Multiple sequence alignment - TraesCS2A01G399500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G399500 chr2A 100.000 2657 0 0 1 2657 652572052 652569396 0.000000e+00 4907
1 TraesCS2A01G399500 chr2D 90.964 1162 67 23 794 1949 508064217 508063088 0.000000e+00 1530
2 TraesCS2A01G399500 chr2D 85.574 714 99 4 1947 2657 626507341 626506629 0.000000e+00 745
3 TraesCS2A01G399500 chr2B 88.889 1035 50 13 782 1793 597003137 597002145 0.000000e+00 1214
4 TraesCS2A01G399500 chr2B 83.403 717 107 11 1950 2657 412788784 412788071 0.000000e+00 654
5 TraesCS2A01G399500 chr2B 91.146 192 13 1 11 202 597010219 597010032 9.440000e-65 257
6 TraesCS2A01G399500 chr2B 88.525 183 15 5 201 383 597003345 597003169 1.600000e-52 217
7 TraesCS2A01G399500 chr2B 85.350 157 12 4 1793 1949 597002083 597001938 4.580000e-33 152
8 TraesCS2A01G399500 chr3A 90.210 715 60 9 1948 2657 510688022 510687313 0.000000e+00 924
9 TraesCS2A01G399500 chr3A 87.466 367 45 1 413 778 298151293 298150927 3.160000e-114 422
10 TraesCS2A01G399500 chr7A 89.708 719 65 4 1947 2656 711406241 711406959 0.000000e+00 909
11 TraesCS2A01G399500 chr7A 87.671 365 43 2 415 778 50238705 50238342 8.790000e-115 424
12 TraesCS2A01G399500 chr5A 88.640 713 77 1 1948 2656 465299191 465299903 0.000000e+00 865
13 TraesCS2A01G399500 chr5A 88.276 725 71 11 1943 2657 463760242 463760962 0.000000e+00 856
14 TraesCS2A01G399500 chr5A 85.874 715 90 10 1948 2657 591644895 591644187 0.000000e+00 750
15 TraesCS2A01G399500 chr5A 86.968 376 46 3 404 778 524224283 524223910 1.140000e-113 420
16 TraesCS2A01G399500 chr5A 86.957 368 47 1 412 778 554673668 554674035 1.900000e-111 412
17 TraesCS2A01G399500 chr3B 88.343 712 78 3 1950 2656 101429535 101430246 0.000000e+00 850
18 TraesCS2A01G399500 chr4B 86.255 713 94 4 1948 2657 69425732 69425021 0.000000e+00 771
19 TraesCS2A01G399500 chr1B 85.994 714 96 3 1947 2657 152849964 152849252 0.000000e+00 761
20 TraesCS2A01G399500 chr7D 88.736 364 39 2 416 778 503325840 503325478 6.750000e-121 444
21 TraesCS2A01G399500 chr7D 87.363 364 43 3 416 778 321494681 321495042 5.290000e-112 414
22 TraesCS2A01G399500 chr5D 88.011 367 42 2 413 778 482550149 482550514 1.460000e-117 433
23 TraesCS2A01G399500 chr1D 87.534 369 38 5 416 778 318126991 318126625 1.140000e-113 420
24 TraesCS2A01G399500 chr7B 86.792 371 46 3 409 778 328491464 328491096 6.850000e-111 411


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G399500 chr2A 652569396 652572052 2656 True 4907.000000 4907 100.000 1 2657 1 chr2A.!!$R1 2656
1 TraesCS2A01G399500 chr2D 508063088 508064217 1129 True 1530.000000 1530 90.964 794 1949 1 chr2D.!!$R1 1155
2 TraesCS2A01G399500 chr2D 626506629 626507341 712 True 745.000000 745 85.574 1947 2657 1 chr2D.!!$R2 710
3 TraesCS2A01G399500 chr2B 412788071 412788784 713 True 654.000000 654 83.403 1950 2657 1 chr2B.!!$R1 707
4 TraesCS2A01G399500 chr2B 597001938 597003345 1407 True 527.666667 1214 87.588 201 1949 3 chr2B.!!$R3 1748
5 TraesCS2A01G399500 chr3A 510687313 510688022 709 True 924.000000 924 90.210 1948 2657 1 chr3A.!!$R2 709
6 TraesCS2A01G399500 chr7A 711406241 711406959 718 False 909.000000 909 89.708 1947 2656 1 chr7A.!!$F1 709
7 TraesCS2A01G399500 chr5A 465299191 465299903 712 False 865.000000 865 88.640 1948 2656 1 chr5A.!!$F2 708
8 TraesCS2A01G399500 chr5A 463760242 463760962 720 False 856.000000 856 88.276 1943 2657 1 chr5A.!!$F1 714
9 TraesCS2A01G399500 chr5A 591644187 591644895 708 True 750.000000 750 85.874 1948 2657 1 chr5A.!!$R2 709
10 TraesCS2A01G399500 chr3B 101429535 101430246 711 False 850.000000 850 88.343 1950 2656 1 chr3B.!!$F1 706
11 TraesCS2A01G399500 chr4B 69425021 69425732 711 True 771.000000 771 86.255 1948 2657 1 chr4B.!!$R1 709
12 TraesCS2A01G399500 chr1B 152849252 152849964 712 True 761.000000 761 85.994 1947 2657 1 chr1B.!!$R1 710

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
662 679 0.036388 AAGCCACATACCGTGTCTGG 60.036 55.0 0.0 0.0 44.78 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2414 2541 0.109342 CACCTGTTCTGGAACTGCCT 59.891 55.0 13.54 0.74 41.67 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.431771 TCATGGCGACCGTCGTTG 60.432 61.111 21.37 15.93 42.81 4.10
18 19 2.736995 CATGGCGACCGTCGTTGT 60.737 61.111 21.37 5.65 42.81 3.32
19 20 2.431942 ATGGCGACCGTCGTTGTC 60.432 61.111 21.37 9.96 42.81 3.18
24 25 2.641559 GACCGTCGTTGTCGTCCT 59.358 61.111 0.00 0.00 38.33 3.85
25 26 1.441682 GACCGTCGTTGTCGTCCTC 60.442 63.158 0.00 0.00 38.33 3.71
26 27 2.121564 GACCGTCGTTGTCGTCCTCA 62.122 60.000 0.00 0.00 38.33 3.86
27 28 1.008194 CCGTCGTTGTCGTCCTCAA 60.008 57.895 0.00 0.00 38.33 3.02
28 29 1.273455 CCGTCGTTGTCGTCCTCAAC 61.273 60.000 0.00 0.00 40.89 3.18
29 30 0.317603 CGTCGTTGTCGTCCTCAACT 60.318 55.000 7.10 0.00 41.76 3.16
30 31 1.129326 GTCGTTGTCGTCCTCAACTG 58.871 55.000 7.10 2.29 41.76 3.16
31 32 1.026584 TCGTTGTCGTCCTCAACTGA 58.973 50.000 7.10 4.15 41.76 3.41
32 33 1.406180 TCGTTGTCGTCCTCAACTGAA 59.594 47.619 7.10 0.00 41.76 3.02
33 34 2.159212 TCGTTGTCGTCCTCAACTGAAA 60.159 45.455 7.10 0.00 41.76 2.69
34 35 2.605818 CGTTGTCGTCCTCAACTGAAAA 59.394 45.455 7.10 0.00 41.76 2.29
35 36 3.543460 CGTTGTCGTCCTCAACTGAAAAC 60.543 47.826 7.10 0.00 41.76 2.43
36 37 2.557317 TGTCGTCCTCAACTGAAAACC 58.443 47.619 0.00 0.00 0.00 3.27
37 38 2.169769 TGTCGTCCTCAACTGAAAACCT 59.830 45.455 0.00 0.00 0.00 3.50
38 39 2.801111 GTCGTCCTCAACTGAAAACCTC 59.199 50.000 0.00 0.00 0.00 3.85
39 40 2.432874 TCGTCCTCAACTGAAAACCTCA 59.567 45.455 0.00 0.00 0.00 3.86
40 41 3.118555 TCGTCCTCAACTGAAAACCTCAA 60.119 43.478 0.00 0.00 32.17 3.02
41 42 3.625764 CGTCCTCAACTGAAAACCTCAAA 59.374 43.478 0.00 0.00 32.17 2.69
42 43 4.275936 CGTCCTCAACTGAAAACCTCAAAT 59.724 41.667 0.00 0.00 32.17 2.32
43 44 5.221048 CGTCCTCAACTGAAAACCTCAAATT 60.221 40.000 0.00 0.00 32.17 1.82
44 45 6.209361 GTCCTCAACTGAAAACCTCAAATTC 58.791 40.000 0.00 0.00 32.17 2.17
45 46 5.301805 TCCTCAACTGAAAACCTCAAATTCC 59.698 40.000 0.00 0.00 32.17 3.01
46 47 5.068987 CCTCAACTGAAAACCTCAAATTCCA 59.931 40.000 0.00 0.00 32.17 3.53
47 48 5.901552 TCAACTGAAAACCTCAAATTCCAC 58.098 37.500 0.00 0.00 32.17 4.02
48 49 5.420421 TCAACTGAAAACCTCAAATTCCACA 59.580 36.000 0.00 0.00 32.17 4.17
49 50 5.520376 ACTGAAAACCTCAAATTCCACAG 57.480 39.130 0.00 0.00 32.17 3.66
50 51 5.200483 ACTGAAAACCTCAAATTCCACAGA 58.800 37.500 0.00 0.00 32.17 3.41
51 52 5.067805 ACTGAAAACCTCAAATTCCACAGAC 59.932 40.000 0.00 0.00 32.17 3.51
52 53 4.952957 TGAAAACCTCAAATTCCACAGACA 59.047 37.500 0.00 0.00 0.00 3.41
53 54 5.067674 TGAAAACCTCAAATTCCACAGACAG 59.932 40.000 0.00 0.00 0.00 3.51
54 55 4.437682 AACCTCAAATTCCACAGACAGA 57.562 40.909 0.00 0.00 0.00 3.41
55 56 4.013267 ACCTCAAATTCCACAGACAGAG 57.987 45.455 0.00 0.00 0.00 3.35
56 57 3.244700 ACCTCAAATTCCACAGACAGAGG 60.245 47.826 0.00 0.00 45.24 3.69
57 58 3.341823 CTCAAATTCCACAGACAGAGGG 58.658 50.000 0.00 0.00 0.00 4.30
58 59 1.815003 CAAATTCCACAGACAGAGGGC 59.185 52.381 0.00 0.00 0.00 5.19
59 60 0.329596 AATTCCACAGACAGAGGGCC 59.670 55.000 0.00 0.00 0.00 5.80
60 61 0.842030 ATTCCACAGACAGAGGGCCA 60.842 55.000 6.18 0.00 0.00 5.36
61 62 1.768684 TTCCACAGACAGAGGGCCAC 61.769 60.000 6.18 0.00 0.00 5.01
62 63 2.047844 CACAGACAGAGGGCCACG 60.048 66.667 6.18 0.00 0.00 4.94
63 64 4.008933 ACAGACAGAGGGCCACGC 62.009 66.667 6.18 0.00 0.00 5.34
75 76 3.414700 CCACGCGCACTCTCCAAC 61.415 66.667 5.73 0.00 0.00 3.77
76 77 2.356313 CACGCGCACTCTCCAACT 60.356 61.111 5.73 0.00 0.00 3.16
77 78 1.956170 CACGCGCACTCTCCAACTT 60.956 57.895 5.73 0.00 0.00 2.66
78 79 1.956170 ACGCGCACTCTCCAACTTG 60.956 57.895 5.73 0.00 0.00 3.16
79 80 2.558313 GCGCACTCTCCAACTTGC 59.442 61.111 0.30 0.00 0.00 4.01
81 82 2.558313 GCACTCTCCAACTTGCGC 59.442 61.111 0.00 0.00 0.00 6.09
82 83 2.253758 GCACTCTCCAACTTGCGCA 61.254 57.895 5.66 5.66 0.00 6.09
83 84 1.785041 GCACTCTCCAACTTGCGCAA 61.785 55.000 23.48 23.48 0.00 4.85
84 85 0.236711 CACTCTCCAACTTGCGCAAG 59.763 55.000 40.80 40.80 43.79 4.01
96 97 2.480555 CGCAAGTCCGCATCAACC 59.519 61.111 0.00 0.00 0.00 3.77
97 98 2.877691 GCAAGTCCGCATCAACCC 59.122 61.111 0.00 0.00 0.00 4.11
98 99 1.971167 GCAAGTCCGCATCAACCCA 60.971 57.895 0.00 0.00 0.00 4.51
99 100 1.875963 CAAGTCCGCATCAACCCAC 59.124 57.895 0.00 0.00 0.00 4.61
100 101 0.606401 CAAGTCCGCATCAACCCACT 60.606 55.000 0.00 0.00 0.00 4.00
101 102 0.110486 AAGTCCGCATCAACCCACTT 59.890 50.000 0.00 0.00 0.00 3.16
102 103 0.110486 AGTCCGCATCAACCCACTTT 59.890 50.000 0.00 0.00 0.00 2.66
103 104 1.349688 AGTCCGCATCAACCCACTTTA 59.650 47.619 0.00 0.00 0.00 1.85
104 105 2.156098 GTCCGCATCAACCCACTTTAA 58.844 47.619 0.00 0.00 0.00 1.52
105 106 2.161609 GTCCGCATCAACCCACTTTAAG 59.838 50.000 0.00 0.00 0.00 1.85
106 107 1.472480 CCGCATCAACCCACTTTAAGG 59.528 52.381 0.00 0.00 0.00 2.69
107 108 1.135402 CGCATCAACCCACTTTAAGGC 60.135 52.381 0.00 0.00 0.00 4.35
108 109 1.204704 GCATCAACCCACTTTAAGGCC 59.795 52.381 0.00 0.00 0.00 5.19
109 110 2.524306 CATCAACCCACTTTAAGGCCA 58.476 47.619 5.01 0.00 0.00 5.36
110 111 2.286365 TCAACCCACTTTAAGGCCAG 57.714 50.000 5.01 0.00 0.00 4.85
111 112 0.603065 CAACCCACTTTAAGGCCAGC 59.397 55.000 5.01 0.00 0.00 4.85
112 113 0.482887 AACCCACTTTAAGGCCAGCT 59.517 50.000 5.01 0.00 0.00 4.24
113 114 0.038310 ACCCACTTTAAGGCCAGCTC 59.962 55.000 5.01 0.00 0.00 4.09
114 115 0.038166 CCCACTTTAAGGCCAGCTCA 59.962 55.000 5.01 0.00 0.00 4.26
115 116 1.457346 CCACTTTAAGGCCAGCTCAG 58.543 55.000 5.01 0.00 0.00 3.35
116 117 1.457346 CACTTTAAGGCCAGCTCAGG 58.543 55.000 5.01 0.00 0.00 3.86
117 118 1.068121 ACTTTAAGGCCAGCTCAGGT 58.932 50.000 5.01 0.00 0.00 4.00
118 119 1.425448 ACTTTAAGGCCAGCTCAGGTT 59.575 47.619 5.01 0.00 0.00 3.50
119 120 2.158460 ACTTTAAGGCCAGCTCAGGTTT 60.158 45.455 5.01 0.00 0.00 3.27
120 121 2.675658 TTAAGGCCAGCTCAGGTTTT 57.324 45.000 5.01 0.00 0.00 2.43
121 122 1.909700 TAAGGCCAGCTCAGGTTTTG 58.090 50.000 5.01 0.00 0.00 2.44
122 123 0.185901 AAGGCCAGCTCAGGTTTTGA 59.814 50.000 5.01 0.00 0.00 2.69
133 134 2.616842 TCAGGTTTTGAGAAAGAACCGC 59.383 45.455 0.00 0.00 45.77 5.68
134 135 2.357637 CAGGTTTTGAGAAAGAACCGCA 59.642 45.455 0.00 0.00 45.77 5.69
135 136 2.618709 AGGTTTTGAGAAAGAACCGCAG 59.381 45.455 0.00 0.00 45.77 5.18
136 137 2.385315 GTTTTGAGAAAGAACCGCAGC 58.615 47.619 0.00 0.00 0.00 5.25
137 138 0.951558 TTTGAGAAAGAACCGCAGCC 59.048 50.000 0.00 0.00 0.00 4.85
138 139 0.889186 TTGAGAAAGAACCGCAGCCC 60.889 55.000 0.00 0.00 0.00 5.19
139 140 2.034221 AGAAAGAACCGCAGCCCC 59.966 61.111 0.00 0.00 0.00 5.80
140 141 2.034221 GAAAGAACCGCAGCCCCT 59.966 61.111 0.00 0.00 0.00 4.79
141 142 2.034221 AAAGAACCGCAGCCCCTC 59.966 61.111 0.00 0.00 0.00 4.30
142 143 2.748058 GAAAGAACCGCAGCCCCTCA 62.748 60.000 0.00 0.00 0.00 3.86
143 144 3.553095 AAGAACCGCAGCCCCTCAC 62.553 63.158 0.00 0.00 0.00 3.51
149 150 4.767255 GCAGCCCCTCACCGTGAG 62.767 72.222 19.97 19.97 43.91 3.51
163 164 2.670401 CGTGAGGTTTCTTTCAGCAC 57.330 50.000 0.00 0.00 0.00 4.40
164 165 1.939934 CGTGAGGTTTCTTTCAGCACA 59.060 47.619 0.00 0.00 0.00 4.57
165 166 2.286418 CGTGAGGTTTCTTTCAGCACAC 60.286 50.000 0.00 0.00 32.06 3.82
166 167 1.939934 TGAGGTTTCTTTCAGCACACG 59.060 47.619 0.00 0.00 0.00 4.49
167 168 0.663153 AGGTTTCTTTCAGCACACGC 59.337 50.000 0.00 0.00 38.99 5.34
168 169 0.657368 GGTTTCTTTCAGCACACGCG 60.657 55.000 3.53 3.53 45.49 6.01
169 170 0.303493 GTTTCTTTCAGCACACGCGA 59.697 50.000 15.93 0.00 45.49 5.87
170 171 0.303493 TTTCTTTCAGCACACGCGAC 59.697 50.000 15.93 0.00 45.49 5.19
171 172 1.817217 TTCTTTCAGCACACGCGACG 61.817 55.000 15.93 5.81 45.49 5.12
172 173 3.893914 CTTTCAGCACACGCGACGC 62.894 63.158 15.93 10.49 45.49 5.19
183 184 3.764049 GCGACGCGTCCACTTCAC 61.764 66.667 31.84 6.96 0.00 3.18
184 185 2.354188 CGACGCGTCCACTTCACA 60.354 61.111 31.84 0.00 0.00 3.58
185 186 1.947146 CGACGCGTCCACTTCACAA 60.947 57.895 31.84 0.00 0.00 3.33
186 187 1.563173 GACGCGTCCACTTCACAAC 59.437 57.895 28.61 0.00 0.00 3.32
187 188 1.828331 GACGCGTCCACTTCACAACC 61.828 60.000 28.61 0.00 0.00 3.77
188 189 1.594293 CGCGTCCACTTCACAACCT 60.594 57.895 0.00 0.00 0.00 3.50
189 190 1.557443 CGCGTCCACTTCACAACCTC 61.557 60.000 0.00 0.00 0.00 3.85
190 191 0.249911 GCGTCCACTTCACAACCTCT 60.250 55.000 0.00 0.00 0.00 3.69
191 192 1.784525 CGTCCACTTCACAACCTCTC 58.215 55.000 0.00 0.00 0.00 3.20
192 193 1.068588 CGTCCACTTCACAACCTCTCA 59.931 52.381 0.00 0.00 0.00 3.27
193 194 2.483013 CGTCCACTTCACAACCTCTCAA 60.483 50.000 0.00 0.00 0.00 3.02
194 195 3.541632 GTCCACTTCACAACCTCTCAAA 58.458 45.455 0.00 0.00 0.00 2.69
195 196 3.945285 GTCCACTTCACAACCTCTCAAAA 59.055 43.478 0.00 0.00 0.00 2.44
196 197 4.398044 GTCCACTTCACAACCTCTCAAAAA 59.602 41.667 0.00 0.00 0.00 1.94
217 218 3.646736 ATAGTAGCAACTCCAAACCCC 57.353 47.619 0.00 0.00 37.15 4.95
218 219 0.404426 AGTAGCAACTCCAAACCCCC 59.596 55.000 0.00 0.00 0.00 5.40
262 263 2.125512 AGCCCACAACGCTCGATC 60.126 61.111 0.00 0.00 0.00 3.69
263 264 3.554692 GCCCACAACGCTCGATCG 61.555 66.667 9.36 9.36 0.00 3.69
264 265 3.554692 CCCACAACGCTCGATCGC 61.555 66.667 11.09 0.00 0.00 4.58
287 288 2.809601 CGCCGTCGAGACCCAAAG 60.810 66.667 0.00 0.00 38.10 2.77
338 339 4.451150 CGCCTTCCGTGCAGCCTA 62.451 66.667 0.00 0.00 0.00 3.93
353 354 1.604604 GCCTACAGCTGGTTTGACAA 58.395 50.000 19.93 0.00 38.99 3.18
365 366 2.450160 GTTTGACAACCAACTGAAGCG 58.550 47.619 0.00 0.00 33.85 4.68
366 367 1.745232 TTGACAACCAACTGAAGCGT 58.255 45.000 0.00 0.00 0.00 5.07
375 376 1.053424 AACTGAAGCGTCCCACCTAA 58.947 50.000 0.00 0.00 0.00 2.69
383 384 1.001048 GCGTCCCACCTAACCAAAAAC 60.001 52.381 0.00 0.00 0.00 2.43
405 422 2.124236 CGAGAGCCTACTCCCGGT 60.124 66.667 0.00 0.00 44.65 5.28
406 423 2.188161 CGAGAGCCTACTCCCGGTC 61.188 68.421 0.00 0.00 44.65 4.79
407 424 1.829096 GAGAGCCTACTCCCGGTCC 60.829 68.421 0.00 0.00 44.65 4.46
408 425 2.043248 GAGCCTACTCCCGGTCCA 60.043 66.667 0.00 0.00 36.90 4.02
409 426 1.457831 GAGCCTACTCCCGGTCCAT 60.458 63.158 0.00 0.00 36.90 3.41
410 427 1.003051 AGCCTACTCCCGGTCCATT 59.997 57.895 0.00 0.00 0.00 3.16
411 428 1.049289 AGCCTACTCCCGGTCCATTC 61.049 60.000 0.00 0.00 0.00 2.67
412 429 1.335132 GCCTACTCCCGGTCCATTCA 61.335 60.000 0.00 0.00 0.00 2.57
413 430 1.424638 CCTACTCCCGGTCCATTCAT 58.575 55.000 0.00 0.00 0.00 2.57
414 431 1.768870 CCTACTCCCGGTCCATTCATT 59.231 52.381 0.00 0.00 0.00 2.57
415 432 2.172717 CCTACTCCCGGTCCATTCATTT 59.827 50.000 0.00 0.00 0.00 2.32
416 433 2.899303 ACTCCCGGTCCATTCATTTT 57.101 45.000 0.00 0.00 0.00 1.82
417 434 3.169512 ACTCCCGGTCCATTCATTTTT 57.830 42.857 0.00 0.00 0.00 1.94
442 459 2.503147 AAAAAGGAGGATGGCCCCT 58.497 52.632 0.00 0.00 39.77 4.79
443 460 0.041684 AAAAAGGAGGATGGCCCCTG 59.958 55.000 5.12 0.00 36.49 4.45
444 461 2.520657 AAAAGGAGGATGGCCCCTGC 62.521 60.000 11.03 11.03 44.01 4.85
454 471 3.978164 GCCCCTGCCTCTACATCT 58.022 61.111 0.00 0.00 0.00 2.90
455 472 3.149436 GCCCCTGCCTCTACATCTA 57.851 57.895 0.00 0.00 0.00 1.98
456 473 0.972883 GCCCCTGCCTCTACATCTAG 59.027 60.000 0.00 0.00 0.00 2.43
457 474 1.481428 GCCCCTGCCTCTACATCTAGA 60.481 57.143 0.00 0.00 0.00 2.43
458 475 2.964209 CCCCTGCCTCTACATCTAGAA 58.036 52.381 0.00 0.00 0.00 2.10
459 476 3.309296 CCCCTGCCTCTACATCTAGAAA 58.691 50.000 0.00 0.00 0.00 2.52
460 477 3.711704 CCCCTGCCTCTACATCTAGAAAA 59.288 47.826 0.00 0.00 0.00 2.29
461 478 4.349342 CCCCTGCCTCTACATCTAGAAAAT 59.651 45.833 0.00 0.00 0.00 1.82
462 479 5.303971 CCCTGCCTCTACATCTAGAAAATG 58.696 45.833 0.00 0.00 0.00 2.32
463 480 4.754114 CCTGCCTCTACATCTAGAAAATGC 59.246 45.833 0.00 0.00 0.00 3.56
464 481 5.357742 TGCCTCTACATCTAGAAAATGCA 57.642 39.130 0.00 0.00 0.00 3.96
465 482 5.933617 TGCCTCTACATCTAGAAAATGCAT 58.066 37.500 0.00 0.00 0.00 3.96
466 483 7.066307 TGCCTCTACATCTAGAAAATGCATA 57.934 36.000 0.00 0.00 0.00 3.14
467 484 6.931281 TGCCTCTACATCTAGAAAATGCATAC 59.069 38.462 0.00 0.00 0.00 2.39
468 485 6.090088 GCCTCTACATCTAGAAAATGCATACG 59.910 42.308 0.00 0.00 0.00 3.06
469 486 6.587990 CCTCTACATCTAGAAAATGCATACGG 59.412 42.308 0.00 0.00 0.00 4.02
470 487 7.050970 TCTACATCTAGAAAATGCATACGGT 57.949 36.000 0.00 0.00 0.00 4.83
471 488 7.497595 TCTACATCTAGAAAATGCATACGGTT 58.502 34.615 0.00 0.00 0.00 4.44
472 489 8.635328 TCTACATCTAGAAAATGCATACGGTTA 58.365 33.333 0.00 0.00 0.00 2.85
473 490 7.478520 ACATCTAGAAAATGCATACGGTTAC 57.521 36.000 0.00 0.00 0.00 2.50
474 491 7.272978 ACATCTAGAAAATGCATACGGTTACT 58.727 34.615 0.00 0.00 0.00 2.24
475 492 7.769044 ACATCTAGAAAATGCATACGGTTACTT 59.231 33.333 0.00 0.00 0.00 2.24
476 493 8.612619 CATCTAGAAAATGCATACGGTTACTTT 58.387 33.333 0.00 0.00 0.00 2.66
477 494 9.826574 ATCTAGAAAATGCATACGGTTACTTTA 57.173 29.630 0.00 0.00 0.00 1.85
478 495 9.826574 TCTAGAAAATGCATACGGTTACTTTAT 57.173 29.630 0.00 0.00 0.00 1.40
481 498 8.952278 AGAAAATGCATACGGTTACTTTATTGA 58.048 29.630 0.00 0.00 0.00 2.57
482 499 9.730420 GAAAATGCATACGGTTACTTTATTGAT 57.270 29.630 0.00 0.00 0.00 2.57
493 510 9.716507 CGGTTACTTTATTGATTATTGTTGAGG 57.283 33.333 0.00 0.00 0.00 3.86
498 515 9.533831 ACTTTATTGATTATTGTTGAGGACCTT 57.466 29.630 0.00 0.00 0.00 3.50
532 549 8.514330 TTACAAACAATATACCTGAATCCACC 57.486 34.615 0.00 0.00 0.00 4.61
533 550 6.489603 ACAAACAATATACCTGAATCCACCA 58.510 36.000 0.00 0.00 0.00 4.17
534 551 7.125391 ACAAACAATATACCTGAATCCACCAT 58.875 34.615 0.00 0.00 0.00 3.55
535 552 7.285401 ACAAACAATATACCTGAATCCACCATC 59.715 37.037 0.00 0.00 0.00 3.51
536 553 6.770286 ACAATATACCTGAATCCACCATCT 57.230 37.500 0.00 0.00 0.00 2.90
537 554 7.154191 ACAATATACCTGAATCCACCATCTT 57.846 36.000 0.00 0.00 0.00 2.40
538 555 7.000472 ACAATATACCTGAATCCACCATCTTG 59.000 38.462 0.00 0.00 0.00 3.02
539 556 7.147320 ACAATATACCTGAATCCACCATCTTGA 60.147 37.037 0.00 0.00 0.00 3.02
540 557 3.356529 ACCTGAATCCACCATCTTGAC 57.643 47.619 0.00 0.00 0.00 3.18
541 558 2.644299 ACCTGAATCCACCATCTTGACA 59.356 45.455 0.00 0.00 0.00 3.58
542 559 3.074390 ACCTGAATCCACCATCTTGACAA 59.926 43.478 0.00 0.00 0.00 3.18
543 560 3.441572 CCTGAATCCACCATCTTGACAAC 59.558 47.826 0.00 0.00 0.00 3.32
544 561 4.074259 CTGAATCCACCATCTTGACAACA 58.926 43.478 0.00 0.00 0.00 3.33
545 562 4.665451 TGAATCCACCATCTTGACAACAT 58.335 39.130 0.00 0.00 0.00 2.71
546 563 5.814481 TGAATCCACCATCTTGACAACATA 58.186 37.500 0.00 0.00 0.00 2.29
547 564 6.425735 TGAATCCACCATCTTGACAACATAT 58.574 36.000 0.00 0.00 0.00 1.78
548 565 7.572814 TGAATCCACCATCTTGACAACATATA 58.427 34.615 0.00 0.00 0.00 0.86
549 566 7.498900 TGAATCCACCATCTTGACAACATATAC 59.501 37.037 0.00 0.00 0.00 1.47
550 567 5.680619 TCCACCATCTTGACAACATATACC 58.319 41.667 0.00 0.00 0.00 2.73
551 568 4.511454 CCACCATCTTGACAACATATACCG 59.489 45.833 0.00 0.00 0.00 4.02
552 569 4.024893 CACCATCTTGACAACATATACCGC 60.025 45.833 0.00 0.00 0.00 5.68
553 570 4.141711 ACCATCTTGACAACATATACCGCT 60.142 41.667 0.00 0.00 0.00 5.52
554 571 5.069914 ACCATCTTGACAACATATACCGCTA 59.930 40.000 0.00 0.00 0.00 4.26
555 572 6.166279 CCATCTTGACAACATATACCGCTAT 58.834 40.000 0.00 0.00 0.00 2.97
556 573 6.650807 CCATCTTGACAACATATACCGCTATT 59.349 38.462 0.00 0.00 0.00 1.73
557 574 7.148573 CCATCTTGACAACATATACCGCTATTC 60.149 40.741 0.00 0.00 0.00 1.75
558 575 7.050970 TCTTGACAACATATACCGCTATTCT 57.949 36.000 0.00 0.00 0.00 2.40
559 576 7.497595 TCTTGACAACATATACCGCTATTCTT 58.502 34.615 0.00 0.00 0.00 2.52
560 577 8.635328 TCTTGACAACATATACCGCTATTCTTA 58.365 33.333 0.00 0.00 0.00 2.10
561 578 9.424319 CTTGACAACATATACCGCTATTCTTAT 57.576 33.333 0.00 0.00 0.00 1.73
562 579 8.981724 TGACAACATATACCGCTATTCTTATC 57.018 34.615 0.00 0.00 0.00 1.75
563 580 8.033038 TGACAACATATACCGCTATTCTTATCC 58.967 37.037 0.00 0.00 0.00 2.59
564 581 7.903145 ACAACATATACCGCTATTCTTATCCA 58.097 34.615 0.00 0.00 0.00 3.41
565 582 8.372459 ACAACATATACCGCTATTCTTATCCAA 58.628 33.333 0.00 0.00 0.00 3.53
566 583 9.214957 CAACATATACCGCTATTCTTATCCAAA 57.785 33.333 0.00 0.00 0.00 3.28
567 584 9.959721 AACATATACCGCTATTCTTATCCAAAT 57.040 29.630 0.00 0.00 0.00 2.32
568 585 9.383519 ACATATACCGCTATTCTTATCCAAATG 57.616 33.333 0.00 0.00 0.00 2.32
569 586 9.599866 CATATACCGCTATTCTTATCCAAATGA 57.400 33.333 0.00 0.00 0.00 2.57
571 588 6.808008 ACCGCTATTCTTATCCAAATGATG 57.192 37.500 0.00 0.00 34.76 3.07
572 589 6.533730 ACCGCTATTCTTATCCAAATGATGA 58.466 36.000 0.00 0.00 34.76 2.92
573 590 6.998074 ACCGCTATTCTTATCCAAATGATGAA 59.002 34.615 0.00 0.00 34.76 2.57
574 591 7.173907 ACCGCTATTCTTATCCAAATGATGAAG 59.826 37.037 0.00 0.00 34.76 3.02
575 592 7.361542 CCGCTATTCTTATCCAAATGATGAAGG 60.362 40.741 0.00 0.00 34.76 3.46
576 593 7.361542 CGCTATTCTTATCCAAATGATGAAGGG 60.362 40.741 0.00 0.00 34.76 3.95
577 594 7.667219 GCTATTCTTATCCAAATGATGAAGGGA 59.333 37.037 0.00 0.00 34.76 4.20
578 595 9.750783 CTATTCTTATCCAAATGATGAAGGGAT 57.249 33.333 0.00 0.00 41.13 3.85
579 596 7.828508 TTCTTATCCAAATGATGAAGGGATG 57.171 36.000 0.00 0.00 38.72 3.51
580 597 5.771666 TCTTATCCAAATGATGAAGGGATGC 59.228 40.000 0.00 0.00 38.72 3.91
581 598 3.675348 TCCAAATGATGAAGGGATGCT 57.325 42.857 0.00 0.00 0.00 3.79
582 599 4.794311 TCCAAATGATGAAGGGATGCTA 57.206 40.909 0.00 0.00 0.00 3.49
583 600 4.722220 TCCAAATGATGAAGGGATGCTAG 58.278 43.478 0.00 0.00 0.00 3.42
584 601 3.255149 CCAAATGATGAAGGGATGCTAGC 59.745 47.826 8.10 8.10 0.00 3.42
585 602 4.142790 CAAATGATGAAGGGATGCTAGCT 58.857 43.478 17.23 0.83 0.00 3.32
586 603 2.924757 TGATGAAGGGATGCTAGCTG 57.075 50.000 17.23 0.00 0.00 4.24
587 604 1.419012 TGATGAAGGGATGCTAGCTGG 59.581 52.381 17.23 0.00 0.00 4.85
588 605 0.769873 ATGAAGGGATGCTAGCTGGG 59.230 55.000 17.23 0.00 0.00 4.45
589 606 0.621571 TGAAGGGATGCTAGCTGGGT 60.622 55.000 17.23 0.00 0.00 4.51
590 607 0.107643 GAAGGGATGCTAGCTGGGTC 59.892 60.000 17.23 8.63 0.00 4.46
591 608 0.621571 AAGGGATGCTAGCTGGGTCA 60.622 55.000 17.23 0.00 0.00 4.02
592 609 1.147153 GGGATGCTAGCTGGGTCAC 59.853 63.158 17.23 6.40 0.00 3.67
593 610 1.341156 GGGATGCTAGCTGGGTCACT 61.341 60.000 17.23 0.00 0.00 3.41
594 611 1.414158 GGATGCTAGCTGGGTCACTA 58.586 55.000 17.23 0.00 0.00 2.74
595 612 1.069358 GGATGCTAGCTGGGTCACTAC 59.931 57.143 17.23 0.00 0.00 2.73
596 613 1.069358 GATGCTAGCTGGGTCACTACC 59.931 57.143 17.23 0.00 45.97 3.18
606 623 2.180432 GGTCACTACCCAAACCACTC 57.820 55.000 0.00 0.00 40.21 3.51
607 624 1.418637 GGTCACTACCCAAACCACTCA 59.581 52.381 0.00 0.00 40.21 3.41
608 625 2.490991 GTCACTACCCAAACCACTCAC 58.509 52.381 0.00 0.00 0.00 3.51
609 626 1.418637 TCACTACCCAAACCACTCACC 59.581 52.381 0.00 0.00 0.00 4.02
610 627 1.420138 CACTACCCAAACCACTCACCT 59.580 52.381 0.00 0.00 0.00 4.00
611 628 2.635915 CACTACCCAAACCACTCACCTA 59.364 50.000 0.00 0.00 0.00 3.08
612 629 3.071892 CACTACCCAAACCACTCACCTAA 59.928 47.826 0.00 0.00 0.00 2.69
613 630 2.951229 ACCCAAACCACTCACCTAAG 57.049 50.000 0.00 0.00 0.00 2.18
614 631 1.202891 ACCCAAACCACTCACCTAAGC 60.203 52.381 0.00 0.00 0.00 3.09
615 632 1.073923 CCCAAACCACTCACCTAAGCT 59.926 52.381 0.00 0.00 0.00 3.74
616 633 2.489073 CCCAAACCACTCACCTAAGCTT 60.489 50.000 3.48 3.48 0.00 3.74
617 634 3.244770 CCCAAACCACTCACCTAAGCTTA 60.245 47.826 5.94 5.94 0.00 3.09
618 635 4.394729 CCAAACCACTCACCTAAGCTTAA 58.605 43.478 7.74 0.00 0.00 1.85
619 636 4.215613 CCAAACCACTCACCTAAGCTTAAC 59.784 45.833 7.74 0.00 0.00 2.01
620 637 4.699925 AACCACTCACCTAAGCTTAACA 57.300 40.909 7.74 0.00 0.00 2.41
621 638 4.910458 ACCACTCACCTAAGCTTAACAT 57.090 40.909 7.74 0.00 0.00 2.71
622 639 4.833390 ACCACTCACCTAAGCTTAACATC 58.167 43.478 7.74 0.00 0.00 3.06
623 640 4.286032 ACCACTCACCTAAGCTTAACATCA 59.714 41.667 7.74 0.00 0.00 3.07
624 641 5.221843 ACCACTCACCTAAGCTTAACATCAA 60.222 40.000 7.74 0.00 0.00 2.57
625 642 5.705441 CCACTCACCTAAGCTTAACATCAAA 59.295 40.000 7.74 0.00 0.00 2.69
626 643 6.206634 CCACTCACCTAAGCTTAACATCAAAA 59.793 38.462 7.74 0.00 0.00 2.44
627 644 7.301054 CACTCACCTAAGCTTAACATCAAAAG 58.699 38.462 7.74 0.00 0.00 2.27
628 645 6.072452 ACTCACCTAAGCTTAACATCAAAAGC 60.072 38.462 7.74 0.00 46.76 3.51
633 650 3.569250 GCTTAACATCAAAAGCCGGAA 57.431 42.857 5.05 0.00 41.80 4.30
634 651 3.501950 GCTTAACATCAAAAGCCGGAAG 58.498 45.455 5.05 0.00 41.80 3.46
635 652 3.501950 CTTAACATCAAAAGCCGGAAGC 58.498 45.455 5.05 0.00 44.25 3.86
636 653 0.603065 AACATCAAAAGCCGGAAGCC 59.397 50.000 5.05 0.00 45.47 4.35
637 654 0.251341 ACATCAAAAGCCGGAAGCCT 60.251 50.000 5.05 0.00 45.47 4.58
638 655 0.453390 CATCAAAAGCCGGAAGCCTC 59.547 55.000 5.05 0.00 45.47 4.70
639 656 0.038166 ATCAAAAGCCGGAAGCCTCA 59.962 50.000 5.05 0.00 45.47 3.86
640 657 0.606401 TCAAAAGCCGGAAGCCTCAG 60.606 55.000 5.05 0.00 45.47 3.35
641 658 1.973812 AAAAGCCGGAAGCCTCAGC 60.974 57.895 5.05 0.00 45.47 4.26
651 668 4.972875 GCCTCAGCTAAGCCACAT 57.027 55.556 0.00 0.00 35.50 3.21
653 670 1.587547 GCCTCAGCTAAGCCACATAC 58.412 55.000 0.00 0.00 35.50 2.39
654 671 1.811941 GCCTCAGCTAAGCCACATACC 60.812 57.143 0.00 0.00 35.50 2.73
655 672 1.539065 CCTCAGCTAAGCCACATACCG 60.539 57.143 0.00 0.00 0.00 4.02
656 673 1.137086 CTCAGCTAAGCCACATACCGT 59.863 52.381 0.00 0.00 0.00 4.83
657 674 1.134818 TCAGCTAAGCCACATACCGTG 60.135 52.381 0.00 0.00 45.92 4.94
658 675 0.902531 AGCTAAGCCACATACCGTGT 59.097 50.000 0.00 0.00 44.78 4.49
659 676 1.134788 AGCTAAGCCACATACCGTGTC 60.135 52.381 0.00 0.00 44.78 3.67
660 677 1.134788 GCTAAGCCACATACCGTGTCT 60.135 52.381 0.00 0.00 44.78 3.41
661 678 2.540515 CTAAGCCACATACCGTGTCTG 58.459 52.381 0.00 0.00 44.78 3.51
662 679 0.036388 AAGCCACATACCGTGTCTGG 60.036 55.000 0.00 0.00 44.78 3.86
663 680 1.449601 GCCACATACCGTGTCTGGG 60.450 63.158 0.00 0.00 44.78 4.45
664 681 1.220749 CCACATACCGTGTCTGGGG 59.779 63.158 0.00 0.00 44.78 4.96
665 682 1.449601 CACATACCGTGTCTGGGGC 60.450 63.158 0.00 0.00 39.62 5.80
666 683 1.916273 ACATACCGTGTCTGGGGCA 60.916 57.895 0.00 0.00 35.77 5.36
667 684 1.271840 ACATACCGTGTCTGGGGCAT 61.272 55.000 0.00 0.00 35.77 4.40
668 685 0.756294 CATACCGTGTCTGGGGCATA 59.244 55.000 0.00 0.00 0.00 3.14
669 686 1.140052 CATACCGTGTCTGGGGCATAA 59.860 52.381 0.00 0.00 0.00 1.90
670 687 1.502690 TACCGTGTCTGGGGCATAAT 58.497 50.000 0.00 0.00 0.00 1.28
671 688 0.180406 ACCGTGTCTGGGGCATAATC 59.820 55.000 0.00 0.00 0.00 1.75
672 689 0.469917 CCGTGTCTGGGGCATAATCT 59.530 55.000 0.00 0.00 0.00 2.40
673 690 1.586422 CGTGTCTGGGGCATAATCTG 58.414 55.000 0.00 0.00 0.00 2.90
674 691 1.811558 CGTGTCTGGGGCATAATCTGG 60.812 57.143 0.00 0.00 0.00 3.86
675 692 1.212935 GTGTCTGGGGCATAATCTGGT 59.787 52.381 0.00 0.00 0.00 4.00
676 693 1.490490 TGTCTGGGGCATAATCTGGTC 59.510 52.381 0.00 0.00 0.00 4.02
677 694 1.490490 GTCTGGGGCATAATCTGGTCA 59.510 52.381 0.00 0.00 0.00 4.02
678 695 1.770658 TCTGGGGCATAATCTGGTCAG 59.229 52.381 0.00 0.00 0.00 3.51
679 696 1.770658 CTGGGGCATAATCTGGTCAGA 59.229 52.381 2.93 2.93 42.37 3.27
680 697 1.490490 TGGGGCATAATCTGGTCAGAC 59.510 52.381 2.46 0.00 40.75 3.51
681 698 1.541233 GGGGCATAATCTGGTCAGACG 60.541 57.143 2.46 0.00 40.75 4.18
682 699 1.221414 GGCATAATCTGGTCAGACGC 58.779 55.000 2.46 4.33 40.75 5.19
683 700 1.473257 GGCATAATCTGGTCAGACGCA 60.473 52.381 2.46 0.00 40.75 5.24
684 701 1.594862 GCATAATCTGGTCAGACGCAC 59.405 52.381 2.46 0.00 40.75 5.34
685 702 2.739932 GCATAATCTGGTCAGACGCACT 60.740 50.000 2.46 0.00 40.75 4.40
686 703 2.941453 TAATCTGGTCAGACGCACTC 57.059 50.000 2.46 0.00 40.75 3.51
687 704 0.109086 AATCTGGTCAGACGCACTCG 60.109 55.000 2.46 0.00 40.75 4.18
688 705 2.549611 ATCTGGTCAGACGCACTCGC 62.550 60.000 2.46 0.00 40.75 5.03
705 722 3.097728 CGTATCGTCGCCGCCATC 61.098 66.667 0.00 0.00 0.00 3.51
706 723 2.335369 GTATCGTCGCCGCCATCT 59.665 61.111 0.00 0.00 0.00 2.90
707 724 1.299926 GTATCGTCGCCGCCATCTT 60.300 57.895 0.00 0.00 0.00 2.40
708 725 1.007734 TATCGTCGCCGCCATCTTC 60.008 57.895 0.00 0.00 0.00 2.87
709 726 2.416244 TATCGTCGCCGCCATCTTCC 62.416 60.000 0.00 0.00 0.00 3.46
710 727 4.812476 CGTCGCCGCCATCTTCCA 62.812 66.667 0.00 0.00 0.00 3.53
711 728 3.195698 GTCGCCGCCATCTTCCAC 61.196 66.667 0.00 0.00 0.00 4.02
712 729 3.700970 TCGCCGCCATCTTCCACA 61.701 61.111 0.00 0.00 0.00 4.17
713 730 2.745884 CGCCGCCATCTTCCACAA 60.746 61.111 0.00 0.00 0.00 3.33
714 731 2.331893 CGCCGCCATCTTCCACAAA 61.332 57.895 0.00 0.00 0.00 2.83
715 732 1.656818 CGCCGCCATCTTCCACAAAT 61.657 55.000 0.00 0.00 0.00 2.32
716 733 0.532115 GCCGCCATCTTCCACAAATT 59.468 50.000 0.00 0.00 0.00 1.82
717 734 1.469767 GCCGCCATCTTCCACAAATTC 60.470 52.381 0.00 0.00 0.00 2.17
718 735 1.202177 CCGCCATCTTCCACAAATTCG 60.202 52.381 0.00 0.00 0.00 3.34
719 736 1.468520 CGCCATCTTCCACAAATTCGT 59.531 47.619 0.00 0.00 0.00 3.85
720 737 2.095263 CGCCATCTTCCACAAATTCGTT 60.095 45.455 0.00 0.00 0.00 3.85
721 738 3.611530 CGCCATCTTCCACAAATTCGTTT 60.612 43.478 0.00 0.00 0.00 3.60
722 739 4.306600 GCCATCTTCCACAAATTCGTTTT 58.693 39.130 0.00 0.00 0.00 2.43
723 740 4.385748 GCCATCTTCCACAAATTCGTTTTC 59.614 41.667 0.00 0.00 0.00 2.29
724 741 5.527951 CCATCTTCCACAAATTCGTTTTCA 58.472 37.500 0.00 0.00 0.00 2.69
725 742 5.630680 CCATCTTCCACAAATTCGTTTTCAG 59.369 40.000 0.00 0.00 0.00 3.02
726 743 6.437928 CATCTTCCACAAATTCGTTTTCAGA 58.562 36.000 0.00 0.00 0.00 3.27
727 744 6.633500 TCTTCCACAAATTCGTTTTCAGAT 57.367 33.333 0.00 0.00 0.00 2.90
728 745 7.038154 TCTTCCACAAATTCGTTTTCAGATT 57.962 32.000 0.00 0.00 0.00 2.40
729 746 8.160521 TCTTCCACAAATTCGTTTTCAGATTA 57.839 30.769 0.00 0.00 0.00 1.75
730 747 8.792633 TCTTCCACAAATTCGTTTTCAGATTAT 58.207 29.630 0.00 0.00 0.00 1.28
754 771 6.749923 ATTGAAACTTCTATCTTGCCTGAC 57.250 37.500 0.00 0.00 0.00 3.51
755 772 4.579869 TGAAACTTCTATCTTGCCTGACC 58.420 43.478 0.00 0.00 0.00 4.02
756 773 4.041567 TGAAACTTCTATCTTGCCTGACCA 59.958 41.667 0.00 0.00 0.00 4.02
757 774 3.618690 ACTTCTATCTTGCCTGACCAC 57.381 47.619 0.00 0.00 0.00 4.16
758 775 3.177228 ACTTCTATCTTGCCTGACCACT 58.823 45.455 0.00 0.00 0.00 4.00
759 776 3.196685 ACTTCTATCTTGCCTGACCACTC 59.803 47.826 0.00 0.00 0.00 3.51
760 777 3.107402 TCTATCTTGCCTGACCACTCT 57.893 47.619 0.00 0.00 0.00 3.24
761 778 4.251103 TCTATCTTGCCTGACCACTCTA 57.749 45.455 0.00 0.00 0.00 2.43
762 779 3.954904 TCTATCTTGCCTGACCACTCTAC 59.045 47.826 0.00 0.00 0.00 2.59
763 780 1.267121 TCTTGCCTGACCACTCTACC 58.733 55.000 0.00 0.00 0.00 3.18
764 781 0.976641 CTTGCCTGACCACTCTACCA 59.023 55.000 0.00 0.00 0.00 3.25
765 782 1.556911 CTTGCCTGACCACTCTACCAT 59.443 52.381 0.00 0.00 0.00 3.55
766 783 1.656587 TGCCTGACCACTCTACCATT 58.343 50.000 0.00 0.00 0.00 3.16
767 784 1.278985 TGCCTGACCACTCTACCATTG 59.721 52.381 0.00 0.00 0.00 2.82
768 785 1.555075 GCCTGACCACTCTACCATTGA 59.445 52.381 0.00 0.00 0.00 2.57
769 786 2.171448 GCCTGACCACTCTACCATTGAT 59.829 50.000 0.00 0.00 0.00 2.57
770 787 3.801698 CCTGACCACTCTACCATTGATG 58.198 50.000 0.00 0.00 0.00 3.07
771 788 3.198635 CCTGACCACTCTACCATTGATGT 59.801 47.826 0.00 0.00 0.00 3.06
772 789 4.437239 CTGACCACTCTACCATTGATGTC 58.563 47.826 0.00 0.00 0.00 3.06
773 790 3.837731 TGACCACTCTACCATTGATGTCA 59.162 43.478 0.00 0.00 0.00 3.58
774 791 4.184629 GACCACTCTACCATTGATGTCAC 58.815 47.826 0.00 0.00 0.00 3.67
775 792 3.055094 ACCACTCTACCATTGATGTCACC 60.055 47.826 0.00 0.00 0.00 4.02
776 793 3.055167 CCACTCTACCATTGATGTCACCA 60.055 47.826 0.00 0.00 0.00 4.17
777 794 4.384537 CCACTCTACCATTGATGTCACCAT 60.385 45.833 0.00 0.00 0.00 3.55
778 795 4.813161 CACTCTACCATTGATGTCACCATC 59.187 45.833 0.00 0.00 46.41 3.51
779 796 4.141620 ACTCTACCATTGATGTCACCATCC 60.142 45.833 0.60 0.00 45.78 3.51
780 797 2.442236 ACCATTGATGTCACCATCCC 57.558 50.000 0.60 0.00 45.78 3.85
781 798 1.063717 ACCATTGATGTCACCATCCCC 60.064 52.381 0.60 0.00 45.78 4.81
782 799 1.216175 CCATTGATGTCACCATCCCCT 59.784 52.381 0.60 0.00 45.78 4.79
783 800 2.579873 CATTGATGTCACCATCCCCTC 58.420 52.381 0.60 0.00 45.78 4.30
784 801 0.918983 TTGATGTCACCATCCCCTCC 59.081 55.000 0.60 0.00 45.78 4.30
785 802 0.988145 TGATGTCACCATCCCCTCCC 60.988 60.000 0.60 0.00 45.78 4.30
786 803 2.044806 GATGTCACCATCCCCTCCCG 62.045 65.000 0.00 0.00 41.43 5.14
787 804 4.176752 GTCACCATCCCCTCCCGC 62.177 72.222 0.00 0.00 0.00 6.13
788 805 4.731853 TCACCATCCCCTCCCGCA 62.732 66.667 0.00 0.00 0.00 5.69
884 904 0.477202 CTCCCTCCCATCCCATCCAT 60.477 60.000 0.00 0.00 0.00 3.41
885 905 0.476415 TCCCTCCCATCCCATCCATC 60.476 60.000 0.00 0.00 0.00 3.51
886 906 1.504275 CCCTCCCATCCCATCCATCC 61.504 65.000 0.00 0.00 0.00 3.51
887 907 0.773305 CCTCCCATCCCATCCATCCA 60.773 60.000 0.00 0.00 0.00 3.41
899 919 3.353557 CATCCATCCATCCATCCATCAC 58.646 50.000 0.00 0.00 0.00 3.06
904 924 1.778484 TCCATCCATCCATCACATGCT 59.222 47.619 0.00 0.00 0.00 3.79
915 935 8.155510 CCATCCATCACATGCTTAGCTATATAT 58.844 37.037 5.60 0.00 0.00 0.86
1006 1048 1.753649 CGGACTGATCACTGATGGAGT 59.246 52.381 0.00 0.00 34.02 3.85
1015 1057 0.902984 ACTGATGGAGTGGGCGTACA 60.903 55.000 0.00 0.00 31.75 2.90
1386 1428 2.353607 CACGAGGAGATACGCCGC 60.354 66.667 0.00 0.00 0.00 6.53
1513 1555 2.737252 CTCGTTGCAAACTCTCCTTACC 59.263 50.000 0.00 0.00 46.99 2.85
1590 1632 4.147449 CTGATCGAGCCACCGCCA 62.147 66.667 0.00 0.00 34.57 5.69
1659 1701 1.065854 AGCCTGTGGAACTACTGATGC 60.066 52.381 0.00 0.00 38.04 3.91
1738 1780 3.521126 AGCTTAATATCGCCATCCAGGAT 59.479 43.478 0.00 0.00 41.22 3.24
1740 1782 2.119801 AATATCGCCATCCAGGATGC 57.880 50.000 22.82 16.61 41.22 3.91
1834 1945 4.599047 ATTAGTGCCAGAGATAGCACTC 57.401 45.455 19.84 0.00 41.73 3.51
1877 1988 5.390567 CGCTAAAATTCAAGCCTTTACTCGT 60.391 40.000 6.44 0.00 35.22 4.18
1920 2031 5.703130 GCTTTGAGATAACTTGGTCAGACTT 59.297 40.000 0.00 0.00 0.00 3.01
2020 2136 1.104577 AGCGCGAAAACAAAGGGGAA 61.105 50.000 12.10 0.00 0.00 3.97
2301 2428 2.202919 TGATGGATCAGTGCGCGG 60.203 61.111 8.83 0.00 32.11 6.46
2310 2437 2.100031 CAGTGCGCGGCAAGATGTA 61.100 57.895 8.83 0.00 41.47 2.29
2414 2541 0.976641 CCACACTTGCCTAGACTCCA 59.023 55.000 0.00 0.00 0.00 3.86
2473 2600 0.179059 TGACGCAGAGTTGGCAGAAA 60.179 50.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.726691 GACAACGACGGTCGCCATG 61.727 63.158 28.67 24.75 45.12 3.66
2 3 2.431942 GACAACGACGGTCGCCAT 60.432 61.111 28.67 14.81 45.12 4.40
7 8 1.441682 GAGGACGACAACGACGGTC 60.442 63.158 0.00 0.00 42.66 4.79
8 9 1.727511 TTGAGGACGACAACGACGGT 61.728 55.000 0.00 0.00 42.66 4.83
9 10 1.008194 TTGAGGACGACAACGACGG 60.008 57.895 0.00 0.00 42.66 4.79
10 11 2.130711 GTTGAGGACGACAACGACG 58.869 57.895 0.00 0.00 42.66 5.12
14 15 3.242641 GGTTTTCAGTTGAGGACGACAAC 60.243 47.826 0.00 0.00 45.15 3.32
15 16 2.940410 GGTTTTCAGTTGAGGACGACAA 59.060 45.455 0.00 0.00 33.15 3.18
16 17 2.169769 AGGTTTTCAGTTGAGGACGACA 59.830 45.455 0.00 0.00 33.15 4.35
17 18 2.801111 GAGGTTTTCAGTTGAGGACGAC 59.199 50.000 0.00 0.00 0.00 4.34
18 19 2.432874 TGAGGTTTTCAGTTGAGGACGA 59.567 45.455 0.00 0.00 0.00 4.20
19 20 2.833794 TGAGGTTTTCAGTTGAGGACG 58.166 47.619 0.00 0.00 0.00 4.79
20 21 5.774498 ATTTGAGGTTTTCAGTTGAGGAC 57.226 39.130 0.00 0.00 37.07 3.85
21 22 5.301805 GGAATTTGAGGTTTTCAGTTGAGGA 59.698 40.000 0.00 0.00 37.07 3.71
22 23 5.068987 TGGAATTTGAGGTTTTCAGTTGAGG 59.931 40.000 0.00 0.00 37.07 3.86
23 24 5.979517 GTGGAATTTGAGGTTTTCAGTTGAG 59.020 40.000 0.00 0.00 37.07 3.02
24 25 5.420421 TGTGGAATTTGAGGTTTTCAGTTGA 59.580 36.000 0.00 0.00 37.07 3.18
25 26 5.659463 TGTGGAATTTGAGGTTTTCAGTTG 58.341 37.500 0.00 0.00 37.07 3.16
26 27 5.656416 TCTGTGGAATTTGAGGTTTTCAGTT 59.344 36.000 0.00 0.00 37.07 3.16
27 28 5.067805 GTCTGTGGAATTTGAGGTTTTCAGT 59.932 40.000 0.00 0.00 37.07 3.41
28 29 5.067674 TGTCTGTGGAATTTGAGGTTTTCAG 59.932 40.000 0.00 0.00 37.07 3.02
29 30 4.952957 TGTCTGTGGAATTTGAGGTTTTCA 59.047 37.500 0.00 0.00 0.00 2.69
30 31 5.299279 TCTGTCTGTGGAATTTGAGGTTTTC 59.701 40.000 0.00 0.00 0.00 2.29
31 32 5.200483 TCTGTCTGTGGAATTTGAGGTTTT 58.800 37.500 0.00 0.00 0.00 2.43
32 33 4.792068 TCTGTCTGTGGAATTTGAGGTTT 58.208 39.130 0.00 0.00 0.00 3.27
33 34 4.392940 CTCTGTCTGTGGAATTTGAGGTT 58.607 43.478 0.00 0.00 0.00 3.50
34 35 3.244700 CCTCTGTCTGTGGAATTTGAGGT 60.245 47.826 0.00 0.00 36.16 3.85
35 36 3.341823 CCTCTGTCTGTGGAATTTGAGG 58.658 50.000 0.00 0.00 34.71 3.86
36 37 3.341823 CCCTCTGTCTGTGGAATTTGAG 58.658 50.000 0.00 0.00 0.00 3.02
37 38 2.553028 GCCCTCTGTCTGTGGAATTTGA 60.553 50.000 0.00 0.00 0.00 2.69
38 39 1.815003 GCCCTCTGTCTGTGGAATTTG 59.185 52.381 0.00 0.00 0.00 2.32
39 40 1.272147 GGCCCTCTGTCTGTGGAATTT 60.272 52.381 0.00 0.00 0.00 1.82
40 41 0.329596 GGCCCTCTGTCTGTGGAATT 59.670 55.000 0.00 0.00 0.00 2.17
41 42 0.842030 TGGCCCTCTGTCTGTGGAAT 60.842 55.000 0.00 0.00 0.00 3.01
42 43 1.461268 TGGCCCTCTGTCTGTGGAA 60.461 57.895 0.00 0.00 0.00 3.53
43 44 2.204034 TGGCCCTCTGTCTGTGGA 59.796 61.111 0.00 0.00 0.00 4.02
44 45 2.348998 GTGGCCCTCTGTCTGTGG 59.651 66.667 0.00 0.00 0.00 4.17
45 46 2.047844 CGTGGCCCTCTGTCTGTG 60.048 66.667 0.00 0.00 0.00 3.66
46 47 4.008933 GCGTGGCCCTCTGTCTGT 62.009 66.667 0.00 0.00 0.00 3.41
58 59 3.414700 GTTGGAGAGTGCGCGTGG 61.415 66.667 8.43 0.00 0.00 4.94
59 60 1.956170 AAGTTGGAGAGTGCGCGTG 60.956 57.895 8.43 0.00 0.00 5.34
60 61 1.956170 CAAGTTGGAGAGTGCGCGT 60.956 57.895 8.43 0.00 0.00 6.01
61 62 2.856032 CAAGTTGGAGAGTGCGCG 59.144 61.111 0.00 0.00 0.00 6.86
62 63 2.558313 GCAAGTTGGAGAGTGCGC 59.442 61.111 0.00 0.00 0.00 6.09
64 65 1.785041 TTGCGCAAGTTGGAGAGTGC 61.785 55.000 21.02 0.00 41.68 4.40
65 66 0.236711 CTTGCGCAAGTTGGAGAGTG 59.763 55.000 36.23 12.66 41.68 3.51
66 67 2.621763 CTTGCGCAAGTTGGAGAGT 58.378 52.632 36.23 0.00 41.68 3.24
75 76 2.099062 GATGCGGACTTGCGCAAG 59.901 61.111 40.80 40.80 44.46 4.01
76 77 2.257302 TTGATGCGGACTTGCGCAA 61.257 52.632 23.48 23.48 44.46 4.85
77 78 2.667874 TTGATGCGGACTTGCGCA 60.668 55.556 20.21 20.21 45.38 6.09
78 79 2.202349 GTTGATGCGGACTTGCGC 60.202 61.111 8.32 8.32 37.81 6.09
79 80 2.480555 GGTTGATGCGGACTTGCG 59.519 61.111 0.00 0.00 37.81 4.85
80 81 1.971167 TGGGTTGATGCGGACTTGC 60.971 57.895 0.00 0.00 0.00 4.01
81 82 0.606401 AGTGGGTTGATGCGGACTTG 60.606 55.000 0.00 0.00 0.00 3.16
82 83 0.110486 AAGTGGGTTGATGCGGACTT 59.890 50.000 0.00 0.00 0.00 3.01
83 84 0.110486 AAAGTGGGTTGATGCGGACT 59.890 50.000 0.00 0.00 0.00 3.85
84 85 1.816074 TAAAGTGGGTTGATGCGGAC 58.184 50.000 0.00 0.00 0.00 4.79
85 86 2.432444 CTTAAAGTGGGTTGATGCGGA 58.568 47.619 0.00 0.00 0.00 5.54
86 87 1.472480 CCTTAAAGTGGGTTGATGCGG 59.528 52.381 0.00 0.00 0.00 5.69
87 88 1.135402 GCCTTAAAGTGGGTTGATGCG 60.135 52.381 0.00 0.00 0.00 4.73
88 89 1.204704 GGCCTTAAAGTGGGTTGATGC 59.795 52.381 0.00 0.00 0.00 3.91
89 90 2.493278 CTGGCCTTAAAGTGGGTTGATG 59.507 50.000 3.32 0.00 0.00 3.07
90 91 2.807676 CTGGCCTTAAAGTGGGTTGAT 58.192 47.619 3.32 0.00 0.00 2.57
91 92 1.821666 GCTGGCCTTAAAGTGGGTTGA 60.822 52.381 3.32 0.00 0.00 3.18
92 93 0.603065 GCTGGCCTTAAAGTGGGTTG 59.397 55.000 3.32 0.00 0.00 3.77
93 94 0.482887 AGCTGGCCTTAAAGTGGGTT 59.517 50.000 3.32 0.00 0.00 4.11
94 95 0.038310 GAGCTGGCCTTAAAGTGGGT 59.962 55.000 3.32 0.00 0.00 4.51
95 96 0.038166 TGAGCTGGCCTTAAAGTGGG 59.962 55.000 3.32 0.00 0.00 4.61
96 97 1.457346 CTGAGCTGGCCTTAAAGTGG 58.543 55.000 3.32 0.00 0.00 4.00
97 98 1.271597 ACCTGAGCTGGCCTTAAAGTG 60.272 52.381 3.32 0.00 0.00 3.16
98 99 1.068121 ACCTGAGCTGGCCTTAAAGT 58.932 50.000 3.32 0.00 0.00 2.66
99 100 2.206576 AACCTGAGCTGGCCTTAAAG 57.793 50.000 3.32 0.00 0.00 1.85
100 101 2.627699 CAAAACCTGAGCTGGCCTTAAA 59.372 45.455 3.32 0.00 0.00 1.52
101 102 2.158534 TCAAAACCTGAGCTGGCCTTAA 60.159 45.455 3.32 0.00 0.00 1.85
102 103 1.423541 TCAAAACCTGAGCTGGCCTTA 59.576 47.619 3.32 0.00 0.00 2.69
103 104 0.185901 TCAAAACCTGAGCTGGCCTT 59.814 50.000 3.32 0.00 0.00 4.35
104 105 0.251077 CTCAAAACCTGAGCTGGCCT 60.251 55.000 3.32 0.00 45.11 5.19
105 106 2.261215 CTCAAAACCTGAGCTGGCC 58.739 57.895 0.00 0.00 45.11 5.36
112 113 2.616842 GCGGTTCTTTCTCAAAACCTGA 59.383 45.455 0.00 0.00 40.25 3.86
113 114 2.357637 TGCGGTTCTTTCTCAAAACCTG 59.642 45.455 0.00 0.00 40.25 4.00
114 115 2.618709 CTGCGGTTCTTTCTCAAAACCT 59.381 45.455 0.00 0.00 40.25 3.50
115 116 2.858646 GCTGCGGTTCTTTCTCAAAACC 60.859 50.000 0.00 0.00 39.25 3.27
116 117 2.385315 GCTGCGGTTCTTTCTCAAAAC 58.615 47.619 0.00 0.00 0.00 2.43
117 118 1.336755 GGCTGCGGTTCTTTCTCAAAA 59.663 47.619 0.00 0.00 0.00 2.44
118 119 0.951558 GGCTGCGGTTCTTTCTCAAA 59.048 50.000 0.00 0.00 0.00 2.69
119 120 0.889186 GGGCTGCGGTTCTTTCTCAA 60.889 55.000 0.00 0.00 0.00 3.02
120 121 1.302511 GGGCTGCGGTTCTTTCTCA 60.303 57.895 0.00 0.00 0.00 3.27
121 122 2.041115 GGGGCTGCGGTTCTTTCTC 61.041 63.158 0.00 0.00 0.00 2.87
122 123 2.034221 GGGGCTGCGGTTCTTTCT 59.966 61.111 0.00 0.00 0.00 2.52
123 124 2.034221 AGGGGCTGCGGTTCTTTC 59.966 61.111 0.00 0.00 0.00 2.62
124 125 2.034221 GAGGGGCTGCGGTTCTTT 59.966 61.111 0.00 0.00 0.00 2.52
125 126 3.249189 TGAGGGGCTGCGGTTCTT 61.249 61.111 0.00 0.00 0.00 2.52
126 127 4.021925 GTGAGGGGCTGCGGTTCT 62.022 66.667 0.00 0.00 0.00 3.01
132 133 4.767255 CTCACGGTGAGGGGCTGC 62.767 72.222 26.72 0.00 40.71 5.25
139 140 2.802816 CTGAAAGAAACCTCACGGTGAG 59.197 50.000 27.29 27.29 38.62 3.51
140 141 2.833794 CTGAAAGAAACCTCACGGTGA 58.166 47.619 10.88 10.88 38.62 4.02
141 142 1.264288 GCTGAAAGAAACCTCACGGTG 59.736 52.381 0.56 0.56 38.62 4.94
142 143 1.134220 TGCTGAAAGAAACCTCACGGT 60.134 47.619 0.00 0.00 41.03 4.83
143 144 1.264288 GTGCTGAAAGAAACCTCACGG 59.736 52.381 0.00 0.00 34.07 4.94
144 145 1.939934 TGTGCTGAAAGAAACCTCACG 59.060 47.619 0.00 0.00 34.07 4.35
145 146 2.286418 CGTGTGCTGAAAGAAACCTCAC 60.286 50.000 0.00 0.00 34.07 3.51
146 147 1.939934 CGTGTGCTGAAAGAAACCTCA 59.060 47.619 0.00 0.00 34.07 3.86
147 148 1.334149 GCGTGTGCTGAAAGAAACCTC 60.334 52.381 0.00 0.00 38.39 3.85
148 149 0.663153 GCGTGTGCTGAAAGAAACCT 59.337 50.000 0.00 0.00 38.39 3.50
149 150 0.657368 CGCGTGTGCTGAAAGAAACC 60.657 55.000 0.00 0.00 39.65 3.27
150 151 0.303493 TCGCGTGTGCTGAAAGAAAC 59.697 50.000 5.77 0.00 39.65 2.78
151 152 0.303493 GTCGCGTGTGCTGAAAGAAA 59.697 50.000 5.77 0.00 39.65 2.52
152 153 1.817217 CGTCGCGTGTGCTGAAAGAA 61.817 55.000 5.77 0.00 39.65 2.52
153 154 2.300066 CGTCGCGTGTGCTGAAAGA 61.300 57.895 5.77 0.00 39.65 2.52
154 155 2.168621 CGTCGCGTGTGCTGAAAG 59.831 61.111 5.77 0.00 39.65 2.62
155 156 3.995669 GCGTCGCGTGTGCTGAAA 61.996 61.111 5.77 0.00 39.65 2.69
166 167 3.764049 GTGAAGTGGACGCGTCGC 61.764 66.667 30.99 25.05 0.00 5.19
167 168 1.947146 TTGTGAAGTGGACGCGTCG 60.947 57.895 30.99 0.00 0.00 5.12
168 169 1.563173 GTTGTGAAGTGGACGCGTC 59.437 57.895 30.67 30.67 0.00 5.19
169 170 1.885850 GGTTGTGAAGTGGACGCGT 60.886 57.895 13.85 13.85 0.00 6.01
170 171 1.557443 GAGGTTGTGAAGTGGACGCG 61.557 60.000 3.53 3.53 0.00 6.01
171 172 0.249911 AGAGGTTGTGAAGTGGACGC 60.250 55.000 0.00 0.00 0.00 5.19
172 173 1.068588 TGAGAGGTTGTGAAGTGGACG 59.931 52.381 0.00 0.00 0.00 4.79
173 174 2.910688 TGAGAGGTTGTGAAGTGGAC 57.089 50.000 0.00 0.00 0.00 4.02
174 175 3.924114 TTTGAGAGGTTGTGAAGTGGA 57.076 42.857 0.00 0.00 0.00 4.02
175 176 4.981806 TTTTTGAGAGGTTGTGAAGTGG 57.018 40.909 0.00 0.00 0.00 4.00
193 194 5.245301 GGGGTTTGGAGTTGCTACTATTTTT 59.755 40.000 0.00 0.00 33.84 1.94
194 195 4.770531 GGGGTTTGGAGTTGCTACTATTTT 59.229 41.667 0.00 0.00 33.84 1.82
195 196 4.341487 GGGGTTTGGAGTTGCTACTATTT 58.659 43.478 0.00 0.00 33.84 1.40
196 197 3.308904 GGGGGTTTGGAGTTGCTACTATT 60.309 47.826 0.00 0.00 33.84 1.73
197 198 2.241430 GGGGGTTTGGAGTTGCTACTAT 59.759 50.000 0.00 0.00 33.84 2.12
198 199 1.631898 GGGGGTTTGGAGTTGCTACTA 59.368 52.381 0.00 0.00 33.84 1.82
199 200 0.404426 GGGGGTTTGGAGTTGCTACT 59.596 55.000 0.00 0.00 37.31 2.57
217 218 1.500512 TTGCTTCCGTTCGTTTCGGG 61.501 55.000 13.32 3.07 46.82 5.14
219 220 1.658968 CTTTGCTTCCGTTCGTTTCG 58.341 50.000 0.00 0.00 0.00 3.46
229 230 2.968206 CTGCTGGGCTTTGCTTCC 59.032 61.111 0.00 0.00 0.00 3.46
230 231 2.260743 GCTGCTGGGCTTTGCTTC 59.739 61.111 0.00 0.00 0.00 3.86
236 237 4.223125 TTGTGGGCTGCTGGGCTT 62.223 61.111 0.00 0.00 40.65 4.35
278 279 1.077265 CATGGGCCACTTTGGGTCT 59.923 57.895 9.28 0.00 38.19 3.85
279 280 1.984026 CCATGGGCCACTTTGGGTC 60.984 63.158 9.28 0.00 38.19 4.46
351 352 0.817634 TGGGACGCTTCAGTTGGTTG 60.818 55.000 0.00 0.00 0.00 3.77
353 354 1.227853 GTGGGACGCTTCAGTTGGT 60.228 57.895 0.00 0.00 35.02 3.67
363 364 1.001048 GTTTTTGGTTAGGTGGGACGC 60.001 52.381 0.00 0.00 38.67 5.19
365 366 2.363038 GGTGTTTTTGGTTAGGTGGGAC 59.637 50.000 0.00 0.00 0.00 4.46
366 367 2.668625 GGTGTTTTTGGTTAGGTGGGA 58.331 47.619 0.00 0.00 0.00 4.37
375 376 1.782028 GCTCTCGCGGTGTTTTTGGT 61.782 55.000 6.13 0.00 0.00 3.67
383 384 2.409651 GAGTAGGCTCTCGCGGTG 59.590 66.667 6.13 0.00 38.66 4.94
424 441 0.041684 CAGGGGCCATCCTCCTTTTT 59.958 55.000 4.39 0.00 34.31 1.94
425 442 1.699752 CAGGGGCCATCCTCCTTTT 59.300 57.895 4.39 0.00 34.31 2.27
426 443 3.001358 GCAGGGGCCATCCTCCTTT 62.001 63.158 4.39 0.00 34.31 3.11
427 444 3.424105 GCAGGGGCCATCCTCCTT 61.424 66.667 4.39 0.00 34.31 3.36
437 454 0.972883 CTAGATGTAGAGGCAGGGGC 59.027 60.000 0.00 0.00 40.13 5.80
438 455 2.685106 TCTAGATGTAGAGGCAGGGG 57.315 55.000 0.00 0.00 31.23 4.79
439 456 5.303971 CATTTTCTAGATGTAGAGGCAGGG 58.696 45.833 0.00 0.00 36.61 4.45
440 457 4.754114 GCATTTTCTAGATGTAGAGGCAGG 59.246 45.833 0.00 0.00 36.61 4.85
441 458 5.363101 TGCATTTTCTAGATGTAGAGGCAG 58.637 41.667 11.12 2.17 36.61 4.85
442 459 5.357742 TGCATTTTCTAGATGTAGAGGCA 57.642 39.130 11.12 11.12 36.61 4.75
443 460 6.090088 CGTATGCATTTTCTAGATGTAGAGGC 59.910 42.308 3.54 4.34 36.61 4.70
444 461 6.587990 CCGTATGCATTTTCTAGATGTAGAGG 59.412 42.308 3.54 0.00 36.61 3.69
445 462 7.148641 ACCGTATGCATTTTCTAGATGTAGAG 58.851 38.462 3.54 0.00 36.61 2.43
446 463 7.050970 ACCGTATGCATTTTCTAGATGTAGA 57.949 36.000 3.54 0.00 33.12 2.59
447 464 7.715265 AACCGTATGCATTTTCTAGATGTAG 57.285 36.000 3.54 0.00 0.00 2.74
448 465 8.418662 AGTAACCGTATGCATTTTCTAGATGTA 58.581 33.333 3.54 0.00 0.00 2.29
449 466 7.272978 AGTAACCGTATGCATTTTCTAGATGT 58.727 34.615 3.54 0.00 0.00 3.06
450 467 7.715265 AGTAACCGTATGCATTTTCTAGATG 57.285 36.000 3.54 0.00 0.00 2.90
451 468 8.732746 AAAGTAACCGTATGCATTTTCTAGAT 57.267 30.769 3.54 0.00 0.00 1.98
452 469 9.826574 ATAAAGTAACCGTATGCATTTTCTAGA 57.173 29.630 3.54 0.00 0.00 2.43
455 472 8.952278 TCAATAAAGTAACCGTATGCATTTTCT 58.048 29.630 3.54 0.00 0.00 2.52
456 473 9.730420 ATCAATAAAGTAACCGTATGCATTTTC 57.270 29.630 3.54 0.00 0.00 2.29
467 484 9.716507 CCTCAACAATAATCAATAAAGTAACCG 57.283 33.333 0.00 0.00 0.00 4.44
472 489 9.533831 AAGGTCCTCAACAATAATCAATAAAGT 57.466 29.630 0.00 0.00 0.00 2.66
506 523 9.131791 GGTGGATTCAGGTATATTGTTTGTAAT 57.868 33.333 0.00 0.00 0.00 1.89
507 524 8.110271 TGGTGGATTCAGGTATATTGTTTGTAA 58.890 33.333 0.00 0.00 0.00 2.41
508 525 7.634718 TGGTGGATTCAGGTATATTGTTTGTA 58.365 34.615 0.00 0.00 0.00 2.41
509 526 6.489603 TGGTGGATTCAGGTATATTGTTTGT 58.510 36.000 0.00 0.00 0.00 2.83
510 527 7.503566 AGATGGTGGATTCAGGTATATTGTTTG 59.496 37.037 0.00 0.00 0.00 2.93
511 528 7.586349 AGATGGTGGATTCAGGTATATTGTTT 58.414 34.615 0.00 0.00 0.00 2.83
512 529 7.154191 AGATGGTGGATTCAGGTATATTGTT 57.846 36.000 0.00 0.00 0.00 2.83
513 530 6.770286 AGATGGTGGATTCAGGTATATTGT 57.230 37.500 0.00 0.00 0.00 2.71
514 531 7.173907 GTCAAGATGGTGGATTCAGGTATATTG 59.826 40.741 0.00 0.00 0.00 1.90
515 532 7.147320 TGTCAAGATGGTGGATTCAGGTATATT 60.147 37.037 0.00 0.00 0.00 1.28
516 533 6.329986 TGTCAAGATGGTGGATTCAGGTATAT 59.670 38.462 0.00 0.00 0.00 0.86
517 534 5.665360 TGTCAAGATGGTGGATTCAGGTATA 59.335 40.000 0.00 0.00 0.00 1.47
518 535 4.474651 TGTCAAGATGGTGGATTCAGGTAT 59.525 41.667 0.00 0.00 0.00 2.73
519 536 3.843619 TGTCAAGATGGTGGATTCAGGTA 59.156 43.478 0.00 0.00 0.00 3.08
520 537 2.644299 TGTCAAGATGGTGGATTCAGGT 59.356 45.455 0.00 0.00 0.00 4.00
521 538 3.354948 TGTCAAGATGGTGGATTCAGG 57.645 47.619 0.00 0.00 0.00 3.86
522 539 4.074259 TGTTGTCAAGATGGTGGATTCAG 58.926 43.478 0.00 0.00 0.00 3.02
523 540 4.097551 TGTTGTCAAGATGGTGGATTCA 57.902 40.909 0.00 0.00 0.00 2.57
524 541 6.949352 ATATGTTGTCAAGATGGTGGATTC 57.051 37.500 5.49 0.00 0.00 2.52
525 542 6.772716 GGTATATGTTGTCAAGATGGTGGATT 59.227 38.462 5.49 0.00 0.00 3.01
526 543 6.299141 GGTATATGTTGTCAAGATGGTGGAT 58.701 40.000 5.49 0.00 0.00 3.41
527 544 5.680619 GGTATATGTTGTCAAGATGGTGGA 58.319 41.667 5.49 0.00 0.00 4.02
528 545 4.511454 CGGTATATGTTGTCAAGATGGTGG 59.489 45.833 5.49 0.00 0.00 4.61
529 546 4.024893 GCGGTATATGTTGTCAAGATGGTG 60.025 45.833 5.49 0.00 0.00 4.17
530 547 4.127171 GCGGTATATGTTGTCAAGATGGT 58.873 43.478 5.49 0.00 0.00 3.55
531 548 4.380531 AGCGGTATATGTTGTCAAGATGG 58.619 43.478 5.49 0.00 0.00 3.51
532 549 7.600375 AGAATAGCGGTATATGTTGTCAAGATG 59.400 37.037 7.69 0.00 0.00 2.90
533 550 7.671302 AGAATAGCGGTATATGTTGTCAAGAT 58.329 34.615 7.69 0.37 0.00 2.40
534 551 7.050970 AGAATAGCGGTATATGTTGTCAAGA 57.949 36.000 7.69 0.00 0.00 3.02
535 552 7.715265 AAGAATAGCGGTATATGTTGTCAAG 57.285 36.000 7.69 0.00 0.00 3.02
536 553 9.419297 GATAAGAATAGCGGTATATGTTGTCAA 57.581 33.333 7.69 0.00 0.00 3.18
537 554 8.033038 GGATAAGAATAGCGGTATATGTTGTCA 58.967 37.037 7.69 0.00 0.00 3.58
538 555 8.033038 TGGATAAGAATAGCGGTATATGTTGTC 58.967 37.037 7.69 9.02 0.00 3.18
539 556 7.903145 TGGATAAGAATAGCGGTATATGTTGT 58.097 34.615 7.69 0.59 0.00 3.32
540 557 8.771920 TTGGATAAGAATAGCGGTATATGTTG 57.228 34.615 7.69 0.00 0.00 3.33
541 558 9.959721 ATTTGGATAAGAATAGCGGTATATGTT 57.040 29.630 7.69 4.66 0.00 2.71
542 559 9.383519 CATTTGGATAAGAATAGCGGTATATGT 57.616 33.333 7.69 0.00 0.00 2.29
543 560 9.599866 TCATTTGGATAAGAATAGCGGTATATG 57.400 33.333 7.69 4.23 0.00 1.78
545 562 9.599866 CATCATTTGGATAAGAATAGCGGTATA 57.400 33.333 7.69 0.00 33.95 1.47
546 563 8.321353 TCATCATTTGGATAAGAATAGCGGTAT 58.679 33.333 0.16 0.16 33.95 2.73
547 564 7.676004 TCATCATTTGGATAAGAATAGCGGTA 58.324 34.615 0.00 0.00 33.95 4.02
548 565 6.533730 TCATCATTTGGATAAGAATAGCGGT 58.466 36.000 0.00 0.00 33.95 5.68
549 566 7.361542 CCTTCATCATTTGGATAAGAATAGCGG 60.362 40.741 0.00 0.00 33.95 5.52
550 567 7.361542 CCCTTCATCATTTGGATAAGAATAGCG 60.362 40.741 0.00 0.00 33.95 4.26
551 568 7.667219 TCCCTTCATCATTTGGATAAGAATAGC 59.333 37.037 0.00 0.00 33.95 2.97
552 569 9.750783 ATCCCTTCATCATTTGGATAAGAATAG 57.249 33.333 0.00 0.00 34.12 1.73
553 570 9.524496 CATCCCTTCATCATTTGGATAAGAATA 57.476 33.333 0.00 0.00 34.12 1.75
554 571 7.039223 GCATCCCTTCATCATTTGGATAAGAAT 60.039 37.037 0.00 0.00 34.12 2.40
555 572 6.266103 GCATCCCTTCATCATTTGGATAAGAA 59.734 38.462 0.00 0.00 34.12 2.52
556 573 5.771666 GCATCCCTTCATCATTTGGATAAGA 59.228 40.000 0.00 0.00 34.12 2.10
557 574 5.773680 AGCATCCCTTCATCATTTGGATAAG 59.226 40.000 0.00 0.00 34.12 1.73
558 575 5.708544 AGCATCCCTTCATCATTTGGATAA 58.291 37.500 0.00 0.00 34.12 1.75
559 576 5.329191 AGCATCCCTTCATCATTTGGATA 57.671 39.130 0.00 0.00 34.12 2.59
560 577 4.194678 AGCATCCCTTCATCATTTGGAT 57.805 40.909 0.00 0.00 36.26 3.41
561 578 3.675348 AGCATCCCTTCATCATTTGGA 57.325 42.857 0.00 0.00 0.00 3.53
562 579 3.255149 GCTAGCATCCCTTCATCATTTGG 59.745 47.826 10.63 0.00 0.00 3.28
563 580 4.023107 CAGCTAGCATCCCTTCATCATTTG 60.023 45.833 18.83 0.00 0.00 2.32
564 581 4.142790 CAGCTAGCATCCCTTCATCATTT 58.857 43.478 18.83 0.00 0.00 2.32
565 582 3.498121 CCAGCTAGCATCCCTTCATCATT 60.498 47.826 18.83 0.00 0.00 2.57
566 583 2.040012 CCAGCTAGCATCCCTTCATCAT 59.960 50.000 18.83 0.00 0.00 2.45
567 584 1.419012 CCAGCTAGCATCCCTTCATCA 59.581 52.381 18.83 0.00 0.00 3.07
568 585 1.271271 CCCAGCTAGCATCCCTTCATC 60.271 57.143 18.83 0.00 0.00 2.92
569 586 0.769873 CCCAGCTAGCATCCCTTCAT 59.230 55.000 18.83 0.00 0.00 2.57
570 587 0.621571 ACCCAGCTAGCATCCCTTCA 60.622 55.000 18.83 0.00 0.00 3.02
571 588 0.107643 GACCCAGCTAGCATCCCTTC 59.892 60.000 18.83 1.44 0.00 3.46
572 589 0.621571 TGACCCAGCTAGCATCCCTT 60.622 55.000 18.83 0.00 0.00 3.95
573 590 1.003442 TGACCCAGCTAGCATCCCT 59.997 57.895 18.83 0.00 0.00 4.20
574 591 1.147153 GTGACCCAGCTAGCATCCC 59.853 63.158 18.83 2.41 0.00 3.85
575 592 1.069358 GTAGTGACCCAGCTAGCATCC 59.931 57.143 18.83 1.67 0.00 3.51
576 593 1.069358 GGTAGTGACCCAGCTAGCATC 59.931 57.143 18.83 9.25 40.23 3.91
577 594 1.123928 GGTAGTGACCCAGCTAGCAT 58.876 55.000 18.83 0.00 40.23 3.79
578 595 2.591915 GGTAGTGACCCAGCTAGCA 58.408 57.895 18.83 0.00 40.23 3.49
587 604 1.418637 TGAGTGGTTTGGGTAGTGACC 59.581 52.381 0.00 0.00 46.13 4.02
588 605 2.490991 GTGAGTGGTTTGGGTAGTGAC 58.509 52.381 0.00 0.00 0.00 3.67
589 606 1.418637 GGTGAGTGGTTTGGGTAGTGA 59.581 52.381 0.00 0.00 0.00 3.41
590 607 1.420138 AGGTGAGTGGTTTGGGTAGTG 59.580 52.381 0.00 0.00 0.00 2.74
591 608 1.815757 AGGTGAGTGGTTTGGGTAGT 58.184 50.000 0.00 0.00 0.00 2.73
592 609 3.868754 GCTTAGGTGAGTGGTTTGGGTAG 60.869 52.174 0.00 0.00 0.00 3.18
593 610 2.039348 GCTTAGGTGAGTGGTTTGGGTA 59.961 50.000 0.00 0.00 0.00 3.69
594 611 1.202891 GCTTAGGTGAGTGGTTTGGGT 60.203 52.381 0.00 0.00 0.00 4.51
595 612 1.073923 AGCTTAGGTGAGTGGTTTGGG 59.926 52.381 0.00 0.00 0.00 4.12
596 613 2.568623 AGCTTAGGTGAGTGGTTTGG 57.431 50.000 0.00 0.00 0.00 3.28
597 614 4.819630 TGTTAAGCTTAGGTGAGTGGTTTG 59.180 41.667 6.24 0.00 0.00 2.93
598 615 5.043737 TGTTAAGCTTAGGTGAGTGGTTT 57.956 39.130 6.24 0.00 0.00 3.27
599 616 4.699925 TGTTAAGCTTAGGTGAGTGGTT 57.300 40.909 6.24 0.00 0.00 3.67
600 617 4.286032 TGATGTTAAGCTTAGGTGAGTGGT 59.714 41.667 6.24 0.00 0.00 4.16
601 618 4.832248 TGATGTTAAGCTTAGGTGAGTGG 58.168 43.478 6.24 0.00 0.00 4.00
602 619 6.801539 TTTGATGTTAAGCTTAGGTGAGTG 57.198 37.500 6.24 0.00 0.00 3.51
603 620 6.072452 GCTTTTGATGTTAAGCTTAGGTGAGT 60.072 38.462 6.24 0.00 42.62 3.41
604 621 6.317857 GCTTTTGATGTTAAGCTTAGGTGAG 58.682 40.000 6.24 0.53 42.62 3.51
605 622 5.183140 GGCTTTTGATGTTAAGCTTAGGTGA 59.817 40.000 6.24 0.00 44.70 4.02
606 623 5.402398 GGCTTTTGATGTTAAGCTTAGGTG 58.598 41.667 6.24 0.00 44.70 4.00
607 624 4.156008 CGGCTTTTGATGTTAAGCTTAGGT 59.844 41.667 6.24 0.00 44.70 3.08
608 625 4.438744 CCGGCTTTTGATGTTAAGCTTAGG 60.439 45.833 6.24 0.00 44.70 2.69
609 626 4.394920 TCCGGCTTTTGATGTTAAGCTTAG 59.605 41.667 6.24 0.00 44.70 2.18
610 627 4.328536 TCCGGCTTTTGATGTTAAGCTTA 58.671 39.130 0.86 0.86 44.70 3.09
611 628 3.153919 TCCGGCTTTTGATGTTAAGCTT 58.846 40.909 3.48 3.48 44.70 3.74
612 629 2.790433 TCCGGCTTTTGATGTTAAGCT 58.210 42.857 0.00 0.00 44.70 3.74
613 630 3.501950 CTTCCGGCTTTTGATGTTAAGC 58.498 45.455 0.00 0.00 44.62 3.09
614 631 3.501950 GCTTCCGGCTTTTGATGTTAAG 58.498 45.455 0.00 0.00 38.06 1.85
615 632 2.230266 GGCTTCCGGCTTTTGATGTTAA 59.770 45.455 0.00 0.00 41.46 2.01
616 633 1.816224 GGCTTCCGGCTTTTGATGTTA 59.184 47.619 0.00 0.00 41.46 2.41
617 634 0.603065 GGCTTCCGGCTTTTGATGTT 59.397 50.000 0.00 0.00 41.46 2.71
618 635 0.251341 AGGCTTCCGGCTTTTGATGT 60.251 50.000 0.00 0.00 44.74 3.06
619 636 2.571548 AGGCTTCCGGCTTTTGATG 58.428 52.632 0.00 0.00 44.74 3.07
634 651 1.587547 GTATGTGGCTTAGCTGAGGC 58.412 55.000 23.34 23.34 42.15 4.70
635 652 1.539065 CGGTATGTGGCTTAGCTGAGG 60.539 57.143 7.72 0.00 0.00 3.86
636 653 1.137086 ACGGTATGTGGCTTAGCTGAG 59.863 52.381 3.59 0.05 0.00 3.35
637 654 1.134818 CACGGTATGTGGCTTAGCTGA 60.135 52.381 3.59 0.00 45.21 4.26
638 655 1.290203 CACGGTATGTGGCTTAGCTG 58.710 55.000 3.59 0.00 45.21 4.24
639 656 3.760693 CACGGTATGTGGCTTAGCT 57.239 52.632 3.59 0.00 45.21 3.32
649 666 0.756294 TATGCCCCAGACACGGTATG 59.244 55.000 0.00 0.00 0.00 2.39
650 667 1.502690 TTATGCCCCAGACACGGTAT 58.497 50.000 0.00 0.00 0.00 2.73
651 668 1.414919 GATTATGCCCCAGACACGGTA 59.585 52.381 0.00 0.00 0.00 4.02
652 669 0.180406 GATTATGCCCCAGACACGGT 59.820 55.000 0.00 0.00 0.00 4.83
653 670 0.469917 AGATTATGCCCCAGACACGG 59.530 55.000 0.00 0.00 0.00 4.94
654 671 1.586422 CAGATTATGCCCCAGACACG 58.414 55.000 0.00 0.00 0.00 4.49
655 672 1.212935 ACCAGATTATGCCCCAGACAC 59.787 52.381 0.00 0.00 0.00 3.67
656 673 1.490490 GACCAGATTATGCCCCAGACA 59.510 52.381 0.00 0.00 0.00 3.41
657 674 1.490490 TGACCAGATTATGCCCCAGAC 59.510 52.381 0.00 0.00 0.00 3.51
658 675 1.770658 CTGACCAGATTATGCCCCAGA 59.229 52.381 0.00 0.00 0.00 3.86
659 676 1.770658 TCTGACCAGATTATGCCCCAG 59.229 52.381 0.00 0.00 31.41 4.45
660 677 1.490490 GTCTGACCAGATTATGCCCCA 59.510 52.381 2.78 0.00 39.97 4.96
661 678 1.541233 CGTCTGACCAGATTATGCCCC 60.541 57.143 2.78 0.00 39.97 5.80
662 679 1.871080 CGTCTGACCAGATTATGCCC 58.129 55.000 2.78 0.00 39.97 5.36
663 680 1.221414 GCGTCTGACCAGATTATGCC 58.779 55.000 2.78 0.00 39.97 4.40
664 681 1.594862 GTGCGTCTGACCAGATTATGC 59.405 52.381 2.78 6.34 39.97 3.14
665 682 3.119291 GAGTGCGTCTGACCAGATTATG 58.881 50.000 2.78 0.00 39.97 1.90
666 683 2.223595 CGAGTGCGTCTGACCAGATTAT 60.224 50.000 2.78 0.00 39.97 1.28
667 684 1.132453 CGAGTGCGTCTGACCAGATTA 59.868 52.381 2.78 0.00 39.97 1.75
668 685 0.109086 CGAGTGCGTCTGACCAGATT 60.109 55.000 2.78 0.00 39.97 2.40
669 686 1.508545 CGAGTGCGTCTGACCAGAT 59.491 57.895 2.78 0.00 39.97 2.90
670 687 2.954611 CGAGTGCGTCTGACCAGA 59.045 61.111 1.55 0.00 34.56 3.86
671 688 2.807045 GCGAGTGCGTCTGACCAG 60.807 66.667 1.55 0.00 40.36 4.00
694 711 3.195698 GTGGAAGATGGCGGCGAC 61.196 66.667 12.98 9.31 0.00 5.19
695 712 2.739849 TTTGTGGAAGATGGCGGCGA 62.740 55.000 12.98 0.00 0.00 5.54
696 713 1.656818 ATTTGTGGAAGATGGCGGCG 61.657 55.000 0.51 0.51 0.00 6.46
697 714 0.532115 AATTTGTGGAAGATGGCGGC 59.468 50.000 0.00 0.00 0.00 6.53
698 715 1.202177 CGAATTTGTGGAAGATGGCGG 60.202 52.381 0.00 0.00 0.00 6.13
699 716 1.468520 ACGAATTTGTGGAAGATGGCG 59.531 47.619 0.00 0.00 0.00 5.69
700 717 3.575965 AACGAATTTGTGGAAGATGGC 57.424 42.857 0.00 0.00 0.00 4.40
701 718 5.527951 TGAAAACGAATTTGTGGAAGATGG 58.472 37.500 0.00 0.00 0.00 3.51
702 719 6.437928 TCTGAAAACGAATTTGTGGAAGATG 58.562 36.000 0.00 0.00 0.00 2.90
703 720 6.633500 TCTGAAAACGAATTTGTGGAAGAT 57.367 33.333 0.00 0.00 0.00 2.40
704 721 6.633500 ATCTGAAAACGAATTTGTGGAAGA 57.367 33.333 0.00 1.71 0.00 2.87
705 722 8.970691 ATAATCTGAAAACGAATTTGTGGAAG 57.029 30.769 0.00 0.00 0.00 3.46
728 745 9.547753 GTCAGGCAAGATAGAAGTTTCAATATA 57.452 33.333 0.00 0.00 0.00 0.86
729 746 7.500559 GGTCAGGCAAGATAGAAGTTTCAATAT 59.499 37.037 0.00 0.00 0.00 1.28
730 747 6.823689 GGTCAGGCAAGATAGAAGTTTCAATA 59.176 38.462 0.00 0.00 0.00 1.90
731 748 5.649831 GGTCAGGCAAGATAGAAGTTTCAAT 59.350 40.000 0.00 0.00 0.00 2.57
732 749 5.003804 GGTCAGGCAAGATAGAAGTTTCAA 58.996 41.667 0.00 0.00 0.00 2.69
733 750 4.041567 TGGTCAGGCAAGATAGAAGTTTCA 59.958 41.667 0.00 0.00 0.00 2.69
734 751 4.393371 GTGGTCAGGCAAGATAGAAGTTTC 59.607 45.833 0.00 0.00 0.00 2.78
735 752 4.042187 AGTGGTCAGGCAAGATAGAAGTTT 59.958 41.667 0.00 0.00 0.00 2.66
736 753 3.584848 AGTGGTCAGGCAAGATAGAAGTT 59.415 43.478 0.00 0.00 0.00 2.66
737 754 3.177228 AGTGGTCAGGCAAGATAGAAGT 58.823 45.455 0.00 0.00 0.00 3.01
738 755 3.450457 AGAGTGGTCAGGCAAGATAGAAG 59.550 47.826 0.00 0.00 0.00 2.85
739 756 3.445008 AGAGTGGTCAGGCAAGATAGAA 58.555 45.455 0.00 0.00 0.00 2.10
740 757 3.107402 AGAGTGGTCAGGCAAGATAGA 57.893 47.619 0.00 0.00 0.00 1.98
741 758 3.068873 GGTAGAGTGGTCAGGCAAGATAG 59.931 52.174 0.00 0.00 0.00 2.08
742 759 3.031736 GGTAGAGTGGTCAGGCAAGATA 58.968 50.000 0.00 0.00 0.00 1.98
743 760 1.834263 GGTAGAGTGGTCAGGCAAGAT 59.166 52.381 0.00 0.00 0.00 2.40
744 761 1.267121 GGTAGAGTGGTCAGGCAAGA 58.733 55.000 0.00 0.00 0.00 3.02
745 762 0.976641 TGGTAGAGTGGTCAGGCAAG 59.023 55.000 0.00 0.00 0.00 4.01
746 763 1.656587 ATGGTAGAGTGGTCAGGCAA 58.343 50.000 0.00 0.00 0.00 4.52
747 764 1.278985 CAATGGTAGAGTGGTCAGGCA 59.721 52.381 0.00 0.00 0.00 4.75
748 765 1.555075 TCAATGGTAGAGTGGTCAGGC 59.445 52.381 0.00 0.00 0.00 4.85
749 766 3.198635 ACATCAATGGTAGAGTGGTCAGG 59.801 47.826 0.00 0.00 0.00 3.86
750 767 4.081476 TGACATCAATGGTAGAGTGGTCAG 60.081 45.833 0.00 0.00 0.00 3.51
751 768 3.837731 TGACATCAATGGTAGAGTGGTCA 59.162 43.478 0.00 0.00 0.00 4.02
752 769 4.184629 GTGACATCAATGGTAGAGTGGTC 58.815 47.826 0.00 0.00 0.00 4.02
753 770 3.055094 GGTGACATCAATGGTAGAGTGGT 60.055 47.826 0.00 0.00 0.00 4.16
754 771 3.055167 TGGTGACATCAATGGTAGAGTGG 60.055 47.826 0.00 0.00 33.40 4.00
755 772 4.206477 TGGTGACATCAATGGTAGAGTG 57.794 45.455 0.00 0.00 33.40 3.51
770 787 4.176752 GCGGGAGGGGATGGTGAC 62.177 72.222 0.00 0.00 0.00 3.67
771 788 4.731853 TGCGGGAGGGGATGGTGA 62.732 66.667 0.00 0.00 0.00 4.02
772 789 4.489771 GTGCGGGAGGGGATGGTG 62.490 72.222 0.00 0.00 0.00 4.17
774 791 3.492353 ATGTGCGGGAGGGGATGG 61.492 66.667 0.00 0.00 0.00 3.51
775 792 2.203252 CATGTGCGGGAGGGGATG 60.203 66.667 0.00 0.00 0.00 3.51
776 793 3.492353 CCATGTGCGGGAGGGGAT 61.492 66.667 0.00 0.00 0.00 3.85
780 797 4.720902 TGTGCCATGTGCGGGAGG 62.721 66.667 0.00 0.00 45.60 4.30
781 798 2.438975 ATGTGCCATGTGCGGGAG 60.439 61.111 0.00 0.00 45.60 4.30
782 799 2.438254 GATGTGCCATGTGCGGGA 60.438 61.111 0.00 0.00 45.60 5.14
783 800 3.879682 CGATGTGCCATGTGCGGG 61.880 66.667 0.00 0.00 45.60 6.13
784 801 2.397754 TTCGATGTGCCATGTGCGG 61.398 57.895 0.00 0.00 45.60 5.69
785 802 1.226101 GTTCGATGTGCCATGTGCG 60.226 57.895 0.00 0.00 45.60 5.34
786 803 0.523072 AAGTTCGATGTGCCATGTGC 59.477 50.000 0.00 0.00 41.77 4.57
787 804 1.805943 TGAAGTTCGATGTGCCATGTG 59.194 47.619 0.00 0.00 0.00 3.21
788 805 1.806542 GTGAAGTTCGATGTGCCATGT 59.193 47.619 0.00 0.00 0.00 3.21
802 820 0.034059 CAGCCGGAGTGAAGTGAAGT 59.966 55.000 5.05 0.00 0.00 3.01
864 884 2.533463 GGATGGGATGGGAGGGAGC 61.533 68.421 0.00 0.00 0.00 4.70
884 904 1.778484 AGCATGTGATGGATGGATGGA 59.222 47.619 0.00 0.00 0.00 3.41
885 905 2.287977 AGCATGTGATGGATGGATGG 57.712 50.000 0.00 0.00 0.00 3.51
886 906 3.190744 GCTAAGCATGTGATGGATGGATG 59.809 47.826 0.00 0.00 0.00 3.51
887 907 3.074094 AGCTAAGCATGTGATGGATGGAT 59.926 43.478 0.00 0.00 0.00 3.41
899 919 6.346120 CGGCGCTTTATATATAGCTAAGCATG 60.346 42.308 20.09 10.79 40.83 4.06
904 924 4.365723 GGCGGCGCTTTATATATAGCTAA 58.634 43.478 32.30 0.00 35.25 3.09
915 935 2.862674 AAAGATCCGGCGGCGCTTTA 62.863 55.000 30.68 16.99 29.14 1.85
916 936 4.778143 AAGATCCGGCGGCGCTTT 62.778 61.111 32.30 12.42 0.00 3.51
1230 1272 4.373116 TCGAAGGTGCCGAGCCAC 62.373 66.667 0.00 0.00 35.00 5.01
1497 1539 2.038557 GAGGTGGTAAGGAGAGTTTGCA 59.961 50.000 0.00 0.00 0.00 4.08
1513 1555 5.008019 CGAATTCTAAACCATCCATGAGGTG 59.992 44.000 3.52 0.00 38.37 4.00
1527 1569 4.016444 AGCCCTGCATTTCGAATTCTAAA 58.984 39.130 7.51 7.51 0.00 1.85
1530 1572 2.134789 AGCCCTGCATTTCGAATTCT 57.865 45.000 0.00 0.00 0.00 2.40
1575 1617 2.203070 ATTGGCGGTGGCTCGATC 60.203 61.111 5.12 0.00 39.81 3.69
1738 1780 0.179032 CACACCACAAGTACAGGGCA 60.179 55.000 0.00 0.00 0.00 5.36
1740 1782 3.478857 TTACACACCACAAGTACAGGG 57.521 47.619 0.00 0.00 0.00 4.45
1857 1968 4.083484 CGGACGAGTAAAGGCTTGAATTTT 60.083 41.667 0.00 0.00 0.00 1.82
1877 1988 7.223584 TCAAAGCAGGAAATATATGAATCGGA 58.776 34.615 0.00 0.00 0.00 4.55
1920 2031 1.079819 GACAGCGCAAGAGCCTGTA 60.080 57.895 11.47 0.00 45.77 2.74
2301 2428 4.083431 GCATGATCATCCACTACATCTTGC 60.083 45.833 4.86 0.00 38.49 4.01
2310 2437 2.125233 ACTCCAGCATGATCATCCACT 58.875 47.619 4.86 0.74 39.69 4.00
2364 2491 4.349503 AATGGCACGGCTGCTCCA 62.350 61.111 8.59 8.59 43.66 3.86
2414 2541 0.109342 CACCTGTTCTGGAACTGCCT 59.891 55.000 13.54 0.74 41.67 4.75
2613 2740 2.355108 GCATACCAGGCTCAGTTTCAGA 60.355 50.000 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.