGG 59.229 55.000 0.00 0.00 0.00 4.17
56 57 0.251341 CCTGGGAAAAGACCTGTGGG 60.251 60.000 0.00 0.00 38.88 4.61
64 65 1.498176 AAGACCTGTGGGTTAGGGCC 61.498 60.000 0.00 0.00 44.93 5.80
65 66 2.939353 ACCTGTGGGTTAGGGCCC 60.939 66.667 16.46 16.46 44.73 5.80
73 74 3.757836 GGTTAGGGCCCACTCAAAA 57.242 52.632 27.56 5.03 0.00 2.44
74 75 1.545841 GGTTAGGGCCCACTCAAAAG 58.454 55.000 27.56 0.00 0.00 2.27
75 76 1.074889 GGTTAGGGCCCACTCAAAAGA 59.925 52.381 27.56 0.00 0.00 2.52
76 77 2.490168 GGTTAGGGCCCACTCAAAAGAA 60.490 50.000 27.56 0.15 0.00 2.52
77 78 3.227614 GTTAGGGCCCACTCAAAAGAAA 58.772 45.455 27.56 0.00 0.00 2.52
78 79 1.704641 AGGGCCCACTCAAAAGAAAC 58.295 50.000 27.56 0.00 0.00 2.78
79 80 1.063266 AGGGCCCACTCAAAAGAAACA 60.063 47.619 27.56 0.00 0.00 2.83
80 81 1.068588 GGGCCCACTCAAAAGAAACAC 59.931 52.381 19.95 0.00 0.00 3.32
81 82 1.068588 GGCCCACTCAAAAGAAACACC 59.931 52.381 0.00 0.00 0.00 4.16
82 83 1.269051 GCCCACTCAAAAGAAACACCG 60.269 52.381 0.00 0.00 0.00 4.94
83 84 2.021457 CCCACTCAAAAGAAACACCGT 58.979 47.619 0.00 0.00 0.00 4.83
84 85 2.425668 CCCACTCAAAAGAAACACCGTT 59.574 45.455 0.00 0.00 0.00 4.44
85 86 3.434637 CCACTCAAAAGAAACACCGTTG 58.565 45.455 0.00 0.00 0.00 4.10
86 87 3.434637 CACTCAAAAGAAACACCGTTGG 58.565 45.455 0.00 0.00 0.00 3.77
87 88 3.127895 CACTCAAAAGAAACACCGTTGGA 59.872 43.478 0.00 0.00 0.00 3.53
88 89 3.759618 ACTCAAAAGAAACACCGTTGGAA 59.240 39.130 0.00 0.00 0.00 3.53
89 90 4.218852 ACTCAAAAGAAACACCGTTGGAAA 59.781 37.500 0.00 0.00 0.00 3.13
90 91 5.105513 ACTCAAAAGAAACACCGTTGGAAAT 60.106 36.000 0.00 0.00 0.00 2.17
91 92 5.105752 TCAAAAGAAACACCGTTGGAAATG 58.894 37.500 0.00 0.00 0.00 2.32
92 93 4.993029 AAAGAAACACCGTTGGAAATGA 57.007 36.364 0.00 0.00 33.73 2.57
93 94 5.529581 AAAGAAACACCGTTGGAAATGAT 57.470 34.783 0.00 0.00 33.73 2.45
94 95 5.529581 AAGAAACACCGTTGGAAATGATT 57.470 34.783 0.00 0.00 33.73 2.57
95 96 4.870363 AGAAACACCGTTGGAAATGATTG 58.130 39.130 0.00 0.00 33.73 2.67
96 97 2.723124 ACACCGTTGGAAATGATTGC 57.277 45.000 0.00 0.00 33.73 3.56
97 98 2.238521 ACACCGTTGGAAATGATTGCT 58.761 42.857 0.00 0.00 33.73 3.91
98 99 2.627699 ACACCGTTGGAAATGATTGCTT 59.372 40.909 0.00 0.00 33.73 3.91
99 100 3.823873 ACACCGTTGGAAATGATTGCTTA 59.176 39.130 0.00 0.00 33.73 3.09
100 101 4.082787 ACACCGTTGGAAATGATTGCTTAG 60.083 41.667 0.00 0.00 33.73 2.18
101 102 3.443681 ACCGTTGGAAATGATTGCTTAGG 59.556 43.478 0.00 0.00 33.73 2.69
102 103 3.694072 CCGTTGGAAATGATTGCTTAGGA 59.306 43.478 0.00 0.00 33.73 2.94
103 104 4.157656 CCGTTGGAAATGATTGCTTAGGAA 59.842 41.667 0.00 0.00 33.73 3.36
104 105 5.335127 CGTTGGAAATGATTGCTTAGGAAG 58.665 41.667 0.00 0.00 33.73 3.46
105 106 5.123820 CGTTGGAAATGATTGCTTAGGAAGA 59.876 40.000 0.00 0.00 33.73 2.87
106 107 6.558909 GTTGGAAATGATTGCTTAGGAAGAG 58.441 40.000 0.00 0.00 0.00 2.85
107 108 6.065976 TGGAAATGATTGCTTAGGAAGAGA 57.934 37.500 0.00 0.00 0.00 3.10
108 109 6.666678 TGGAAATGATTGCTTAGGAAGAGAT 58.333 36.000 0.00 0.00 0.00 2.75
109 110 6.544931 TGGAAATGATTGCTTAGGAAGAGATG 59.455 38.462 0.00 0.00 0.00 2.90
110 111 6.769822 GGAAATGATTGCTTAGGAAGAGATGA 59.230 38.462 0.00 0.00 0.00 2.92
111 112 7.447853 GGAAATGATTGCTTAGGAAGAGATGAT 59.552 37.037 0.00 0.00 0.00 2.45
112 113 7.747155 AATGATTGCTTAGGAAGAGATGATG 57.253 36.000 0.00 0.00 0.00 3.07
113 114 5.061853 TGATTGCTTAGGAAGAGATGATGC 58.938 41.667 0.00 0.00 0.00 3.91
114 115 4.492494 TTGCTTAGGAAGAGATGATGCA 57.508 40.909 0.00 0.00 0.00 3.96
115 116 3.801698 TGCTTAGGAAGAGATGATGCAC 58.198 45.455 0.00 0.00 0.00 4.57
116 117 3.137533 GCTTAGGAAGAGATGATGCACC 58.862 50.000 0.00 0.00 0.00 5.01
117 118 3.388308 CTTAGGAAGAGATGATGCACCG 58.612 50.000 0.00 0.00 0.00 4.94
118 119 0.467384 AGGAAGAGATGATGCACCGG 59.533 55.000 0.00 0.00 0.00 5.28
119 120 0.179000 GGAAGAGATGATGCACCGGT 59.821 55.000 0.00 0.00 0.00 5.28
120 121 1.407437 GGAAGAGATGATGCACCGGTT 60.407 52.381 2.97 0.00 0.00 4.44
121 122 1.667724 GAAGAGATGATGCACCGGTTG 59.332 52.381 2.97 1.23 0.00 3.77
122 123 0.904649 AGAGATGATGCACCGGTTGA 59.095 50.000 2.97 0.00 0.00 3.18
123 124 1.487976 AGAGATGATGCACCGGTTGAT 59.512 47.619 2.97 0.00 0.00 2.57
124 125 2.092753 AGAGATGATGCACCGGTTGATT 60.093 45.455 2.97 0.00 0.00 2.57
125 126 2.684881 GAGATGATGCACCGGTTGATTT 59.315 45.455 2.97 0.00 0.00 2.17
126 127 2.424601 AGATGATGCACCGGTTGATTTG 59.575 45.455 2.97 0.00 0.00 2.32
127 128 1.902938 TGATGCACCGGTTGATTTGA 58.097 45.000 2.97 0.00 0.00 2.69
128 129 2.234143 TGATGCACCGGTTGATTTGAA 58.766 42.857 2.97 0.00 0.00 2.69
129 130 2.030363 TGATGCACCGGTTGATTTGAAC 60.030 45.455 2.97 0.00 0.00 3.18
130 131 0.309302 TGCACCGGTTGATTTGAACG 59.691 50.000 2.97 0.00 0.00 3.95
131 132 0.309612 GCACCGGTTGATTTGAACGT 59.690 50.000 2.97 0.00 0.00 3.99
132 133 1.662026 GCACCGGTTGATTTGAACGTC 60.662 52.381 2.97 0.00 0.00 4.34
133 134 1.871039 CACCGGTTGATTTGAACGTCT 59.129 47.619 2.97 0.00 0.00 4.18
134 135 2.289547 CACCGGTTGATTTGAACGTCTT 59.710 45.455 2.97 0.00 0.00 3.01
135 136 2.289547 ACCGGTTGATTTGAACGTCTTG 59.710 45.455 0.00 0.00 0.00 3.02
136 137 2.546368 CCGGTTGATTTGAACGTCTTGA 59.454 45.455 0.00 0.00 0.00 3.02
137 138 3.002862 CCGGTTGATTTGAACGTCTTGAA 59.997 43.478 0.00 0.00 0.00 2.69
138 139 4.320202 CCGGTTGATTTGAACGTCTTGAAT 60.320 41.667 0.00 0.00 0.00 2.57
139 140 4.612614 CGGTTGATTTGAACGTCTTGAATG 59.387 41.667 0.00 0.00 0.00 2.67
140 141 5.559991 CGGTTGATTTGAACGTCTTGAATGA 60.560 40.000 0.00 0.00 0.00 2.57
141 142 5.853282 GGTTGATTTGAACGTCTTGAATGAG 59.147 40.000 0.00 0.00 0.00 2.90
142 143 5.611796 TGATTTGAACGTCTTGAATGAGG 57.388 39.130 0.00 0.00 0.00 3.86
143 144 5.063204 TGATTTGAACGTCTTGAATGAGGT 58.937 37.500 0.00 0.00 36.74 3.85
144 145 6.227522 TGATTTGAACGTCTTGAATGAGGTA 58.772 36.000 0.00 0.00 34.50 3.08
145 146 6.708502 TGATTTGAACGTCTTGAATGAGGTAA 59.291 34.615 0.00 0.00 34.50 2.85
146 147 5.917541 TTGAACGTCTTGAATGAGGTAAC 57.082 39.130 0.00 0.00 34.50 2.50
147 148 4.951254 TGAACGTCTTGAATGAGGTAACA 58.049 39.130 0.00 0.00 41.41 2.41
148 149 5.361427 TGAACGTCTTGAATGAGGTAACAA 58.639 37.500 0.00 0.00 41.41 2.83
149 150 5.235616 TGAACGTCTTGAATGAGGTAACAAC 59.764 40.000 0.00 0.00 41.41 3.32
150 151 4.062991 ACGTCTTGAATGAGGTAACAACC 58.937 43.478 0.00 0.00 41.41 3.77
151 152 4.202326 ACGTCTTGAATGAGGTAACAACCT 60.202 41.667 0.00 0.00 44.06 3.50
161 162 4.756502 GAGGTAACAACCTCGAAATAGCT 58.243 43.478 8.72 0.00 45.70 3.32
162 163 5.161943 AGGTAACAACCTCGAAATAGCTT 57.838 39.130 0.00 0.00 34.41 3.74
163 164 6.290294 AGGTAACAACCTCGAAATAGCTTA 57.710 37.500 0.00 0.00 34.41 3.09
164 165 6.704310 AGGTAACAACCTCGAAATAGCTTAA 58.296 36.000 0.00 0.00 34.41 1.85
165 166 7.163441 AGGTAACAACCTCGAAATAGCTTAAA 58.837 34.615 0.00 0.00 34.41 1.52
166 167 7.662669 AGGTAACAACCTCGAAATAGCTTAAAA 59.337 33.333 0.00 0.00 34.41 1.52
167 168 7.961283 GGTAACAACCTCGAAATAGCTTAAAAG 59.039 37.037 0.00 0.00 0.00 2.27
168 169 6.496338 ACAACCTCGAAATAGCTTAAAAGG 57.504 37.500 0.00 0.00 0.00 3.11
169 170 6.235664 ACAACCTCGAAATAGCTTAAAAGGA 58.764 36.000 0.00 0.00 0.00 3.36
170 171 6.713450 ACAACCTCGAAATAGCTTAAAAGGAA 59.287 34.615 0.00 0.00 0.00 3.36
171 172 7.393515 ACAACCTCGAAATAGCTTAAAAGGAAT 59.606 33.333 0.00 0.00 0.00 3.01
172 173 8.889717 CAACCTCGAAATAGCTTAAAAGGAATA 58.110 33.333 0.00 0.00 0.00 1.75
173 174 9.457436 AACCTCGAAATAGCTTAAAAGGAATAA 57.543 29.630 0.00 0.00 0.00 1.40
174 175 9.457436 ACCTCGAAATAGCTTAAAAGGAATAAA 57.543 29.630 0.00 0.00 0.00 1.40
198 199 8.469309 AAAATGGAAACTTGAATCTTCTGAGA 57.531 30.769 0.00 0.00 36.09 3.27
199 200 8.647256 AAATGGAAACTTGAATCTTCTGAGAT 57.353 30.769 0.00 0.00 44.51 2.75
200 201 9.745018 AAATGGAAACTTGAATCTTCTGAGATA 57.255 29.630 0.00 0.00 41.78 1.98
201 202 9.917887 AATGGAAACTTGAATCTTCTGAGATAT 57.082 29.630 0.00 0.00 41.78 1.63
202 203 8.954950 TGGAAACTTGAATCTTCTGAGATATC 57.045 34.615 0.00 0.00 41.78 1.63
203 204 8.766476 TGGAAACTTGAATCTTCTGAGATATCT 58.234 33.333 4.47 4.47 41.78 1.98
204 205 9.612066 GGAAACTTGAATCTTCTGAGATATCTT 57.388 33.333 6.70 0.00 41.78 2.40
206 207 8.870160 AACTTGAATCTTCTGAGATATCTTCG 57.130 34.615 6.70 1.40 41.78 3.79
207 208 7.432869 ACTTGAATCTTCTGAGATATCTTCGG 58.567 38.462 6.70 5.78 41.78 4.30
208 209 5.777802 TGAATCTTCTGAGATATCTTCGGC 58.222 41.667 6.70 0.00 41.78 5.54
209 210 5.302823 TGAATCTTCTGAGATATCTTCGGCA 59.697 40.000 6.70 0.00 41.78 5.69
210 211 4.576216 TCTTCTGAGATATCTTCGGCAC 57.424 45.455 6.70 0.00 0.00 5.01
211 212 4.211125 TCTTCTGAGATATCTTCGGCACT 58.789 43.478 6.70 0.00 0.00 4.40
212 213 4.646945 TCTTCTGAGATATCTTCGGCACTT 59.353 41.667 6.70 0.00 0.00 3.16
213 214 4.576216 TCTGAGATATCTTCGGCACTTC 57.424 45.455 6.70 0.00 0.00 3.01
214 215 3.954258 TCTGAGATATCTTCGGCACTTCA 59.046 43.478 6.70 0.00 0.00 3.02
215 216 4.037327 TCTGAGATATCTTCGGCACTTCAG 59.963 45.833 6.70 6.59 0.00 3.02
216 217 3.954258 TGAGATATCTTCGGCACTTCAGA 59.046 43.478 6.70 0.00 0.00 3.27
217 218 4.402474 TGAGATATCTTCGGCACTTCAGAA 59.598 41.667 6.70 0.00 0.00 3.02
218 219 4.688021 AGATATCTTCGGCACTTCAGAAC 58.312 43.478 0.00 0.00 0.00 3.01
219 220 2.839486 ATCTTCGGCACTTCAGAACA 57.161 45.000 0.00 0.00 0.00 3.18
220 221 2.613026 TCTTCGGCACTTCAGAACAA 57.387 45.000 0.00 0.00 0.00 2.83
221 222 2.912771 TCTTCGGCACTTCAGAACAAA 58.087 42.857 0.00 0.00 0.00 2.83
222 223 3.275143 TCTTCGGCACTTCAGAACAAAA 58.725 40.909 0.00 0.00 0.00 2.44
223 224 3.692101 TCTTCGGCACTTCAGAACAAAAA 59.308 39.130 0.00 0.00 0.00 1.94
250 251 9.844257 AATAGGAAGAAGTGAATGATTAAGAGG 57.156 33.333 0.00 0.00 0.00 3.69
251 252 7.264294 AGGAAGAAGTGAATGATTAAGAGGT 57.736 36.000 0.00 0.00 0.00 3.85
252 253 7.108847 AGGAAGAAGTGAATGATTAAGAGGTG 58.891 38.462 0.00 0.00 0.00 4.00
253 254 6.183360 GGAAGAAGTGAATGATTAAGAGGTGC 60.183 42.308 0.00 0.00 0.00 5.01
254 255 5.809001 AGAAGTGAATGATTAAGAGGTGCA 58.191 37.500 0.00 0.00 0.00 4.57
255 256 5.645497 AGAAGTGAATGATTAAGAGGTGCAC 59.355 40.000 8.80 8.80 0.00 4.57
256 257 4.265073 AGTGAATGATTAAGAGGTGCACC 58.735 43.478 29.22 29.22 0.00 5.01
257 258 3.063997 GTGAATGATTAAGAGGTGCACCG 59.936 47.826 29.68 0.00 42.08 4.94
258 259 3.055458 TGAATGATTAAGAGGTGCACCGA 60.055 43.478 29.68 14.01 42.08 4.69
259 260 2.380084 TGATTAAGAGGTGCACCGAC 57.620 50.000 29.68 25.50 42.08 4.79
260 261 1.621317 TGATTAAGAGGTGCACCGACA 59.379 47.619 29.68 18.35 42.08 4.35
261 262 2.236146 TGATTAAGAGGTGCACCGACAT 59.764 45.455 29.68 21.43 42.08 3.06
262 263 2.093306 TTAAGAGGTGCACCGACATG 57.907 50.000 29.68 0.00 42.08 3.21
263 264 1.262417 TAAGAGGTGCACCGACATGA 58.738 50.000 29.68 11.82 42.08 3.07
264 265 0.036952 AAGAGGTGCACCGACATGAG 60.037 55.000 29.68 0.00 42.08 2.90
265 266 0.900182 AGAGGTGCACCGACATGAGA 60.900 55.000 29.68 0.00 42.08 3.27
266 267 0.037326 GAGGTGCACCGACATGAGAA 60.037 55.000 29.68 0.00 42.08 2.87
267 268 0.396435 AGGTGCACCGACATGAGAAA 59.604 50.000 29.68 0.00 42.08 2.52
268 269 0.798776 GGTGCACCGACATGAGAAAG 59.201 55.000 22.49 0.00 0.00 2.62
269 270 0.166814 GTGCACCGACATGAGAAAGC 59.833 55.000 5.22 0.00 0.00 3.51
270 271 0.250252 TGCACCGACATGAGAAAGCA 60.250 50.000 0.00 0.91 0.00 3.91
271 272 1.089920 GCACCGACATGAGAAAGCAT 58.910 50.000 0.00 0.00 0.00 3.79
272 273 1.470098 GCACCGACATGAGAAAGCATT 59.530 47.619 0.00 0.00 0.00 3.56
273 274 2.095059 GCACCGACATGAGAAAGCATTT 60.095 45.455 0.00 0.00 43.98 2.32
274 275 3.495193 CACCGACATGAGAAAGCATTTG 58.505 45.455 0.00 0.00 39.27 2.32
275 276 3.189080 CACCGACATGAGAAAGCATTTGA 59.811 43.478 0.00 0.00 39.27 2.69
276 277 3.820467 ACCGACATGAGAAAGCATTTGAA 59.180 39.130 0.00 0.00 39.27 2.69
277 278 4.278170 ACCGACATGAGAAAGCATTTGAAA 59.722 37.500 0.00 0.00 39.27 2.69
278 279 4.618489 CCGACATGAGAAAGCATTTGAAAC 59.382 41.667 0.00 0.00 39.27 2.78
279 280 5.214417 CGACATGAGAAAGCATTTGAAACA 58.786 37.500 0.00 0.00 39.27 2.83
280 281 5.686841 CGACATGAGAAAGCATTTGAAACAA 59.313 36.000 0.00 0.00 39.27 2.83
281 282 6.129273 CGACATGAGAAAGCATTTGAAACAAG 60.129 38.462 0.00 0.00 39.27 3.16
282 283 5.987347 ACATGAGAAAGCATTTGAAACAAGG 59.013 36.000 0.00 0.00 39.27 3.61
283 284 5.850557 TGAGAAAGCATTTGAAACAAGGA 57.149 34.783 0.00 0.00 39.27 3.36
284 285 6.219417 TGAGAAAGCATTTGAAACAAGGAA 57.781 33.333 0.00 0.00 39.27 3.36
285 286 6.638610 TGAGAAAGCATTTGAAACAAGGAAA 58.361 32.000 0.00 0.00 39.27 3.13
286 287 7.102346 TGAGAAAGCATTTGAAACAAGGAAAA 58.898 30.769 0.00 0.00 39.27 2.29
287 288 7.278424 TGAGAAAGCATTTGAAACAAGGAAAAG 59.722 33.333 0.00 0.00 39.27 2.27
288 289 7.330262 AGAAAGCATTTGAAACAAGGAAAAGA 58.670 30.769 0.00 0.00 39.27 2.52
289 290 7.989170 AGAAAGCATTTGAAACAAGGAAAAGAT 59.011 29.630 0.00 0.00 39.27 2.40
290 291 9.260002 GAAAGCATTTGAAACAAGGAAAAGATA 57.740 29.630 0.00 0.00 39.27 1.98
291 292 9.783081 AAAGCATTTGAAACAAGGAAAAGATAT 57.217 25.926 0.00 0.00 36.60 1.63
292 293 8.767478 AGCATTTGAAACAAGGAAAAGATATG 57.233 30.769 0.00 0.00 0.00 1.78
293 294 8.587608 AGCATTTGAAACAAGGAAAAGATATGA 58.412 29.630 0.00 0.00 0.00 2.15
294 295 9.374838 GCATTTGAAACAAGGAAAAGATATGAT 57.625 29.630 0.00 0.00 0.00 2.45
296 297 9.793252 ATTTGAAACAAGGAAAAGATATGATCG 57.207 29.630 0.00 0.00 0.00 3.69
297 298 8.560355 TTGAAACAAGGAAAAGATATGATCGA 57.440 30.769 0.00 0.00 0.00 3.59
298 299 7.974675 TGAAACAAGGAAAAGATATGATCGAC 58.025 34.615 0.00 0.00 0.00 4.20
299 300 7.606073 TGAAACAAGGAAAAGATATGATCGACA 59.394 33.333 0.00 0.00 0.00 4.35
300 301 7.921786 AACAAGGAAAAGATATGATCGACAA 57.078 32.000 0.00 0.00 0.00 3.18
301 302 7.921786 ACAAGGAAAAGATATGATCGACAAA 57.078 32.000 0.00 0.00 0.00 2.83
302 303 7.978982 ACAAGGAAAAGATATGATCGACAAAG 58.021 34.615 0.00 0.00 0.00 2.77
303 304 6.610741 AGGAAAAGATATGATCGACAAAGC 57.389 37.500 0.00 0.00 0.00 3.51
304 305 6.352516 AGGAAAAGATATGATCGACAAAGCT 58.647 36.000 0.00 0.00 0.00 3.74
305 306 6.825721 AGGAAAAGATATGATCGACAAAGCTT 59.174 34.615 0.00 0.00 0.00 3.74
306 307 6.909357 GGAAAAGATATGATCGACAAAGCTTG 59.091 38.462 0.00 0.00 0.00 4.01
307 308 7.201644 GGAAAAGATATGATCGACAAAGCTTGA 60.202 37.037 0.00 0.00 0.00 3.02
308 309 6.841443 AAGATATGATCGACAAAGCTTGAG 57.159 37.500 0.00 0.00 0.00 3.02
309 310 5.911752 AGATATGATCGACAAAGCTTGAGT 58.088 37.500 0.00 1.34 0.00 3.41
310 311 6.344500 AGATATGATCGACAAAGCTTGAGTT 58.656 36.000 0.00 0.00 0.00 3.01
311 312 4.675190 ATGATCGACAAAGCTTGAGTTG 57.325 40.909 0.00 6.47 0.00 3.16
312 313 3.727726 TGATCGACAAAGCTTGAGTTGA 58.272 40.909 19.12 19.12 0.00 3.18
313 314 4.126437 TGATCGACAAAGCTTGAGTTGAA 58.874 39.130 20.15 7.66 0.00 2.69
314 315 3.944422 TCGACAAAGCTTGAGTTGAAC 57.056 42.857 16.07 0.00 0.00 3.18
315 316 2.612212 TCGACAAAGCTTGAGTTGAACC 59.388 45.455 16.07 0.68 0.00 3.62
316 317 2.287009 CGACAAAGCTTGAGTTGAACCC 60.287 50.000 12.15 0.00 0.00 4.11
317 318 2.687935 GACAAAGCTTGAGTTGAACCCA 59.312 45.455 0.00 0.00 0.00 4.51
318 319 2.427095 ACAAAGCTTGAGTTGAACCCAC 59.573 45.455 0.00 0.00 0.00 4.61
319 320 1.692411 AAGCTTGAGTTGAACCCACC 58.308 50.000 0.00 0.00 0.00 4.61
320 321 0.550914 AGCTTGAGTTGAACCCACCA 59.449 50.000 0.00 0.00 0.00 4.17
321 322 1.064017 AGCTTGAGTTGAACCCACCAA 60.064 47.619 0.00 0.00 0.00 3.67
322 323 1.754226 GCTTGAGTTGAACCCACCAAA 59.246 47.619 0.00 0.00 0.00 3.28
323 324 2.223805 GCTTGAGTTGAACCCACCAAAG 60.224 50.000 0.00 0.00 0.00 2.77
324 325 3.287222 CTTGAGTTGAACCCACCAAAGA 58.713 45.455 0.00 0.00 0.00 2.52
325 326 3.374042 TGAGTTGAACCCACCAAAGAA 57.626 42.857 0.00 0.00 0.00 2.52
326 327 3.287222 TGAGTTGAACCCACCAAAGAAG 58.713 45.455 0.00 0.00 0.00 2.85
327 328 3.053991 TGAGTTGAACCCACCAAAGAAGA 60.054 43.478 0.00 0.00 0.00 2.87
328 329 3.951680 GAGTTGAACCCACCAAAGAAGAA 59.048 43.478 0.00 0.00 0.00 2.52
329 330 4.349365 AGTTGAACCCACCAAAGAAGAAA 58.651 39.130 0.00 0.00 0.00 2.52
330 331 4.775253 AGTTGAACCCACCAAAGAAGAAAA 59.225 37.500 0.00 0.00 0.00 2.29
331 332 5.105351 AGTTGAACCCACCAAAGAAGAAAAG 60.105 40.000 0.00 0.00 0.00 2.27
332 333 4.605183 TGAACCCACCAAAGAAGAAAAGA 58.395 39.130 0.00 0.00 0.00 2.52
333 334 4.644685 TGAACCCACCAAAGAAGAAAAGAG 59.355 41.667 0.00 0.00 0.00 2.85
334 335 4.519906 ACCCACCAAAGAAGAAAAGAGA 57.480 40.909 0.00 0.00 0.00 3.10
335 336 4.867086 ACCCACCAAAGAAGAAAAGAGAA 58.133 39.130 0.00 0.00 0.00 2.87
336 337 4.645136 ACCCACCAAAGAAGAAAAGAGAAC 59.355 41.667 0.00 0.00 0.00 3.01
337 338 4.261197 CCCACCAAAGAAGAAAAGAGAACG 60.261 45.833 0.00 0.00 0.00 3.95
338 339 4.261197 CCACCAAAGAAGAAAAGAGAACGG 60.261 45.833 0.00 0.00 0.00 4.44
339 340 4.574828 CACCAAAGAAGAAAAGAGAACGGA 59.425 41.667 0.00 0.00 0.00 4.69
340 341 4.816925 ACCAAAGAAGAAAAGAGAACGGAG 59.183 41.667 0.00 0.00 0.00 4.63
341 342 5.057149 CCAAAGAAGAAAAGAGAACGGAGA 58.943 41.667 0.00 0.00 0.00 3.71
342 343 5.527582 CCAAAGAAGAAAAGAGAACGGAGAA 59.472 40.000 0.00 0.00 0.00 2.87
343 344 6.205658 CCAAAGAAGAAAAGAGAACGGAGAAT 59.794 38.462 0.00 0.00 0.00 2.40
344 345 6.793492 AAGAAGAAAAGAGAACGGAGAATG 57.207 37.500 0.00 0.00 0.00 2.67
345 346 6.102897 AGAAGAAAAGAGAACGGAGAATGA 57.897 37.500 0.00 0.00 0.00 2.57
346 347 6.706295 AGAAGAAAAGAGAACGGAGAATGAT 58.294 36.000 0.00 0.00 0.00 2.45
347 348 7.841956 AGAAGAAAAGAGAACGGAGAATGATA 58.158 34.615 0.00 0.00 0.00 2.15
348 349 8.314751 AGAAGAAAAGAGAACGGAGAATGATAA 58.685 33.333 0.00 0.00 0.00 1.75
349 350 8.848474 AAGAAAAGAGAACGGAGAATGATAAA 57.152 30.769 0.00 0.00 0.00 1.40
350 351 8.257830 AGAAAAGAGAACGGAGAATGATAAAC 57.742 34.615 0.00 0.00 0.00 2.01
351 352 8.097662 AGAAAAGAGAACGGAGAATGATAAACT 58.902 33.333 0.00 0.00 0.00 2.66
352 353 8.622948 AAAAGAGAACGGAGAATGATAAACTT 57.377 30.769 0.00 0.00 0.00 2.66
353 354 7.602517 AAGAGAACGGAGAATGATAAACTTG 57.397 36.000 0.00 0.00 0.00 3.16
354 355 6.702329 AGAGAACGGAGAATGATAAACTTGT 58.298 36.000 0.00 0.00 0.00 3.16
355 356 7.837863 AGAGAACGGAGAATGATAAACTTGTA 58.162 34.615 0.00 0.00 0.00 2.41
356 357 7.976734 AGAGAACGGAGAATGATAAACTTGTAG 59.023 37.037 0.00 0.00 0.00 2.74
357 358 7.837863 AGAACGGAGAATGATAAACTTGTAGA 58.162 34.615 0.00 0.00 0.00 2.59
358 359 7.976734 AGAACGGAGAATGATAAACTTGTAGAG 59.023 37.037 0.00 0.00 0.00 2.43
359 360 6.043411 ACGGAGAATGATAAACTTGTAGAGC 58.957 40.000 0.00 0.00 0.00 4.09
360 361 6.042777 CGGAGAATGATAAACTTGTAGAGCA 58.957 40.000 0.00 0.00 0.00 4.26
361 362 6.703607 CGGAGAATGATAAACTTGTAGAGCAT 59.296 38.462 0.00 0.00 0.00 3.79
362 363 7.095857 CGGAGAATGATAAACTTGTAGAGCATC 60.096 40.741 0.00 0.00 0.00 3.91
382 383 0.327924 TTCATGAGAACCACCGGCAT 59.672 50.000 0.00 0.00 0.00 4.40
385 386 0.179000 ATGAGAACCACCGGCATCTC 59.821 55.000 15.61 15.61 38.59 2.75
421 423 9.528489 GTTTTATTTATCCATAGATTGCCCCTA 57.472 33.333 0.00 0.00 33.67 3.53
426 428 3.874316 TCCATAGATTGCCCCTATGTCT 58.126 45.455 12.88 0.00 40.97 3.41
430 432 0.475906 GATTGCCCCTATGTCTGGCT 59.524 55.000 0.00 0.00 45.56 4.75
442 444 1.075374 TGTCTGGCTAGCCCATTTTGT 59.925 47.619 30.81 0.00 44.33 2.83
444 446 2.562738 GTCTGGCTAGCCCATTTTGTTT 59.437 45.455 30.81 0.00 44.33 2.83
459 461 3.039588 TTTCGCGTGGCTCGTTCC 61.040 61.111 5.77 0.00 42.13 3.62
495 497 1.586422 CCTCGCACATTATGACCTGG 58.414 55.000 0.00 0.00 0.00 4.45
496 498 1.138859 CCTCGCACATTATGACCTGGA 59.861 52.381 0.00 0.00 0.00 3.86
497 499 2.477825 CTCGCACATTATGACCTGGAG 58.522 52.381 0.00 0.00 0.00 3.86
498 500 1.831106 TCGCACATTATGACCTGGAGT 59.169 47.619 0.00 0.00 0.00 3.85
499 501 3.028130 TCGCACATTATGACCTGGAGTA 58.972 45.455 0.00 0.00 0.00 2.59
500 502 3.068165 TCGCACATTATGACCTGGAGTAG 59.932 47.826 0.00 0.00 0.00 2.57
536 538 0.378257 CGCTCCATGATGAAAACCGG 59.622 55.000 0.00 0.00 0.00 5.28
551 553 1.144057 CCGGGTTAGCTGCTCGATT 59.856 57.895 4.91 0.00 0.00 3.34
567 569 5.040635 GCTCGATTCAAAGAAAACCAACAA 58.959 37.500 0.00 0.00 0.00 2.83
594 596 9.158233 CGGTTCTAACAGATTCTTAAAATGGTA 57.842 33.333 0.00 0.00 0.00 3.25
831 2774 5.164954 CGGTAGAGAAAAGAACAGAGAAGG 58.835 45.833 0.00 0.00 0.00 3.46
838 2781 0.523966 AGAACAGAGAAGGACGAGCG 59.476 55.000 0.00 0.00 0.00 5.03
857 2801 3.063045 AGCGAGAAACGAAAGAAAAACGT 59.937 39.130 0.00 0.00 45.77 3.99
858 2802 4.268405 AGCGAGAAACGAAAGAAAAACGTA 59.732 37.500 0.00 0.00 45.77 3.57
865 2809 2.726681 CGAAAGAAAAACGTATGGGCCG 60.727 50.000 0.00 0.00 0.00 6.13
882 2826 1.388065 CCGGCCCAAAAAGTCACACA 61.388 55.000 0.00 0.00 0.00 3.72
885 2829 0.104120 GCCCAAAAAGTCACACACCC 59.896 55.000 0.00 0.00 0.00 4.61
886 2830 0.750249 CCCAAAAAGTCACACACCCC 59.250 55.000 0.00 0.00 0.00 4.95
887 2831 1.687996 CCCAAAAAGTCACACACCCCT 60.688 52.381 0.00 0.00 0.00 4.79
888 2832 2.423660 CCCAAAAAGTCACACACCCCTA 60.424 50.000 0.00 0.00 0.00 3.53
904 2848 2.484065 CCCCTACGTGATTTATGCGGAA 60.484 50.000 0.00 0.00 0.00 4.30
922 2866 3.553096 CGGAACATAGGAGATTCCTTCCG 60.553 52.174 16.96 16.96 46.91 4.30
927 2871 2.375345 GGAGATTCCTTCCGCCCCA 61.375 63.158 0.00 0.00 32.53 4.96
966 2910 2.758737 CCGCCTCCGAACCTAGGT 60.759 66.667 9.21 9.21 35.16 3.08
1089 3033 1.593265 CACCTACACCCCGTACCAC 59.407 63.158 0.00 0.00 0.00 4.16
1115 3059 1.450312 GCCTCAACCTCCCATCGTG 60.450 63.158 0.00 0.00 0.00 4.35
1589 3533 0.460811 CGTACCCCGCCCTTCTAAAC 60.461 60.000 0.00 0.00 0.00 2.01
1654 3598 6.351117 GGAGTTAGCAGTAGTGGTATTTCAGT 60.351 42.308 10.17 0.00 36.54 3.41
1655 3599 7.005709 AGTTAGCAGTAGTGGTATTTCAGTT 57.994 36.000 10.17 0.00 36.54 3.16
1656 3600 7.450903 AGTTAGCAGTAGTGGTATTTCAGTTT 58.549 34.615 10.17 0.00 36.54 2.66
1657 3601 7.937394 AGTTAGCAGTAGTGGTATTTCAGTTTT 59.063 33.333 10.17 0.00 36.54 2.43
1658 3602 6.803154 AGCAGTAGTGGTATTTCAGTTTTC 57.197 37.500 0.00 0.00 30.68 2.29
1659 3603 6.296026 AGCAGTAGTGGTATTTCAGTTTTCA 58.704 36.000 0.00 0.00 30.68 2.69
1660 3604 6.428159 AGCAGTAGTGGTATTTCAGTTTTCAG 59.572 38.462 0.00 0.00 30.68 3.02
1769 3713 3.932710 TGTCGAATTAGCTCAACATGGAC 59.067 43.478 0.00 0.00 0.00 4.02
1773 3717 4.571984 CGAATTAGCTCAACATGGACATGA 59.428 41.667 18.38 0.00 41.20 3.07
1806 3750 5.850557 TTGCCTTTTGTCTGAATCTTCAA 57.149 34.783 0.00 0.00 36.64 2.69
1818 3767 8.733458 TGTCTGAATCTTCAAAATCTGTTATGG 58.267 33.333 0.00 0.00 36.64 2.74
1822 3771 9.246670 TGAATCTTCAAAATCTGTTATGGTGAT 57.753 29.630 0.00 0.00 33.55 3.06
1828 3778 5.920193 AAATCTGTTATGGTGATTGGTGG 57.080 39.130 0.00 0.00 31.70 4.61
1842 3792 3.364460 TTGGTGGTGCTATGTTGCTAT 57.636 42.857 0.00 0.00 0.00 2.97
1873 3823 8.899427 ACTATGGATTACTTCAATGTGAGATG 57.101 34.615 0.00 0.00 0.00 2.90
1946 3909 3.517296 TTTGGGTGCTAATGGAAGTGA 57.483 42.857 0.00 0.00 0.00 3.41
1947 3910 3.737559 TTGGGTGCTAATGGAAGTGAT 57.262 42.857 0.00 0.00 0.00 3.06
1948 3911 3.281727 TGGGTGCTAATGGAAGTGATC 57.718 47.619 0.00 0.00 0.00 2.92
1949 3912 2.213499 GGGTGCTAATGGAAGTGATCG 58.787 52.381 0.00 0.00 0.00 3.69
1950 3913 2.158957 GGGTGCTAATGGAAGTGATCGA 60.159 50.000 0.00 0.00 0.00 3.59
1951 3914 3.495100 GGGTGCTAATGGAAGTGATCGAT 60.495 47.826 0.00 0.00 0.00 3.59
1952 3915 4.130118 GGTGCTAATGGAAGTGATCGATT 58.870 43.478 0.00 0.00 39.47 3.34
1953 3916 4.024556 GGTGCTAATGGAAGTGATCGATTG 60.025 45.833 0.00 0.00 37.12 2.67
1954 3917 4.024556 GTGCTAATGGAAGTGATCGATTGG 60.025 45.833 0.00 0.00 37.12 3.16
1955 3918 4.739046 CTAATGGAAGTGATCGATTGGC 57.261 45.455 0.00 0.00 37.12 4.52
1956 3919 1.586422 ATGGAAGTGATCGATTGGCG 58.414 50.000 0.00 0.00 42.69 5.69
1957 3920 0.249120 TGGAAGTGATCGATTGGCGT 59.751 50.000 0.00 0.00 41.80 5.68
1958 3921 0.652592 GGAAGTGATCGATTGGCGTG 59.347 55.000 0.00 0.00 41.80 5.34
1959 3922 1.359848 GAAGTGATCGATTGGCGTGT 58.640 50.000 0.00 0.00 41.80 4.49
1960 3923 1.061131 GAAGTGATCGATTGGCGTGTG 59.939 52.381 0.00 0.00 41.80 3.82
2115 4078 2.549992 CCTAGGCGCCAGTTGCATTATA 60.550 50.000 31.54 6.89 41.33 0.98
2161 4124 4.859304 ACTGAATTGCTGCAAGATTTGA 57.141 36.364 20.72 3.86 34.07 2.69
2257 4221 5.157781 TGTTCTTTGTTTGGTTTCTTCGTG 58.842 37.500 0.00 0.00 0.00 4.35
2278 4242 3.253230 GTGATGCATTTTGGTTGCTACC 58.747 45.455 10.70 10.70 45.26 3.18
2356 4320 3.290308 TGTTCAGTGTTGTTTGCGTTT 57.710 38.095 0.00 0.00 0.00 3.60
2377 4341 6.470235 CGTTTAATTTGATCCTCATGTTGCTC 59.530 38.462 0.00 0.00 0.00 4.26
2378 4342 7.542025 GTTTAATTTGATCCTCATGTTGCTCT 58.458 34.615 0.00 0.00 0.00 4.09
2386 4350 3.817084 TCCTCATGTTGCTCTTCTTTGTG 59.183 43.478 0.00 0.00 0.00 3.33
2395 4359 4.973168 TGCTCTTCTTTGTGTGGATAACT 58.027 39.130 0.00 0.00 0.00 2.24
2399 4363 6.566753 GCTCTTCTTTGTGTGGATAACTTGTC 60.567 42.308 0.00 0.00 0.00 3.18
2400 4364 5.763204 TCTTCTTTGTGTGGATAACTTGTCC 59.237 40.000 0.00 0.00 36.26 4.02
2401 4365 5.042463 TCTTTGTGTGGATAACTTGTCCA 57.958 39.130 3.19 3.19 43.26 4.02
2415 4379 9.559958 GATAACTTGTCCAAATATCAACTGTTG 57.440 33.333 14.24 14.24 0.00 3.33
2443 4407 0.107848 TTTACTCTTGCCTAGGCGCC 60.108 55.000 28.28 21.89 45.51 6.53
2444 4408 1.261938 TTACTCTTGCCTAGGCGCCA 61.262 55.000 31.54 14.00 45.51 5.69
2452 4416 1.750399 CCTAGGCGCCAGTTGCATT 60.750 57.895 31.54 7.63 41.33 3.56
2465 4429 4.442332 CCAGTTGCATTATGCCATCAATGT 60.442 41.667 15.06 0.00 44.23 2.71
2495 4459 5.647589 CAAGACATACTGAATTGCTGCAAT 58.352 37.500 21.48 21.48 35.39 3.56
2514 4478 7.914346 GCTGCAATATTTGGATATTAGCTCATC 59.086 37.037 0.00 0.00 37.11 2.92
2515 4479 9.175312 CTGCAATATTTGGATATTAGCTCATCT 57.825 33.333 0.00 0.00 36.53 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.068008 CGACTCTTCTAATTTTCTCAGAGTTAC 57.932 37.037 0.00 0.00 40.82 2.50
3 4 8.244802 CCGACTCTTCTAATTTTCTCAGAGTTA 58.755 37.037 0.00 0.00 40.82 2.24
4 5 7.093992 CCGACTCTTCTAATTTTCTCAGAGTT 58.906 38.462 0.00 0.00 40.82 3.01
5 6 6.350612 CCCGACTCTTCTAATTTTCTCAGAGT 60.351 42.308 0.00 0.00 42.90 3.24
6 7 6.039616 CCCGACTCTTCTAATTTTCTCAGAG 58.960 44.000 0.00 0.00 35.00 3.35
7 8 5.480772 ACCCGACTCTTCTAATTTTCTCAGA 59.519 40.000 0.00 0.00 0.00 3.27
8 9 5.725362 ACCCGACTCTTCTAATTTTCTCAG 58.275 41.667 0.00 0.00 0.00 3.35
9 10 5.740290 ACCCGACTCTTCTAATTTTCTCA 57.260 39.130 0.00 0.00 0.00 3.27
10 11 8.543862 TTTTACCCGACTCTTCTAATTTTCTC 57.456 34.615 0.00 0.00 0.00 2.87
11 12 9.163899 GATTTTACCCGACTCTTCTAATTTTCT 57.836 33.333 0.00 0.00 0.00 2.52
12 13 8.396390 GGATTTTACCCGACTCTTCTAATTTTC 58.604 37.037 0.00 0.00 0.00 2.29
13 14 8.107729 AGGATTTTACCCGACTCTTCTAATTTT 58.892 33.333 0.00 0.00 0.00 1.82
14 15 7.553044 CAGGATTTTACCCGACTCTTCTAATTT 59.447 37.037 0.00 0.00 0.00 1.82
15 16 7.048512 CAGGATTTTACCCGACTCTTCTAATT 58.951 38.462 0.00 0.00 0.00 1.40
16 17 6.408206 CCAGGATTTTACCCGACTCTTCTAAT 60.408 42.308 0.00 0.00 0.00 1.73
17 18 5.105064 CCAGGATTTTACCCGACTCTTCTAA 60.105 44.000 0.00 0.00 0.00 2.10
18 19 4.404715 CCAGGATTTTACCCGACTCTTCTA 59.595 45.833 0.00 0.00 0.00 2.10
19 20 3.197983 CCAGGATTTTACCCGACTCTTCT 59.802 47.826 0.00 0.00 0.00 2.85
20 21 3.532542 CCAGGATTTTACCCGACTCTTC 58.467 50.000 0.00 0.00 0.00 2.87
21 22 2.238898 CCCAGGATTTTACCCGACTCTT 59.761 50.000 0.00 0.00 0.00 2.85
22 23 1.838077 CCCAGGATTTTACCCGACTCT 59.162 52.381 0.00 0.00 0.00 3.24
23 24 1.835531 TCCCAGGATTTTACCCGACTC 59.164 52.381 0.00 0.00 0.00 3.36
24 25 1.961133 TCCCAGGATTTTACCCGACT 58.039 50.000 0.00 0.00 0.00 4.18
25 26 2.793288 TTCCCAGGATTTTACCCGAC 57.207 50.000 0.00 0.00 0.00 4.79
26 27 3.331294 TCTTTTCCCAGGATTTTACCCGA 59.669 43.478 0.00 0.00 0.00 5.14
27 28 3.442625 GTCTTTTCCCAGGATTTTACCCG 59.557 47.826 0.00 0.00 0.00 5.28
28 29 3.767673 GGTCTTTTCCCAGGATTTTACCC 59.232 47.826 0.00 0.00 0.00 3.69
29 30 4.462834 CAGGTCTTTTCCCAGGATTTTACC 59.537 45.833 0.00 0.00 0.00 2.85
30 31 5.048013 CACAGGTCTTTTCCCAGGATTTTAC 60.048 44.000 0.00 0.00 0.00 2.01
31 32 5.076873 CACAGGTCTTTTCCCAGGATTTTA 58.923 41.667 0.00 0.00 0.00 1.52
32 33 3.897505 CACAGGTCTTTTCCCAGGATTTT 59.102 43.478 0.00 0.00 0.00 1.82
33 34 3.500343 CACAGGTCTTTTCCCAGGATTT 58.500 45.455 0.00 0.00 0.00 2.17
34 35 2.225117 CCACAGGTCTTTTCCCAGGATT 60.225 50.000 0.00 0.00 0.00 3.01
35 36 1.355720 CCACAGGTCTTTTCCCAGGAT 59.644 52.381 0.00 0.00 0.00 3.24
36 37 0.771127 CCACAGGTCTTTTCCCAGGA 59.229 55.000 0.00 0.00 0.00 3.86
37 38 0.251341 CCCACAGGTCTTTTCCCAGG 60.251 60.000 0.00 0.00 0.00 4.45
38 39 0.478507 ACCCACAGGTCTTTTCCCAG 59.521 55.000 0.00 0.00 46.45 4.45
39 40 2.640473 ACCCACAGGTCTTTTCCCA 58.360 52.632 0.00 0.00 46.45 4.37
55 56 1.074889 TCTTTTGAGTGGGCCCTAACC 59.925 52.381 25.70 10.17 0.00 2.85
56 57 2.579410 TCTTTTGAGTGGGCCCTAAC 57.421 50.000 25.70 14.47 0.00 2.34
57 58 3.227614 GTTTCTTTTGAGTGGGCCCTAA 58.772 45.455 25.70 10.27 0.00 2.69
58 59 2.175931 TGTTTCTTTTGAGTGGGCCCTA 59.824 45.455 25.70 6.58 0.00 3.53
59 60 1.063266 TGTTTCTTTTGAGTGGGCCCT 60.063 47.619 25.70 2.15 0.00 5.19
60 61 1.068588 GTGTTTCTTTTGAGTGGGCCC 59.931 52.381 17.59 17.59 0.00 5.80
61 62 1.068588 GGTGTTTCTTTTGAGTGGGCC 59.931 52.381 0.00 0.00 0.00 5.80
62 63 1.269051 CGGTGTTTCTTTTGAGTGGGC 60.269 52.381 0.00 0.00 0.00 5.36
63 64 2.021457 ACGGTGTTTCTTTTGAGTGGG 58.979 47.619 0.00 0.00 0.00 4.61
64 65 3.434637 CAACGGTGTTTCTTTTGAGTGG 58.565 45.455 0.00 0.00 0.00 4.00
65 66 3.127895 TCCAACGGTGTTTCTTTTGAGTG 59.872 43.478 0.00 0.00 0.00 3.51
66 67 3.349022 TCCAACGGTGTTTCTTTTGAGT 58.651 40.909 0.00 0.00 0.00 3.41
67 68 4.364415 TTCCAACGGTGTTTCTTTTGAG 57.636 40.909 0.00 0.00 0.00 3.02
68 69 4.785511 TTTCCAACGGTGTTTCTTTTGA 57.214 36.364 0.00 0.00 0.00 2.69
69 70 5.105752 TCATTTCCAACGGTGTTTCTTTTG 58.894 37.500 0.00 0.00 0.00 2.44
70 71 5.331876 TCATTTCCAACGGTGTTTCTTTT 57.668 34.783 0.00 0.00 0.00 2.27
71 72 4.993029 TCATTTCCAACGGTGTTTCTTT 57.007 36.364 0.00 0.00 0.00 2.52
72 73 5.288804 CAATCATTTCCAACGGTGTTTCTT 58.711 37.500 0.00 0.00 0.00 2.52
73 74 4.795962 GCAATCATTTCCAACGGTGTTTCT 60.796 41.667 0.00 0.00 0.00 2.52
74 75 3.428534 GCAATCATTTCCAACGGTGTTTC 59.571 43.478 0.00 0.00 0.00 2.78
75 76 3.069443 AGCAATCATTTCCAACGGTGTTT 59.931 39.130 0.00 0.00 0.00 2.83
76 77 2.627699 AGCAATCATTTCCAACGGTGTT 59.372 40.909 0.00 0.00 0.00 3.32
77 78 2.238521 AGCAATCATTTCCAACGGTGT 58.761 42.857 0.00 0.00 0.00 4.16
78 79 3.302365 AAGCAATCATTTCCAACGGTG 57.698 42.857 0.00 0.00 0.00 4.94
79 80 3.443681 CCTAAGCAATCATTTCCAACGGT 59.556 43.478 0.00 0.00 0.00 4.83
80 81 3.694072 TCCTAAGCAATCATTTCCAACGG 59.306 43.478 0.00 0.00 0.00 4.44
81 82 4.963276 TCCTAAGCAATCATTTCCAACG 57.037 40.909 0.00 0.00 0.00 4.10
82 83 6.375455 TCTCTTCCTAAGCAATCATTTCCAAC 59.625 38.462 0.00 0.00 0.00 3.77
83 84 6.484288 TCTCTTCCTAAGCAATCATTTCCAA 58.516 36.000 0.00 0.00 0.00 3.53
84 85 6.065976 TCTCTTCCTAAGCAATCATTTCCA 57.934 37.500 0.00 0.00 0.00 3.53
85 86 6.769822 TCATCTCTTCCTAAGCAATCATTTCC 59.230 38.462 0.00 0.00 0.00 3.13
86 87 7.798596 TCATCTCTTCCTAAGCAATCATTTC 57.201 36.000 0.00 0.00 0.00 2.17
87 88 7.255520 GCATCATCTCTTCCTAAGCAATCATTT 60.256 37.037 0.00 0.00 0.00 2.32
88 89 6.207025 GCATCATCTCTTCCTAAGCAATCATT 59.793 38.462 0.00 0.00 0.00 2.57
89 90 5.706369 GCATCATCTCTTCCTAAGCAATCAT 59.294 40.000 0.00 0.00 0.00 2.45
90 91 5.061853 GCATCATCTCTTCCTAAGCAATCA 58.938 41.667 0.00 0.00 0.00 2.57
91 92 5.049543 GTGCATCATCTCTTCCTAAGCAATC 60.050 44.000 0.00 0.00 0.00 2.67
92 93 4.820716 GTGCATCATCTCTTCCTAAGCAAT 59.179 41.667 0.00 0.00 0.00 3.56
93 94 4.194640 GTGCATCATCTCTTCCTAAGCAA 58.805 43.478 0.00 0.00 0.00 3.91
94 95 3.432749 GGTGCATCATCTCTTCCTAAGCA 60.433 47.826 0.00 0.00 0.00 3.91
95 96 3.137533 GGTGCATCATCTCTTCCTAAGC 58.862 50.000 0.00 0.00 0.00 3.09
96 97 3.388308 CGGTGCATCATCTCTTCCTAAG 58.612 50.000 0.00 0.00 0.00 2.18
97 98 2.103094 CCGGTGCATCATCTCTTCCTAA 59.897 50.000 0.00 0.00 0.00 2.69
98 99 1.688735 CCGGTGCATCATCTCTTCCTA 59.311 52.381 0.00 0.00 0.00 2.94
99 100 0.467384 CCGGTGCATCATCTCTTCCT 59.533 55.000 0.00 0.00 0.00 3.36
100 101 0.179000 ACCGGTGCATCATCTCTTCC 59.821 55.000 6.12 0.00 0.00 3.46
101 102 1.667724 CAACCGGTGCATCATCTCTTC 59.332 52.381 8.52 0.00 0.00 2.87
102 103 1.278985 TCAACCGGTGCATCATCTCTT 59.721 47.619 8.52 0.00 0.00 2.85
103 104 0.904649 TCAACCGGTGCATCATCTCT 59.095 50.000 8.52 0.00 0.00 3.10
104 105 1.959042 ATCAACCGGTGCATCATCTC 58.041 50.000 8.52 0.00 0.00 2.75
105 106 2.424601 CAAATCAACCGGTGCATCATCT 59.575 45.455 8.52 0.00 0.00 2.90
106 107 2.423185 TCAAATCAACCGGTGCATCATC 59.577 45.455 8.52 0.00 0.00 2.92
107 108 2.445427 TCAAATCAACCGGTGCATCAT 58.555 42.857 8.52 0.00 0.00 2.45
108 109 1.902938 TCAAATCAACCGGTGCATCA 58.097 45.000 8.52 0.00 0.00 3.07
109 110 2.595386 GTTCAAATCAACCGGTGCATC 58.405 47.619 8.52 0.00 0.00 3.91
110 111 1.068610 CGTTCAAATCAACCGGTGCAT 60.069 47.619 8.52 0.00 0.00 3.96
111 112 0.309302 CGTTCAAATCAACCGGTGCA 59.691 50.000 8.52 0.00 0.00 4.57
112 113 0.309612 ACGTTCAAATCAACCGGTGC 59.690 50.000 8.52 0.00 0.00 5.01
113 114 1.871039 AGACGTTCAAATCAACCGGTG 59.129 47.619 8.52 2.16 0.00 4.94
114 115 2.249844 AGACGTTCAAATCAACCGGT 57.750 45.000 0.00 0.00 0.00 5.28
115 116 2.546368 TCAAGACGTTCAAATCAACCGG 59.454 45.455 0.00 0.00 0.00 5.28
116 117 3.870723 TCAAGACGTTCAAATCAACCG 57.129 42.857 0.00 0.00 0.00 4.44
117 118 5.757886 TCATTCAAGACGTTCAAATCAACC 58.242 37.500 0.00 0.00 0.00 3.77
118 119 5.853282 CCTCATTCAAGACGTTCAAATCAAC 59.147 40.000 0.00 0.00 0.00 3.18
119 120 5.530915 ACCTCATTCAAGACGTTCAAATCAA 59.469 36.000 0.00 0.00 0.00 2.57
120 121 5.063204 ACCTCATTCAAGACGTTCAAATCA 58.937 37.500 0.00 0.00 0.00 2.57
121 122 5.613358 ACCTCATTCAAGACGTTCAAATC 57.387 39.130 0.00 0.00 0.00 2.17
122 123 6.485313 TGTTACCTCATTCAAGACGTTCAAAT 59.515 34.615 0.00 0.00 0.00 2.32
123 124 5.818336 TGTTACCTCATTCAAGACGTTCAAA 59.182 36.000 0.00 0.00 0.00 2.69
124 125 5.361427 TGTTACCTCATTCAAGACGTTCAA 58.639 37.500 0.00 0.00 0.00 2.69
125 126 4.951254 TGTTACCTCATTCAAGACGTTCA 58.049 39.130 0.00 0.00 0.00 3.18
126 127 5.333875 GGTTGTTACCTCATTCAAGACGTTC 60.334 44.000 0.00 0.00 41.53 3.95
127 128 4.514066 GGTTGTTACCTCATTCAAGACGTT 59.486 41.667 0.00 0.00 41.53 3.99
128 129 4.062991 GGTTGTTACCTCATTCAAGACGT 58.937 43.478 0.00 0.00 41.53 4.34
129 130 4.663636 GGTTGTTACCTCATTCAAGACG 57.336 45.455 0.00 0.00 41.53 4.18
141 142 6.973229 TTAAGCTATTTCGAGGTTGTTACC 57.027 37.500 0.00 0.00 45.39 2.85
142 143 7.961283 CCTTTTAAGCTATTTCGAGGTTGTTAC 59.039 37.037 0.00 0.00 37.69 2.50
143 144 7.879160 TCCTTTTAAGCTATTTCGAGGTTGTTA 59.121 33.333 0.00 0.00 37.69 2.41
144 145 6.713450 TCCTTTTAAGCTATTTCGAGGTTGTT 59.287 34.615 0.00 0.00 37.69 2.83
145 146 6.235664 TCCTTTTAAGCTATTTCGAGGTTGT 58.764 36.000 0.00 0.00 37.69 3.32
146 147 6.737254 TCCTTTTAAGCTATTTCGAGGTTG 57.263 37.500 0.00 0.00 37.69 3.77
147 148 7.939784 ATTCCTTTTAAGCTATTTCGAGGTT 57.060 32.000 0.00 0.00 40.22 3.50
148 149 9.457436 TTTATTCCTTTTAAGCTATTTCGAGGT 57.543 29.630 0.00 0.00 0.00 3.85
172 173 8.917088 TCTCAGAAGATTCAAGTTTCCATTTTT 58.083 29.630 0.00 0.00 0.00 1.94
173 174 8.469309 TCTCAGAAGATTCAAGTTTCCATTTT 57.531 30.769 0.00 0.00 0.00 1.82
174 175 8.647256 ATCTCAGAAGATTCAAGTTTCCATTT 57.353 30.769 0.00 0.00 39.27 2.32
175 176 9.917887 ATATCTCAGAAGATTCAAGTTTCCATT 57.082 29.630 0.00 0.00 42.39 3.16
176 177 9.558396 GATATCTCAGAAGATTCAAGTTTCCAT 57.442 33.333 0.00 0.00 42.39 3.41
177 178 8.766476 AGATATCTCAGAAGATTCAAGTTTCCA 58.234 33.333 0.00 0.00 42.39 3.53
178 179 9.612066 AAGATATCTCAGAAGATTCAAGTTTCC 57.388 33.333 5.51 0.00 42.39 3.13
180 181 9.311916 CGAAGATATCTCAGAAGATTCAAGTTT 57.688 33.333 5.51 0.00 42.39 2.66
181 182 7.925483 CCGAAGATATCTCAGAAGATTCAAGTT 59.075 37.037 5.51 0.00 42.39 2.66
182 183 7.432869 CCGAAGATATCTCAGAAGATTCAAGT 58.567 38.462 5.51 0.00 42.39 3.16
183 184 6.365789 GCCGAAGATATCTCAGAAGATTCAAG 59.634 42.308 5.51 0.00 42.39 3.02
184 185 6.183360 TGCCGAAGATATCTCAGAAGATTCAA 60.183 38.462 5.51 0.00 42.39 2.69
185 186 5.302823 TGCCGAAGATATCTCAGAAGATTCA 59.697 40.000 5.51 0.00 42.39 2.57
186 187 5.633182 GTGCCGAAGATATCTCAGAAGATTC 59.367 44.000 5.51 0.00 42.39 2.52
187 188 5.304101 AGTGCCGAAGATATCTCAGAAGATT 59.696 40.000 5.51 0.00 42.39 2.40
188 189 4.832266 AGTGCCGAAGATATCTCAGAAGAT 59.168 41.667 5.51 0.00 44.57 2.40
189 190 4.211125 AGTGCCGAAGATATCTCAGAAGA 58.789 43.478 5.51 0.00 35.54 2.87
190 191 4.582701 AGTGCCGAAGATATCTCAGAAG 57.417 45.455 5.51 0.00 0.00 2.85
191 192 4.402474 TGAAGTGCCGAAGATATCTCAGAA 59.598 41.667 5.51 0.00 0.00 3.02
192 193 3.954258 TGAAGTGCCGAAGATATCTCAGA 59.046 43.478 5.51 0.00 0.00 3.27
193 194 4.037327 TCTGAAGTGCCGAAGATATCTCAG 59.963 45.833 5.51 6.14 0.00 3.35
194 195 3.954258 TCTGAAGTGCCGAAGATATCTCA 59.046 43.478 5.51 0.00 0.00 3.27
195 196 4.576216 TCTGAAGTGCCGAAGATATCTC 57.424 45.455 5.51 0.00 0.00 2.75
196 197 4.160439 TGTTCTGAAGTGCCGAAGATATCT 59.840 41.667 0.00 0.00 0.00 1.98
197 198 4.433615 TGTTCTGAAGTGCCGAAGATATC 58.566 43.478 0.00 0.00 0.00 1.63
198 199 4.471904 TGTTCTGAAGTGCCGAAGATAT 57.528 40.909 0.00 0.00 0.00 1.63
199 200 3.953712 TGTTCTGAAGTGCCGAAGATA 57.046 42.857 0.00 0.00 0.00 1.98
200 201 2.839486 TGTTCTGAAGTGCCGAAGAT 57.161 45.000 0.00 0.00 0.00 2.40
201 202 2.613026 TTGTTCTGAAGTGCCGAAGA 57.387 45.000 0.00 0.00 0.00 2.87
202 203 3.691049 TTTTGTTCTGAAGTGCCGAAG 57.309 42.857 0.00 0.00 0.00 3.79
224 225 9.844257 CCTCTTAATCATTCACTTCTTCCTATT 57.156 33.333 0.00 0.00 0.00 1.73
225 226 8.997734 ACCTCTTAATCATTCACTTCTTCCTAT 58.002 33.333 0.00 0.00 0.00 2.57
226 227 8.260818 CACCTCTTAATCATTCACTTCTTCCTA 58.739 37.037 0.00 0.00 0.00 2.94
227 228 7.108847 CACCTCTTAATCATTCACTTCTTCCT 58.891 38.462 0.00 0.00 0.00 3.36
228 229 6.183360 GCACCTCTTAATCATTCACTTCTTCC 60.183 42.308 0.00 0.00 0.00 3.46
229 230 6.372659 TGCACCTCTTAATCATTCACTTCTTC 59.627 38.462 0.00 0.00 0.00 2.87
230 231 6.150140 GTGCACCTCTTAATCATTCACTTCTT 59.850 38.462 5.22 0.00 0.00 2.52
231 232 5.645497 GTGCACCTCTTAATCATTCACTTCT 59.355 40.000 5.22 0.00 0.00 2.85
232 233 5.163713 GGTGCACCTCTTAATCATTCACTTC 60.164 44.000 29.12 0.00 0.00 3.01
233 234 4.702131 GGTGCACCTCTTAATCATTCACTT 59.298 41.667 29.12 0.00 0.00 3.16
234 235 4.265073 GGTGCACCTCTTAATCATTCACT 58.735 43.478 29.12 0.00 0.00 3.41
235 236 3.063997 CGGTGCACCTCTTAATCATTCAC 59.936 47.826 32.28 1.40 0.00 3.18
236 237 3.055458 TCGGTGCACCTCTTAATCATTCA 60.055 43.478 32.28 0.00 0.00 2.57
237 238 3.309954 GTCGGTGCACCTCTTAATCATTC 59.690 47.826 32.28 2.54 0.00 2.67
238 239 3.270877 GTCGGTGCACCTCTTAATCATT 58.729 45.455 32.28 0.00 0.00 2.57
239 240 2.236146 TGTCGGTGCACCTCTTAATCAT 59.764 45.455 32.28 0.00 0.00 2.45
240 241 1.621317 TGTCGGTGCACCTCTTAATCA 59.379 47.619 32.28 16.72 0.00 2.57
241 242 2.380084 TGTCGGTGCACCTCTTAATC 57.620 50.000 32.28 14.59 0.00 1.75
242 243 2.236146 TCATGTCGGTGCACCTCTTAAT 59.764 45.455 32.28 15.86 0.00 1.40
243 244 1.621317 TCATGTCGGTGCACCTCTTAA 59.379 47.619 32.28 14.31 0.00 1.85
244 245 1.204704 CTCATGTCGGTGCACCTCTTA 59.795 52.381 32.28 16.61 0.00 2.10
245 246 0.036952 CTCATGTCGGTGCACCTCTT 60.037 55.000 32.28 19.39 0.00 2.85
246 247 0.900182 TCTCATGTCGGTGCACCTCT 60.900 55.000 32.28 12.00 0.00 3.69
247 248 0.037326 TTCTCATGTCGGTGCACCTC 60.037 55.000 32.28 24.01 0.00 3.85
248 249 0.396435 TTTCTCATGTCGGTGCACCT 59.604 50.000 32.28 12.19 0.00 4.00
249 250 0.798776 CTTTCTCATGTCGGTGCACC 59.201 55.000 26.78 26.78 0.00 5.01
250 251 0.166814 GCTTTCTCATGTCGGTGCAC 59.833 55.000 8.80 8.80 0.00 4.57
251 252 0.250252 TGCTTTCTCATGTCGGTGCA 60.250 50.000 0.00 0.00 0.00 4.57
252 253 1.089920 ATGCTTTCTCATGTCGGTGC 58.910 50.000 0.00 0.00 0.00 5.01
253 254 3.189080 TCAAATGCTTTCTCATGTCGGTG 59.811 43.478 0.00 0.00 0.00 4.94
254 255 3.411446 TCAAATGCTTTCTCATGTCGGT 58.589 40.909 0.00 0.00 0.00 4.69
255 256 4.424061 TTCAAATGCTTTCTCATGTCGG 57.576 40.909 0.00 0.00 0.00 4.79
256 257 5.214417 TGTTTCAAATGCTTTCTCATGTCG 58.786 37.500 0.00 0.00 0.00 4.35
257 258 6.145048 CCTTGTTTCAAATGCTTTCTCATGTC 59.855 38.462 0.00 0.00 0.00 3.06
258 259 5.987347 CCTTGTTTCAAATGCTTTCTCATGT 59.013 36.000 0.00 0.00 0.00 3.21
259 260 6.218019 TCCTTGTTTCAAATGCTTTCTCATG 58.782 36.000 0.00 0.00 0.00 3.07
260 261 6.409524 TCCTTGTTTCAAATGCTTTCTCAT 57.590 33.333 0.00 0.00 0.00 2.90
261 262 5.850557 TCCTTGTTTCAAATGCTTTCTCA 57.149 34.783 0.00 0.00 0.00 3.27
262 263 7.492344 TCTTTTCCTTGTTTCAAATGCTTTCTC 59.508 33.333 0.00 0.00 0.00 2.87
263 264 7.330262 TCTTTTCCTTGTTTCAAATGCTTTCT 58.670 30.769 0.00 0.00 0.00 2.52
264 265 7.538303 TCTTTTCCTTGTTTCAAATGCTTTC 57.462 32.000 0.00 0.00 0.00 2.62
265 266 9.783081 ATATCTTTTCCTTGTTTCAAATGCTTT 57.217 25.926 0.00 0.00 0.00 3.51
266 267 9.211485 CATATCTTTTCCTTGTTTCAAATGCTT 57.789 29.630 0.00 0.00 0.00 3.91
267 268 8.587608 TCATATCTTTTCCTTGTTTCAAATGCT 58.412 29.630 0.00 0.00 0.00 3.79
268 269 8.761575 TCATATCTTTTCCTTGTTTCAAATGC 57.238 30.769 0.00 0.00 0.00 3.56
270 271 9.793252 CGATCATATCTTTTCCTTGTTTCAAAT 57.207 29.630 0.00 0.00 0.00 2.32
271 272 9.008965 TCGATCATATCTTTTCCTTGTTTCAAA 57.991 29.630 0.00 0.00 0.00 2.69
272 273 8.450964 GTCGATCATATCTTTTCCTTGTTTCAA 58.549 33.333 0.00 0.00 0.00 2.69
273 274 7.606073 TGTCGATCATATCTTTTCCTTGTTTCA 59.394 33.333 0.00 0.00 0.00 2.69
274 275 7.974675 TGTCGATCATATCTTTTCCTTGTTTC 58.025 34.615 0.00 0.00 0.00 2.78
275 276 7.921786 TGTCGATCATATCTTTTCCTTGTTT 57.078 32.000 0.00 0.00 0.00 2.83
276 277 7.921786 TTGTCGATCATATCTTTTCCTTGTT 57.078 32.000 0.00 0.00 0.00 2.83
277 278 7.414540 GCTTTGTCGATCATATCTTTTCCTTGT 60.415 37.037 0.00 0.00 0.00 3.16
278 279 6.909357 GCTTTGTCGATCATATCTTTTCCTTG 59.091 38.462 0.00 0.00 0.00 3.61
279 280 6.825721 AGCTTTGTCGATCATATCTTTTCCTT 59.174 34.615 0.00 0.00 0.00 3.36
280 281 6.352516 AGCTTTGTCGATCATATCTTTTCCT 58.647 36.000 0.00 0.00 0.00 3.36
281 282 6.610741 AGCTTTGTCGATCATATCTTTTCC 57.389 37.500 0.00 0.00 0.00 3.13
282 283 7.688372 TCAAGCTTTGTCGATCATATCTTTTC 58.312 34.615 0.00 0.00 0.00 2.29
283 284 7.335422 ACTCAAGCTTTGTCGATCATATCTTTT 59.665 33.333 0.00 0.00 0.00 2.27
284 285 6.820656 ACTCAAGCTTTGTCGATCATATCTTT 59.179 34.615 0.00 0.00 0.00 2.52
285 286 6.344500 ACTCAAGCTTTGTCGATCATATCTT 58.656 36.000 0.00 0.00 0.00 2.40
286 287 5.911752 ACTCAAGCTTTGTCGATCATATCT 58.088 37.500 0.00 0.00 0.00 1.98
287 288 6.256539 TCAACTCAAGCTTTGTCGATCATATC 59.743 38.462 0.00 0.00 0.00 1.63
288 289 6.108687 TCAACTCAAGCTTTGTCGATCATAT 58.891 36.000 0.00 0.00 0.00 1.78
289 290 5.478407 TCAACTCAAGCTTTGTCGATCATA 58.522 37.500 0.00 0.00 0.00 2.15
290 291 4.318332 TCAACTCAAGCTTTGTCGATCAT 58.682 39.130 0.00 0.00 0.00 2.45
291 292 3.727726 TCAACTCAAGCTTTGTCGATCA 58.272 40.909 0.00 0.00 0.00 2.92
292 293 4.458708 GTTCAACTCAAGCTTTGTCGATC 58.541 43.478 0.00 0.00 0.00 3.69
293 294 3.251004 GGTTCAACTCAAGCTTTGTCGAT 59.749 43.478 0.00 0.00 0.00 3.59
294 295 2.612212 GGTTCAACTCAAGCTTTGTCGA 59.388 45.455 0.00 0.00 0.00 4.20
295 296 2.287009 GGGTTCAACTCAAGCTTTGTCG 60.287 50.000 0.00 0.00 0.00 4.35
296 297 2.687935 TGGGTTCAACTCAAGCTTTGTC 59.312 45.455 0.00 0.00 0.00 3.18
297 298 2.427095 GTGGGTTCAACTCAAGCTTTGT 59.573 45.455 0.00 0.00 25.28 2.83
298 299 2.223805 GGTGGGTTCAACTCAAGCTTTG 60.224 50.000 0.00 0.00 25.28 2.77
299 300 2.031870 GGTGGGTTCAACTCAAGCTTT 58.968 47.619 0.00 0.00 25.28 3.51
300 301 1.064017 TGGTGGGTTCAACTCAAGCTT 60.064 47.619 0.00 0.00 25.28 3.74
301 302 0.550914 TGGTGGGTTCAACTCAAGCT 59.449 50.000 0.00 0.00 25.28 3.74
302 303 1.398692 TTGGTGGGTTCAACTCAAGC 58.601 50.000 0.00 0.00 25.28 4.01
303 304 3.287222 TCTTTGGTGGGTTCAACTCAAG 58.713 45.455 0.00 0.00 25.28 3.02
304 305 3.374042 TCTTTGGTGGGTTCAACTCAA 57.626 42.857 0.00 0.00 25.28 3.02
305 306 3.053991 TCTTCTTTGGTGGGTTCAACTCA 60.054 43.478 0.00 0.00 0.00 3.41
306 307 3.551846 TCTTCTTTGGTGGGTTCAACTC 58.448 45.455 0.00 0.00 0.00 3.01
307 308 3.662759 TCTTCTTTGGTGGGTTCAACT 57.337 42.857 0.00 0.00 0.00 3.16
308 309 4.729227 TTTCTTCTTTGGTGGGTTCAAC 57.271 40.909 0.00 0.00 0.00 3.18
309 310 5.020132 TCTTTTCTTCTTTGGTGGGTTCAA 58.980 37.500 0.00 0.00 0.00 2.69
310 311 4.605183 TCTTTTCTTCTTTGGTGGGTTCA 58.395 39.130 0.00 0.00 0.00 3.18
311 312 4.887655 TCTCTTTTCTTCTTTGGTGGGTTC 59.112 41.667 0.00 0.00 0.00 3.62
312 313 4.867086 TCTCTTTTCTTCTTTGGTGGGTT 58.133 39.130 0.00 0.00 0.00 4.11
313 314 4.519906 TCTCTTTTCTTCTTTGGTGGGT 57.480 40.909 0.00 0.00 0.00 4.51
314 315 4.261197 CGTTCTCTTTTCTTCTTTGGTGGG 60.261 45.833 0.00 0.00 0.00 4.61
315 316 4.261197 CCGTTCTCTTTTCTTCTTTGGTGG 60.261 45.833 0.00 0.00 0.00 4.61
316 317 4.574828 TCCGTTCTCTTTTCTTCTTTGGTG 59.425 41.667 0.00 0.00 0.00 4.17
317 318 4.777463 TCCGTTCTCTTTTCTTCTTTGGT 58.223 39.130 0.00 0.00 0.00 3.67
318 319 5.057149 TCTCCGTTCTCTTTTCTTCTTTGG 58.943 41.667 0.00 0.00 0.00 3.28
319 320 6.604735 TTCTCCGTTCTCTTTTCTTCTTTG 57.395 37.500 0.00 0.00 0.00 2.77
320 321 6.992715 TCATTCTCCGTTCTCTTTTCTTCTTT 59.007 34.615 0.00 0.00 0.00 2.52
321 322 6.525629 TCATTCTCCGTTCTCTTTTCTTCTT 58.474 36.000 0.00 0.00 0.00 2.52
322 323 6.102897 TCATTCTCCGTTCTCTTTTCTTCT 57.897 37.500 0.00 0.00 0.00 2.85
323 324 6.976636 ATCATTCTCCGTTCTCTTTTCTTC 57.023 37.500 0.00 0.00 0.00 2.87
324 325 8.722394 GTTTATCATTCTCCGTTCTCTTTTCTT 58.278 33.333 0.00 0.00 0.00 2.52
325 326 8.097662 AGTTTATCATTCTCCGTTCTCTTTTCT 58.902 33.333 0.00 0.00 0.00 2.52
326 327 8.257830 AGTTTATCATTCTCCGTTCTCTTTTC 57.742 34.615 0.00 0.00 0.00 2.29
327 328 8.507249 CAAGTTTATCATTCTCCGTTCTCTTTT 58.493 33.333 0.00 0.00 0.00 2.27
328 329 7.661847 ACAAGTTTATCATTCTCCGTTCTCTTT 59.338 33.333 0.00 0.00 0.00 2.52
329 330 7.162082 ACAAGTTTATCATTCTCCGTTCTCTT 58.838 34.615 0.00 0.00 0.00 2.85
330 331 6.702329 ACAAGTTTATCATTCTCCGTTCTCT 58.298 36.000 0.00 0.00 0.00 3.10
331 332 6.969828 ACAAGTTTATCATTCTCCGTTCTC 57.030 37.500 0.00 0.00 0.00 2.87
332 333 7.837863 TCTACAAGTTTATCATTCTCCGTTCT 58.162 34.615 0.00 0.00 0.00 3.01
333 334 7.254151 GCTCTACAAGTTTATCATTCTCCGTTC 60.254 40.741 0.00 0.00 0.00 3.95
334 335 6.535508 GCTCTACAAGTTTATCATTCTCCGTT 59.464 38.462 0.00 0.00 0.00 4.44
335 336 6.043411 GCTCTACAAGTTTATCATTCTCCGT 58.957 40.000 0.00 0.00 0.00 4.69
336 337 6.042777 TGCTCTACAAGTTTATCATTCTCCG 58.957 40.000 0.00 0.00 0.00 4.63
337 338 7.930865 AGATGCTCTACAAGTTTATCATTCTCC 59.069 37.037 0.00 0.00 0.00 3.71
338 339 8.885494 AGATGCTCTACAAGTTTATCATTCTC 57.115 34.615 0.00 0.00 0.00 2.87
339 340 9.323985 GAAGATGCTCTACAAGTTTATCATTCT 57.676 33.333 0.00 0.00 0.00 2.40
340 341 9.102757 TGAAGATGCTCTACAAGTTTATCATTC 57.897 33.333 0.00 0.00 0.00 2.67
341 342 9.624373 ATGAAGATGCTCTACAAGTTTATCATT 57.376 29.630 0.00 0.00 0.00 2.57
342 343 9.053840 CATGAAGATGCTCTACAAGTTTATCAT 57.946 33.333 0.00 0.00 0.00 2.45
343 344 8.260114 TCATGAAGATGCTCTACAAGTTTATCA 58.740 33.333 0.00 0.00 0.00 2.15
344 345 8.654230 TCATGAAGATGCTCTACAAGTTTATC 57.346 34.615 0.00 0.00 0.00 1.75
345 346 8.481314 TCTCATGAAGATGCTCTACAAGTTTAT 58.519 33.333 0.00 0.00 0.00 1.40
346 347 7.840931 TCTCATGAAGATGCTCTACAAGTTTA 58.159 34.615 0.00 0.00 0.00 2.01
347 348 6.705302 TCTCATGAAGATGCTCTACAAGTTT 58.295 36.000 0.00 0.00 0.00 2.66
348 349 6.291648 TCTCATGAAGATGCTCTACAAGTT 57.708 37.500 0.00 0.00 0.00 2.66
349 350 5.929058 TCTCATGAAGATGCTCTACAAGT 57.071 39.130 0.00 0.00 0.00 3.16
350 351 5.523188 GGTTCTCATGAAGATGCTCTACAAG 59.477 44.000 0.00 0.00 32.82 3.16
351 352 5.046376 TGGTTCTCATGAAGATGCTCTACAA 60.046 40.000 0.00 0.00 32.82 2.41
352 353 4.467438 TGGTTCTCATGAAGATGCTCTACA 59.533 41.667 0.00 0.00 32.82 2.74
353 354 4.808364 GTGGTTCTCATGAAGATGCTCTAC 59.192 45.833 0.00 0.00 32.82 2.59
354 355 4.141846 GGTGGTTCTCATGAAGATGCTCTA 60.142 45.833 0.00 0.00 32.82 2.43
355 356 3.370315 GGTGGTTCTCATGAAGATGCTCT 60.370 47.826 0.00 0.00 32.82 4.09
356 357 2.941720 GGTGGTTCTCATGAAGATGCTC 59.058 50.000 0.00 0.00 32.82 4.26
357 358 2.679059 CGGTGGTTCTCATGAAGATGCT 60.679 50.000 0.00 0.00 32.82 3.79
358 359 1.667724 CGGTGGTTCTCATGAAGATGC 59.332 52.381 0.00 0.00 32.82 3.91
359 360 2.283298 CCGGTGGTTCTCATGAAGATG 58.717 52.381 0.00 0.00 32.82 2.90
360 361 1.407437 GCCGGTGGTTCTCATGAAGAT 60.407 52.381 1.90 0.00 32.82 2.40
361 362 0.036388 GCCGGTGGTTCTCATGAAGA 60.036 55.000 1.90 0.00 32.15 2.87
362 363 0.321564 TGCCGGTGGTTCTCATGAAG 60.322 55.000 1.90 0.00 32.15 3.02
363 364 0.327924 ATGCCGGTGGTTCTCATGAA 59.672 50.000 1.90 0.00 0.00 2.57
364 365 0.107703 GATGCCGGTGGTTCTCATGA 60.108 55.000 1.90 0.00 0.00 3.07
365 366 0.107508 AGATGCCGGTGGTTCTCATG 60.108 55.000 1.90 0.00 0.00 3.07
366 367 0.179000 GAGATGCCGGTGGTTCTCAT 59.821 55.000 1.90 0.00 35.60 2.90
367 368 1.596934 GAGATGCCGGTGGTTCTCA 59.403 57.895 1.90 0.00 35.60 3.27
368 369 1.153349 GGAGATGCCGGTGGTTCTC 60.153 63.158 1.90 9.67 35.14 2.87
369 370 0.325296 TAGGAGATGCCGGTGGTTCT 60.325 55.000 1.90 0.00 43.43 3.01
370 371 0.759346 ATAGGAGATGCCGGTGGTTC 59.241 55.000 1.90 0.00 43.43 3.62
371 372 1.141053 GAATAGGAGATGCCGGTGGTT 59.859 52.381 1.90 0.00 43.43 3.67
372 373 0.759346 GAATAGGAGATGCCGGTGGT 59.241 55.000 1.90 0.00 43.43 4.16
373 374 1.051812 AGAATAGGAGATGCCGGTGG 58.948 55.000 1.90 0.00 43.43 4.61
374 375 3.259374 ACATAGAATAGGAGATGCCGGTG 59.741 47.826 1.90 0.00 43.43 4.94
375 376 3.511477 ACATAGAATAGGAGATGCCGGT 58.489 45.455 1.90 0.00 43.43 5.28
405 406 3.584406 CAGACATAGGGGCAATCTATGGA 59.416 47.826 18.89 0.00 44.92 3.41
421 423 2.291800 ACAAAATGGGCTAGCCAGACAT 60.292 45.455 34.09 24.29 37.98 3.06
426 428 1.543802 CGAAACAAAATGGGCTAGCCA 59.456 47.619 34.09 20.63 37.98 4.75
430 432 1.068885 CACGCGAAACAAAATGGGCTA 60.069 47.619 15.93 0.00 0.00 3.93
442 444 3.039588 GGAACGAGCCACGCGAAA 61.040 61.111 15.93 0.00 46.94 3.46
459 461 0.611896 AGGCGGTTTTCCAATGGAGG 60.612 55.000 0.86 0.00 40.70 4.30
495 497 6.745907 AGCGAACAACAAAAGTTTTTCTACTC 59.254 34.615 0.00 0.00 0.00 2.59
496 498 6.617879 AGCGAACAACAAAAGTTTTTCTACT 58.382 32.000 0.00 1.76 0.00 2.57
497 499 6.020916 GGAGCGAACAACAAAAGTTTTTCTAC 60.021 38.462 0.00 0.00 0.00 2.59
498 500 6.031471 GGAGCGAACAACAAAAGTTTTTCTA 58.969 36.000 0.00 0.00 0.00 2.10
499 501 4.862574 GGAGCGAACAACAAAAGTTTTTCT 59.137 37.500 0.00 0.00 0.00 2.52
500 502 4.623595 TGGAGCGAACAACAAAAGTTTTTC 59.376 37.500 0.00 0.00 0.00 2.29
536 538 3.262420 TCTTTGAATCGAGCAGCTAACC 58.738 45.455 0.00 0.00 0.00 2.85
567 569 7.664318 ACCATTTTAAGAATCTGTTAGAACCGT 59.336 33.333 0.00 0.00 0.00 4.83
793 2736 9.974980 TTTTCTCTACCGCTTTTGATAATTTTT 57.025 25.926 0.00 0.00 0.00 1.94
798 2741 7.442969 TGTTCTTTTCTCTACCGCTTTTGATAA 59.557 33.333 0.00 0.00 0.00 1.75
799 2742 6.932400 TGTTCTTTTCTCTACCGCTTTTGATA 59.068 34.615 0.00 0.00 0.00 2.15
802 2745 5.236478 TCTGTTCTTTTCTCTACCGCTTTTG 59.764 40.000 0.00 0.00 0.00 2.44
805 2748 4.281182 TCTCTGTTCTTTTCTCTACCGCTT 59.719 41.667 0.00 0.00 0.00 4.68
831 2774 1.682982 TCTTTCGTTTCTCGCTCGTC 58.317 50.000 0.00 0.00 39.67 4.20
838 2781 5.849604 CCCATACGTTTTTCTTTCGTTTCTC 59.150 40.000 0.00 0.00 38.69 2.87
865 2809 0.104120 GGTGTGTGACTTTTTGGGCC 59.896 55.000 0.00 0.00 0.00 5.80
871 2815 1.487558 ACGTAGGGGTGTGTGACTTTT 59.512 47.619 0.00 0.00 0.00 2.27
882 2826 1.202604 CCGCATAAATCACGTAGGGGT 60.203 52.381 0.00 0.00 0.00 4.95
885 2829 3.191669 TGTTCCGCATAAATCACGTAGG 58.808 45.455 0.00 0.00 0.00 3.18
886 2830 5.118664 CCTATGTTCCGCATAAATCACGTAG 59.881 44.000 0.00 0.00 39.36 3.51
887 2831 4.986034 CCTATGTTCCGCATAAATCACGTA 59.014 41.667 0.00 0.00 39.36 3.57
888 2832 3.807622 CCTATGTTCCGCATAAATCACGT 59.192 43.478 0.00 0.00 39.36 4.49
927 2871 2.030562 CTTCCCGTGCTCGTGGTT 59.969 61.111 7.47 0.00 35.01 3.67
966 2910 3.723922 GGGCGCTGGGGTTTAGGA 61.724 66.667 7.64 0.00 0.00 2.94
1089 3033 2.674220 GAGGTTGAGGCCCTCAGGG 61.674 68.421 14.22 4.83 46.46 4.45
1115 3059 2.654404 GGTCGTAGATCGTGCGGC 60.654 66.667 0.00 0.00 40.67 6.53
1120 3064 1.450848 TCGGCAGGTCGTAGATCGT 60.451 57.895 0.00 0.00 46.28 3.73
1152 3096 0.336737 GGGTCTCCTCAGGGAAGAGA 59.663 60.000 0.00 0.00 41.69 3.10
1161 3105 2.997315 CAGGTGCGGGTCTCCTCA 60.997 66.667 0.00 0.00 36.59 3.86
1589 3533 1.471684 ACTTACTAACGAGTGCTCCGG 59.528 52.381 0.00 0.00 36.28 5.14
1654 3598 7.918076 ACCACTATAAGATCTTCACCTGAAAA 58.082 34.615 12.24 0.00 33.07 2.29
1655 3599 7.496346 ACCACTATAAGATCTTCACCTGAAA 57.504 36.000 12.24 0.00 33.07 2.69
1656 3600 7.496346 AACCACTATAAGATCTTCACCTGAA 57.504 36.000 12.24 0.00 0.00 3.02
1657 3601 8.783660 ATAACCACTATAAGATCTTCACCTGA 57.216 34.615 12.24 0.00 0.00 3.86
1769 3713 9.294030 GACAAAAGGCAATAACTTCTAATCATG 57.706 33.333 0.00 0.00 0.00 3.07
1773 3717 8.635765 TCAGACAAAAGGCAATAACTTCTAAT 57.364 30.769 0.00 0.00 0.00 1.73
1806 3750 5.185635 CACCACCAATCACCATAACAGATTT 59.814 40.000 0.00 0.00 30.04 2.17
1818 3767 2.415893 GCAACATAGCACCACCAATCAC 60.416 50.000 0.00 0.00 0.00 3.06
1822 3771 2.869101 TAGCAACATAGCACCACCAA 57.131 45.000 0.00 0.00 36.85 3.67
1828 3778 8.499162 CCATAGTCTAAAATAGCAACATAGCAC 58.501 37.037 0.00 0.00 36.85 4.40
1873 3823 7.919091 AGATCATGACATAATTTTGCATCACAC 59.081 33.333 0.00 0.00 0.00 3.82
1911 3861 4.353737 CACCCAAAATGCATCATACGAAG 58.646 43.478 0.00 0.00 0.00 3.79
1946 3909 1.361668 GCAGACACACGCCAATCGAT 61.362 55.000 0.00 0.00 41.67 3.59
1947 3910 2.027073 GCAGACACACGCCAATCGA 61.027 57.895 0.00 0.00 41.67 3.59
1948 3911 2.476051 GCAGACACACGCCAATCG 59.524 61.111 0.00 0.00 45.38 3.34
1954 3917 4.996434 AGCCAGGCAGACACACGC 62.996 66.667 15.80 0.00 0.00 5.34
1955 3918 2.434658 TACAGCCAGGCAGACACACG 62.435 60.000 15.80 0.00 0.00 4.49
1956 3919 0.036010 ATACAGCCAGGCAGACACAC 60.036 55.000 15.80 0.00 0.00 3.82
1957 3920 0.692476 AATACAGCCAGGCAGACACA 59.308 50.000 15.80 0.00 0.00 3.72
1958 3921 1.089920 CAATACAGCCAGGCAGACAC 58.910 55.000 15.80 0.00 0.00 3.67
1959 3922 0.692476 ACAATACAGCCAGGCAGACA 59.308 50.000 15.80 0.00 0.00 3.41
1960 3923 1.826385 AACAATACAGCCAGGCAGAC 58.174 50.000 15.80 0.00 0.00 3.51
2115 4078 2.173519 CTTGCCTTGGACATTGATGGT 58.826 47.619 0.00 0.00 0.00 3.55
2257 4221 3.253230 GGTAGCAACCAAAATGCATCAC 58.747 45.455 0.00 0.00 46.22 3.06
2278 4242 1.660607 CACACCAATCGATCACTTCCG 59.339 52.381 0.00 0.00 0.00 4.30
2377 4341 5.530915 TGGACAAGTTATCCACACAAAGAAG 59.469 40.000 0.00 0.00 41.47 2.85
2378 4342 5.441500 TGGACAAGTTATCCACACAAAGAA 58.558 37.500 0.00 0.00 41.47 2.52
2386 4350 8.184192 CAGTTGATATTTGGACAAGTTATCCAC 58.816 37.037 1.26 0.00 46.09 4.02
2395 4359 8.050778 GGATACAACAGTTGATATTTGGACAA 57.949 34.615 20.56 0.00 0.00 3.18
2415 4379 6.049790 CCTAGGCAAGAGTAAAACTGGATAC 58.950 44.000 0.00 0.00 0.00 2.24
2452 4416 2.309613 GCCTTGGACATTGATGGCATA 58.690 47.619 0.00 0.00 37.62 3.14
2465 4429 4.574674 ATTCAGTATGTCTTGCCTTGGA 57.425 40.909 0.00 0.00 37.40 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.