Multiple sequence alignment - TraesCS2A01G399300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G399300 chr2A 100.000 2366 0 0 1 2366 652521170 652518805 0.000000e+00 4370.0
1 TraesCS2A01G399300 chr2A 80.000 285 45 11 1767 2044 1512585 1512306 1.430000e-47 200.0
2 TraesCS2A01G399300 chr2A 95.714 70 3 0 485 554 707207486 707207417 1.920000e-21 113.0
3 TraesCS2A01G399300 chr2D 88.562 1224 69 26 561 1743 508048138 508046945 0.000000e+00 1419.0
4 TraesCS2A01G399300 chr2D 85.977 435 24 22 1 404 531342020 531341592 4.670000e-117 431.0
5 TraesCS2A01G399300 chr2D 92.742 248 15 3 2112 2359 508046795 508046551 2.890000e-94 355.0
6 TraesCS2A01G399300 chr2D 91.339 254 18 3 1 252 595259563 595259814 6.260000e-91 344.0
7 TraesCS2A01G399300 chr2D 85.259 251 32 4 1796 2044 543821654 543821901 1.090000e-63 254.0
8 TraesCS2A01G399300 chr2D 94.444 72 4 0 481 552 458717110 458717039 6.910000e-21 111.0
9 TraesCS2A01G399300 chr2D 93.333 60 4 0 2044 2103 508046911 508046852 3.240000e-14 89.8
10 TraesCS2A01G399300 chr2B 93.936 940 38 8 658 1594 596898758 596897835 0.000000e+00 1402.0
11 TraesCS2A01G399300 chr2B 93.902 328 11 4 2044 2364 596896149 596895824 9.830000e-134 486.0
12 TraesCS2A01G399300 chr2B 90.196 255 19 5 1 252 798972586 798972335 6.310000e-86 327.0
13 TraesCS2A01G399300 chr2B 90.196 255 19 5 1 252 800171347 800171598 6.310000e-86 327.0
14 TraesCS2A01G399300 chr2B 91.613 155 10 3 257 410 800171634 800171786 6.630000e-51 211.0
15 TraesCS2A01G399300 chr2B 88.667 150 15 2 1580 1729 596896305 596896158 5.190000e-42 182.0
16 TraesCS2A01G399300 chr2B 87.500 88 9 2 479 566 84813155 84813070 1.500000e-17 100.0
17 TraesCS2A01G399300 chr6A 90.526 285 19 5 1768 2045 572150046 572149763 1.030000e-98 370.0
18 TraesCS2A01G399300 chr6A 94.444 72 4 0 481 552 535373351 535373280 6.910000e-21 111.0
19 TraesCS2A01G399300 chr7B 89.399 283 26 3 1765 2044 667195744 667195463 1.040000e-93 353.0
20 TraesCS2A01G399300 chr3D 89.643 280 22 4 1765 2042 40004472 40004746 1.350000e-92 350.0
21 TraesCS2A01G399300 chr3D 87.654 81 6 4 329 408 225845353 225845276 9.010000e-15 91.6
22 TraesCS2A01G399300 chr5A 88.889 279 23 2 1775 2045 318269729 318270007 1.050000e-88 337.0
23 TraesCS2A01G399300 chr5A 94.595 74 4 0 481 554 10215416 10215489 5.340000e-22 115.0
24 TraesCS2A01G399300 chr5B 89.344 244 24 2 1765 2006 626422149 626422392 2.950000e-79 305.0
25 TraesCS2A01G399300 chr5B 95.775 71 3 0 485 555 639920826 639920756 5.340000e-22 115.0
26 TraesCS2A01G399300 chr4B 85.878 262 27 7 1767 2022 552752280 552752023 1.080000e-68 270.0
27 TraesCS2A01G399300 chr7A 89.041 219 19 3 1765 1979 632382637 632382854 1.390000e-67 267.0
28 TraesCS2A01G399300 chr1B 81.119 286 45 6 1750 2030 31121548 31121829 1.100000e-53 220.0
29 TraesCS2A01G399300 chr1B 94.231 52 0 3 358 408 643949936 643949887 2.520000e-10 76.8
30 TraesCS2A01G399300 chrUn 94.805 77 3 1 485 561 41923619 41923694 4.130000e-23 119.0
31 TraesCS2A01G399300 chrUn 94.286 70 4 0 481 550 69201365 69201296 8.940000e-20 108.0
32 TraesCS2A01G399300 chr4D 97.059 68 2 0 485 552 52766645 52766578 5.340000e-22 115.0
33 TraesCS2A01G399300 chr4D 94.203 69 4 0 485 553 426600367 426600299 3.220000e-19 106.0
34 TraesCS2A01G399300 chr7D 95.714 70 3 0 485 554 40617281 40617212 1.920000e-21 113.0
35 TraesCS2A01G399300 chr1D 93.333 75 5 0 481 555 409574443 409574369 6.910000e-21 111.0
36 TraesCS2A01G399300 chr1D 93.243 74 4 1 481 554 291543059 291543131 8.940000e-20 108.0
37 TraesCS2A01G399300 chr1D 93.151 73 5 0 482 554 479556451 479556523 8.940000e-20 108.0
38 TraesCS2A01G399300 chr1D 94.203 69 4 0 482 550 299573265 299573333 3.220000e-19 106.0
39 TraesCS2A01G399300 chr1D 87.654 81 6 3 329 408 64209613 64209690 9.010000e-15 91.6
40 TraesCS2A01G399300 chr6D 94.366 71 4 0 482 552 107938671 107938741 2.490000e-20 110.0
41 TraesCS2A01G399300 chr6D 94.118 68 4 0 485 552 42087194 42087127 1.160000e-18 104.0
42 TraesCS2A01G399300 chr6D 92.958 71 5 0 482 552 68859468 68859538 1.160000e-18 104.0
43 TraesCS2A01G399300 chr6D 94.118 68 4 0 485 552 411183767 411183700 1.160000e-18 104.0
44 TraesCS2A01G399300 chr6D 91.667 72 6 0 481 552 331681309 331681238 1.500000e-17 100.0
45 TraesCS2A01G399300 chr6D 93.939 66 4 0 487 552 457742315 457742250 1.500000e-17 100.0
46 TraesCS2A01G399300 chr6D 92.537 67 5 0 486 552 163345026 163345092 1.940000e-16 97.1
47 TraesCS2A01G399300 chr6D 88.333 60 7 0 337 396 284668347 284668406 3.260000e-09 73.1
48 TraesCS2A01G399300 chr5D 94.366 71 4 0 482 552 366736101 366736171 2.490000e-20 110.0
49 TraesCS2A01G399300 chr5D 93.243 74 5 0 481 554 460451364 460451437 2.490000e-20 110.0
50 TraesCS2A01G399300 chr5D 95.588 68 3 0 485 552 560286196 560286129 2.490000e-20 110.0
51 TraesCS2A01G399300 chr3A 90.244 82 2 5 329 408 16671687 16671764 4.160000e-18 102.0
52 TraesCS2A01G399300 chr3A 90.123 81 3 4 329 408 142906472 142906548 1.500000e-17 100.0
53 TraesCS2A01G399300 chr3A 91.803 61 2 3 351 410 723314896 723314838 5.420000e-12 82.4
54 TraesCS2A01G399300 chr3A 84.270 89 3 8 326 408 727994834 727994751 2.520000e-10 76.8
55 TraesCS2A01G399300 chr4A 91.803 61 2 3 351 410 712212656 712212714 5.420000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G399300 chr2A 652518805 652521170 2365 True 4370.000000 4370 100.000000 1 2366 1 chr2A.!!$R2 2365
1 TraesCS2A01G399300 chr2D 508046551 508048138 1587 True 621.266667 1419 91.545667 561 2359 3 chr2D.!!$R3 1798
2 TraesCS2A01G399300 chr2B 596895824 596898758 2934 True 690.000000 1402 92.168333 658 2364 3 chr2B.!!$R3 1706

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
509 510 0.028374 AAACGGACAAAAAGCGGACG 59.972 50.0 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1930 3526 0.108424 CCTCCGAAAGACTGAGCCAG 60.108 60.0 1.16 1.16 37.52 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.146479 TGAAATCGATGGACAATCTGAATTAG 57.854 34.615 0.00 0.00 32.61 1.73
26 27 6.551385 AATCGATGGACAATCTGAATTAGC 57.449 37.500 0.00 0.00 32.61 3.09
27 28 5.022282 TCGATGGACAATCTGAATTAGCA 57.978 39.130 0.00 0.00 32.61 3.49
28 29 5.427378 TCGATGGACAATCTGAATTAGCAA 58.573 37.500 0.00 0.00 32.61 3.91
29 30 5.879777 TCGATGGACAATCTGAATTAGCAAA 59.120 36.000 0.00 0.00 32.61 3.68
30 31 6.037500 TCGATGGACAATCTGAATTAGCAAAG 59.962 38.462 0.00 0.00 32.61 2.77
31 32 6.037500 CGATGGACAATCTGAATTAGCAAAGA 59.962 38.462 0.00 0.00 32.61 2.52
32 33 7.414429 CGATGGACAATCTGAATTAGCAAAGAA 60.414 37.037 0.00 0.00 32.61 2.52
33 34 7.523293 TGGACAATCTGAATTAGCAAAGAAA 57.477 32.000 0.00 0.00 0.00 2.52
34 35 8.125978 TGGACAATCTGAATTAGCAAAGAAAT 57.874 30.769 0.00 0.00 0.00 2.17
35 36 8.587608 TGGACAATCTGAATTAGCAAAGAAATT 58.412 29.630 0.00 0.00 0.00 1.82
81 82 3.597162 GCACCGTATGCGTAGTCG 58.403 61.111 1.69 0.00 46.55 4.18
97 98 2.391821 CGCGATGACACAAGCGTC 59.608 61.111 0.00 0.00 46.48 5.19
98 99 2.391821 GCGATGACACAAGCGTCG 59.608 61.111 0.00 0.00 45.03 5.12
99 100 3.071459 GCGATGACACAAGCGTCGG 62.071 63.158 0.00 0.00 43.11 4.79
100 101 2.778679 GATGACACAAGCGTCGGC 59.221 61.111 0.00 0.00 38.84 5.54
101 102 3.071459 GATGACACAAGCGTCGGCG 62.071 63.158 4.29 4.29 46.35 6.46
114 115 4.814294 CGGCGGCCGCTAGAAACT 62.814 66.667 45.23 0.00 41.17 2.66
115 116 2.436115 GGCGGCCGCTAGAAACTT 60.436 61.111 45.23 0.00 41.60 2.66
116 117 2.750888 GGCGGCCGCTAGAAACTTG 61.751 63.158 45.23 5.71 41.60 3.16
117 118 1.740296 GCGGCCGCTAGAAACTTGA 60.740 57.895 41.71 0.00 38.26 3.02
118 119 1.696832 GCGGCCGCTAGAAACTTGAG 61.697 60.000 41.71 0.75 38.26 3.02
119 120 1.084370 CGGCCGCTAGAAACTTGAGG 61.084 60.000 14.67 0.00 30.83 3.86
120 121 0.249398 GGCCGCTAGAAACTTGAGGA 59.751 55.000 0.00 0.00 29.37 3.71
121 122 1.134371 GGCCGCTAGAAACTTGAGGAT 60.134 52.381 0.00 0.00 29.37 3.24
122 123 2.205911 GCCGCTAGAAACTTGAGGATC 58.794 52.381 0.00 0.00 29.37 3.36
123 124 2.464865 CCGCTAGAAACTTGAGGATCG 58.535 52.381 0.00 0.00 38.61 3.69
124 125 1.855360 CGCTAGAAACTTGAGGATCGC 59.145 52.381 0.00 0.00 38.61 4.58
125 126 2.480416 CGCTAGAAACTTGAGGATCGCT 60.480 50.000 0.00 0.00 38.61 4.93
126 127 2.863137 GCTAGAAACTTGAGGATCGCTG 59.137 50.000 0.00 0.00 38.61 5.18
127 128 1.731720 AGAAACTTGAGGATCGCTGC 58.268 50.000 0.00 0.00 38.61 5.25
128 129 0.371645 GAAACTTGAGGATCGCTGCG 59.628 55.000 17.25 17.25 38.61 5.18
129 130 0.320771 AAACTTGAGGATCGCTGCGT 60.321 50.000 22.48 9.40 38.61 5.24
130 131 1.016130 AACTTGAGGATCGCTGCGTG 61.016 55.000 22.48 5.87 38.61 5.34
131 132 1.153765 CTTGAGGATCGCTGCGTGA 60.154 57.895 22.48 3.55 38.61 4.35
132 133 0.737367 CTTGAGGATCGCTGCGTGAA 60.737 55.000 22.48 2.70 38.61 3.18
133 134 0.108186 TTGAGGATCGCTGCGTGAAT 60.108 50.000 22.48 8.27 38.61 2.57
134 135 0.744281 TGAGGATCGCTGCGTGAATA 59.256 50.000 22.48 1.84 38.61 1.75
135 136 1.132588 GAGGATCGCTGCGTGAATAC 58.867 55.000 22.48 9.14 0.00 1.89
145 146 2.660944 CGTGAATACGGCGTGATGT 58.339 52.632 24.86 4.39 46.23 3.06
146 147 0.297525 CGTGAATACGGCGTGATGTG 59.702 55.000 24.86 4.14 46.23 3.21
147 148 1.635844 GTGAATACGGCGTGATGTGA 58.364 50.000 24.86 0.43 0.00 3.58
148 149 2.201732 GTGAATACGGCGTGATGTGAT 58.798 47.619 24.86 3.43 0.00 3.06
149 150 3.377439 GTGAATACGGCGTGATGTGATA 58.623 45.455 24.86 0.00 0.00 2.15
150 151 3.425525 GTGAATACGGCGTGATGTGATAG 59.574 47.826 24.86 0.00 0.00 2.08
151 152 2.724977 ATACGGCGTGATGTGATAGG 57.275 50.000 24.86 0.00 0.00 2.57
152 153 1.682740 TACGGCGTGATGTGATAGGA 58.317 50.000 24.86 0.00 0.00 2.94
153 154 1.040646 ACGGCGTGATGTGATAGGAT 58.959 50.000 13.76 0.00 0.00 3.24
154 155 1.269778 ACGGCGTGATGTGATAGGATG 60.270 52.381 13.76 0.00 0.00 3.51
155 156 1.800805 GGCGTGATGTGATAGGATGG 58.199 55.000 0.00 0.00 0.00 3.51
156 157 1.344438 GGCGTGATGTGATAGGATGGA 59.656 52.381 0.00 0.00 0.00 3.41
157 158 2.224281 GGCGTGATGTGATAGGATGGAA 60.224 50.000 0.00 0.00 0.00 3.53
158 159 3.062763 GCGTGATGTGATAGGATGGAAG 58.937 50.000 0.00 0.00 0.00 3.46
159 160 3.657634 CGTGATGTGATAGGATGGAAGG 58.342 50.000 0.00 0.00 0.00 3.46
160 161 3.321968 CGTGATGTGATAGGATGGAAGGA 59.678 47.826 0.00 0.00 0.00 3.36
161 162 4.020751 CGTGATGTGATAGGATGGAAGGAT 60.021 45.833 0.00 0.00 0.00 3.24
162 163 5.486526 GTGATGTGATAGGATGGAAGGATC 58.513 45.833 0.00 0.00 0.00 3.36
163 164 5.012458 GTGATGTGATAGGATGGAAGGATCA 59.988 44.000 0.00 0.00 0.00 2.92
164 165 5.608015 TGATGTGATAGGATGGAAGGATCAA 59.392 40.000 0.00 0.00 0.00 2.57
165 166 6.273965 TGATGTGATAGGATGGAAGGATCAAT 59.726 38.462 0.00 0.00 0.00 2.57
166 167 6.119240 TGTGATAGGATGGAAGGATCAATC 57.881 41.667 0.00 0.00 35.54 2.67
167 168 5.608015 TGTGATAGGATGGAAGGATCAATCA 59.392 40.000 0.00 0.00 37.69 2.57
168 169 6.171921 GTGATAGGATGGAAGGATCAATCAG 58.828 44.000 0.00 0.00 37.69 2.90
169 170 5.848369 TGATAGGATGGAAGGATCAATCAGT 59.152 40.000 0.00 0.00 37.69 3.41
170 171 6.331042 TGATAGGATGGAAGGATCAATCAGTT 59.669 38.462 0.00 0.00 37.69 3.16
171 172 5.046288 AGGATGGAAGGATCAATCAGTTC 57.954 43.478 0.00 0.00 37.69 3.01
172 173 4.140536 GGATGGAAGGATCAATCAGTTCC 58.859 47.826 12.98 12.98 37.69 3.62
173 174 4.141298 GGATGGAAGGATCAATCAGTTCCT 60.141 45.833 17.60 8.63 46.23 3.36
174 175 5.072329 GGATGGAAGGATCAATCAGTTCCTA 59.928 44.000 17.60 9.45 44.04 2.94
175 176 6.240118 GGATGGAAGGATCAATCAGTTCCTAT 60.240 42.308 17.60 12.19 44.04 2.57
176 177 6.581388 TGGAAGGATCAATCAGTTCCTATT 57.419 37.500 17.60 0.00 44.04 1.73
177 178 6.973642 TGGAAGGATCAATCAGTTCCTATTT 58.026 36.000 17.60 0.00 44.04 1.40
178 179 7.413446 TGGAAGGATCAATCAGTTCCTATTTT 58.587 34.615 17.60 0.00 44.04 1.82
179 180 7.557719 TGGAAGGATCAATCAGTTCCTATTTTC 59.442 37.037 17.60 0.00 44.04 2.29
180 181 7.777440 GGAAGGATCAATCAGTTCCTATTTTCT 59.223 37.037 12.74 0.00 44.04 2.52
181 182 8.744568 AAGGATCAATCAGTTCCTATTTTCTC 57.255 34.615 0.00 0.00 44.04 2.87
182 183 6.989169 AGGATCAATCAGTTCCTATTTTCTCG 59.011 38.462 0.00 0.00 43.21 4.04
183 184 6.986817 GGATCAATCAGTTCCTATTTTCTCGA 59.013 38.462 0.00 0.00 33.96 4.04
184 185 7.042389 GGATCAATCAGTTCCTATTTTCTCGAC 60.042 40.741 0.00 0.00 33.96 4.20
185 186 6.697395 TCAATCAGTTCCTATTTTCTCGACA 58.303 36.000 0.00 0.00 0.00 4.35
186 187 7.331026 TCAATCAGTTCCTATTTTCTCGACAT 58.669 34.615 0.00 0.00 0.00 3.06
187 188 7.278646 TCAATCAGTTCCTATTTTCTCGACATG 59.721 37.037 0.00 0.00 0.00 3.21
188 189 4.870426 TCAGTTCCTATTTTCTCGACATGC 59.130 41.667 0.00 0.00 0.00 4.06
189 190 4.631377 CAGTTCCTATTTTCTCGACATGCA 59.369 41.667 0.00 0.00 0.00 3.96
190 191 4.631813 AGTTCCTATTTTCTCGACATGCAC 59.368 41.667 0.00 0.00 0.00 4.57
191 192 3.186909 TCCTATTTTCTCGACATGCACG 58.813 45.455 6.56 6.56 0.00 5.34
192 193 2.930040 CCTATTTTCTCGACATGCACGT 59.070 45.455 11.53 0.00 0.00 4.49
193 194 4.109766 CCTATTTTCTCGACATGCACGTA 58.890 43.478 11.53 1.26 0.00 3.57
194 195 3.991605 ATTTTCTCGACATGCACGTAC 57.008 42.857 11.53 0.00 0.00 3.67
195 196 2.717580 TTTCTCGACATGCACGTACT 57.282 45.000 11.53 0.00 0.00 2.73
196 197 3.835378 TTTCTCGACATGCACGTACTA 57.165 42.857 11.53 0.00 0.00 1.82
197 198 3.835378 TTCTCGACATGCACGTACTAA 57.165 42.857 11.53 2.15 0.00 2.24
198 199 3.127081 TCTCGACATGCACGTACTAAC 57.873 47.619 11.53 0.00 0.00 2.34
199 200 2.159476 TCTCGACATGCACGTACTAACC 60.159 50.000 11.53 0.00 0.00 2.85
200 201 1.814394 TCGACATGCACGTACTAACCT 59.186 47.619 11.53 0.00 0.00 3.50
201 202 1.917955 CGACATGCACGTACTAACCTG 59.082 52.381 0.00 0.00 0.00 4.00
202 203 2.268298 GACATGCACGTACTAACCTGG 58.732 52.381 0.00 0.00 0.00 4.45
203 204 1.897133 ACATGCACGTACTAACCTGGA 59.103 47.619 0.00 0.00 0.00 3.86
204 205 2.300723 ACATGCACGTACTAACCTGGAA 59.699 45.455 0.00 0.00 0.00 3.53
205 206 3.244284 ACATGCACGTACTAACCTGGAAA 60.244 43.478 0.00 0.00 0.00 3.13
206 207 3.034721 TGCACGTACTAACCTGGAAAG 57.965 47.619 0.00 0.00 0.00 2.62
207 208 2.629137 TGCACGTACTAACCTGGAAAGA 59.371 45.455 0.00 0.00 0.00 2.52
208 209 3.069872 TGCACGTACTAACCTGGAAAGAA 59.930 43.478 0.00 0.00 0.00 2.52
209 210 4.251268 GCACGTACTAACCTGGAAAGAAT 58.749 43.478 0.00 0.00 0.00 2.40
210 211 4.329256 GCACGTACTAACCTGGAAAGAATC 59.671 45.833 0.00 0.00 0.00 2.52
211 212 5.475719 CACGTACTAACCTGGAAAGAATCA 58.524 41.667 0.00 0.00 0.00 2.57
212 213 5.347907 CACGTACTAACCTGGAAAGAATCAC 59.652 44.000 0.00 0.00 0.00 3.06
213 214 5.011329 ACGTACTAACCTGGAAAGAATCACA 59.989 40.000 0.00 0.00 0.00 3.58
214 215 5.929992 CGTACTAACCTGGAAAGAATCACAA 59.070 40.000 0.00 0.00 0.00 3.33
215 216 6.090898 CGTACTAACCTGGAAAGAATCACAAG 59.909 42.308 0.00 0.00 0.00 3.16
216 217 5.316987 ACTAACCTGGAAAGAATCACAAGG 58.683 41.667 0.00 0.00 0.00 3.61
217 218 3.160679 ACCTGGAAAGAATCACAAGGG 57.839 47.619 0.00 0.00 0.00 3.95
218 219 2.716424 ACCTGGAAAGAATCACAAGGGA 59.284 45.455 0.00 0.00 0.00 4.20
219 220 3.334881 ACCTGGAAAGAATCACAAGGGAT 59.665 43.478 0.00 0.00 0.00 3.85
220 221 3.950395 CCTGGAAAGAATCACAAGGGATC 59.050 47.826 0.00 0.00 0.00 3.36
221 222 4.568380 CCTGGAAAGAATCACAAGGGATCA 60.568 45.833 0.00 0.00 0.00 2.92
222 223 4.996793 TGGAAAGAATCACAAGGGATCAA 58.003 39.130 0.00 0.00 0.00 2.57
223 224 5.582953 TGGAAAGAATCACAAGGGATCAAT 58.417 37.500 0.00 0.00 0.00 2.57
224 225 5.653769 TGGAAAGAATCACAAGGGATCAATC 59.346 40.000 0.00 0.00 0.00 2.67
225 226 5.653769 GGAAAGAATCACAAGGGATCAATCA 59.346 40.000 0.00 0.00 0.00 2.57
226 227 6.183360 GGAAAGAATCACAAGGGATCAATCAG 60.183 42.308 0.00 0.00 0.00 2.90
227 228 5.447778 AGAATCACAAGGGATCAATCAGT 57.552 39.130 0.00 0.00 0.00 3.41
228 229 5.435291 AGAATCACAAGGGATCAATCAGTC 58.565 41.667 0.00 0.00 0.00 3.51
229 230 3.634397 TCACAAGGGATCAATCAGTCC 57.366 47.619 0.00 0.00 0.00 3.85
230 231 2.093500 TCACAAGGGATCAATCAGTCCG 60.093 50.000 0.00 0.00 35.28 4.79
231 232 1.909302 ACAAGGGATCAATCAGTCCGT 59.091 47.619 0.00 0.00 35.28 4.69
232 233 2.305927 ACAAGGGATCAATCAGTCCGTT 59.694 45.455 0.00 0.00 41.76 4.44
233 234 3.244911 ACAAGGGATCAATCAGTCCGTTT 60.245 43.478 0.00 0.00 39.76 3.60
234 235 3.721087 AGGGATCAATCAGTCCGTTTT 57.279 42.857 0.00 0.00 35.28 2.43
235 236 4.034285 AGGGATCAATCAGTCCGTTTTT 57.966 40.909 0.00 0.00 35.28 1.94
260 261 2.805353 CGTGCACGTCCTTCCTCG 60.805 66.667 30.50 0.79 34.11 4.63
261 262 3.112709 GTGCACGTCCTTCCTCGC 61.113 66.667 0.00 0.00 0.00 5.03
262 263 3.303135 TGCACGTCCTTCCTCGCT 61.303 61.111 0.00 0.00 0.00 4.93
263 264 2.811317 GCACGTCCTTCCTCGCTG 60.811 66.667 0.00 0.00 0.00 5.18
264 265 2.811317 CACGTCCTTCCTCGCTGC 60.811 66.667 0.00 0.00 0.00 5.25
265 266 4.421479 ACGTCCTTCCTCGCTGCG 62.421 66.667 17.25 17.25 0.00 5.18
266 267 4.421479 CGTCCTTCCTCGCTGCGT 62.421 66.667 22.48 0.00 0.00 5.24
267 268 2.811317 GTCCTTCCTCGCTGCGTG 60.811 66.667 22.48 19.24 0.00 5.34
268 269 2.989253 TCCTTCCTCGCTGCGTGA 60.989 61.111 23.74 17.37 0.00 4.35
269 270 2.507992 CCTTCCTCGCTGCGTGAG 60.508 66.667 23.74 14.01 39.58 3.51
278 279 4.463879 CTGCGTGAGGCCCTCAGG 62.464 72.222 25.51 25.51 45.56 3.86
288 289 3.775654 CCCTCAGGCCAGACGTCC 61.776 72.222 13.01 0.00 0.00 4.79
289 290 2.997315 CCTCAGGCCAGACGTCCA 60.997 66.667 13.01 0.00 0.00 4.02
290 291 2.575993 CTCAGGCCAGACGTCCAG 59.424 66.667 13.01 4.86 0.00 3.86
291 292 3.655810 CTCAGGCCAGACGTCCAGC 62.656 68.421 13.01 15.29 0.00 4.85
292 293 3.699894 CAGGCCAGACGTCCAGCT 61.700 66.667 22.31 9.51 0.00 4.24
293 294 2.925170 AGGCCAGACGTCCAGCTT 60.925 61.111 22.31 14.98 0.00 3.74
294 295 1.609501 AGGCCAGACGTCCAGCTTA 60.610 57.895 22.31 0.00 0.00 3.09
295 296 1.192146 AGGCCAGACGTCCAGCTTAA 61.192 55.000 22.31 0.00 0.00 1.85
296 297 0.107654 GGCCAGACGTCCAGCTTAAT 60.108 55.000 22.31 0.00 0.00 1.40
297 298 1.679032 GGCCAGACGTCCAGCTTAATT 60.679 52.381 22.31 0.00 0.00 1.40
298 299 2.084546 GCCAGACGTCCAGCTTAATTT 58.915 47.619 13.01 0.00 0.00 1.82
299 300 2.488153 GCCAGACGTCCAGCTTAATTTT 59.512 45.455 13.01 0.00 0.00 1.82
300 301 3.057526 GCCAGACGTCCAGCTTAATTTTT 60.058 43.478 13.01 0.00 0.00 1.94
328 329 9.632807 TTTCTTTTATCACGGAAAACATATTGG 57.367 29.630 0.00 0.00 0.00 3.16
329 330 7.767261 TCTTTTATCACGGAAAACATATTGGG 58.233 34.615 0.00 0.00 0.00 4.12
330 331 5.508200 TTATCACGGAAAACATATTGGGC 57.492 39.130 0.00 0.00 0.00 5.36
331 332 2.096248 TCACGGAAAACATATTGGGCC 58.904 47.619 0.00 0.00 0.00 5.80
332 333 1.821753 CACGGAAAACATATTGGGCCA 59.178 47.619 0.00 0.00 0.00 5.36
333 334 2.430332 CACGGAAAACATATTGGGCCAT 59.570 45.455 7.26 0.00 0.00 4.40
334 335 3.634448 CACGGAAAACATATTGGGCCATA 59.366 43.478 7.26 2.27 0.00 2.74
335 336 3.888930 ACGGAAAACATATTGGGCCATAG 59.111 43.478 7.26 0.00 0.00 2.23
336 337 3.305335 CGGAAAACATATTGGGCCATAGC 60.305 47.826 7.26 0.00 38.76 2.97
350 351 4.379339 GCCATAGCCTAGCTGTATACTC 57.621 50.000 4.17 0.00 40.10 2.59
351 352 4.020543 GCCATAGCCTAGCTGTATACTCT 58.979 47.826 4.17 4.18 40.10 3.24
352 353 4.142271 GCCATAGCCTAGCTGTATACTCTG 60.142 50.000 4.17 0.00 40.10 3.35
353 354 4.400884 CCATAGCCTAGCTGTATACTCTGG 59.599 50.000 4.17 3.67 40.10 3.86
354 355 2.883026 AGCCTAGCTGTATACTCTGGG 58.117 52.381 17.52 17.52 37.57 4.45
355 356 1.896465 GCCTAGCTGTATACTCTGGGG 59.104 57.143 20.80 15.82 0.00 4.96
356 357 2.491086 GCCTAGCTGTATACTCTGGGGA 60.491 54.545 20.80 0.00 0.00 4.81
357 358 3.426615 CCTAGCTGTATACTCTGGGGAG 58.573 54.545 15.40 1.41 44.62 4.30
358 359 2.390225 AGCTGTATACTCTGGGGAGG 57.610 55.000 4.17 0.00 43.46 4.30
359 360 1.133009 AGCTGTATACTCTGGGGAGGG 60.133 57.143 4.17 0.00 43.46 4.30
360 361 1.343069 CTGTATACTCTGGGGAGGGC 58.657 60.000 4.17 0.00 43.46 5.19
361 362 0.105142 TGTATACTCTGGGGAGGGCC 60.105 60.000 4.17 0.00 43.46 5.80
362 363 0.191314 GTATACTCTGGGGAGGGCCT 59.809 60.000 5.25 5.25 43.46 5.19
363 364 0.487772 TATACTCTGGGGAGGGCCTC 59.512 60.000 25.80 25.80 43.46 4.70
374 375 1.609783 AGGGCCTCCTCGATTTTGG 59.390 57.895 0.00 0.00 39.80 3.28
375 376 1.453928 GGGCCTCCTCGATTTTGGG 60.454 63.158 0.84 0.00 0.00 4.12
376 377 1.453928 GGCCTCCTCGATTTTGGGG 60.454 63.158 0.00 0.00 0.00 4.96
377 378 1.453928 GCCTCCTCGATTTTGGGGG 60.454 63.158 2.89 2.89 46.64 5.40
378 379 1.453928 CCTCCTCGATTTTGGGGGC 60.454 63.158 0.00 0.00 37.14 5.80
379 380 1.453928 CTCCTCGATTTTGGGGGCC 60.454 63.158 0.00 0.00 0.00 5.80
380 381 2.442087 CCTCGATTTTGGGGGCCC 60.442 66.667 15.76 15.76 0.00 5.80
381 382 2.828549 CTCGATTTTGGGGGCCCG 60.829 66.667 17.79 2.66 39.42 6.13
382 383 4.434354 TCGATTTTGGGGGCCCGG 62.434 66.667 17.79 0.00 39.42 5.73
468 469 2.664851 CACAGGCGCCGAGTCAAA 60.665 61.111 23.20 0.00 0.00 2.69
469 470 2.034879 CACAGGCGCCGAGTCAAAT 61.035 57.895 23.20 0.00 0.00 2.32
470 471 2.034879 ACAGGCGCCGAGTCAAATG 61.035 57.895 23.20 13.89 0.00 2.32
471 472 3.127533 AGGCGCCGAGTCAAATGC 61.128 61.111 23.20 0.00 0.00 3.56
473 474 4.520846 GCGCCGAGTCAAATGCGG 62.521 66.667 13.06 0.00 46.59 5.69
488 489 3.562635 CGGAAGCTTTGGTCGACC 58.437 61.111 28.17 28.17 0.00 4.79
489 490 2.033194 CGGAAGCTTTGGTCGACCC 61.033 63.158 31.19 15.95 34.29 4.46
490 491 1.072505 GGAAGCTTTGGTCGACCCA 59.927 57.895 31.19 18.97 43.27 4.51
497 498 2.422591 TGGTCGACCCAAACGGAC 59.577 61.111 31.19 3.87 41.50 4.79
498 499 2.422591 GGTCGACCCAAACGGACA 59.577 61.111 24.75 0.00 34.64 4.02
499 500 1.227615 GGTCGACCCAAACGGACAA 60.228 57.895 24.75 0.00 34.64 3.18
500 501 0.814812 GGTCGACCCAAACGGACAAA 60.815 55.000 24.75 0.00 34.64 2.83
501 502 1.015868 GTCGACCCAAACGGACAAAA 58.984 50.000 3.51 0.00 34.64 2.44
502 503 1.401199 GTCGACCCAAACGGACAAAAA 59.599 47.619 3.51 0.00 34.64 1.94
503 504 1.671845 TCGACCCAAACGGACAAAAAG 59.328 47.619 0.00 0.00 34.64 2.27
504 505 1.847818 GACCCAAACGGACAAAAAGC 58.152 50.000 0.00 0.00 34.64 3.51
505 506 0.101579 ACCCAAACGGACAAAAAGCG 59.898 50.000 0.00 0.00 34.64 4.68
506 507 0.596341 CCCAAACGGACAAAAAGCGG 60.596 55.000 0.00 0.00 0.00 5.52
507 508 0.382515 CCAAACGGACAAAAAGCGGA 59.617 50.000 0.00 0.00 0.00 5.54
508 509 1.472990 CAAACGGACAAAAAGCGGAC 58.527 50.000 0.00 0.00 0.00 4.79
509 510 0.028374 AAACGGACAAAAAGCGGACG 59.972 50.000 0.00 0.00 0.00 4.79
510 511 0.810823 AACGGACAAAAAGCGGACGA 60.811 50.000 0.00 0.00 0.00 4.20
511 512 0.810823 ACGGACAAAAAGCGGACGAA 60.811 50.000 0.00 0.00 0.00 3.85
512 513 0.305313 CGGACAAAAAGCGGACGAAA 59.695 50.000 0.00 0.00 0.00 3.46
513 514 1.069500 CGGACAAAAAGCGGACGAAAT 60.069 47.619 0.00 0.00 0.00 2.17
514 515 2.603652 CGGACAAAAAGCGGACGAAATT 60.604 45.455 0.00 0.00 0.00 1.82
515 516 2.724174 GGACAAAAAGCGGACGAAATTG 59.276 45.455 0.00 0.00 0.00 2.32
516 517 3.368495 GACAAAAAGCGGACGAAATTGT 58.632 40.909 0.00 0.94 32.68 2.71
517 518 3.368495 ACAAAAAGCGGACGAAATTGTC 58.632 40.909 0.00 0.00 38.17 3.18
527 528 1.945207 CGAAATTGTCGTCCGTTTGG 58.055 50.000 0.00 0.00 45.09 3.28
528 529 1.399215 CGAAATTGTCGTCCGTTTGGG 60.399 52.381 0.00 0.00 45.09 4.12
529 530 1.605232 GAAATTGTCGTCCGTTTGGGT 59.395 47.619 0.00 0.00 37.00 4.51
530 531 1.232119 AATTGTCGTCCGTTTGGGTC 58.768 50.000 0.00 0.00 37.00 4.46
531 532 0.947180 ATTGTCGTCCGTTTGGGTCG 60.947 55.000 0.00 0.00 46.78 4.79
532 533 2.735857 GTCGTCCGTTTGGGTCGG 60.736 66.667 0.00 0.00 45.67 4.79
533 534 4.668118 TCGTCCGTTTGGGTCGGC 62.668 66.667 0.00 0.00 45.67 5.54
535 536 4.324991 GTCCGTTTGGGTCGGCCT 62.325 66.667 5.77 0.00 46.49 5.19
536 537 4.323477 TCCGTTTGGGTCGGCCTG 62.323 66.667 5.77 0.00 46.49 4.85
537 538 4.636435 CCGTTTGGGTCGGCCTGT 62.636 66.667 5.77 0.00 41.48 4.00
538 539 2.593436 CGTTTGGGTCGGCCTGTT 60.593 61.111 5.77 0.00 34.45 3.16
539 540 2.903547 CGTTTGGGTCGGCCTGTTG 61.904 63.158 5.77 0.00 34.45 3.33
540 541 2.203422 TTTGGGTCGGCCTGTTGG 60.203 61.111 5.77 0.00 34.45 3.77
541 542 2.758207 TTTGGGTCGGCCTGTTGGA 61.758 57.895 5.77 0.00 34.57 3.53
542 543 2.690653 TTTGGGTCGGCCTGTTGGAG 62.691 60.000 5.77 0.00 34.57 3.86
543 544 3.637273 GGGTCGGCCTGTTGGAGT 61.637 66.667 5.77 0.00 34.57 3.85
544 545 2.430367 GGTCGGCCTGTTGGAGTT 59.570 61.111 0.00 0.00 34.57 3.01
545 546 1.966451 GGTCGGCCTGTTGGAGTTG 60.966 63.158 0.00 0.00 34.57 3.16
546 547 2.281484 TCGGCCTGTTGGAGTTGC 60.281 61.111 0.00 0.00 34.57 4.17
547 548 2.281761 CGGCCTGTTGGAGTTGCT 60.282 61.111 0.00 0.00 34.57 3.91
548 549 2.328099 CGGCCTGTTGGAGTTGCTC 61.328 63.158 0.00 0.00 34.57 4.26
549 550 1.073897 GGCCTGTTGGAGTTGCTCT 59.926 57.895 0.00 0.00 34.57 4.09
550 551 0.324943 GGCCTGTTGGAGTTGCTCTA 59.675 55.000 0.00 0.00 34.57 2.43
551 552 1.271379 GGCCTGTTGGAGTTGCTCTAA 60.271 52.381 0.00 0.00 34.57 2.10
552 553 2.079925 GCCTGTTGGAGTTGCTCTAAG 58.920 52.381 0.00 0.00 31.92 2.18
553 554 2.704572 CCTGTTGGAGTTGCTCTAAGG 58.295 52.381 0.00 0.00 31.92 2.69
554 555 2.303022 CCTGTTGGAGTTGCTCTAAGGA 59.697 50.000 0.00 0.00 31.92 3.36
555 556 3.244561 CCTGTTGGAGTTGCTCTAAGGAA 60.245 47.826 0.00 0.00 31.92 3.36
556 557 3.999663 CTGTTGGAGTTGCTCTAAGGAAG 59.000 47.826 0.00 0.00 31.92 3.46
557 558 3.646162 TGTTGGAGTTGCTCTAAGGAAGA 59.354 43.478 0.00 0.00 31.92 2.87
558 559 4.102524 TGTTGGAGTTGCTCTAAGGAAGAA 59.897 41.667 0.00 0.00 31.92 2.52
559 560 4.974645 TGGAGTTGCTCTAAGGAAGAAA 57.025 40.909 0.00 0.00 32.46 2.52
565 566 7.824779 GGAGTTGCTCTAAGGAAGAAAAGAATA 59.175 37.037 0.00 0.00 32.46 1.75
637 638 9.744468 ATTTTACATGCGGGATTAATTTTCTAC 57.256 29.630 0.00 0.00 0.00 2.59
642 643 8.257306 ACATGCGGGATTAATTTTCTACAAAAT 58.743 29.630 0.00 0.00 42.95 1.82
711 712 2.487762 CCACAATTGGCATGTCGTACTT 59.512 45.455 10.83 0.00 35.56 2.24
712 713 3.687212 CCACAATTGGCATGTCGTACTTA 59.313 43.478 10.83 0.00 35.56 2.24
713 714 4.201812 CCACAATTGGCATGTCGTACTTAG 60.202 45.833 10.83 0.00 35.56 2.18
716 717 5.579511 ACAATTGGCATGTCGTACTTAGTAC 59.420 40.000 12.16 12.16 35.86 2.73
726 730 7.069852 TGTCGTACTTAGTACTAGAAGCAAG 57.930 40.000 18.76 1.12 36.93 4.01
914 918 2.283173 CCCAGCCCCACAGAAACC 60.283 66.667 0.00 0.00 0.00 3.27
918 922 3.590574 GCCCCACAGAAACCCCCT 61.591 66.667 0.00 0.00 0.00 4.79
926 930 0.681243 CAGAAACCCCCTAAGCCAGC 60.681 60.000 0.00 0.00 0.00 4.85
948 952 4.785453 GCAACCTCCCTCTGCCCG 62.785 72.222 0.00 0.00 0.00 6.13
949 953 4.785453 CAACCTCCCTCTGCCCGC 62.785 72.222 0.00 0.00 0.00 6.13
1377 1394 3.400054 ACCTAGGCCTTGGCCGTC 61.400 66.667 30.44 1.75 34.52 4.79
1398 1419 4.175489 CATGCTGCTGCTCCGTGC 62.175 66.667 17.00 0.00 40.48 5.34
1445 1466 0.319900 TCGAAGAGTTCTGCTGTGCC 60.320 55.000 0.00 0.00 0.00 5.01
1465 1486 1.211190 CCTGCGCTGCTTCTTTTCC 59.789 57.895 9.73 0.00 0.00 3.13
1529 1555 9.948964 TTCATCTTGATGAAGTTTCTTATGAGA 57.051 29.630 18.67 0.00 35.80 3.27
1532 1558 7.334090 TCTTGATGAAGTTTCTTATGAGAGGG 58.666 38.462 0.00 0.00 32.44 4.30
1533 1559 5.994250 TGATGAAGTTTCTTATGAGAGGGG 58.006 41.667 0.00 0.00 32.44 4.79
1567 1593 9.726438 GGCAACTTGTATATATTAAGAGGATGT 57.274 33.333 13.53 0.00 0.00 3.06
1629 3199 4.501071 GGCTCTAGTTCGTTTTACATCCA 58.499 43.478 0.00 0.00 0.00 3.41
1632 3202 6.456988 GGCTCTAGTTCGTTTTACATCCATTG 60.457 42.308 0.00 0.00 0.00 2.82
1641 3211 8.155821 TCGTTTTACATCCATTGTTTACTTGA 57.844 30.769 0.00 0.00 39.87 3.02
1693 3289 7.979444 ATATTCTGACTTTTTGGAAAGACGA 57.021 32.000 5.95 0.71 44.03 4.20
1698 3294 2.879026 ACTTTTTGGAAAGACGAGGCTC 59.121 45.455 3.87 3.87 44.03 4.70
1707 3303 2.355717 AGACGAGGCTCTTCTTTTCG 57.644 50.000 17.01 2.35 37.31 3.46
1716 3312 3.139077 GCTCTTCTTTTCGTTTCCCAGA 58.861 45.455 0.00 0.00 0.00 3.86
1741 3337 4.585879 ACTTCCCGTGCATATTAAGTTGT 58.414 39.130 0.00 0.00 0.00 3.32
1742 3338 5.736813 ACTTCCCGTGCATATTAAGTTGTA 58.263 37.500 0.00 0.00 0.00 2.41
1743 3339 5.815740 ACTTCCCGTGCATATTAAGTTGTAG 59.184 40.000 0.00 0.00 0.00 2.74
1744 3340 5.347620 TCCCGTGCATATTAAGTTGTAGT 57.652 39.130 0.00 0.00 0.00 2.73
1745 3341 6.468333 TCCCGTGCATATTAAGTTGTAGTA 57.532 37.500 0.00 0.00 0.00 1.82
1746 3342 6.275335 TCCCGTGCATATTAAGTTGTAGTAC 58.725 40.000 0.00 0.00 0.00 2.73
1759 3355 7.668525 AAGTTGTAGTACTAACAAAGATGGC 57.331 36.000 3.61 0.18 38.50 4.40
1760 3356 7.005709 AGTTGTAGTACTAACAAAGATGGCT 57.994 36.000 3.61 2.19 38.50 4.75
1761 3357 7.097834 AGTTGTAGTACTAACAAAGATGGCTC 58.902 38.462 3.61 0.00 38.50 4.70
1762 3358 6.599356 TGTAGTACTAACAAAGATGGCTCA 57.401 37.500 3.61 0.00 0.00 4.26
1763 3359 6.999950 TGTAGTACTAACAAAGATGGCTCAA 58.000 36.000 3.61 0.00 0.00 3.02
1764 3360 7.097192 TGTAGTACTAACAAAGATGGCTCAAG 58.903 38.462 3.61 0.00 0.00 3.02
1765 3361 4.938226 AGTACTAACAAAGATGGCTCAAGC 59.062 41.667 0.00 0.00 41.14 4.01
1766 3362 2.744202 ACTAACAAAGATGGCTCAAGCG 59.256 45.455 0.00 0.00 43.26 4.68
1767 3363 1.896220 AACAAAGATGGCTCAAGCGA 58.104 45.000 0.00 0.00 43.26 4.93
1768 3364 1.896220 ACAAAGATGGCTCAAGCGAA 58.104 45.000 0.00 0.00 43.26 4.70
1769 3365 2.440409 ACAAAGATGGCTCAAGCGAAT 58.560 42.857 0.00 0.00 43.26 3.34
1770 3366 2.421424 ACAAAGATGGCTCAAGCGAATC 59.579 45.455 7.77 7.77 43.26 2.52
1771 3367 2.408271 AAGATGGCTCAAGCGAATCA 57.592 45.000 14.85 1.39 43.26 2.57
1772 3368 2.408271 AGATGGCTCAAGCGAATCAA 57.592 45.000 14.85 0.00 43.26 2.57
1773 3369 2.012673 AGATGGCTCAAGCGAATCAAC 58.987 47.619 14.85 0.56 43.26 3.18
1774 3370 1.064654 GATGGCTCAAGCGAATCAACC 59.935 52.381 9.99 0.00 43.26 3.77
1775 3371 0.036732 TGGCTCAAGCGAATCAACCT 59.963 50.000 0.00 0.00 43.26 3.50
1776 3372 0.449388 GGCTCAAGCGAATCAACCTG 59.551 55.000 0.00 0.00 43.26 4.00
1777 3373 1.160137 GCTCAAGCGAATCAACCTGT 58.840 50.000 0.00 0.00 0.00 4.00
1778 3374 1.135859 GCTCAAGCGAATCAACCTGTG 60.136 52.381 0.00 0.00 0.00 3.66
1779 3375 1.466167 CTCAAGCGAATCAACCTGTGG 59.534 52.381 0.00 0.00 0.00 4.17
1780 3376 1.202758 TCAAGCGAATCAACCTGTGGT 60.203 47.619 0.00 0.00 37.65 4.16
1790 3386 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
1791 3387 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
1792 3388 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
1793 3389 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
1794 3390 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
1795 3391 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
1796 3392 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
1797 3393 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
1798 3394 2.714250 TGGTTGAGTTGGTTAGGTGGAT 59.286 45.455 0.00 0.00 0.00 3.41
1799 3395 3.911260 TGGTTGAGTTGGTTAGGTGGATA 59.089 43.478 0.00 0.00 0.00 2.59
1800 3396 4.019681 TGGTTGAGTTGGTTAGGTGGATAG 60.020 45.833 0.00 0.00 0.00 2.08
1801 3397 4.019591 GGTTGAGTTGGTTAGGTGGATAGT 60.020 45.833 0.00 0.00 0.00 2.12
1802 3398 4.819105 TGAGTTGGTTAGGTGGATAGTG 57.181 45.455 0.00 0.00 0.00 2.74
1803 3399 3.517901 TGAGTTGGTTAGGTGGATAGTGG 59.482 47.826 0.00 0.00 0.00 4.00
1804 3400 3.518303 GAGTTGGTTAGGTGGATAGTGGT 59.482 47.826 0.00 0.00 0.00 4.16
1805 3401 4.691238 AGTTGGTTAGGTGGATAGTGGTA 58.309 43.478 0.00 0.00 0.00 3.25
1806 3402 5.286221 AGTTGGTTAGGTGGATAGTGGTAT 58.714 41.667 0.00 0.00 0.00 2.73
1807 3403 5.365895 AGTTGGTTAGGTGGATAGTGGTATC 59.634 44.000 0.00 0.00 35.19 2.24
1819 3415 3.444955 TGGTATCCCCAACCCATCA 57.555 52.632 0.00 0.00 41.50 3.07
1820 3416 1.221635 TGGTATCCCCAACCCATCAG 58.778 55.000 0.00 0.00 41.50 2.90
1821 3417 0.478507 GGTATCCCCAACCCATCAGG 59.521 60.000 0.00 0.00 43.78 3.86
1835 3431 3.434309 CCATCAGGGTTCAAATTCTGGT 58.566 45.455 0.00 0.00 0.00 4.00
1836 3432 3.194116 CCATCAGGGTTCAAATTCTGGTG 59.806 47.826 0.00 0.00 37.90 4.17
1837 3433 2.238521 TCAGGGTTCAAATTCTGGTGC 58.761 47.619 0.00 0.00 0.00 5.01
1838 3434 2.158475 TCAGGGTTCAAATTCTGGTGCT 60.158 45.455 0.00 0.00 0.00 4.40
1839 3435 2.229784 CAGGGTTCAAATTCTGGTGCTC 59.770 50.000 0.00 0.00 0.00 4.26
1840 3436 1.200020 GGGTTCAAATTCTGGTGCTCG 59.800 52.381 0.00 0.00 0.00 5.03
1841 3437 1.401539 GGTTCAAATTCTGGTGCTCGC 60.402 52.381 0.00 0.00 0.00 5.03
1842 3438 1.266718 GTTCAAATTCTGGTGCTCGCA 59.733 47.619 0.00 0.00 0.00 5.10
1843 3439 1.825090 TCAAATTCTGGTGCTCGCAT 58.175 45.000 0.00 0.00 0.00 4.73
1844 3440 2.161855 TCAAATTCTGGTGCTCGCATT 58.838 42.857 0.00 0.00 0.00 3.56
1845 3441 3.342719 TCAAATTCTGGTGCTCGCATTA 58.657 40.909 0.00 0.00 0.00 1.90
1846 3442 3.947196 TCAAATTCTGGTGCTCGCATTAT 59.053 39.130 0.00 0.00 0.00 1.28
1847 3443 4.398988 TCAAATTCTGGTGCTCGCATTATT 59.601 37.500 0.00 0.00 0.00 1.40
1848 3444 4.558538 AATTCTGGTGCTCGCATTATTC 57.441 40.909 0.00 0.00 0.00 1.75
1849 3445 1.953559 TCTGGTGCTCGCATTATTCC 58.046 50.000 0.00 0.00 0.00 3.01
1850 3446 1.486310 TCTGGTGCTCGCATTATTCCT 59.514 47.619 0.00 0.00 0.00 3.36
1851 3447 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
1852 3448 1.209261 TGGTGCTCGCATTATTCCTGA 59.791 47.619 0.00 0.00 0.00 3.86
1853 3449 2.288666 GGTGCTCGCATTATTCCTGAA 58.711 47.619 0.00 0.00 0.00 3.02
1854 3450 2.880890 GGTGCTCGCATTATTCCTGAAT 59.119 45.455 0.00 0.00 34.93 2.57
1855 3451 3.316308 GGTGCTCGCATTATTCCTGAATT 59.684 43.478 0.00 0.00 32.50 2.17
1856 3452 4.202050 GGTGCTCGCATTATTCCTGAATTT 60.202 41.667 0.00 0.00 32.50 1.82
1857 3453 5.008613 GGTGCTCGCATTATTCCTGAATTTA 59.991 40.000 0.00 0.00 32.50 1.40
1858 3454 6.294176 GGTGCTCGCATTATTCCTGAATTTAT 60.294 38.462 0.00 0.00 32.50 1.40
1859 3455 7.141363 GTGCTCGCATTATTCCTGAATTTATT 58.859 34.615 0.00 0.00 32.50 1.40
1860 3456 7.649306 GTGCTCGCATTATTCCTGAATTTATTT 59.351 33.333 0.00 0.00 32.50 1.40
1861 3457 7.862372 TGCTCGCATTATTCCTGAATTTATTTC 59.138 33.333 0.00 0.00 34.72 2.17
1862 3458 7.862372 GCTCGCATTATTCCTGAATTTATTTCA 59.138 33.333 0.00 0.00 42.09 2.69
1875 3471 8.116651 TGAATTTATTTCAGAATTTCCGGTGA 57.883 30.769 0.00 0.00 39.44 4.02
1876 3472 8.748412 TGAATTTATTTCAGAATTTCCGGTGAT 58.252 29.630 0.00 0.00 39.44 3.06
1877 3473 8.931385 AATTTATTTCAGAATTTCCGGTGATG 57.069 30.769 0.00 0.00 0.00 3.07
1878 3474 3.848272 TTTCAGAATTTCCGGTGATGC 57.152 42.857 0.00 0.00 0.00 3.91
1879 3475 1.368641 TCAGAATTTCCGGTGATGCG 58.631 50.000 0.00 0.00 0.00 4.73
1880 3476 0.248215 CAGAATTTCCGGTGATGCGC 60.248 55.000 0.00 0.00 0.00 6.09
1881 3477 0.392998 AGAATTTCCGGTGATGCGCT 60.393 50.000 9.73 0.00 0.00 5.92
1882 3478 0.451783 GAATTTCCGGTGATGCGCTT 59.548 50.000 9.73 0.55 0.00 4.68
1883 3479 0.887933 AATTTCCGGTGATGCGCTTT 59.112 45.000 9.73 0.00 0.00 3.51
1884 3480 0.451783 ATTTCCGGTGATGCGCTTTC 59.548 50.000 9.73 6.46 0.00 2.62
1885 3481 0.886938 TTTCCGGTGATGCGCTTTCA 60.887 50.000 9.73 9.39 0.00 2.69
1886 3482 1.298157 TTCCGGTGATGCGCTTTCAG 61.298 55.000 9.73 1.30 0.00 3.02
1887 3483 2.753966 CCGGTGATGCGCTTTCAGG 61.754 63.158 9.73 6.87 0.00 3.86
1888 3484 1.741401 CGGTGATGCGCTTTCAGGA 60.741 57.895 9.73 0.00 0.00 3.86
1889 3485 1.796796 GGTGATGCGCTTTCAGGAC 59.203 57.895 9.73 0.44 0.00 3.85
1890 3486 1.421485 GTGATGCGCTTTCAGGACG 59.579 57.895 9.73 0.00 0.00 4.79
1891 3487 1.014044 GTGATGCGCTTTCAGGACGA 61.014 55.000 9.73 0.00 0.00 4.20
1892 3488 0.737367 TGATGCGCTTTCAGGACGAG 60.737 55.000 9.73 0.00 0.00 4.18
1893 3489 1.424493 GATGCGCTTTCAGGACGAGG 61.424 60.000 9.73 0.00 0.00 4.63
1894 3490 3.491652 GCGCTTTCAGGACGAGGC 61.492 66.667 0.00 0.00 0.00 4.70
1895 3491 3.181967 CGCTTTCAGGACGAGGCG 61.182 66.667 0.00 0.00 39.79 5.52
1896 3492 3.491652 GCTTTCAGGACGAGGCGC 61.492 66.667 0.00 0.00 0.00 6.53
1897 3493 2.815647 CTTTCAGGACGAGGCGCC 60.816 66.667 21.89 21.89 0.00 6.53
1898 3494 3.302347 CTTTCAGGACGAGGCGCCT 62.302 63.158 33.48 33.48 34.78 5.52
1899 3495 1.945354 CTTTCAGGACGAGGCGCCTA 61.945 60.000 32.97 9.31 33.30 3.93
1900 3496 2.221906 TTTCAGGACGAGGCGCCTAC 62.222 60.000 32.97 22.82 33.30 3.18
1901 3497 4.554363 CAGGACGAGGCGCCTACG 62.554 72.222 32.97 32.67 44.07 3.51
1904 3500 4.125695 GACGAGGCGCCTACGGTT 62.126 66.667 34.97 23.48 40.57 4.44
1905 3501 2.751436 ACGAGGCGCCTACGGTTA 60.751 61.111 34.97 0.00 40.57 2.85
1906 3502 2.278401 CGAGGCGCCTACGGTTAC 60.278 66.667 32.97 14.51 40.57 2.50
1907 3503 2.768492 CGAGGCGCCTACGGTTACT 61.768 63.158 32.97 3.02 40.57 2.24
1908 3504 1.514553 GAGGCGCCTACGGTTACTT 59.485 57.895 32.97 2.04 40.57 2.24
1909 3505 0.527169 GAGGCGCCTACGGTTACTTC 60.527 60.000 32.97 9.38 40.57 3.01
1910 3506 1.875364 GGCGCCTACGGTTACTTCG 60.875 63.158 22.15 0.00 40.57 3.79
1911 3507 1.153958 GCGCCTACGGTTACTTCGT 60.154 57.895 0.00 0.00 43.64 3.85
1912 3508 0.098728 GCGCCTACGGTTACTTCGTA 59.901 55.000 0.00 0.00 41.38 3.43
1913 3509 1.467374 GCGCCTACGGTTACTTCGTAA 60.467 52.381 0.00 0.00 41.62 3.18
1914 3510 2.862512 CGCCTACGGTTACTTCGTAAA 58.137 47.619 0.00 0.00 41.62 2.01
1915 3511 3.438360 CGCCTACGGTTACTTCGTAAAT 58.562 45.455 0.00 0.00 41.62 1.40
1916 3512 3.483558 CGCCTACGGTTACTTCGTAAATC 59.516 47.826 0.00 0.00 41.62 2.17
1917 3513 4.676546 GCCTACGGTTACTTCGTAAATCT 58.323 43.478 0.00 0.00 41.62 2.40
1918 3514 5.105063 GCCTACGGTTACTTCGTAAATCTT 58.895 41.667 0.00 0.00 41.62 2.40
1919 3515 6.265577 GCCTACGGTTACTTCGTAAATCTTA 58.734 40.000 0.00 0.00 41.62 2.10
1920 3516 6.751888 GCCTACGGTTACTTCGTAAATCTTAA 59.248 38.462 0.00 0.00 41.62 1.85
1921 3517 7.043788 GCCTACGGTTACTTCGTAAATCTTAAG 60.044 40.741 0.00 0.00 41.62 1.85
1922 3518 8.184192 CCTACGGTTACTTCGTAAATCTTAAGA 58.816 37.037 7.82 7.82 41.62 2.10
1923 3519 9.727627 CTACGGTTACTTCGTAAATCTTAAGAT 57.272 33.333 12.37 12.37 41.62 2.40
1924 3520 8.403606 ACGGTTACTTCGTAAATCTTAAGATG 57.596 34.615 18.61 6.47 39.22 2.90
1925 3521 8.246180 ACGGTTACTTCGTAAATCTTAAGATGA 58.754 33.333 18.61 8.72 39.22 2.92
1926 3522 9.245962 CGGTTACTTCGTAAATCTTAAGATGAT 57.754 33.333 18.61 12.88 34.49 2.45
1931 3527 9.988815 ACTTCGTAAATCTTAAGATGATATGCT 57.011 29.630 18.61 0.00 34.49 3.79
1933 3529 8.763049 TCGTAAATCTTAAGATGATATGCTGG 57.237 34.615 18.61 2.76 34.49 4.85
1934 3530 7.331934 TCGTAAATCTTAAGATGATATGCTGGC 59.668 37.037 18.61 2.74 34.49 4.85
1935 3531 7.332926 CGTAAATCTTAAGATGATATGCTGGCT 59.667 37.037 18.61 0.00 34.49 4.75
1936 3532 7.684937 AAATCTTAAGATGATATGCTGGCTC 57.315 36.000 18.61 0.00 34.49 4.70
1937 3533 5.813513 TCTTAAGATGATATGCTGGCTCA 57.186 39.130 0.00 0.00 0.00 4.26
1938 3534 5.791666 TCTTAAGATGATATGCTGGCTCAG 58.208 41.667 0.00 0.00 34.12 3.35
1939 3535 5.306419 TCTTAAGATGATATGCTGGCTCAGT 59.694 40.000 0.00 0.00 33.43 3.41
1940 3536 3.681593 AGATGATATGCTGGCTCAGTC 57.318 47.619 4.45 0.00 33.43 3.51
1941 3537 3.241156 AGATGATATGCTGGCTCAGTCT 58.759 45.455 4.45 0.00 33.43 3.24
1942 3538 3.647113 AGATGATATGCTGGCTCAGTCTT 59.353 43.478 4.45 0.00 33.43 3.01
1943 3539 3.920231 TGATATGCTGGCTCAGTCTTT 57.080 42.857 4.45 0.00 33.43 2.52
1944 3540 3.801698 TGATATGCTGGCTCAGTCTTTC 58.198 45.455 4.45 0.00 33.43 2.62
1945 3541 2.299993 TATGCTGGCTCAGTCTTTCG 57.700 50.000 4.45 0.00 33.43 3.46
1946 3542 0.392193 ATGCTGGCTCAGTCTTTCGG 60.392 55.000 4.45 0.00 33.43 4.30
1947 3543 1.293498 GCTGGCTCAGTCTTTCGGA 59.707 57.895 4.45 0.00 33.43 4.55
1948 3544 0.739112 GCTGGCTCAGTCTTTCGGAG 60.739 60.000 4.45 0.00 40.44 4.63
1949 3545 0.108424 CTGGCTCAGTCTTTCGGAGG 60.108 60.000 0.00 0.00 38.48 4.30
1950 3546 0.832135 TGGCTCAGTCTTTCGGAGGT 60.832 55.000 0.00 0.00 38.48 3.85
1951 3547 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
1952 3548 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
1953 3549 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
1954 3550 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
1955 3551 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
1956 3552 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
1957 3553 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
1958 3554 2.832129 AGTCTTTCGGAGGTGCTCATAA 59.168 45.455 0.00 0.00 31.08 1.90
1959 3555 3.118956 AGTCTTTCGGAGGTGCTCATAAG 60.119 47.826 0.00 0.00 31.08 1.73
1960 3556 2.168521 TCTTTCGGAGGTGCTCATAAGG 59.831 50.000 0.00 0.00 31.08 2.69
1961 3557 0.830648 TTCGGAGGTGCTCATAAGGG 59.169 55.000 0.00 0.00 31.08 3.95
1962 3558 0.325296 TCGGAGGTGCTCATAAGGGT 60.325 55.000 0.00 0.00 31.08 4.34
1963 3559 1.063492 TCGGAGGTGCTCATAAGGGTA 60.063 52.381 0.00 0.00 31.08 3.69
1964 3560 1.341531 CGGAGGTGCTCATAAGGGTAG 59.658 57.143 0.00 0.00 31.08 3.18
1965 3561 1.694696 GGAGGTGCTCATAAGGGTAGG 59.305 57.143 0.00 0.00 31.08 3.18
1966 3562 1.694696 GAGGTGCTCATAAGGGTAGGG 59.305 57.143 0.00 0.00 0.00 3.53
1967 3563 1.009675 AGGTGCTCATAAGGGTAGGGT 59.990 52.381 0.00 0.00 0.00 4.34
1968 3564 1.141053 GGTGCTCATAAGGGTAGGGTG 59.859 57.143 0.00 0.00 0.00 4.61
1969 3565 1.838077 GTGCTCATAAGGGTAGGGTGT 59.162 52.381 0.00 0.00 0.00 4.16
1970 3566 1.837439 TGCTCATAAGGGTAGGGTGTG 59.163 52.381 0.00 0.00 0.00 3.82
1971 3567 1.475213 GCTCATAAGGGTAGGGTGTGC 60.475 57.143 0.00 0.00 0.00 4.57
1972 3568 0.828022 TCATAAGGGTAGGGTGTGCG 59.172 55.000 0.00 0.00 0.00 5.34
1973 3569 0.539986 CATAAGGGTAGGGTGTGCGT 59.460 55.000 0.00 0.00 0.00 5.24
1974 3570 0.539986 ATAAGGGTAGGGTGTGCGTG 59.460 55.000 0.00 0.00 0.00 5.34
1975 3571 0.832983 TAAGGGTAGGGTGTGCGTGT 60.833 55.000 0.00 0.00 0.00 4.49
1976 3572 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
1977 3573 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
1978 3574 1.667151 GGTAGGGTGTGCGTGTGTA 59.333 57.895 0.00 0.00 0.00 2.90
1979 3575 0.668401 GGTAGGGTGTGCGTGTGTAC 60.668 60.000 0.00 0.00 0.00 2.90
1990 3586 1.917273 CGTGTGTACGTTCATAGGGG 58.083 55.000 0.00 0.00 44.99 4.79
1991 3587 1.203052 CGTGTGTACGTTCATAGGGGT 59.797 52.381 0.00 0.00 44.99 4.95
1992 3588 2.613691 GTGTGTACGTTCATAGGGGTG 58.386 52.381 0.00 0.00 0.00 4.61
1993 3589 2.231964 GTGTGTACGTTCATAGGGGTGA 59.768 50.000 0.00 0.00 0.00 4.02
1994 3590 2.494471 TGTGTACGTTCATAGGGGTGAG 59.506 50.000 0.00 0.00 0.00 3.51
1995 3591 2.494870 GTGTACGTTCATAGGGGTGAGT 59.505 50.000 0.00 0.00 0.00 3.41
1996 3592 2.494471 TGTACGTTCATAGGGGTGAGTG 59.506 50.000 0.00 0.00 0.00 3.51
1997 3593 1.640917 ACGTTCATAGGGGTGAGTGT 58.359 50.000 0.00 0.00 0.00 3.55
1998 3594 2.811410 ACGTTCATAGGGGTGAGTGTA 58.189 47.619 0.00 0.00 0.00 2.90
1999 3595 3.371965 ACGTTCATAGGGGTGAGTGTAT 58.628 45.455 0.00 0.00 0.00 2.29
2000 3596 3.132289 ACGTTCATAGGGGTGAGTGTATG 59.868 47.826 0.00 0.00 0.00 2.39
2001 3597 3.467803 GTTCATAGGGGTGAGTGTATGC 58.532 50.000 0.00 0.00 0.00 3.14
2002 3598 1.686587 TCATAGGGGTGAGTGTATGCG 59.313 52.381 0.00 0.00 0.00 4.73
2003 3599 0.393077 ATAGGGGTGAGTGTATGCGC 59.607 55.000 0.00 0.00 0.00 6.09
2004 3600 2.011741 TAGGGGTGAGTGTATGCGCG 62.012 60.000 0.00 0.00 0.00 6.86
2005 3601 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
2006 3602 1.140161 GGGTGAGTGTATGCGCGTA 59.860 57.895 8.43 4.92 0.00 4.42
2007 3603 0.249322 GGGTGAGTGTATGCGCGTAT 60.249 55.000 15.52 15.52 0.00 3.06
2008 3604 1.001048 GGGTGAGTGTATGCGCGTATA 60.001 52.381 13.13 13.13 0.00 1.47
2009 3605 2.049228 GGTGAGTGTATGCGCGTATAC 58.951 52.381 32.19 32.19 34.78 1.47
2010 3606 1.707117 GTGAGTGTATGCGCGTATACG 59.293 52.381 32.34 20.87 43.27 3.06
2011 3607 1.598601 TGAGTGTATGCGCGTATACGA 59.401 47.619 32.34 22.34 43.02 3.43
2012 3608 2.231693 GAGTGTATGCGCGTATACGAG 58.768 52.381 32.34 25.49 43.02 4.18
2021 3617 2.939782 CGTATACGAGCGCTTGTGT 58.060 52.632 35.42 31.28 43.02 3.72
2022 3618 0.838229 CGTATACGAGCGCTTGTGTC 59.162 55.000 35.42 23.59 43.02 3.67
2023 3619 1.531264 CGTATACGAGCGCTTGTGTCT 60.531 52.381 35.42 22.80 43.02 3.41
2024 3620 1.846782 GTATACGAGCGCTTGTGTCTG 59.153 52.381 35.42 11.99 0.00 3.51
2025 3621 0.243907 ATACGAGCGCTTGTGTCTGT 59.756 50.000 35.42 13.86 0.00 3.41
2026 3622 0.876399 TACGAGCGCTTGTGTCTGTA 59.124 50.000 35.42 15.45 0.00 2.74
2027 3623 0.663568 ACGAGCGCTTGTGTCTGTAC 60.664 55.000 29.30 2.12 0.00 2.90
2028 3624 0.387367 CGAGCGCTTGTGTCTGTACT 60.387 55.000 13.26 0.00 0.00 2.73
2029 3625 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
2030 3626 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
2031 3627 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
2032 3628 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
2033 3629 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
2087 3693 7.571025 ACCTACCTACATAGTTTATGTTTGGG 58.429 38.462 17.29 14.13 46.69 4.12
2093 3699 9.675464 CCTACATAGTTTATGTTTGGGAAACTA 57.325 33.333 7.00 8.44 46.69 2.24
2197 3851 0.624254 TCGGTGAGGGAGCTCTCTTA 59.376 55.000 19.43 11.54 34.98 2.10
2198 3852 1.215673 TCGGTGAGGGAGCTCTCTTAT 59.784 52.381 19.43 0.00 34.98 1.73
2203 3857 5.654650 CGGTGAGGGAGCTCTCTTATTATAT 59.345 44.000 19.43 0.00 34.98 0.86
2205 3859 7.339721 CGGTGAGGGAGCTCTCTTATTATATAA 59.660 40.741 19.43 0.00 34.98 0.98
2311 3965 2.566913 TGCTAACTCACGGCAAGAAAA 58.433 42.857 0.00 0.00 32.79 2.29
2322 3976 2.159170 CGGCAAGAAAACCAAACTCCAA 60.159 45.455 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.254898 GCTAATTCAGATTGTCCATCGATTTCA 60.255 37.037 0.00 0.00 36.93 2.69
1 2 7.074502 GCTAATTCAGATTGTCCATCGATTTC 58.925 38.462 0.00 0.00 36.93 2.17
2 3 6.543465 TGCTAATTCAGATTGTCCATCGATTT 59.457 34.615 0.00 0.00 36.93 2.17
3 4 6.057533 TGCTAATTCAGATTGTCCATCGATT 58.942 36.000 0.00 0.00 36.93 3.34
4 5 5.614308 TGCTAATTCAGATTGTCCATCGAT 58.386 37.500 0.00 0.00 36.93 3.59
5 6 5.022282 TGCTAATTCAGATTGTCCATCGA 57.978 39.130 0.00 0.00 36.93 3.59
6 7 5.739752 TTGCTAATTCAGATTGTCCATCG 57.260 39.130 0.00 0.00 36.93 3.84
7 8 7.325660 TCTTTGCTAATTCAGATTGTCCATC 57.674 36.000 0.00 0.00 0.00 3.51
8 9 7.707624 TTCTTTGCTAATTCAGATTGTCCAT 57.292 32.000 0.00 0.00 0.00 3.41
9 10 7.523293 TTTCTTTGCTAATTCAGATTGTCCA 57.477 32.000 0.00 0.00 0.00 4.02
10 11 8.992835 AATTTCTTTGCTAATTCAGATTGTCC 57.007 30.769 0.00 0.00 0.00 4.02
74 75 0.907837 CTTGTGTCATCGCGACTACG 59.092 55.000 12.93 0.00 45.60 3.51
75 76 0.640768 GCTTGTGTCATCGCGACTAC 59.359 55.000 12.93 13.68 45.60 2.73
76 77 3.030209 GCTTGTGTCATCGCGACTA 57.970 52.632 12.93 0.00 45.60 2.59
77 78 3.862124 GCTTGTGTCATCGCGACT 58.138 55.556 12.93 0.00 45.60 4.18
81 82 2.391821 CGACGCTTGTGTCATCGC 59.608 61.111 13.64 0.00 38.84 4.58
82 83 3.071459 GCCGACGCTTGTGTCATCG 62.071 63.158 13.64 1.88 38.84 3.84
83 84 2.778679 GCCGACGCTTGTGTCATC 59.221 61.111 13.64 2.10 38.84 2.92
84 85 3.112075 CGCCGACGCTTGTGTCAT 61.112 61.111 13.64 0.00 38.84 3.06
98 99 2.436115 AAGTTTCTAGCGGCCGCC 60.436 61.111 44.47 28.51 43.17 6.13
99 100 1.696832 CTCAAGTTTCTAGCGGCCGC 61.697 60.000 42.34 42.34 42.33 6.53
100 101 1.084370 CCTCAAGTTTCTAGCGGCCG 61.084 60.000 24.05 24.05 0.00 6.13
101 102 0.249398 TCCTCAAGTTTCTAGCGGCC 59.751 55.000 0.00 0.00 0.00 6.13
102 103 2.205911 GATCCTCAAGTTTCTAGCGGC 58.794 52.381 0.00 0.00 0.00 6.53
103 104 2.464865 CGATCCTCAAGTTTCTAGCGG 58.535 52.381 0.00 0.00 0.00 5.52
104 105 1.855360 GCGATCCTCAAGTTTCTAGCG 59.145 52.381 0.00 0.00 0.00 4.26
105 106 2.863137 CAGCGATCCTCAAGTTTCTAGC 59.137 50.000 0.00 0.00 0.00 3.42
106 107 2.863137 GCAGCGATCCTCAAGTTTCTAG 59.137 50.000 0.00 0.00 0.00 2.43
107 108 2.735444 CGCAGCGATCCTCAAGTTTCTA 60.735 50.000 9.98 0.00 0.00 2.10
108 109 1.731720 GCAGCGATCCTCAAGTTTCT 58.268 50.000 0.00 0.00 0.00 2.52
109 110 0.371645 CGCAGCGATCCTCAAGTTTC 59.628 55.000 9.98 0.00 0.00 2.78
110 111 0.320771 ACGCAGCGATCCTCAAGTTT 60.321 50.000 24.65 0.00 0.00 2.66
111 112 1.016130 CACGCAGCGATCCTCAAGTT 61.016 55.000 24.65 0.00 0.00 2.66
112 113 1.446792 CACGCAGCGATCCTCAAGT 60.447 57.895 24.65 0.00 0.00 3.16
113 114 0.737367 TTCACGCAGCGATCCTCAAG 60.737 55.000 24.65 0.60 0.00 3.02
114 115 0.108186 ATTCACGCAGCGATCCTCAA 60.108 50.000 24.65 4.63 0.00 3.02
115 116 0.744281 TATTCACGCAGCGATCCTCA 59.256 50.000 24.65 0.00 0.00 3.86
116 117 1.132588 GTATTCACGCAGCGATCCTC 58.867 55.000 24.65 3.39 0.00 3.71
117 118 0.595053 CGTATTCACGCAGCGATCCT 60.595 55.000 24.65 5.87 42.05 3.24
118 119 1.846648 CGTATTCACGCAGCGATCC 59.153 57.895 24.65 1.76 42.05 3.36
122 123 4.265630 CGCCGTATTCACGCAGCG 62.266 66.667 14.82 14.82 46.65 5.18
128 129 1.635844 TCACATCACGCCGTATTCAC 58.364 50.000 0.00 0.00 0.00 3.18
129 130 2.595124 ATCACATCACGCCGTATTCA 57.405 45.000 0.00 0.00 0.00 2.57
130 131 2.987149 CCTATCACATCACGCCGTATTC 59.013 50.000 0.00 0.00 0.00 1.75
131 132 2.626266 TCCTATCACATCACGCCGTATT 59.374 45.455 0.00 0.00 0.00 1.89
132 133 2.235891 TCCTATCACATCACGCCGTAT 58.764 47.619 0.00 0.00 0.00 3.06
133 134 1.682740 TCCTATCACATCACGCCGTA 58.317 50.000 0.00 0.00 0.00 4.02
134 135 1.040646 ATCCTATCACATCACGCCGT 58.959 50.000 0.00 0.00 0.00 5.68
135 136 1.422388 CATCCTATCACATCACGCCG 58.578 55.000 0.00 0.00 0.00 6.46
136 137 1.344438 TCCATCCTATCACATCACGCC 59.656 52.381 0.00 0.00 0.00 5.68
137 138 2.820059 TCCATCCTATCACATCACGC 57.180 50.000 0.00 0.00 0.00 5.34
138 139 3.321968 TCCTTCCATCCTATCACATCACG 59.678 47.826 0.00 0.00 0.00 4.35
139 140 4.963318 TCCTTCCATCCTATCACATCAC 57.037 45.455 0.00 0.00 0.00 3.06
140 141 5.157395 TGATCCTTCCATCCTATCACATCA 58.843 41.667 0.00 0.00 0.00 3.07
141 142 5.752036 TGATCCTTCCATCCTATCACATC 57.248 43.478 0.00 0.00 0.00 3.06
142 143 6.273965 TGATTGATCCTTCCATCCTATCACAT 59.726 38.462 0.00 0.00 0.00 3.21
143 144 5.608015 TGATTGATCCTTCCATCCTATCACA 59.392 40.000 0.00 0.00 0.00 3.58
144 145 6.119240 TGATTGATCCTTCCATCCTATCAC 57.881 41.667 0.00 0.00 0.00 3.06
145 146 5.848369 ACTGATTGATCCTTCCATCCTATCA 59.152 40.000 0.00 0.00 0.00 2.15
146 147 6.371595 ACTGATTGATCCTTCCATCCTATC 57.628 41.667 0.00 0.00 0.00 2.08
147 148 6.240118 GGAACTGATTGATCCTTCCATCCTAT 60.240 42.308 10.49 0.00 34.83 2.57
148 149 5.072329 GGAACTGATTGATCCTTCCATCCTA 59.928 44.000 10.49 0.00 34.83 2.94
149 150 4.141298 GGAACTGATTGATCCTTCCATCCT 60.141 45.833 10.49 0.00 34.83 3.24
150 151 4.140536 GGAACTGATTGATCCTTCCATCC 58.859 47.826 10.49 0.00 34.83 3.51
151 152 5.046288 AGGAACTGATTGATCCTTCCATC 57.954 43.478 14.94 0.00 44.32 3.51
152 153 6.776887 ATAGGAACTGATTGATCCTTCCAT 57.223 37.500 14.94 7.68 44.32 3.41
153 154 6.581388 AATAGGAACTGATTGATCCTTCCA 57.419 37.500 14.94 6.38 44.32 3.53
154 155 7.777440 AGAAAATAGGAACTGATTGATCCTTCC 59.223 37.037 0.00 8.48 44.32 3.46
155 156 8.744568 AGAAAATAGGAACTGATTGATCCTTC 57.255 34.615 0.00 0.00 44.32 3.46
156 157 7.497249 CGAGAAAATAGGAACTGATTGATCCTT 59.503 37.037 0.00 0.00 44.32 3.36
158 159 6.986817 TCGAGAAAATAGGAACTGATTGATCC 59.013 38.462 0.00 0.00 41.52 3.36
159 160 7.492669 TGTCGAGAAAATAGGAACTGATTGATC 59.507 37.037 0.00 0.00 41.52 2.92
160 161 7.331026 TGTCGAGAAAATAGGAACTGATTGAT 58.669 34.615 0.00 0.00 41.52 2.57
161 162 6.697395 TGTCGAGAAAATAGGAACTGATTGA 58.303 36.000 0.00 0.00 41.52 2.57
162 163 6.968131 TGTCGAGAAAATAGGAACTGATTG 57.032 37.500 0.00 0.00 41.52 2.67
163 164 6.037610 GCATGTCGAGAAAATAGGAACTGATT 59.962 38.462 0.00 0.00 41.52 2.57
164 165 5.525378 GCATGTCGAGAAAATAGGAACTGAT 59.475 40.000 0.00 0.00 41.52 2.90
165 166 4.870426 GCATGTCGAGAAAATAGGAACTGA 59.130 41.667 0.00 0.00 41.52 3.41
166 167 4.631377 TGCATGTCGAGAAAATAGGAACTG 59.369 41.667 0.00 0.00 41.52 3.16
167 168 4.631813 GTGCATGTCGAGAAAATAGGAACT 59.368 41.667 0.00 0.00 46.37 3.01
168 169 4.492570 CGTGCATGTCGAGAAAATAGGAAC 60.493 45.833 0.00 0.00 0.00 3.62
169 170 3.616821 CGTGCATGTCGAGAAAATAGGAA 59.383 43.478 0.00 0.00 0.00 3.36
170 171 3.186909 CGTGCATGTCGAGAAAATAGGA 58.813 45.455 0.00 0.00 0.00 2.94
171 172 2.930040 ACGTGCATGTCGAGAAAATAGG 59.070 45.455 5.51 0.00 0.00 2.57
172 173 4.798907 AGTACGTGCATGTCGAGAAAATAG 59.201 41.667 16.44 0.00 0.00 1.73
173 174 4.740268 AGTACGTGCATGTCGAGAAAATA 58.260 39.130 16.44 0.00 0.00 1.40
174 175 3.585862 AGTACGTGCATGTCGAGAAAAT 58.414 40.909 16.44 0.00 0.00 1.82
175 176 3.021269 AGTACGTGCATGTCGAGAAAA 57.979 42.857 16.44 0.00 0.00 2.29
176 177 2.717580 AGTACGTGCATGTCGAGAAA 57.282 45.000 16.44 0.00 0.00 2.52
177 178 3.495193 GTTAGTACGTGCATGTCGAGAA 58.505 45.455 16.44 3.27 0.00 2.87
178 179 2.159476 GGTTAGTACGTGCATGTCGAGA 60.159 50.000 16.44 0.00 0.00 4.04
179 180 2.159421 AGGTTAGTACGTGCATGTCGAG 60.159 50.000 16.44 0.00 0.00 4.04
180 181 1.814394 AGGTTAGTACGTGCATGTCGA 59.186 47.619 16.44 0.00 0.00 4.20
181 182 1.917955 CAGGTTAGTACGTGCATGTCG 59.082 52.381 16.44 3.88 33.87 4.35
182 183 2.094390 TCCAGGTTAGTACGTGCATGTC 60.094 50.000 16.44 7.58 38.51 3.06
183 184 1.897133 TCCAGGTTAGTACGTGCATGT 59.103 47.619 17.19 17.19 38.51 3.21
184 185 2.665649 TCCAGGTTAGTACGTGCATG 57.334 50.000 6.38 3.82 38.51 4.06
185 186 3.259876 TCTTTCCAGGTTAGTACGTGCAT 59.740 43.478 6.38 0.00 38.51 3.96
186 187 2.629137 TCTTTCCAGGTTAGTACGTGCA 59.371 45.455 6.38 0.00 38.51 4.57
187 188 3.308438 TCTTTCCAGGTTAGTACGTGC 57.692 47.619 0.00 0.00 38.51 5.34
188 189 5.347907 GTGATTCTTTCCAGGTTAGTACGTG 59.652 44.000 0.00 0.00 39.32 4.49
189 190 5.011329 TGTGATTCTTTCCAGGTTAGTACGT 59.989 40.000 0.00 0.00 0.00 3.57
190 191 5.475719 TGTGATTCTTTCCAGGTTAGTACG 58.524 41.667 0.00 0.00 0.00 3.67
191 192 6.371825 CCTTGTGATTCTTTCCAGGTTAGTAC 59.628 42.308 0.00 0.00 0.00 2.73
192 193 6.472887 CCTTGTGATTCTTTCCAGGTTAGTA 58.527 40.000 0.00 0.00 0.00 1.82
193 194 5.316987 CCTTGTGATTCTTTCCAGGTTAGT 58.683 41.667 0.00 0.00 0.00 2.24
194 195 4.702131 CCCTTGTGATTCTTTCCAGGTTAG 59.298 45.833 0.00 0.00 0.00 2.34
195 196 4.352595 TCCCTTGTGATTCTTTCCAGGTTA 59.647 41.667 0.00 0.00 0.00 2.85
196 197 3.140144 TCCCTTGTGATTCTTTCCAGGTT 59.860 43.478 0.00 0.00 0.00 3.50
197 198 2.716424 TCCCTTGTGATTCTTTCCAGGT 59.284 45.455 0.00 0.00 0.00 4.00
198 199 3.439857 TCCCTTGTGATTCTTTCCAGG 57.560 47.619 0.00 0.00 0.00 4.45
199 200 4.592942 TGATCCCTTGTGATTCTTTCCAG 58.407 43.478 0.00 0.00 0.00 3.86
200 201 4.656100 TGATCCCTTGTGATTCTTTCCA 57.344 40.909 0.00 0.00 0.00 3.53
201 202 5.653769 TGATTGATCCCTTGTGATTCTTTCC 59.346 40.000 0.00 0.00 0.00 3.13
202 203 6.376581 ACTGATTGATCCCTTGTGATTCTTTC 59.623 38.462 0.00 0.00 0.00 2.62
203 204 6.251471 ACTGATTGATCCCTTGTGATTCTTT 58.749 36.000 0.00 0.00 0.00 2.52
204 205 5.824421 ACTGATTGATCCCTTGTGATTCTT 58.176 37.500 0.00 0.00 0.00 2.52
205 206 5.435291 GACTGATTGATCCCTTGTGATTCT 58.565 41.667 0.00 0.00 0.00 2.40
206 207 4.578105 GGACTGATTGATCCCTTGTGATTC 59.422 45.833 0.00 0.00 0.00 2.52
207 208 4.530875 GGACTGATTGATCCCTTGTGATT 58.469 43.478 0.00 0.00 0.00 2.57
208 209 3.432749 CGGACTGATTGATCCCTTGTGAT 60.433 47.826 0.00 0.00 0.00 3.06
209 210 2.093500 CGGACTGATTGATCCCTTGTGA 60.093 50.000 0.00 0.00 0.00 3.58
210 211 2.283298 CGGACTGATTGATCCCTTGTG 58.717 52.381 0.00 0.00 0.00 3.33
211 212 1.909302 ACGGACTGATTGATCCCTTGT 59.091 47.619 0.00 0.00 0.00 3.16
212 213 2.698855 ACGGACTGATTGATCCCTTG 57.301 50.000 0.00 0.00 0.00 3.61
213 214 3.721087 AAACGGACTGATTGATCCCTT 57.279 42.857 0.00 0.00 0.00 3.95
214 215 3.721087 AAAACGGACTGATTGATCCCT 57.279 42.857 0.00 0.00 0.00 4.20
243 244 2.805353 CGAGGAAGGACGTGCACG 60.805 66.667 35.99 35.99 46.33 5.34
244 245 3.112709 GCGAGGAAGGACGTGCAC 61.113 66.667 10.52 6.82 0.00 4.57
245 246 3.303135 AGCGAGGAAGGACGTGCA 61.303 61.111 10.52 0.00 0.00 4.57
246 247 2.811317 CAGCGAGGAAGGACGTGC 60.811 66.667 0.00 0.00 0.00 5.34
247 248 2.811317 GCAGCGAGGAAGGACGTG 60.811 66.667 0.00 0.00 0.00 4.49
248 249 4.421479 CGCAGCGAGGAAGGACGT 62.421 66.667 9.98 0.00 0.00 4.34
249 250 4.421479 ACGCAGCGAGGAAGGACG 62.421 66.667 24.65 0.00 0.00 4.79
250 251 2.811317 CACGCAGCGAGGAAGGAC 60.811 66.667 24.65 0.00 0.00 3.85
251 252 2.989253 TCACGCAGCGAGGAAGGA 60.989 61.111 24.65 5.90 0.00 3.36
252 253 2.507992 CTCACGCAGCGAGGAAGG 60.508 66.667 24.65 4.07 32.26 3.46
261 262 4.463879 CCTGAGGGCCTCACGCAG 62.464 72.222 32.01 21.30 40.31 5.18
271 272 3.775654 GGACGTCTGGCCTGAGGG 61.776 72.222 28.83 19.11 0.00 4.30
272 273 2.997315 TGGACGTCTGGCCTGAGG 60.997 66.667 25.41 25.41 0.00 3.86
273 274 2.575993 CTGGACGTCTGGCCTGAG 59.424 66.667 16.46 9.68 0.00 3.35
274 275 3.695606 GCTGGACGTCTGGCCTGA 61.696 66.667 16.46 8.48 0.00 3.86
275 276 1.888436 TAAGCTGGACGTCTGGCCTG 61.888 60.000 22.35 2.92 0.00 4.85
276 277 1.192146 TTAAGCTGGACGTCTGGCCT 61.192 55.000 22.35 15.72 0.00 5.19
277 278 0.107654 ATTAAGCTGGACGTCTGGCC 60.108 55.000 22.35 0.00 0.00 5.36
278 279 1.739067 AATTAAGCTGGACGTCTGGC 58.261 50.000 16.46 18.52 0.00 4.85
279 280 4.766404 AAAAATTAAGCTGGACGTCTGG 57.234 40.909 16.46 9.54 0.00 3.86
302 303 9.632807 CCAATATGTTTTCCGTGATAAAAGAAA 57.367 29.630 0.00 0.00 0.00 2.52
303 304 8.247562 CCCAATATGTTTTCCGTGATAAAAGAA 58.752 33.333 0.00 0.00 0.00 2.52
304 305 7.629652 GCCCAATATGTTTTCCGTGATAAAAGA 60.630 37.037 0.00 0.00 0.00 2.52
305 306 6.475402 GCCCAATATGTTTTCCGTGATAAAAG 59.525 38.462 0.00 0.00 0.00 2.27
306 307 6.334202 GCCCAATATGTTTTCCGTGATAAAA 58.666 36.000 0.00 0.00 0.00 1.52
307 308 5.163499 GGCCCAATATGTTTTCCGTGATAAA 60.163 40.000 0.00 0.00 0.00 1.40
308 309 4.339814 GGCCCAATATGTTTTCCGTGATAA 59.660 41.667 0.00 0.00 0.00 1.75
309 310 3.886505 GGCCCAATATGTTTTCCGTGATA 59.113 43.478 0.00 0.00 0.00 2.15
310 311 2.693074 GGCCCAATATGTTTTCCGTGAT 59.307 45.455 0.00 0.00 0.00 3.06
311 312 2.096248 GGCCCAATATGTTTTCCGTGA 58.904 47.619 0.00 0.00 0.00 4.35
312 313 1.821753 TGGCCCAATATGTTTTCCGTG 59.178 47.619 0.00 0.00 0.00 4.94
313 314 2.223803 TGGCCCAATATGTTTTCCGT 57.776 45.000 0.00 0.00 0.00 4.69
314 315 3.305335 GCTATGGCCCAATATGTTTTCCG 60.305 47.826 0.00 0.00 0.00 4.30
315 316 4.257267 GCTATGGCCCAATATGTTTTCC 57.743 45.455 0.00 0.00 0.00 3.13
329 330 4.020543 AGAGTATACAGCTAGGCTATGGC 58.979 47.826 5.50 0.00 36.40 4.40
330 331 4.400884 CCAGAGTATACAGCTAGGCTATGG 59.599 50.000 5.50 0.00 36.40 2.74
331 332 4.400884 CCCAGAGTATACAGCTAGGCTATG 59.599 50.000 5.50 0.00 36.40 2.23
332 333 4.570933 CCCCAGAGTATACAGCTAGGCTAT 60.571 50.000 5.50 0.00 36.40 2.97
333 334 3.245300 CCCCAGAGTATACAGCTAGGCTA 60.245 52.174 5.50 0.00 36.40 3.93
334 335 2.491825 CCCCAGAGTATACAGCTAGGCT 60.492 54.545 5.50 0.00 40.77 4.58
335 336 1.896465 CCCCAGAGTATACAGCTAGGC 59.104 57.143 5.50 0.00 0.00 3.93
336 337 3.426615 CTCCCCAGAGTATACAGCTAGG 58.573 54.545 5.50 4.66 35.21 3.02
337 338 3.426615 CCTCCCCAGAGTATACAGCTAG 58.573 54.545 5.50 0.00 38.58 3.42
338 339 2.110188 CCCTCCCCAGAGTATACAGCTA 59.890 54.545 5.50 0.00 38.58 3.32
339 340 1.133009 CCCTCCCCAGAGTATACAGCT 60.133 57.143 5.50 0.00 38.58 4.24
340 341 1.343069 CCCTCCCCAGAGTATACAGC 58.657 60.000 5.50 0.00 38.58 4.40
341 342 1.343069 GCCCTCCCCAGAGTATACAG 58.657 60.000 5.50 0.00 38.58 2.74
342 343 0.105142 GGCCCTCCCCAGAGTATACA 60.105 60.000 5.50 0.00 38.58 2.29
343 344 0.191314 AGGCCCTCCCCAGAGTATAC 59.809 60.000 0.00 0.00 38.58 1.47
344 345 0.487772 GAGGCCCTCCCCAGAGTATA 59.512 60.000 0.00 0.00 38.58 1.47
345 346 1.237458 GAGGCCCTCCCCAGAGTAT 59.763 63.158 0.00 0.00 38.58 2.12
346 347 2.696893 GAGGCCCTCCCCAGAGTA 59.303 66.667 0.00 0.00 38.58 2.59
347 348 4.423209 GGAGGCCCTCCCCAGAGT 62.423 72.222 19.95 0.00 44.36 3.24
357 358 1.453928 CCCAAAATCGAGGAGGCCC 60.454 63.158 0.00 0.00 0.00 5.80
358 359 1.453928 CCCCAAAATCGAGGAGGCC 60.454 63.158 0.00 0.00 0.00 5.19
359 360 1.453928 CCCCCAAAATCGAGGAGGC 60.454 63.158 0.00 0.00 0.00 4.70
360 361 1.453928 GCCCCCAAAATCGAGGAGG 60.454 63.158 0.00 0.00 0.00 4.30
361 362 1.453928 GGCCCCCAAAATCGAGGAG 60.454 63.158 0.00 0.00 0.00 3.69
362 363 2.680965 GGCCCCCAAAATCGAGGA 59.319 61.111 0.00 0.00 0.00 3.71
363 364 2.442087 GGGCCCCCAAAATCGAGG 60.442 66.667 12.23 0.00 35.81 4.63
364 365 2.828549 CGGGCCCCCAAAATCGAG 60.829 66.667 18.66 0.00 35.37 4.04
365 366 4.434354 CCGGGCCCCCAAAATCGA 62.434 66.667 18.66 0.00 35.37 3.59
451 452 2.034879 ATTTGACTCGGCGCCTGTG 61.035 57.895 26.68 19.89 0.00 3.66
452 453 2.034879 CATTTGACTCGGCGCCTGT 61.035 57.895 26.68 22.65 0.00 4.00
453 454 2.787249 CATTTGACTCGGCGCCTG 59.213 61.111 26.68 19.36 0.00 4.85
454 455 3.127533 GCATTTGACTCGGCGCCT 61.128 61.111 26.68 5.36 0.00 5.52
455 456 4.520846 CGCATTTGACTCGGCGCC 62.521 66.667 19.07 19.07 43.14 6.53
458 459 1.425428 CTTCCGCATTTGACTCGGC 59.575 57.895 0.00 0.00 42.65 5.54
459 460 1.021390 AGCTTCCGCATTTGACTCGG 61.021 55.000 0.00 0.00 44.16 4.63
460 461 0.798776 AAGCTTCCGCATTTGACTCG 59.201 50.000 0.00 0.00 39.10 4.18
461 462 2.589014 CAAAGCTTCCGCATTTGACTC 58.411 47.619 0.00 0.00 36.89 3.36
462 463 1.270550 CCAAAGCTTCCGCATTTGACT 59.729 47.619 0.00 0.00 36.89 3.41
463 464 1.000274 ACCAAAGCTTCCGCATTTGAC 60.000 47.619 0.00 0.00 36.89 3.18
464 465 1.269448 GACCAAAGCTTCCGCATTTGA 59.731 47.619 0.00 0.00 36.89 2.69
465 466 1.701704 GACCAAAGCTTCCGCATTTG 58.298 50.000 0.00 0.00 39.10 2.32
466 467 0.240945 CGACCAAAGCTTCCGCATTT 59.759 50.000 0.00 0.00 39.10 2.32
467 468 0.605319 TCGACCAAAGCTTCCGCATT 60.605 50.000 0.00 0.00 39.10 3.56
468 469 1.003839 TCGACCAAAGCTTCCGCAT 60.004 52.632 0.00 0.00 39.10 4.73
469 470 1.959226 GTCGACCAAAGCTTCCGCA 60.959 57.895 3.51 0.00 39.10 5.69
470 471 2.677979 GGTCGACCAAAGCTTCCGC 61.678 63.158 29.75 0.00 35.64 5.54
471 472 2.033194 GGGTCGACCAAAGCTTCCG 61.033 63.158 34.40 1.72 39.85 4.30
472 473 3.982829 GGGTCGACCAAAGCTTCC 58.017 61.111 34.40 12.03 39.85 3.46
481 482 0.814812 TTTGTCCGTTTGGGTCGACC 60.815 55.000 27.04 27.04 40.81 4.79
482 483 1.015868 TTTTGTCCGTTTGGGTCGAC 58.984 50.000 7.13 7.13 37.00 4.20
483 484 1.671845 CTTTTTGTCCGTTTGGGTCGA 59.328 47.619 0.00 0.00 37.00 4.20
484 485 1.862411 GCTTTTTGTCCGTTTGGGTCG 60.862 52.381 0.00 0.00 37.00 4.79
485 486 1.847818 GCTTTTTGTCCGTTTGGGTC 58.152 50.000 0.00 0.00 37.00 4.46
486 487 0.101579 CGCTTTTTGTCCGTTTGGGT 59.898 50.000 0.00 0.00 37.00 4.51
487 488 0.596341 CCGCTTTTTGTCCGTTTGGG 60.596 55.000 0.00 0.00 35.24 4.12
488 489 0.382515 TCCGCTTTTTGTCCGTTTGG 59.617 50.000 0.00 0.00 0.00 3.28
489 490 1.472990 GTCCGCTTTTTGTCCGTTTG 58.527 50.000 0.00 0.00 0.00 2.93
490 491 0.028374 CGTCCGCTTTTTGTCCGTTT 59.972 50.000 0.00 0.00 0.00 3.60
491 492 0.810823 TCGTCCGCTTTTTGTCCGTT 60.811 50.000 0.00 0.00 0.00 4.44
492 493 0.810823 TTCGTCCGCTTTTTGTCCGT 60.811 50.000 0.00 0.00 0.00 4.69
493 494 0.305313 TTTCGTCCGCTTTTTGTCCG 59.695 50.000 0.00 0.00 0.00 4.79
494 495 2.699251 ATTTCGTCCGCTTTTTGTCC 57.301 45.000 0.00 0.00 0.00 4.02
495 496 3.368495 ACAATTTCGTCCGCTTTTTGTC 58.632 40.909 0.00 0.00 0.00 3.18
496 497 3.368495 GACAATTTCGTCCGCTTTTTGT 58.632 40.909 0.00 0.00 0.00 2.83
497 498 2.400408 CGACAATTTCGTCCGCTTTTTG 59.600 45.455 2.97 0.00 43.24 2.44
498 499 2.646250 CGACAATTTCGTCCGCTTTTT 58.354 42.857 2.97 0.00 43.24 1.94
499 500 2.309898 CGACAATTTCGTCCGCTTTT 57.690 45.000 2.97 0.00 43.24 2.27
508 509 3.943661 ACCCAAACGGACGACAATTTCG 61.944 50.000 0.00 8.01 44.27 3.46
509 510 1.605232 ACCCAAACGGACGACAATTTC 59.395 47.619 0.00 0.00 34.64 2.17
510 511 1.605232 GACCCAAACGGACGACAATTT 59.395 47.619 0.00 0.00 34.64 1.82
511 512 1.232119 GACCCAAACGGACGACAATT 58.768 50.000 0.00 0.00 34.64 2.32
512 513 2.922779 GACCCAAACGGACGACAAT 58.077 52.632 0.00 0.00 34.64 2.71
513 514 4.442018 GACCCAAACGGACGACAA 57.558 55.556 0.00 0.00 34.64 3.18
521 522 2.593436 AACAGGCCGACCCAAACG 60.593 61.111 0.00 0.00 36.11 3.60
522 523 2.561037 CCAACAGGCCGACCCAAAC 61.561 63.158 0.00 0.00 36.11 2.93
523 524 2.203422 CCAACAGGCCGACCCAAA 60.203 61.111 0.00 0.00 36.11 3.28
524 525 3.172106 TCCAACAGGCCGACCCAA 61.172 61.111 0.00 0.00 36.11 4.12
525 526 3.636231 CTCCAACAGGCCGACCCA 61.636 66.667 0.00 0.00 36.11 4.51
526 527 3.192103 AACTCCAACAGGCCGACCC 62.192 63.158 0.00 0.00 36.11 4.46
527 528 1.966451 CAACTCCAACAGGCCGACC 60.966 63.158 0.00 0.00 0.00 4.79
528 529 2.617274 GCAACTCCAACAGGCCGAC 61.617 63.158 0.00 0.00 0.00 4.79
529 530 2.281484 GCAACTCCAACAGGCCGA 60.281 61.111 0.00 0.00 0.00 5.54
530 531 2.281761 AGCAACTCCAACAGGCCG 60.282 61.111 0.00 0.00 0.00 6.13
531 532 0.324943 TAGAGCAACTCCAACAGGCC 59.675 55.000 0.00 0.00 0.00 5.19
532 533 2.079925 CTTAGAGCAACTCCAACAGGC 58.920 52.381 0.00 0.00 0.00 4.85
533 534 2.303022 TCCTTAGAGCAACTCCAACAGG 59.697 50.000 0.00 0.00 0.00 4.00
534 535 3.685139 TCCTTAGAGCAACTCCAACAG 57.315 47.619 0.00 0.00 0.00 3.16
535 536 3.646162 TCTTCCTTAGAGCAACTCCAACA 59.354 43.478 0.00 0.00 0.00 3.33
536 537 4.273148 TCTTCCTTAGAGCAACTCCAAC 57.727 45.455 0.00 0.00 0.00 3.77
537 538 4.974645 TTCTTCCTTAGAGCAACTCCAA 57.025 40.909 0.00 0.00 33.51 3.53
538 539 4.974645 TTTCTTCCTTAGAGCAACTCCA 57.025 40.909 0.00 0.00 33.51 3.86
539 540 5.552178 TCTTTTCTTCCTTAGAGCAACTCC 58.448 41.667 0.00 0.00 33.51 3.85
540 541 7.680442 ATTCTTTTCTTCCTTAGAGCAACTC 57.320 36.000 0.00 0.00 33.51 3.01
541 542 8.379331 ACTATTCTTTTCTTCCTTAGAGCAACT 58.621 33.333 0.00 0.00 33.51 3.16
542 543 8.554835 ACTATTCTTTTCTTCCTTAGAGCAAC 57.445 34.615 0.00 0.00 33.51 4.17
543 544 9.220767 GAACTATTCTTTTCTTCCTTAGAGCAA 57.779 33.333 0.00 0.00 33.51 3.91
544 545 8.598041 AGAACTATTCTTTTCTTCCTTAGAGCA 58.402 33.333 0.00 0.00 36.36 4.26
593 594 8.426881 TGTAAAATGCTGCGTTATACTAATCA 57.573 30.769 7.64 0.00 0.00 2.57
596 597 7.129622 GCATGTAAAATGCTGCGTTATACTAA 58.870 34.615 7.64 0.00 41.52 2.24
597 598 6.655062 GCATGTAAAATGCTGCGTTATACTA 58.345 36.000 7.64 0.00 41.52 1.82
598 599 5.510671 GCATGTAAAATGCTGCGTTATACT 58.489 37.500 7.64 0.00 41.52 2.12
599 600 5.789774 GCATGTAAAATGCTGCGTTATAC 57.210 39.130 7.64 3.34 41.52 1.47
711 712 5.477607 TTGGTTGCTTGCTTCTAGTACTA 57.522 39.130 1.89 1.89 0.00 1.82
712 713 4.351874 TTGGTTGCTTGCTTCTAGTACT 57.648 40.909 0.00 0.00 0.00 2.73
713 714 5.629079 ATTTGGTTGCTTGCTTCTAGTAC 57.371 39.130 0.00 0.00 0.00 2.73
716 717 7.814107 TGAAATAATTTGGTTGCTTGCTTCTAG 59.186 33.333 0.00 0.00 0.00 2.43
726 730 6.036577 TCTTCCCTGAAATAATTTGGTTGC 57.963 37.500 0.00 0.00 0.00 4.17
756 760 1.202336 GGCAGTGCTGATTAATGGTGC 60.202 52.381 16.11 0.00 0.00 5.01
896 900 2.991540 GTTTCTGTGGGGCTGGGC 60.992 66.667 0.00 0.00 0.00 5.36
901 905 1.795951 TTAGGGGGTTTCTGTGGGGC 61.796 60.000 0.00 0.00 0.00 5.80
914 918 2.276740 CCTTGGCTGGCTTAGGGG 59.723 66.667 12.82 1.16 0.00 4.79
926 930 1.001641 CAGAGGGAGGTTGCCTTGG 60.002 63.158 0.00 0.00 38.79 3.61
949 953 4.436998 GTGCGTCTCCGTCTGGGG 62.437 72.222 0.00 0.00 36.91 4.96
950 954 3.680786 TGTGCGTCTCCGTCTGGG 61.681 66.667 0.00 0.00 36.15 4.45
951 955 2.430921 GTGTGCGTCTCCGTCTGG 60.431 66.667 0.00 0.00 36.15 3.86
952 956 2.801162 CGTGTGCGTCTCCGTCTG 60.801 66.667 0.00 0.00 36.15 3.51
953 957 4.702081 GCGTGTGCGTCTCCGTCT 62.702 66.667 0.00 0.00 40.81 4.18
963 967 3.106407 GACCTCGTGAGCGTGTGC 61.106 66.667 0.00 0.00 43.24 4.57
964 968 2.430921 GGACCTCGTGAGCGTGTG 60.431 66.667 0.00 0.00 39.49 3.82
1377 1394 2.461945 CGGAGCAGCAGCATGTCAG 61.462 63.158 3.17 0.00 45.49 3.51
1445 1466 2.205243 GAAAAGAAGCAGCGCAGGGG 62.205 60.000 11.47 0.00 0.00 4.79
1465 1486 3.575687 AGGAAAGGATCAAAGCAACCAAG 59.424 43.478 0.00 0.00 0.00 3.61
1521 1547 4.140536 GCCATTTTCTCCCCTCTCATAAG 58.859 47.826 0.00 0.00 0.00 1.73
1522 1548 3.527253 TGCCATTTTCTCCCCTCTCATAA 59.473 43.478 0.00 0.00 0.00 1.90
1529 1555 2.250924 CAAGTTGCCATTTTCTCCCCT 58.749 47.619 0.00 0.00 0.00 4.79
1578 3148 8.906867 CCCATTCAACTCAATTTGTACTCATAT 58.093 33.333 0.00 0.00 0.00 1.78
1593 3163 2.044946 AGCCGGCCCATTCAACTC 60.045 61.111 26.15 0.00 0.00 3.01
1681 3277 2.368875 AGAAGAGCCTCGTCTTTCCAAA 59.631 45.455 4.20 0.00 36.89 3.28
1693 3289 2.158667 TGGGAAACGAAAAGAAGAGCCT 60.159 45.455 0.00 0.00 0.00 4.58
1698 3294 6.803154 AGTATTCTGGGAAACGAAAAGAAG 57.197 37.500 0.00 0.00 30.90 2.85
1707 3303 3.007635 CACGGGAAGTATTCTGGGAAAC 58.992 50.000 0.00 0.00 46.56 2.78
1716 3312 6.826741 ACAACTTAATATGCACGGGAAGTATT 59.173 34.615 0.00 0.28 0.00 1.89
1741 3337 6.106673 GCTTGAGCCATCTTTGTTAGTACTA 58.893 40.000 0.00 0.00 34.31 1.82
1742 3338 4.938226 GCTTGAGCCATCTTTGTTAGTACT 59.062 41.667 0.00 0.00 34.31 2.73
1743 3339 4.201724 CGCTTGAGCCATCTTTGTTAGTAC 60.202 45.833 0.00 0.00 37.91 2.73
1744 3340 3.932710 CGCTTGAGCCATCTTTGTTAGTA 59.067 43.478 0.00 0.00 37.91 1.82
1745 3341 2.744202 CGCTTGAGCCATCTTTGTTAGT 59.256 45.455 0.00 0.00 37.91 2.24
1746 3342 3.002791 TCGCTTGAGCCATCTTTGTTAG 58.997 45.455 0.00 0.00 37.91 2.34
1758 3354 1.135859 CACAGGTTGATTCGCTTGAGC 60.136 52.381 0.00 0.00 37.78 4.26
1759 3355 1.466167 CCACAGGTTGATTCGCTTGAG 59.534 52.381 0.00 0.00 0.00 3.02
1760 3356 1.202758 ACCACAGGTTGATTCGCTTGA 60.203 47.619 0.00 0.00 27.29 3.02
1761 3357 1.238439 ACCACAGGTTGATTCGCTTG 58.762 50.000 0.00 0.00 27.29 4.01
1762 3358 1.981256 AACCACAGGTTGATTCGCTT 58.019 45.000 0.00 0.00 45.07 4.68
1763 3359 3.725754 AACCACAGGTTGATTCGCT 57.274 47.368 0.00 0.00 45.07 4.93
1772 3368 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
1773 3369 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
1774 3370 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
1775 3371 2.422235 CCACCTAACCAACTCAACCACA 60.422 50.000 0.00 0.00 0.00 4.17
1776 3372 2.158726 TCCACCTAACCAACTCAACCAC 60.159 50.000 0.00 0.00 0.00 4.16
1777 3373 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
1778 3374 2.943036 TCCACCTAACCAACTCAACC 57.057 50.000 0.00 0.00 0.00 3.77
1779 3375 4.935808 CACTATCCACCTAACCAACTCAAC 59.064 45.833 0.00 0.00 0.00 3.18
1780 3376 4.019681 CCACTATCCACCTAACCAACTCAA 60.020 45.833 0.00 0.00 0.00 3.02
1781 3377 3.517901 CCACTATCCACCTAACCAACTCA 59.482 47.826 0.00 0.00 0.00 3.41
1782 3378 3.518303 ACCACTATCCACCTAACCAACTC 59.482 47.826 0.00 0.00 0.00 3.01
1783 3379 3.527937 ACCACTATCCACCTAACCAACT 58.472 45.455 0.00 0.00 0.00 3.16
1784 3380 3.994931 ACCACTATCCACCTAACCAAC 57.005 47.619 0.00 0.00 0.00 3.77
1785 3381 4.657039 GGATACCACTATCCACCTAACCAA 59.343 45.833 2.40 0.00 45.82 3.67
1786 3382 4.228824 GGATACCACTATCCACCTAACCA 58.771 47.826 2.40 0.00 45.82 3.67
1787 3383 4.886496 GGATACCACTATCCACCTAACC 57.114 50.000 2.40 0.00 45.82 2.85
1814 3410 3.194116 CACCAGAATTTGAACCCTGATGG 59.806 47.826 0.00 0.00 41.37 3.51
1815 3411 3.367703 GCACCAGAATTTGAACCCTGATG 60.368 47.826 0.00 0.00 0.00 3.07
1816 3412 2.827921 GCACCAGAATTTGAACCCTGAT 59.172 45.455 0.00 0.00 0.00 2.90
1817 3413 2.158475 AGCACCAGAATTTGAACCCTGA 60.158 45.455 0.00 0.00 0.00 3.86
1818 3414 2.229784 GAGCACCAGAATTTGAACCCTG 59.770 50.000 0.00 0.00 0.00 4.45
1819 3415 2.519013 GAGCACCAGAATTTGAACCCT 58.481 47.619 0.00 0.00 0.00 4.34
1820 3416 1.200020 CGAGCACCAGAATTTGAACCC 59.800 52.381 0.00 0.00 0.00 4.11
1821 3417 1.401539 GCGAGCACCAGAATTTGAACC 60.402 52.381 0.00 0.00 0.00 3.62
1822 3418 1.266718 TGCGAGCACCAGAATTTGAAC 59.733 47.619 0.00 0.00 0.00 3.18
1823 3419 1.603456 TGCGAGCACCAGAATTTGAA 58.397 45.000 0.00 0.00 0.00 2.69
1824 3420 1.825090 ATGCGAGCACCAGAATTTGA 58.175 45.000 0.00 0.00 0.00 2.69
1825 3421 2.642139 AATGCGAGCACCAGAATTTG 57.358 45.000 0.00 0.00 0.00 2.32
1826 3422 4.202050 GGAATAATGCGAGCACCAGAATTT 60.202 41.667 0.00 0.00 0.00 1.82
1827 3423 3.316308 GGAATAATGCGAGCACCAGAATT 59.684 43.478 0.00 0.00 0.00 2.17
1828 3424 2.880890 GGAATAATGCGAGCACCAGAAT 59.119 45.455 0.00 0.00 0.00 2.40
1829 3425 2.092968 AGGAATAATGCGAGCACCAGAA 60.093 45.455 0.00 0.00 0.00 3.02
1830 3426 1.486310 AGGAATAATGCGAGCACCAGA 59.514 47.619 0.00 0.00 0.00 3.86
1831 3427 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
1832 3428 1.209261 TCAGGAATAATGCGAGCACCA 59.791 47.619 0.00 0.00 0.00 4.17
1833 3429 1.953559 TCAGGAATAATGCGAGCACC 58.046 50.000 0.00 0.00 0.00 5.01
1834 3430 4.558538 AATTCAGGAATAATGCGAGCAC 57.441 40.909 0.00 0.00 0.00 4.40
1835 3431 6.882610 ATAAATTCAGGAATAATGCGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
1836 3432 7.862372 TGAAATAAATTCAGGAATAATGCGAGC 59.138 33.333 0.00 0.00 43.08 5.03
1850 3446 8.116651 TCACCGGAAATTCTGAAATAAATTCA 57.883 30.769 9.46 0.00 45.71 2.57
1851 3447 9.023967 CATCACCGGAAATTCTGAAATAAATTC 57.976 33.333 9.46 0.00 38.60 2.17
1852 3448 7.492344 GCATCACCGGAAATTCTGAAATAAATT 59.508 33.333 9.46 0.00 0.00 1.82
1853 3449 6.980397 GCATCACCGGAAATTCTGAAATAAAT 59.020 34.615 9.46 0.00 0.00 1.40
1854 3450 6.329496 GCATCACCGGAAATTCTGAAATAAA 58.671 36.000 9.46 0.00 0.00 1.40
1855 3451 5.448496 CGCATCACCGGAAATTCTGAAATAA 60.448 40.000 9.46 0.00 0.00 1.40
1856 3452 4.035091 CGCATCACCGGAAATTCTGAAATA 59.965 41.667 9.46 0.00 0.00 1.40
1857 3453 3.181497 CGCATCACCGGAAATTCTGAAAT 60.181 43.478 9.46 0.00 0.00 2.17
1858 3454 2.161410 CGCATCACCGGAAATTCTGAAA 59.839 45.455 9.46 0.00 0.00 2.69
1859 3455 1.737236 CGCATCACCGGAAATTCTGAA 59.263 47.619 9.46 0.00 0.00 3.02
1860 3456 1.368641 CGCATCACCGGAAATTCTGA 58.631 50.000 9.46 0.00 0.00 3.27
1861 3457 0.248215 GCGCATCACCGGAAATTCTG 60.248 55.000 9.46 0.00 0.00 3.02
1862 3458 0.392998 AGCGCATCACCGGAAATTCT 60.393 50.000 9.46 0.00 0.00 2.40
1863 3459 0.451783 AAGCGCATCACCGGAAATTC 59.548 50.000 9.46 0.00 0.00 2.17
1864 3460 0.887933 AAAGCGCATCACCGGAAATT 59.112 45.000 9.46 0.00 0.00 1.82
1865 3461 0.451783 GAAAGCGCATCACCGGAAAT 59.548 50.000 9.46 0.00 0.00 2.17
1866 3462 0.886938 TGAAAGCGCATCACCGGAAA 60.887 50.000 9.46 0.00 0.00 3.13
1867 3463 1.298157 CTGAAAGCGCATCACCGGAA 61.298 55.000 9.46 0.00 0.00 4.30
1868 3464 1.741401 CTGAAAGCGCATCACCGGA 60.741 57.895 9.46 0.00 0.00 5.14
1869 3465 2.753966 CCTGAAAGCGCATCACCGG 61.754 63.158 11.47 8.55 0.00 5.28
1870 3466 1.741401 TCCTGAAAGCGCATCACCG 60.741 57.895 11.47 4.81 0.00 4.94
1871 3467 1.796796 GTCCTGAAAGCGCATCACC 59.203 57.895 11.47 0.00 0.00 4.02
1872 3468 1.014044 TCGTCCTGAAAGCGCATCAC 61.014 55.000 11.47 1.27 0.00 3.06
1873 3469 0.737367 CTCGTCCTGAAAGCGCATCA 60.737 55.000 11.47 13.15 0.00 3.07
1874 3470 1.424493 CCTCGTCCTGAAAGCGCATC 61.424 60.000 11.47 8.39 0.00 3.91
1875 3471 1.448540 CCTCGTCCTGAAAGCGCAT 60.449 57.895 11.47 0.00 0.00 4.73
1876 3472 2.048222 CCTCGTCCTGAAAGCGCA 60.048 61.111 11.47 0.00 0.00 6.09
1877 3473 3.491652 GCCTCGTCCTGAAAGCGC 61.492 66.667 0.00 0.00 0.00 5.92
1878 3474 3.181967 CGCCTCGTCCTGAAAGCG 61.182 66.667 0.00 0.00 41.29 4.68
1879 3475 3.491652 GCGCCTCGTCCTGAAAGC 61.492 66.667 0.00 0.00 0.00 3.51
1880 3476 1.945354 TAGGCGCCTCGTCCTGAAAG 61.945 60.000 36.73 0.00 35.69 2.62
1881 3477 1.980232 TAGGCGCCTCGTCCTGAAA 60.980 57.895 36.73 9.43 35.69 2.69
1882 3478 2.361992 TAGGCGCCTCGTCCTGAA 60.362 61.111 36.73 10.36 35.69 3.02
1883 3479 3.138798 GTAGGCGCCTCGTCCTGA 61.139 66.667 36.73 11.30 35.69 3.86
1884 3480 4.554363 CGTAGGCGCCTCGTCCTG 62.554 72.222 36.73 13.61 35.69 3.86
1905 3501 9.988815 AGCATATCATCTTAAGATTTACGAAGT 57.011 29.630 15.49 0.00 37.29 3.01
1907 3503 9.208022 CCAGCATATCATCTTAAGATTTACGAA 57.792 33.333 15.49 0.00 31.21 3.85
1908 3504 7.331934 GCCAGCATATCATCTTAAGATTTACGA 59.668 37.037 15.49 10.07 31.21 3.43
1909 3505 7.332926 AGCCAGCATATCATCTTAAGATTTACG 59.667 37.037 15.49 4.82 31.21 3.18
1910 3506 8.558973 AGCCAGCATATCATCTTAAGATTTAC 57.441 34.615 15.49 2.97 31.21 2.01
1911 3507 8.377799 TGAGCCAGCATATCATCTTAAGATTTA 58.622 33.333 15.49 10.60 31.21 1.40
1912 3508 7.229308 TGAGCCAGCATATCATCTTAAGATTT 58.771 34.615 15.49 8.78 31.21 2.17
1913 3509 6.776744 TGAGCCAGCATATCATCTTAAGATT 58.223 36.000 15.49 5.12 31.21 2.40
1914 3510 6.013553 ACTGAGCCAGCATATCATCTTAAGAT 60.014 38.462 12.37 12.37 34.37 2.40
1915 3511 5.306419 ACTGAGCCAGCATATCATCTTAAGA 59.694 40.000 7.82 7.82 34.37 2.10
1916 3512 5.549347 ACTGAGCCAGCATATCATCTTAAG 58.451 41.667 0.00 0.00 34.37 1.85
1917 3513 5.306419 AGACTGAGCCAGCATATCATCTTAA 59.694 40.000 2.50 0.00 34.37 1.85
1918 3514 4.837298 AGACTGAGCCAGCATATCATCTTA 59.163 41.667 2.50 0.00 34.37 2.10
1919 3515 3.647113 AGACTGAGCCAGCATATCATCTT 59.353 43.478 2.50 0.00 34.37 2.40
1920 3516 3.241156 AGACTGAGCCAGCATATCATCT 58.759 45.455 2.50 0.00 34.37 2.90
1921 3517 3.681593 AGACTGAGCCAGCATATCATC 57.318 47.619 2.50 0.00 34.37 2.92
1922 3518 4.387598 GAAAGACTGAGCCAGCATATCAT 58.612 43.478 2.50 0.00 34.37 2.45
1923 3519 3.739209 CGAAAGACTGAGCCAGCATATCA 60.739 47.826 2.50 0.00 34.37 2.15
1924 3520 2.799412 CGAAAGACTGAGCCAGCATATC 59.201 50.000 2.50 0.00 34.37 1.63
1925 3521 2.484417 CCGAAAGACTGAGCCAGCATAT 60.484 50.000 2.50 0.00 34.37 1.78
1926 3522 1.134699 CCGAAAGACTGAGCCAGCATA 60.135 52.381 2.50 0.00 34.37 3.14
1927 3523 0.392193 CCGAAAGACTGAGCCAGCAT 60.392 55.000 2.50 0.00 34.37 3.79
1928 3524 1.004560 CCGAAAGACTGAGCCAGCA 60.005 57.895 2.50 0.00 34.37 4.41
1929 3525 0.739112 CTCCGAAAGACTGAGCCAGC 60.739 60.000 2.50 0.00 34.37 4.85
1930 3526 0.108424 CCTCCGAAAGACTGAGCCAG 60.108 60.000 1.16 1.16 37.52 4.85
1931 3527 0.832135 ACCTCCGAAAGACTGAGCCA 60.832 55.000 0.00 0.00 0.00 4.75
1932 3528 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
1933 3529 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
1934 3530 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
1935 3531 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
1936 3532 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
1937 3533 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
1938 3534 2.961526 TATGAGCACCTCCGAAAGAC 57.038 50.000 0.00 0.00 0.00 3.01
1939 3535 2.168521 CCTTATGAGCACCTCCGAAAGA 59.831 50.000 0.00 0.00 0.00 2.52
1940 3536 2.555199 CCTTATGAGCACCTCCGAAAG 58.445 52.381 0.00 0.00 0.00 2.62
1941 3537 1.209504 CCCTTATGAGCACCTCCGAAA 59.790 52.381 0.00 0.00 0.00 3.46
1942 3538 0.830648 CCCTTATGAGCACCTCCGAA 59.169 55.000 0.00 0.00 0.00 4.30
1943 3539 0.325296 ACCCTTATGAGCACCTCCGA 60.325 55.000 0.00 0.00 0.00 4.55
1944 3540 1.341531 CTACCCTTATGAGCACCTCCG 59.658 57.143 0.00 0.00 0.00 4.63
1945 3541 1.694696 CCTACCCTTATGAGCACCTCC 59.305 57.143 0.00 0.00 0.00 4.30
1946 3542 1.694696 CCCTACCCTTATGAGCACCTC 59.305 57.143 0.00 0.00 0.00 3.85
1947 3543 1.009675 ACCCTACCCTTATGAGCACCT 59.990 52.381 0.00 0.00 0.00 4.00
1948 3544 1.141053 CACCCTACCCTTATGAGCACC 59.859 57.143 0.00 0.00 0.00 5.01
1949 3545 1.838077 ACACCCTACCCTTATGAGCAC 59.162 52.381 0.00 0.00 0.00 4.40
1950 3546 1.837439 CACACCCTACCCTTATGAGCA 59.163 52.381 0.00 0.00 0.00 4.26
1951 3547 1.475213 GCACACCCTACCCTTATGAGC 60.475 57.143 0.00 0.00 0.00 4.26
1952 3548 1.202533 CGCACACCCTACCCTTATGAG 60.203 57.143 0.00 0.00 0.00 2.90
1953 3549 0.828022 CGCACACCCTACCCTTATGA 59.172 55.000 0.00 0.00 0.00 2.15
1954 3550 0.539986 ACGCACACCCTACCCTTATG 59.460 55.000 0.00 0.00 0.00 1.90
1955 3551 0.539986 CACGCACACCCTACCCTTAT 59.460 55.000 0.00 0.00 0.00 1.73
1956 3552 0.832983 ACACGCACACCCTACCCTTA 60.833 55.000 0.00 0.00 0.00 2.69
1957 3553 2.144738 ACACGCACACCCTACCCTT 61.145 57.895 0.00 0.00 0.00 3.95
1958 3554 2.525877 ACACGCACACCCTACCCT 60.526 61.111 0.00 0.00 0.00 4.34
1959 3555 1.818959 TACACACGCACACCCTACCC 61.819 60.000 0.00 0.00 0.00 3.69
1960 3556 0.668401 GTACACACGCACACCCTACC 60.668 60.000 0.00 0.00 0.00 3.18
1961 3557 1.005294 CGTACACACGCACACCCTAC 61.005 60.000 0.00 0.00 42.05 3.18
1962 3558 1.286570 CGTACACACGCACACCCTA 59.713 57.895 0.00 0.00 42.05 3.53
1963 3559 2.028484 CGTACACACGCACACCCT 59.972 61.111 0.00 0.00 42.05 4.34
1972 3568 2.231964 TCACCCCTATGAACGTACACAC 59.768 50.000 0.00 0.00 0.00 3.82
1973 3569 2.494471 CTCACCCCTATGAACGTACACA 59.506 50.000 0.00 0.00 0.00 3.72
1974 3570 2.494870 ACTCACCCCTATGAACGTACAC 59.505 50.000 0.00 0.00 0.00 2.90
1975 3571 2.494471 CACTCACCCCTATGAACGTACA 59.506 50.000 0.00 0.00 0.00 2.90
1976 3572 2.494870 ACACTCACCCCTATGAACGTAC 59.505 50.000 0.00 0.00 0.00 3.67
1977 3573 2.811410 ACACTCACCCCTATGAACGTA 58.189 47.619 0.00 0.00 0.00 3.57
1978 3574 1.640917 ACACTCACCCCTATGAACGT 58.359 50.000 0.00 0.00 0.00 3.99
1979 3575 3.717707 CATACACTCACCCCTATGAACG 58.282 50.000 0.00 0.00 0.00 3.95
1980 3576 3.467803 GCATACACTCACCCCTATGAAC 58.532 50.000 0.00 0.00 0.00 3.18
1981 3577 2.102420 CGCATACACTCACCCCTATGAA 59.898 50.000 0.00 0.00 0.00 2.57
1982 3578 1.686587 CGCATACACTCACCCCTATGA 59.313 52.381 0.00 0.00 0.00 2.15
1983 3579 1.873903 GCGCATACACTCACCCCTATG 60.874 57.143 0.30 0.00 0.00 2.23
1984 3580 0.393077 GCGCATACACTCACCCCTAT 59.607 55.000 0.30 0.00 0.00 2.57
1985 3581 1.820581 GCGCATACACTCACCCCTA 59.179 57.895 0.30 0.00 0.00 3.53
1986 3582 2.584608 GCGCATACACTCACCCCT 59.415 61.111 0.30 0.00 0.00 4.79
1987 3583 2.287457 TACGCGCATACACTCACCCC 62.287 60.000 5.73 0.00 0.00 4.95
1988 3584 0.249322 ATACGCGCATACACTCACCC 60.249 55.000 5.73 0.00 0.00 4.61
1989 3585 2.049228 GTATACGCGCATACACTCACC 58.951 52.381 21.74 0.00 32.61 4.02
1990 3586 1.707117 CGTATACGCGCATACACTCAC 59.293 52.381 24.96 4.22 31.96 3.51
1991 3587 1.598601 TCGTATACGCGCATACACTCA 59.401 47.619 24.96 6.77 39.60 3.41
1992 3588 2.231693 CTCGTATACGCGCATACACTC 58.768 52.381 24.96 2.96 39.60 3.51
1993 3589 2.311450 CTCGTATACGCGCATACACT 57.689 50.000 24.96 0.00 39.60 3.55
2003 3599 0.838229 GACACAAGCGCTCGTATACG 59.162 55.000 19.23 19.23 41.45 3.06
2004 3600 1.846782 CAGACACAAGCGCTCGTATAC 59.153 52.381 12.06 0.00 0.00 1.47
2005 3601 1.471287 ACAGACACAAGCGCTCGTATA 59.529 47.619 12.06 0.00 0.00 1.47
2006 3602 0.243907 ACAGACACAAGCGCTCGTAT 59.756 50.000 12.06 0.00 0.00 3.06
2007 3603 0.876399 TACAGACACAAGCGCTCGTA 59.124 50.000 12.06 2.49 0.00 3.43
2008 3604 0.663568 GTACAGACACAAGCGCTCGT 60.664 55.000 12.06 0.82 0.00 4.18
2009 3605 0.387367 AGTACAGACACAAGCGCTCG 60.387 55.000 12.06 0.00 0.00 5.03
2010 3606 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
2011 3607 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
2012 3608 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
2013 3609 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
2014 3610 2.670414 GAGCATCAGTACAGACACAAGC 59.330 50.000 0.00 0.00 33.17 4.01
2015 3611 3.917988 TGAGCATCAGTACAGACACAAG 58.082 45.455 0.00 0.00 42.56 3.16
2205 3859 8.895141 AGGGCTTGGTTATACTAATTCTTTTT 57.105 30.769 0.00 0.00 0.00 1.94
2311 3965 1.756538 CCACTTGCTTTGGAGTTTGGT 59.243 47.619 0.00 0.00 36.02 3.67
2322 3976 3.218470 TTGCAGCGCCACTTGCTT 61.218 55.556 18.56 0.00 41.72 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.