Multiple sequence alignment - TraesCS2A01G396700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G396700 chr2A 100.000 5671 0 0 1 5671 650611030 650616700 0.000000e+00 10473.0
1 TraesCS2A01G396700 chr2A 97.749 2932 27 7 2755 5671 575679611 575676704 0.000000e+00 5012.0
2 TraesCS2A01G396700 chr2A 98.463 1106 14 1 491 1596 575684357 575683255 0.000000e+00 1945.0
3 TraesCS2A01G396700 chr2A 98.783 822 5 2 1582 2399 575680394 575679574 0.000000e+00 1458.0
4 TraesCS2A01G396700 chr2A 94.422 251 11 3 5424 5671 34664143 34663893 3.210000e-102 383.0
5 TraesCS2A01G396700 chr2A 100.000 38 0 0 2755 2792 650613391 650613428 2.830000e-08 71.3
6 TraesCS2A01G396700 chr2A 100.000 38 0 0 2362 2399 650613784 650613821 2.830000e-08 71.3
7 TraesCS2A01G396700 chr7A 98.847 2429 21 6 3248 5671 671522217 671519791 0.000000e+00 4324.0
8 TraesCS2A01G396700 chr7A 96.720 1006 12 1 476 1481 671523790 671522806 0.000000e+00 1655.0
9 TraesCS2A01G396700 chr7A 98.328 299 5 0 1337 1635 671522839 671522541 5.030000e-145 525.0
10 TraesCS2A01G396700 chr5D 97.940 1359 24 1 1045 2399 445095393 445094035 0.000000e+00 2351.0
11 TraesCS2A01G396700 chr5D 97.576 1320 26 3 3963 5282 2607511 2606198 0.000000e+00 2255.0
12 TraesCS2A01G396700 chr5D 96.761 741 16 6 3020 3758 445093827 445093093 0.000000e+00 1229.0
13 TraesCS2A01G396700 chr5D 82.213 922 113 31 1478 2353 440774828 440773912 0.000000e+00 747.0
14 TraesCS2A01G396700 chr5D 93.227 251 14 3 5424 5671 409298634 409298384 3.230000e-97 366.0
15 TraesCS2A01G396700 chr5D 91.120 259 5 4 2755 2996 445094072 445093815 9.100000e-88 335.0
16 TraesCS2A01G396700 chr5D 98.013 151 2 1 3770 3919 445093108 445092958 1.570000e-65 261.0
17 TraesCS2A01G396700 chr5D 82.667 225 32 6 3300 3522 44502733 44502952 5.800000e-45 193.0
18 TraesCS2A01G396700 chr6D 97.871 1362 24 2 1042 2399 104064081 104065441 0.000000e+00 2350.0
19 TraesCS2A01G396700 chr6D 95.547 741 16 5 3020 3758 104065649 104066374 0.000000e+00 1170.0
20 TraesCS2A01G396700 chr6D 90.722 582 35 7 332 898 104063509 104064086 0.000000e+00 758.0
21 TraesCS2A01G396700 chr6D 90.873 252 7 2 2755 2991 104065404 104065654 1.970000e-84 324.0
22 TraesCS2A01G396700 chr6D 98.013 151 2 1 3770 3919 104066359 104066509 1.570000e-65 261.0
23 TraesCS2A01G396700 chr6D 100.000 34 0 0 1448 1481 104064376 104064409 4.740000e-06 63.9
24 TraesCS2A01G396700 chr6D 100.000 34 0 0 1337 1370 104064487 104064520 4.740000e-06 63.9
25 TraesCS2A01G396700 chr7D 97.797 1362 26 1 1042 2399 202028372 202029733 0.000000e+00 2346.0
26 TraesCS2A01G396700 chr7D 97.727 1320 24 3 3963 5282 511628592 511627279 0.000000e+00 2266.0
27 TraesCS2A01G396700 chr7D 94.667 900 24 5 3020 3919 202029941 202030816 0.000000e+00 1375.0
28 TraesCS2A01G396700 chr7D 91.667 252 5 2 2755 2991 202029696 202029946 9.100000e-88 335.0
29 TraesCS2A01G396700 chr7D 100.000 34 0 0 1448 1481 202028667 202028700 4.740000e-06 63.9
30 TraesCS2A01G396700 chr7D 100.000 34 0 0 1337 1370 202028778 202028811 4.740000e-06 63.9
31 TraesCS2A01G396700 chr3B 97.555 1227 19 3 1182 2399 61992690 61991466 0.000000e+00 2089.0
32 TraesCS2A01G396700 chr3B 94.312 1178 44 8 2755 3919 61991503 61990336 0.000000e+00 1783.0
33 TraesCS2A01G396700 chr3B 94.839 465 23 1 454 918 793281407 793280944 0.000000e+00 725.0
34 TraesCS2A01G396700 chr3B 93.933 445 25 2 476 920 402456942 402457384 0.000000e+00 671.0
35 TraesCS2A01G396700 chr3B 97.753 178 3 1 4853 5029 51868243 51868420 7.140000e-79 305.0
36 TraesCS2A01G396700 chr1D 96.767 866 19 6 4418 5282 375790678 375791535 0.000000e+00 1435.0
37 TraesCS2A01G396700 chr1D 93.095 782 28 9 4329 5103 416236955 416236193 0.000000e+00 1122.0
38 TraesCS2A01G396700 chr1D 83.623 922 100 19 1478 2353 355680780 355681696 0.000000e+00 819.0
39 TraesCS2A01G396700 chr1D 97.500 480 9 3 3941 4420 375782424 375782900 0.000000e+00 817.0
40 TraesCS2A01G396700 chr1D 83.959 586 74 14 3013 3586 67943075 67942498 1.390000e-150 544.0
41 TraesCS2A01G396700 chr1D 86.866 335 27 15 332 663 308184637 308184957 5.400000e-95 359.0
42 TraesCS2A01G396700 chr1D 95.261 211 10 0 3999 4209 416237162 416236952 9.100000e-88 335.0
43 TraesCS2A01G396700 chr6B 97.905 525 10 1 3941 4464 225650066 225650590 0.000000e+00 907.0
44 TraesCS2A01G396700 chr6B 99.719 356 1 0 2402 2757 410235846 410235491 0.000000e+00 652.0
45 TraesCS2A01G396700 chr6B 90.774 336 22 3 929 1255 658609371 658609036 1.880000e-119 440.0
46 TraesCS2A01G396700 chr2B 91.511 589 45 4 332 920 528465942 528466525 0.000000e+00 806.0
47 TraesCS2A01G396700 chr2B 99.721 358 1 0 2402 2759 636549879 636550236 0.000000e+00 656.0
48 TraesCS2A01G396700 chr2B 94.488 254 10 4 5422 5671 790372019 790371766 6.890000e-104 388.0
49 TraesCS2A01G396700 chr2B 91.732 254 17 4 5422 5671 741874226 741873973 3.250000e-92 350.0
50 TraesCS2A01G396700 chr2B 90.945 254 19 4 5422 5671 741867287 741867034 7.040000e-89 339.0
51 TraesCS2A01G396700 chr2B 90.945 254 19 4 5422 5671 741870747 741870494 7.040000e-89 339.0
52 TraesCS2A01G396700 chr2B 88.987 227 21 3 3282 3505 110583207 110583432 1.560000e-70 278.0
53 TraesCS2A01G396700 chr2B 88.591 149 16 1 3772 3919 76051554 76051406 4.510000e-41 180.0
54 TraesCS2A01G396700 chr2B 88.489 139 13 3 135 272 147317448 147317312 1.260000e-36 165.0
55 TraesCS2A01G396700 chr2B 90.278 72 5 2 4 75 147317931 147317862 6.050000e-15 93.5
56 TraesCS2A01G396700 chr7B 83.009 924 103 20 1478 2353 388877720 388878637 0.000000e+00 787.0
57 TraesCS2A01G396700 chr3D 82.430 922 110 32 1478 2353 461438436 461439351 0.000000e+00 758.0
58 TraesCS2A01G396700 chr3D 91.039 279 16 8 332 608 173633111 173632840 8.980000e-98 368.0
59 TraesCS2A01G396700 chr3D 94.969 159 8 0 396 554 265482178 265482020 3.390000e-62 250.0
60 TraesCS2A01G396700 chr4A 95.270 444 20 1 477 920 615512348 615512790 0.000000e+00 702.0
61 TraesCS2A01G396700 chr4A 91.096 146 8 5 3612 3755 359180318 359180460 5.800000e-45 193.0
62 TraesCS2A01G396700 chr4A 88.591 149 16 1 3772 3919 111288086 111287938 4.510000e-41 180.0
63 TraesCS2A01G396700 chr6A 95.581 430 11 3 4853 5282 585067361 585067782 0.000000e+00 682.0
64 TraesCS2A01G396700 chr6A 99.718 355 1 0 2402 2756 208511508 208511862 0.000000e+00 651.0
65 TraesCS2A01G396700 chr6A 86.441 118 13 2 3469 3586 521751645 521751531 5.960000e-25 126.0
66 TraesCS2A01G396700 chr4B 99.718 355 1 0 2402 2756 306604676 306604322 0.000000e+00 651.0
67 TraesCS2A01G396700 chr4B 99.718 355 1 0 2402 2756 609476053 609476407 0.000000e+00 651.0
68 TraesCS2A01G396700 chr4B 94.488 254 10 4 5422 5671 651792482 651792229 6.890000e-104 388.0
69 TraesCS2A01G396700 chr4B 94.937 79 4 0 516 594 527330025 527329947 2.150000e-24 124.0
70 TraesCS2A01G396700 chr2D 99.718 355 1 0 2402 2756 159328271 159328625 0.000000e+00 651.0
71 TraesCS2A01G396700 chr2D 94.379 427 18 5 364 788 547209926 547210348 0.000000e+00 651.0
72 TraesCS2A01G396700 chr2D 84.496 645 76 11 1729 2353 14796701 14797341 2.900000e-172 616.0
73 TraesCS2A01G396700 chr2D 89.170 277 27 3 332 608 136347936 136348209 5.440000e-90 342.0
74 TraesCS2A01G396700 chr1B 99.718 355 1 0 2402 2756 255253427 255253073 0.000000e+00 651.0
75 TraesCS2A01G396700 chr1B 90.093 323 23 3 942 1255 540843750 540844072 1.470000e-110 411.0
76 TraesCS2A01G396700 chr1B 87.879 231 25 2 3906 4133 631135476 631135706 9.370000e-68 268.0
77 TraesCS2A01G396700 chr1B 87.615 218 19 2 4197 4410 631136274 631136487 4.390000e-61 246.0
78 TraesCS2A01G396700 chr1B 85.938 192 22 2 4197 4388 206622367 206622553 3.470000e-47 200.0
79 TraesCS2A01G396700 chr1B 84.967 153 14 6 3713 3864 24698529 24698385 4.580000e-31 147.0
80 TraesCS2A01G396700 chr1A 99.718 355 1 0 2402 2756 45799853 45800207 0.000000e+00 651.0
81 TraesCS2A01G396700 chr1A 99.718 355 1 0 2402 2756 487491744 487492098 0.000000e+00 651.0
82 TraesCS2A01G396700 chrUn 92.731 454 21 4 332 784 92586305 92585863 0.000000e+00 645.0
83 TraesCS2A01G396700 chrUn 97.191 178 4 1 4853 5029 117286059 117286236 3.320000e-77 300.0
84 TraesCS2A01G396700 chr5A 91.018 334 24 2 928 1255 548387162 548387495 4.030000e-121 446.0
85 TraesCS2A01G396700 chr5A 88.690 336 29 6 929 1255 365705022 365704687 8.850000e-108 401.0
86 TraesCS2A01G396700 chr4D 96.313 217 6 2 3020 3235 129516676 129516891 6.990000e-94 355.0
87 TraesCS2A01G396700 chr4D 91.270 252 6 2 2755 2991 129516431 129516681 4.240000e-86 329.0
88 TraesCS2A01G396700 chr5B 90.476 147 12 2 127 272 557072004 557071859 5.800000e-45 193.0
89 TraesCS2A01G396700 chr5B 86.705 173 22 1 3747 3919 525272063 525271892 2.090000e-44 191.0
90 TraesCS2A01G396700 chr5B 84.314 153 15 6 3713 3864 641173686 641173830 2.130000e-29 141.0
91 TraesCS2A01G396700 chr5B 93.056 72 4 1 4 75 557099788 557099718 2.790000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G396700 chr2A 650611030 650616700 5670 False 3538.533333 10473 100.000000 1 5671 3 chr2A.!!$F1 5670
1 TraesCS2A01G396700 chr2A 575676704 575684357 7653 True 2805.000000 5012 98.331667 491 5671 3 chr2A.!!$R2 5180
2 TraesCS2A01G396700 chr7A 671519791 671523790 3999 True 2168.000000 4324 97.965000 476 5671 3 chr7A.!!$R1 5195
3 TraesCS2A01G396700 chr5D 2606198 2607511 1313 True 2255.000000 2255 97.576000 3963 5282 1 chr5D.!!$R1 1319
4 TraesCS2A01G396700 chr5D 445092958 445095393 2435 True 1044.000000 2351 95.958500 1045 3919 4 chr5D.!!$R4 2874
5 TraesCS2A01G396700 chr5D 440773912 440774828 916 True 747.000000 747 82.213000 1478 2353 1 chr5D.!!$R3 875
6 TraesCS2A01G396700 chr6D 104063509 104066509 3000 False 712.971429 2350 96.146571 332 3919 7 chr6D.!!$F1 3587
7 TraesCS2A01G396700 chr7D 511627279 511628592 1313 True 2266.000000 2266 97.727000 3963 5282 1 chr7D.!!$R1 1319
8 TraesCS2A01G396700 chr7D 202028372 202030816 2444 False 836.760000 2346 96.826200 1042 3919 5 chr7D.!!$F1 2877
9 TraesCS2A01G396700 chr3B 61990336 61992690 2354 True 1936.000000 2089 95.933500 1182 3919 2 chr3B.!!$R2 2737
10 TraesCS2A01G396700 chr1D 375790678 375791535 857 False 1435.000000 1435 96.767000 4418 5282 1 chr1D.!!$F4 864
11 TraesCS2A01G396700 chr1D 355680780 355681696 916 False 819.000000 819 83.623000 1478 2353 1 chr1D.!!$F2 875
12 TraesCS2A01G396700 chr1D 416236193 416237162 969 True 728.500000 1122 94.178000 3999 5103 2 chr1D.!!$R2 1104
13 TraesCS2A01G396700 chr1D 67942498 67943075 577 True 544.000000 544 83.959000 3013 3586 1 chr1D.!!$R1 573
14 TraesCS2A01G396700 chr6B 225650066 225650590 524 False 907.000000 907 97.905000 3941 4464 1 chr6B.!!$F1 523
15 TraesCS2A01G396700 chr2B 528465942 528466525 583 False 806.000000 806 91.511000 332 920 1 chr2B.!!$F2 588
16 TraesCS2A01G396700 chr2B 741867034 741874226 7192 True 342.666667 350 91.207333 5422 5671 3 chr2B.!!$R4 249
17 TraesCS2A01G396700 chr7B 388877720 388878637 917 False 787.000000 787 83.009000 1478 2353 1 chr7B.!!$F1 875
18 TraesCS2A01G396700 chr3D 461438436 461439351 915 False 758.000000 758 82.430000 1478 2353 1 chr3D.!!$F1 875
19 TraesCS2A01G396700 chr2D 14796701 14797341 640 False 616.000000 616 84.496000 1729 2353 1 chr2D.!!$F1 624
20 TraesCS2A01G396700 chr1B 631135476 631136487 1011 False 257.000000 268 87.747000 3906 4410 2 chr1B.!!$F3 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
203 204 0.035820 CGGAATTTCGGGTGGGAGAA 60.036 55.0 0.00 0.0 0.00 2.87 F
221 222 0.098728 AAAAATTCGCGGCAGGATCG 59.901 50.0 6.13 0.0 0.00 3.69 F
244 245 0.259065 TAGATGAGAGTGCGGGAGGT 59.741 55.0 0.00 0.0 0.00 3.85 F
258 259 0.536460 GGAGGTGCGGTTTCAAAGGA 60.536 55.0 0.00 0.0 0.00 3.36 F
577 605 0.911525 CCTCCTTCTTCCCTGGAGCA 60.912 60.0 0.00 0.0 44.32 4.26 F
2406 5531 0.107654 GCACTCGGTTCCAAGCCTAT 60.108 55.0 0.00 0.0 0.00 2.57 F
2467 5592 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.0 0.00 0.0 0.00 4.52 F
2696 5821 0.036294 GGGAAGTCCTCGTGAAAGGG 60.036 60.0 0.00 0.0 37.02 3.95 F
2697 5822 0.685660 GGAAGTCCTCGTGAAAGGGT 59.314 55.0 0.00 0.0 37.02 4.34 F
3768 6941 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.0 0.00 0.0 0.00 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1225 1274 0.035439 GCAAATCAGGAGGGTTCGGA 60.035 55.000 0.0 0.0 0.0 4.55 R
1572 1737 3.621794 CTTTTTCTTCCGTCTGCAACAG 58.378 45.455 0.0 0.0 0.0 3.16 R
1597 4638 4.824479 TGATGCAGACAGGAACTTCATA 57.176 40.909 0.0 0.0 34.6 2.15 R
1671 4751 5.012768 ACATAACCCTTGTAGATAATCCCCG 59.987 44.000 0.0 0.0 0.0 5.73 R
2448 5573 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.0 0.0 0.0 4.34 R
3744 6917 0.871722 ACACACACACACACACACAC 59.128 50.000 0.0 0.0 0.0 3.82 R
3767 6940 1.001406 TCTGACACACACACACACACA 59.999 47.619 0.0 0.0 0.0 3.72 R
3768 6941 1.720805 TCTGACACACACACACACAC 58.279 50.000 0.0 0.0 0.0 3.82 R
4227 7971 3.420893 AGAGAGAACAGAGAGGACAGTG 58.579 50.000 0.0 0.0 0.0 3.66 R
5466 9248 0.395173 AAGGTGAAGGCCGTGTTGTT 60.395 50.000 0.0 0.0 0.0 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.661563 AAATATAGAATAGACGGTTGTTGTGAA 57.338 29.630 0.00 0.00 0.00 3.18
28 29 9.661563 AATATAGAATAGACGGTTGTTGTGAAA 57.338 29.630 0.00 0.00 0.00 2.69
29 30 7.972832 ATAGAATAGACGGTTGTTGTGAAAA 57.027 32.000 0.00 0.00 0.00 2.29
30 31 6.877611 AGAATAGACGGTTGTTGTGAAAAT 57.122 33.333 0.00 0.00 0.00 1.82
31 32 6.668323 AGAATAGACGGTTGTTGTGAAAATG 58.332 36.000 0.00 0.00 0.00 2.32
32 33 6.262273 AGAATAGACGGTTGTTGTGAAAATGT 59.738 34.615 0.00 0.00 0.00 2.71
34 35 5.164606 AGACGGTTGTTGTGAAAATGTAC 57.835 39.130 0.00 0.00 0.00 2.90
35 36 4.879545 AGACGGTTGTTGTGAAAATGTACT 59.120 37.500 0.00 0.00 0.00 2.73
37 38 6.539464 AGACGGTTGTTGTGAAAATGTACTAA 59.461 34.615 0.00 0.00 0.00 2.24
38 39 7.227910 AGACGGTTGTTGTGAAAATGTACTAAT 59.772 33.333 0.00 0.00 0.00 1.73
39 40 7.357303 ACGGTTGTTGTGAAAATGTACTAATC 58.643 34.615 0.00 0.00 0.00 1.75
41 42 6.799925 GGTTGTTGTGAAAATGTACTAATCCG 59.200 38.462 0.00 0.00 0.00 4.18
42 43 7.308109 GGTTGTTGTGAAAATGTACTAATCCGA 60.308 37.037 0.00 0.00 0.00 4.55
45 46 5.712004 TGTGAAAATGTACTAATCCGACGA 58.288 37.500 0.00 0.00 0.00 4.20
47 48 6.089820 TGTGAAAATGTACTAATCCGACGAAC 59.910 38.462 0.00 0.00 0.00 3.95
49 50 6.645827 TGAAAATGTACTAATCCGACGAACAA 59.354 34.615 0.00 0.00 0.00 2.83
50 51 6.642683 AAATGTACTAATCCGACGAACAAG 57.357 37.500 0.00 0.00 0.00 3.16
51 52 4.100707 TGTACTAATCCGACGAACAAGG 57.899 45.455 0.00 0.00 0.00 3.61
52 53 3.758023 TGTACTAATCCGACGAACAAGGA 59.242 43.478 0.00 0.00 38.56 3.36
53 54 4.400251 TGTACTAATCCGACGAACAAGGAT 59.600 41.667 0.00 0.00 45.88 3.24
54 55 4.043037 ACTAATCCGACGAACAAGGATC 57.957 45.455 0.00 0.00 43.39 3.36
55 56 3.446161 ACTAATCCGACGAACAAGGATCA 59.554 43.478 0.00 0.00 43.39 2.92
57 58 2.823924 TCCGACGAACAAGGATCAAA 57.176 45.000 0.00 0.00 0.00 2.69
73 74 5.701224 GGATCAAATCCCATAAAGTACCCA 58.299 41.667 0.00 0.00 43.88 4.51
74 75 6.314917 GGATCAAATCCCATAAAGTACCCAT 58.685 40.000 0.00 0.00 43.88 4.00
75 76 6.209391 GGATCAAATCCCATAAAGTACCCATG 59.791 42.308 0.00 0.00 43.88 3.66
76 77 4.892934 TCAAATCCCATAAAGTACCCATGC 59.107 41.667 0.00 0.00 0.00 4.06
77 78 4.534647 AATCCCATAAAGTACCCATGCA 57.465 40.909 0.00 0.00 0.00 3.96
79 80 2.849943 TCCCATAAAGTACCCATGCAGT 59.150 45.455 0.00 0.00 0.00 4.40
80 81 2.951642 CCCATAAAGTACCCATGCAGTG 59.048 50.000 0.00 0.00 0.00 3.66
88 89 4.728409 CCATGCAGTGGCTCAAGA 57.272 55.556 0.00 0.00 42.12 3.02
91 92 1.001641 ATGCAGTGGCTCAAGACCC 60.002 57.895 0.00 0.00 41.91 4.46
93 94 1.001641 GCAGTGGCTCAAGACCCAT 60.002 57.895 0.00 0.00 36.96 4.00
96 97 1.001641 GTGGCTCAAGACCCATGCT 60.002 57.895 0.00 0.00 32.95 3.79
97 98 0.610232 GTGGCTCAAGACCCATGCTT 60.610 55.000 0.00 0.00 32.95 3.91
98 99 0.112995 TGGCTCAAGACCCATGCTTT 59.887 50.000 0.00 0.00 0.00 3.51
99 100 1.354031 TGGCTCAAGACCCATGCTTTA 59.646 47.619 0.00 0.00 0.00 1.85
100 101 2.224992 TGGCTCAAGACCCATGCTTTAA 60.225 45.455 0.00 0.00 0.00 1.52
101 102 3.026694 GGCTCAAGACCCATGCTTTAAT 58.973 45.455 0.00 0.00 0.00 1.40
102 103 3.067320 GGCTCAAGACCCATGCTTTAATC 59.933 47.826 0.00 0.00 0.00 1.75
103 104 3.067320 GCTCAAGACCCATGCTTTAATCC 59.933 47.826 0.00 0.00 0.00 3.01
104 105 3.631250 TCAAGACCCATGCTTTAATCCC 58.369 45.455 0.00 0.00 0.00 3.85
107 108 2.775384 AGACCCATGCTTTAATCCCGTA 59.225 45.455 0.00 0.00 0.00 4.02
108 109 2.876550 GACCCATGCTTTAATCCCGTAC 59.123 50.000 0.00 0.00 0.00 3.67
109 110 2.240160 ACCCATGCTTTAATCCCGTACA 59.760 45.455 0.00 0.00 0.00 2.90
110 111 3.283751 CCCATGCTTTAATCCCGTACAA 58.716 45.455 0.00 0.00 0.00 2.41
111 112 3.697045 CCCATGCTTTAATCCCGTACAAA 59.303 43.478 0.00 0.00 0.00 2.83
113 114 5.099575 CCATGCTTTAATCCCGTACAAAAC 58.900 41.667 0.00 0.00 0.00 2.43
124 125 1.404477 GTACAAAACGTGTGGCATGC 58.596 50.000 9.90 9.90 41.89 4.06
125 126 1.025041 TACAAAACGTGTGGCATGCA 58.975 45.000 21.36 2.54 41.89 3.96
126 127 0.388659 ACAAAACGTGTGGCATGCAT 59.611 45.000 21.36 0.00 39.72 3.96
127 128 1.202510 ACAAAACGTGTGGCATGCATT 60.203 42.857 21.36 0.40 39.72 3.56
128 129 1.865970 CAAAACGTGTGGCATGCATTT 59.134 42.857 21.36 6.73 0.00 2.32
130 131 0.961019 AACGTGTGGCATGCATTTCT 59.039 45.000 21.36 0.00 0.00 2.52
131 132 0.961019 ACGTGTGGCATGCATTTCTT 59.039 45.000 21.36 0.00 0.00 2.52
132 133 1.340889 ACGTGTGGCATGCATTTCTTT 59.659 42.857 21.36 0.00 0.00 2.52
133 134 2.556189 ACGTGTGGCATGCATTTCTTTA 59.444 40.909 21.36 0.00 0.00 1.85
134 135 3.173599 CGTGTGGCATGCATTTCTTTAG 58.826 45.455 21.36 0.00 0.00 1.85
135 136 3.119884 CGTGTGGCATGCATTTCTTTAGA 60.120 43.478 21.36 0.00 0.00 2.10
136 137 4.615682 CGTGTGGCATGCATTTCTTTAGAA 60.616 41.667 21.36 0.00 0.00 2.10
137 138 4.622740 GTGTGGCATGCATTTCTTTAGAAC 59.377 41.667 21.36 0.00 33.13 3.01
138 139 4.280425 TGTGGCATGCATTTCTTTAGAACA 59.720 37.500 21.36 0.00 33.13 3.18
139 140 4.622740 GTGGCATGCATTTCTTTAGAACAC 59.377 41.667 21.36 9.42 33.13 3.32
140 141 4.280425 TGGCATGCATTTCTTTAGAACACA 59.720 37.500 21.36 0.00 33.13 3.72
141 142 5.047164 TGGCATGCATTTCTTTAGAACACAT 60.047 36.000 21.36 0.00 33.13 3.21
142 143 5.290158 GGCATGCATTTCTTTAGAACACATG 59.710 40.000 21.36 16.56 39.41 3.21
143 144 5.220340 GCATGCATTTCTTTAGAACACATGC 60.220 40.000 23.37 23.37 45.99 4.06
145 146 6.028146 TGCATTTCTTTAGAACACATGCAT 57.972 33.333 19.04 0.00 44.30 3.96
147 148 5.220340 GCATTTCTTTAGAACACATGCATGC 60.220 40.000 26.53 11.82 41.67 4.06
148 149 5.710513 TTTCTTTAGAACACATGCATGCT 57.289 34.783 26.53 16.91 33.13 3.79
149 150 5.710513 TTCTTTAGAACACATGCATGCTT 57.289 34.783 26.53 17.31 0.00 3.91
151 152 7.395190 TTCTTTAGAACACATGCATGCTTAT 57.605 32.000 26.53 16.58 0.00 1.73
153 154 8.504812 TCTTTAGAACACATGCATGCTTATTA 57.495 30.769 26.53 11.07 0.00 0.98
156 157 6.764308 AGAACACATGCATGCTTATTAGTT 57.236 33.333 26.53 17.43 0.00 2.24
157 158 6.558009 AGAACACATGCATGCTTATTAGTTG 58.442 36.000 26.53 15.44 0.00 3.16
158 159 5.252969 ACACATGCATGCTTATTAGTTGG 57.747 39.130 26.53 0.00 0.00 3.77
159 160 4.046462 CACATGCATGCTTATTAGTTGGC 58.954 43.478 26.53 0.00 0.00 4.52
162 163 5.240183 ACATGCATGCTTATTAGTTGGCTAG 59.760 40.000 26.53 0.00 0.00 3.42
164 165 3.817647 GCATGCTTATTAGTTGGCTAGCT 59.182 43.478 15.72 0.00 0.00 3.32
165 166 4.997395 GCATGCTTATTAGTTGGCTAGCTA 59.003 41.667 15.72 5.44 0.00 3.32
166 167 5.470098 GCATGCTTATTAGTTGGCTAGCTAA 59.530 40.000 15.72 12.74 34.69 3.09
168 169 7.625185 GCATGCTTATTAGTTGGCTAGCTAATC 60.625 40.741 19.81 10.46 39.84 1.75
169 170 6.231211 TGCTTATTAGTTGGCTAGCTAATCC 58.769 40.000 19.81 11.68 39.84 3.01
170 171 6.183361 TGCTTATTAGTTGGCTAGCTAATCCA 60.183 38.462 19.81 13.61 39.84 3.41
171 172 6.370166 GCTTATTAGTTGGCTAGCTAATCCAG 59.630 42.308 19.81 17.25 39.84 3.86
188 189 6.767524 AATCCAGCATTAATTGTTACGGAA 57.232 33.333 0.00 0.00 0.00 4.30
189 190 6.959639 ATCCAGCATTAATTGTTACGGAAT 57.040 33.333 0.00 0.00 0.00 3.01
190 191 6.767524 TCCAGCATTAATTGTTACGGAATT 57.232 33.333 0.00 0.00 0.00 2.17
191 192 7.164230 TCCAGCATTAATTGTTACGGAATTT 57.836 32.000 0.00 0.00 0.00 1.82
192 193 7.254852 TCCAGCATTAATTGTTACGGAATTTC 58.745 34.615 0.00 0.00 0.00 2.17
194 195 6.196353 CAGCATTAATTGTTACGGAATTTCGG 59.804 38.462 11.59 2.69 0.00 4.30
195 196 5.457473 GCATTAATTGTTACGGAATTTCGGG 59.543 40.000 11.59 0.00 0.00 5.14
196 197 6.557110 CATTAATTGTTACGGAATTTCGGGT 58.443 36.000 11.59 0.00 0.00 5.28
198 199 1.810959 TGTTACGGAATTTCGGGTGG 58.189 50.000 11.59 0.00 0.00 4.61
199 200 1.089112 GTTACGGAATTTCGGGTGGG 58.911 55.000 11.59 0.00 0.00 4.61
201 202 0.538118 TACGGAATTTCGGGTGGGAG 59.462 55.000 11.59 0.00 0.00 4.30
203 204 0.035820 CGGAATTTCGGGTGGGAGAA 60.036 55.000 0.00 0.00 0.00 2.87
204 205 1.612199 CGGAATTTCGGGTGGGAGAAA 60.612 52.381 0.00 0.00 40.14 2.52
205 206 2.521126 GGAATTTCGGGTGGGAGAAAA 58.479 47.619 0.00 0.00 39.42 2.29
207 208 3.513912 GGAATTTCGGGTGGGAGAAAAAT 59.486 43.478 0.00 0.00 39.42 1.82
208 209 4.020573 GGAATTTCGGGTGGGAGAAAAATT 60.021 41.667 0.00 0.00 39.42 1.82
209 210 4.801330 ATTTCGGGTGGGAGAAAAATTC 57.199 40.909 0.00 0.00 39.42 2.17
210 211 1.816074 TCGGGTGGGAGAAAAATTCG 58.184 50.000 0.00 0.00 34.02 3.34
211 212 0.170339 CGGGTGGGAGAAAAATTCGC 59.830 55.000 0.00 0.00 34.02 4.70
213 214 0.170339 GGTGGGAGAAAAATTCGCGG 59.830 55.000 6.13 0.00 34.02 6.46
214 215 0.456142 GTGGGAGAAAAATTCGCGGC 60.456 55.000 6.13 0.00 34.02 6.53
215 216 0.891449 TGGGAGAAAAATTCGCGGCA 60.891 50.000 6.13 0.00 34.02 5.69
217 218 0.179163 GGAGAAAAATTCGCGGCAGG 60.179 55.000 6.13 0.00 34.02 4.85
219 220 1.401905 GAGAAAAATTCGCGGCAGGAT 59.598 47.619 6.13 0.00 34.02 3.24
220 221 1.401905 AGAAAAATTCGCGGCAGGATC 59.598 47.619 6.13 0.00 34.02 3.36
221 222 0.098728 AAAAATTCGCGGCAGGATCG 59.901 50.000 6.13 0.00 0.00 3.69
222 223 1.714899 AAAATTCGCGGCAGGATCGG 61.715 55.000 6.13 0.00 0.00 4.18
223 224 2.587322 AAATTCGCGGCAGGATCGGA 62.587 55.000 6.13 0.00 0.00 4.55
224 225 2.978452 AATTCGCGGCAGGATCGGAG 62.978 60.000 6.13 0.00 0.00 4.63
226 227 3.592814 CGCGGCAGGATCGGAGTA 61.593 66.667 0.00 0.00 0.00 2.59
227 228 2.336809 GCGGCAGGATCGGAGTAG 59.663 66.667 0.00 0.00 0.00 2.57
229 230 1.528292 GCGGCAGGATCGGAGTAGAT 61.528 60.000 0.00 0.00 0.00 1.98
231 232 1.621992 GGCAGGATCGGAGTAGATGA 58.378 55.000 0.00 0.00 0.00 2.92
232 233 1.543802 GGCAGGATCGGAGTAGATGAG 59.456 57.143 0.00 0.00 0.00 2.90
233 234 2.509569 GCAGGATCGGAGTAGATGAGA 58.490 52.381 0.00 0.00 0.00 3.27
234 235 2.487762 GCAGGATCGGAGTAGATGAGAG 59.512 54.545 0.00 0.00 0.00 3.20
236 237 3.501828 CAGGATCGGAGTAGATGAGAGTG 59.498 52.174 0.00 0.00 0.00 3.51
237 238 2.227865 GGATCGGAGTAGATGAGAGTGC 59.772 54.545 0.00 0.00 0.00 4.40
239 240 0.309302 CGGAGTAGATGAGAGTGCGG 59.691 60.000 0.00 0.00 0.00 5.69
240 241 0.671251 GGAGTAGATGAGAGTGCGGG 59.329 60.000 0.00 0.00 0.00 6.13
242 243 1.606668 GAGTAGATGAGAGTGCGGGAG 59.393 57.143 0.00 0.00 0.00 4.30
243 244 0.671251 GTAGATGAGAGTGCGGGAGG 59.329 60.000 0.00 0.00 0.00 4.30
244 245 0.259065 TAGATGAGAGTGCGGGAGGT 59.741 55.000 0.00 0.00 0.00 3.85
247 248 4.803426 GAGAGTGCGGGAGGTGCG 62.803 72.222 0.00 0.00 34.24 5.34
255 256 1.894756 CGGGAGGTGCGGTTTCAAA 60.895 57.895 0.00 0.00 0.00 2.69
257 258 1.524008 GGGAGGTGCGGTTTCAAAGG 61.524 60.000 0.00 0.00 0.00 3.11
258 259 0.536460 GGAGGTGCGGTTTCAAAGGA 60.536 55.000 0.00 0.00 0.00 3.36
260 261 1.679153 GAGGTGCGGTTTCAAAGGAAA 59.321 47.619 0.00 0.00 40.60 3.13
268 269 3.898517 GTTTCAAAGGAAAGCGCTACT 57.101 42.857 12.05 6.89 43.35 2.57
269 270 4.224715 GTTTCAAAGGAAAGCGCTACTT 57.775 40.909 12.05 13.34 43.35 2.24
270 271 5.352643 GTTTCAAAGGAAAGCGCTACTTA 57.647 39.130 12.05 0.00 43.35 2.24
271 272 5.754778 GTTTCAAAGGAAAGCGCTACTTAA 58.245 37.500 12.05 5.51 43.35 1.85
272 273 6.379386 GTTTCAAAGGAAAGCGCTACTTAAT 58.621 36.000 12.05 0.00 43.35 1.40
273 274 5.796350 TCAAAGGAAAGCGCTACTTAATC 57.204 39.130 12.05 2.43 37.75 1.75
275 276 5.581085 TCAAAGGAAAGCGCTACTTAATCTC 59.419 40.000 12.05 0.00 37.75 2.75
276 277 5.346181 AAGGAAAGCGCTACTTAATCTCT 57.654 39.130 12.05 0.00 37.75 3.10
277 278 6.466885 AAGGAAAGCGCTACTTAATCTCTA 57.533 37.500 12.05 0.00 37.75 2.43
278 279 6.658188 AGGAAAGCGCTACTTAATCTCTAT 57.342 37.500 12.05 0.00 37.75 1.98
279 280 7.056844 AGGAAAGCGCTACTTAATCTCTATT 57.943 36.000 12.05 0.00 37.75 1.73
281 282 7.014808 AGGAAAGCGCTACTTAATCTCTATTCT 59.985 37.037 12.05 0.00 37.75 2.40
282 283 7.654116 GGAAAGCGCTACTTAATCTCTATTCTT 59.346 37.037 12.05 0.00 37.75 2.52
283 284 9.680315 GAAAGCGCTACTTAATCTCTATTCTTA 57.320 33.333 12.05 0.00 37.75 2.10
286 287 9.632807 AGCGCTACTTAATCTCTATTCTTAATG 57.367 33.333 8.99 0.00 0.00 1.90
287 288 9.413048 GCGCTACTTAATCTCTATTCTTAATGT 57.587 33.333 0.00 0.00 0.00 2.71
305 306 9.591792 TCTTAATGTCTCAATTGATAGTCAGTG 57.408 33.333 8.96 0.00 0.00 3.66
307 308 9.725019 TTAATGTCTCAATTGATAGTCAGTGTT 57.275 29.630 8.96 0.00 0.00 3.32
308 309 8.627208 AATGTCTCAATTGATAGTCAGTGTTT 57.373 30.769 8.96 0.00 0.00 2.83
309 310 7.658179 TGTCTCAATTGATAGTCAGTGTTTC 57.342 36.000 8.96 0.00 0.00 2.78
310 311 6.366061 TGTCTCAATTGATAGTCAGTGTTTCG 59.634 38.462 8.96 0.00 0.00 3.46
311 312 5.869344 TCTCAATTGATAGTCAGTGTTTCGG 59.131 40.000 8.96 0.00 0.00 4.30
312 313 4.935205 TCAATTGATAGTCAGTGTTTCGGG 59.065 41.667 3.38 0.00 0.00 5.14
314 315 4.345859 TTGATAGTCAGTGTTTCGGGTT 57.654 40.909 0.00 0.00 0.00 4.11
315 316 4.345859 TGATAGTCAGTGTTTCGGGTTT 57.654 40.909 0.00 0.00 0.00 3.27
317 318 5.856156 TGATAGTCAGTGTTTCGGGTTTTA 58.144 37.500 0.00 0.00 0.00 1.52
318 319 6.469410 TGATAGTCAGTGTTTCGGGTTTTAT 58.531 36.000 0.00 0.00 0.00 1.40
319 320 6.938030 TGATAGTCAGTGTTTCGGGTTTTATT 59.062 34.615 0.00 0.00 0.00 1.40
323 324 6.754675 AGTCAGTGTTTCGGGTTTTATTTTTG 59.245 34.615 0.00 0.00 0.00 2.44
325 326 7.701501 GTCAGTGTTTCGGGTTTTATTTTTGTA 59.298 33.333 0.00 0.00 0.00 2.41
356 357 1.515081 GTCCAACCATTTTCGTCCGA 58.485 50.000 0.00 0.00 0.00 4.55
402 403 2.031465 TTTCTCGCACCCCGAACC 59.969 61.111 0.00 0.00 46.81 3.62
577 605 0.911525 CCTCCTTCTTCCCTGGAGCA 60.912 60.000 0.00 0.00 44.32 4.26
1225 1274 4.202253 GCAAAGGGGTGAGTTTTCTTCATT 60.202 41.667 0.00 0.00 0.00 2.57
1267 1321 3.266510 ACTGCACTGTGAGAACTCAAA 57.733 42.857 12.86 0.25 41.85 2.69
1549 1714 5.912396 TCTTCACGTGTGTGCATTAAATTTC 59.088 36.000 16.51 0.00 46.01 2.17
1597 4638 2.622942 TGCAGACGGAAGAAAAAGCAAT 59.377 40.909 0.00 0.00 0.00 3.56
1671 4751 4.710375 TCTTCCTTCTATGGGACTGTACAC 59.290 45.833 0.00 0.00 31.94 2.90
1672 4752 3.021695 TCCTTCTATGGGACTGTACACG 58.978 50.000 0.00 0.00 0.00 4.49
2377 5502 7.548196 TGTCAATATATCGAAAGTTTGGTCC 57.452 36.000 0.00 0.00 0.00 4.46
2378 5503 7.335627 TGTCAATATATCGAAAGTTTGGTCCT 58.664 34.615 0.00 0.00 0.00 3.85
2379 5504 7.494625 TGTCAATATATCGAAAGTTTGGTCCTC 59.505 37.037 0.00 0.00 0.00 3.71
2380 5505 7.711339 GTCAATATATCGAAAGTTTGGTCCTCT 59.289 37.037 0.00 0.00 0.00 3.69
2381 5506 7.710907 TCAATATATCGAAAGTTTGGTCCTCTG 59.289 37.037 0.00 0.00 0.00 3.35
2382 5507 5.677319 ATATCGAAAGTTTGGTCCTCTGA 57.323 39.130 0.00 0.00 0.00 3.27
2383 5508 3.386768 TCGAAAGTTTGGTCCTCTGAG 57.613 47.619 0.00 0.00 0.00 3.35
2384 5509 2.698797 TCGAAAGTTTGGTCCTCTGAGT 59.301 45.455 3.66 0.00 0.00 3.41
2385 5510 3.893200 TCGAAAGTTTGGTCCTCTGAGTA 59.107 43.478 3.66 0.00 0.00 2.59
2386 5511 4.342951 TCGAAAGTTTGGTCCTCTGAGTAA 59.657 41.667 3.66 0.00 0.00 2.24
2387 5512 4.686554 CGAAAGTTTGGTCCTCTGAGTAAG 59.313 45.833 3.66 0.00 0.00 2.34
2388 5513 3.686916 AGTTTGGTCCTCTGAGTAAGC 57.313 47.619 3.66 2.11 0.00 3.09
2389 5514 2.972713 AGTTTGGTCCTCTGAGTAAGCA 59.027 45.455 3.66 4.69 0.00 3.91
2390 5515 3.067833 GTTTGGTCCTCTGAGTAAGCAC 58.932 50.000 3.66 0.00 0.00 4.40
2391 5516 2.310779 TGGTCCTCTGAGTAAGCACT 57.689 50.000 3.66 0.00 37.87 4.40
2400 5525 2.450609 GAGTAAGCACTCGGTTCCAA 57.549 50.000 0.00 0.00 41.79 3.53
2401 5526 2.338500 GAGTAAGCACTCGGTTCCAAG 58.662 52.381 0.00 0.00 41.79 3.61
2402 5527 0.796927 GTAAGCACTCGGTTCCAAGC 59.203 55.000 0.00 0.00 34.01 4.01
2403 5528 0.321298 TAAGCACTCGGTTCCAAGCC 60.321 55.000 0.00 0.00 34.01 4.35
2404 5529 2.032681 GCACTCGGTTCCAAGCCT 59.967 61.111 0.00 0.00 0.00 4.58
2405 5530 1.192146 AGCACTCGGTTCCAAGCCTA 61.192 55.000 0.00 0.00 0.00 3.93
2406 5531 0.107654 GCACTCGGTTCCAAGCCTAT 60.108 55.000 0.00 0.00 0.00 2.57
2407 5532 1.656652 CACTCGGTTCCAAGCCTATG 58.343 55.000 0.00 0.00 0.00 2.23
2408 5533 1.066143 CACTCGGTTCCAAGCCTATGT 60.066 52.381 0.00 0.00 0.00 2.29
2409 5534 1.207329 ACTCGGTTCCAAGCCTATGTC 59.793 52.381 0.00 0.00 0.00 3.06
2410 5535 1.482593 CTCGGTTCCAAGCCTATGTCT 59.517 52.381 0.00 0.00 0.00 3.41
2411 5536 1.906574 TCGGTTCCAAGCCTATGTCTT 59.093 47.619 0.00 0.00 0.00 3.01
2412 5537 2.093658 TCGGTTCCAAGCCTATGTCTTC 60.094 50.000 0.00 0.00 0.00 2.87
2413 5538 2.093447 CGGTTCCAAGCCTATGTCTTCT 60.093 50.000 0.00 0.00 0.00 2.85
2414 5539 3.132289 CGGTTCCAAGCCTATGTCTTCTA 59.868 47.826 0.00 0.00 0.00 2.10
2415 5540 4.698575 GGTTCCAAGCCTATGTCTTCTAG 58.301 47.826 0.00 0.00 0.00 2.43
2416 5541 4.443598 GGTTCCAAGCCTATGTCTTCTAGG 60.444 50.000 0.00 0.00 39.06 3.02
2432 5557 2.203209 GGCATAGCCGGTCCCAAG 60.203 66.667 1.90 0.00 39.62 3.61
2433 5558 2.902343 GCATAGCCGGTCCCAAGC 60.902 66.667 1.90 0.00 0.00 4.01
2434 5559 2.203209 CATAGCCGGTCCCAAGCC 60.203 66.667 1.90 0.00 0.00 4.35
2435 5560 3.489513 ATAGCCGGTCCCAAGCCC 61.490 66.667 1.90 0.00 0.00 5.19
2444 5569 2.044352 CCCAAGCCCGGGTAAAGG 60.044 66.667 24.63 18.41 41.83 3.11
2445 5570 2.608550 CCCAAGCCCGGGTAAAGGA 61.609 63.158 24.63 0.00 41.83 3.36
2446 5571 1.077716 CCAAGCCCGGGTAAAGGAG 60.078 63.158 24.63 5.31 0.00 3.69
2447 5572 1.077716 CAAGCCCGGGTAAAGGAGG 60.078 63.158 24.63 0.00 0.00 4.30
2448 5573 1.229723 AAGCCCGGGTAAAGGAGGA 60.230 57.895 24.63 0.00 0.00 3.71
2449 5574 1.272554 AAGCCCGGGTAAAGGAGGAG 61.273 60.000 24.63 0.00 0.00 3.69
2450 5575 2.743179 GCCCGGGTAAAGGAGGAGG 61.743 68.421 24.63 0.00 0.00 4.30
2451 5576 2.070650 CCCGGGTAAAGGAGGAGGG 61.071 68.421 14.18 0.00 0.00 4.30
2452 5577 1.306739 CCGGGTAAAGGAGGAGGGT 60.307 63.158 0.00 0.00 0.00 4.34
2453 5578 0.912968 CCGGGTAAAGGAGGAGGGTT 60.913 60.000 0.00 0.00 0.00 4.11
2454 5579 0.252197 CGGGTAAAGGAGGAGGGTTG 59.748 60.000 0.00 0.00 0.00 3.77
2455 5580 1.369403 GGGTAAAGGAGGAGGGTTGT 58.631 55.000 0.00 0.00 0.00 3.32
2456 5581 1.004394 GGGTAAAGGAGGAGGGTTGTG 59.996 57.143 0.00 0.00 0.00 3.33
2457 5582 1.982958 GGTAAAGGAGGAGGGTTGTGA 59.017 52.381 0.00 0.00 0.00 3.58
2458 5583 2.576648 GGTAAAGGAGGAGGGTTGTGAT 59.423 50.000 0.00 0.00 0.00 3.06
2459 5584 3.778629 GGTAAAGGAGGAGGGTTGTGATA 59.221 47.826 0.00 0.00 0.00 2.15
2460 5585 4.141688 GGTAAAGGAGGAGGGTTGTGATAG 60.142 50.000 0.00 0.00 0.00 2.08
2461 5586 2.182516 AGGAGGAGGGTTGTGATAGG 57.817 55.000 0.00 0.00 0.00 2.57
2462 5587 0.470341 GGAGGAGGGTTGTGATAGGC 59.530 60.000 0.00 0.00 0.00 3.93
2463 5588 1.501582 GAGGAGGGTTGTGATAGGCT 58.498 55.000 0.00 0.00 0.00 4.58
2464 5589 1.840635 GAGGAGGGTTGTGATAGGCTT 59.159 52.381 0.00 0.00 0.00 4.35
2465 5590 1.561542 AGGAGGGTTGTGATAGGCTTG 59.438 52.381 0.00 0.00 0.00 4.01
2466 5591 1.408822 GGAGGGTTGTGATAGGCTTGG 60.409 57.143 0.00 0.00 0.00 3.61
2467 5592 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.00 0.00 4.52
2468 5593 1.376609 GGGTTGTGATAGGCTTGGCG 61.377 60.000 0.00 0.00 0.00 5.69
2469 5594 0.392461 GGTTGTGATAGGCTTGGCGA 60.392 55.000 0.00 0.00 0.00 5.54
2470 5595 1.009829 GTTGTGATAGGCTTGGCGAG 58.990 55.000 0.00 0.00 0.00 5.03
2481 5606 4.458666 TGGCGAGCCAACGTAAAA 57.541 50.000 15.24 0.00 44.12 1.52
2482 5607 2.704108 TGGCGAGCCAACGTAAAAA 58.296 47.368 15.24 0.00 44.12 1.94
2483 5608 0.308376 TGGCGAGCCAACGTAAAAAC 59.692 50.000 15.24 0.00 44.12 2.43
2484 5609 0.589708 GGCGAGCCAACGTAAAAACT 59.410 50.000 9.58 0.00 35.81 2.66
2485 5610 1.799994 GGCGAGCCAACGTAAAAACTA 59.200 47.619 9.58 0.00 35.81 2.24
2486 5611 2.159747 GGCGAGCCAACGTAAAAACTAG 60.160 50.000 9.58 0.00 35.81 2.57
2487 5612 2.723923 GCGAGCCAACGTAAAAACTAGC 60.724 50.000 0.00 0.00 35.59 3.42
2488 5613 2.159747 CGAGCCAACGTAAAAACTAGCC 60.160 50.000 0.00 0.00 0.00 3.93
2489 5614 2.809696 GAGCCAACGTAAAAACTAGCCA 59.190 45.455 0.00 0.00 0.00 4.75
2490 5615 2.812011 AGCCAACGTAAAAACTAGCCAG 59.188 45.455 0.00 0.00 0.00 4.85
2491 5616 2.551032 GCCAACGTAAAAACTAGCCAGT 59.449 45.455 0.00 0.00 36.19 4.00
2492 5617 3.364664 GCCAACGTAAAAACTAGCCAGTC 60.365 47.826 0.00 0.00 32.29 3.51
2493 5618 3.187842 CCAACGTAAAAACTAGCCAGTCC 59.812 47.826 0.00 0.00 32.29 3.85
2494 5619 3.049708 ACGTAAAAACTAGCCAGTCCC 57.950 47.619 0.00 0.00 32.29 4.46
2495 5620 2.369532 ACGTAAAAACTAGCCAGTCCCA 59.630 45.455 0.00 0.00 32.29 4.37
2496 5621 3.008704 ACGTAAAAACTAGCCAGTCCCAT 59.991 43.478 0.00 0.00 32.29 4.00
2497 5622 4.223477 ACGTAAAAACTAGCCAGTCCCATA 59.777 41.667 0.00 0.00 32.29 2.74
2498 5623 4.809426 CGTAAAAACTAGCCAGTCCCATAG 59.191 45.833 0.00 0.00 32.29 2.23
2499 5624 3.933861 AAAACTAGCCAGTCCCATAGG 57.066 47.619 0.00 0.00 32.29 2.57
2500 5625 2.570386 AACTAGCCAGTCCCATAGGT 57.430 50.000 0.00 0.00 32.29 3.08
2501 5626 3.700863 AACTAGCCAGTCCCATAGGTA 57.299 47.619 0.00 0.00 32.29 3.08
2502 5627 3.925261 ACTAGCCAGTCCCATAGGTAT 57.075 47.619 0.00 0.00 0.00 2.73
2503 5628 3.511477 ACTAGCCAGTCCCATAGGTATG 58.489 50.000 0.00 0.00 0.00 2.39
2504 5629 2.795291 AGCCAGTCCCATAGGTATGA 57.205 50.000 0.00 0.00 35.75 2.15
2505 5630 3.060479 AGCCAGTCCCATAGGTATGAA 57.940 47.619 0.00 0.00 35.75 2.57
2506 5631 3.393687 AGCCAGTCCCATAGGTATGAAA 58.606 45.455 0.00 0.00 35.75 2.69
2507 5632 3.136626 AGCCAGTCCCATAGGTATGAAAC 59.863 47.826 0.00 0.00 35.75 2.78
2518 5643 3.420839 GGTATGAAACCCATTTGAGCG 57.579 47.619 0.00 0.00 43.16 5.03
2519 5644 3.013921 GGTATGAAACCCATTTGAGCGA 58.986 45.455 0.00 0.00 43.16 4.93
2520 5645 3.065371 GGTATGAAACCCATTTGAGCGAG 59.935 47.826 0.00 0.00 43.16 5.03
2521 5646 2.559698 TGAAACCCATTTGAGCGAGA 57.440 45.000 0.00 0.00 0.00 4.04
2522 5647 2.857483 TGAAACCCATTTGAGCGAGAA 58.143 42.857 0.00 0.00 0.00 2.87
2523 5648 3.420893 TGAAACCCATTTGAGCGAGAAT 58.579 40.909 0.00 0.00 0.00 2.40
2524 5649 4.584874 TGAAACCCATTTGAGCGAGAATA 58.415 39.130 0.00 0.00 0.00 1.75
2525 5650 4.635765 TGAAACCCATTTGAGCGAGAATAG 59.364 41.667 0.00 0.00 0.00 1.73
2526 5651 3.914426 ACCCATTTGAGCGAGAATAGT 57.086 42.857 0.00 0.00 0.00 2.12
2527 5652 5.353394 AACCCATTTGAGCGAGAATAGTA 57.647 39.130 0.00 0.00 0.00 1.82
2528 5653 4.694339 ACCCATTTGAGCGAGAATAGTAC 58.306 43.478 0.00 0.00 0.00 2.73
2529 5654 4.406003 ACCCATTTGAGCGAGAATAGTACT 59.594 41.667 0.00 0.00 0.00 2.73
2530 5655 5.597182 ACCCATTTGAGCGAGAATAGTACTA 59.403 40.000 4.77 4.77 0.00 1.82
2531 5656 6.153067 CCCATTTGAGCGAGAATAGTACTAG 58.847 44.000 8.85 0.00 0.00 2.57
2532 5657 6.153067 CCATTTGAGCGAGAATAGTACTAGG 58.847 44.000 8.85 0.00 0.00 3.02
2533 5658 6.016192 CCATTTGAGCGAGAATAGTACTAGGA 60.016 42.308 8.85 0.00 0.00 2.94
2534 5659 7.309499 CCATTTGAGCGAGAATAGTACTAGGAT 60.309 40.741 8.85 0.00 0.00 3.24
2535 5660 6.561737 TTGAGCGAGAATAGTACTAGGATG 57.438 41.667 8.85 0.00 0.00 3.51
2536 5661 5.004448 TGAGCGAGAATAGTACTAGGATGG 58.996 45.833 8.85 0.00 0.00 3.51
2537 5662 4.337145 AGCGAGAATAGTACTAGGATGGG 58.663 47.826 8.85 0.00 0.00 4.00
2538 5663 4.080687 GCGAGAATAGTACTAGGATGGGT 58.919 47.826 8.85 0.00 0.00 4.51
2539 5664 4.082679 GCGAGAATAGTACTAGGATGGGTG 60.083 50.000 8.85 0.00 0.00 4.61
2540 5665 5.314529 CGAGAATAGTACTAGGATGGGTGA 58.685 45.833 8.85 0.00 0.00 4.02
2541 5666 5.181622 CGAGAATAGTACTAGGATGGGTGAC 59.818 48.000 8.85 0.00 0.00 3.67
2555 5680 1.487300 GGTGACCTCCTAGGAAGTCC 58.513 60.000 29.70 22.12 37.67 3.85
2557 5682 2.380941 GTGACCTCCTAGGAAGTCCTC 58.619 57.143 29.70 21.09 44.77 3.71
2558 5683 1.064611 TGACCTCCTAGGAAGTCCTCG 60.065 57.143 29.70 10.80 44.77 4.63
2559 5684 1.001282 ACCTCCTAGGAAGTCCTCGT 58.999 55.000 13.77 0.00 44.77 4.18
2560 5685 1.341187 ACCTCCTAGGAAGTCCTCGTG 60.341 57.143 13.77 0.00 44.77 4.35
2561 5686 1.064611 CCTCCTAGGAAGTCCTCGTGA 60.065 57.143 13.77 0.00 44.77 4.35
2562 5687 2.620886 CCTCCTAGGAAGTCCTCGTGAA 60.621 54.545 13.77 0.00 44.77 3.18
2563 5688 3.090037 CTCCTAGGAAGTCCTCGTGAAA 58.910 50.000 13.77 0.00 44.77 2.69
2564 5689 3.090037 TCCTAGGAAGTCCTCGTGAAAG 58.910 50.000 9.71 0.00 44.77 2.62
2565 5690 2.166664 CCTAGGAAGTCCTCGTGAAAGG 59.833 54.545 1.05 0.05 44.77 3.11
2566 5691 0.977395 AGGAAGTCCTCGTGAAAGGG 59.023 55.000 0.00 0.00 44.77 3.95
2567 5692 0.685660 GGAAGTCCTCGTGAAAGGGT 59.314 55.000 0.00 0.00 37.02 4.34
2568 5693 1.071857 GGAAGTCCTCGTGAAAGGGTT 59.928 52.381 0.00 0.00 37.02 4.11
2569 5694 2.486727 GGAAGTCCTCGTGAAAGGGTTT 60.487 50.000 0.00 0.00 37.02 3.27
2570 5695 2.545537 AGTCCTCGTGAAAGGGTTTC 57.454 50.000 0.00 0.00 40.08 2.78
2571 5696 1.766496 AGTCCTCGTGAAAGGGTTTCA 59.234 47.619 0.00 0.00 46.68 2.69
2582 5707 6.652205 TGAAAGGGTTTCATATCTAAGGGT 57.348 37.500 0.00 0.00 44.21 4.34
2583 5708 7.039722 TGAAAGGGTTTCATATCTAAGGGTT 57.960 36.000 0.00 0.00 44.21 4.11
2584 5709 6.889722 TGAAAGGGTTTCATATCTAAGGGTTG 59.110 38.462 0.00 0.00 44.21 3.77
2585 5710 6.402981 AAGGGTTTCATATCTAAGGGTTGT 57.597 37.500 0.00 0.00 0.00 3.32
2586 5711 5.755849 AGGGTTTCATATCTAAGGGTTGTG 58.244 41.667 0.00 0.00 0.00 3.33
2587 5712 5.491078 AGGGTTTCATATCTAAGGGTTGTGA 59.509 40.000 0.00 0.00 0.00 3.58
2588 5713 6.160459 AGGGTTTCATATCTAAGGGTTGTGAT 59.840 38.462 0.00 0.00 0.00 3.06
2589 5714 7.349859 AGGGTTTCATATCTAAGGGTTGTGATA 59.650 37.037 0.00 0.00 0.00 2.15
2590 5715 7.661847 GGGTTTCATATCTAAGGGTTGTGATAG 59.338 40.741 0.00 0.00 0.00 2.08
2591 5716 7.661847 GGTTTCATATCTAAGGGTTGTGATAGG 59.338 40.741 0.00 0.00 0.00 2.57
2592 5717 6.360370 TCATATCTAAGGGTTGTGATAGGC 57.640 41.667 0.00 0.00 0.00 3.93
2593 5718 6.084738 TCATATCTAAGGGTTGTGATAGGCT 58.915 40.000 0.00 0.00 0.00 4.58
2594 5719 6.558775 TCATATCTAAGGGTTGTGATAGGCTT 59.441 38.462 0.00 0.00 0.00 4.35
2595 5720 4.487714 TCTAAGGGTTGTGATAGGCTTG 57.512 45.455 0.00 0.00 0.00 4.01
2596 5721 2.514458 AAGGGTTGTGATAGGCTTGG 57.486 50.000 0.00 0.00 0.00 3.61
2597 5722 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.00 0.00 4.52
2598 5723 1.376609 GGGTTGTGATAGGCTTGGCG 61.377 60.000 0.00 0.00 0.00 5.69
2599 5724 0.392461 GGTTGTGATAGGCTTGGCGA 60.392 55.000 0.00 0.00 0.00 5.54
2600 5725 1.009829 GTTGTGATAGGCTTGGCGAG 58.990 55.000 0.00 0.00 0.00 5.03
2611 5736 4.458666 TGGCGAGCCAACGTAAAA 57.541 50.000 15.24 0.00 44.12 1.52
2612 5737 2.704108 TGGCGAGCCAACGTAAAAA 58.296 47.368 15.24 0.00 44.12 1.94
2613 5738 0.308376 TGGCGAGCCAACGTAAAAAC 59.692 50.000 15.24 0.00 44.12 2.43
2614 5739 0.589708 GGCGAGCCAACGTAAAAACT 59.410 50.000 9.58 0.00 35.81 2.66
2615 5740 1.799994 GGCGAGCCAACGTAAAAACTA 59.200 47.619 9.58 0.00 35.81 2.24
2616 5741 2.159747 GGCGAGCCAACGTAAAAACTAG 60.160 50.000 9.58 0.00 35.81 2.57
2617 5742 2.723923 GCGAGCCAACGTAAAAACTAGC 60.724 50.000 0.00 0.00 35.59 3.42
2618 5743 2.159747 CGAGCCAACGTAAAAACTAGCC 60.160 50.000 0.00 0.00 0.00 3.93
2619 5744 2.809696 GAGCCAACGTAAAAACTAGCCA 59.190 45.455 0.00 0.00 0.00 4.75
2620 5745 2.812011 AGCCAACGTAAAAACTAGCCAG 59.188 45.455 0.00 0.00 0.00 4.85
2621 5746 2.551032 GCCAACGTAAAAACTAGCCAGT 59.449 45.455 0.00 0.00 36.19 4.00
2622 5747 3.364664 GCCAACGTAAAAACTAGCCAGTC 60.365 47.826 0.00 0.00 32.29 3.51
2623 5748 4.062991 CCAACGTAAAAACTAGCCAGTCT 58.937 43.478 0.00 0.00 32.29 3.24
2624 5749 4.514066 CCAACGTAAAAACTAGCCAGTCTT 59.486 41.667 0.00 0.00 32.29 3.01
2625 5750 5.008316 CCAACGTAAAAACTAGCCAGTCTTT 59.992 40.000 0.00 0.00 32.29 2.52
2626 5751 6.459161 CCAACGTAAAAACTAGCCAGTCTTTT 60.459 38.462 0.00 0.85 32.29 2.27
2627 5752 6.056428 ACGTAAAAACTAGCCAGTCTTTTG 57.944 37.500 12.02 0.82 32.29 2.44
2628 5753 5.008316 ACGTAAAAACTAGCCAGTCTTTTGG 59.992 40.000 12.02 8.37 41.35 3.28
2629 5754 4.937201 AAAAACTAGCCAGTCTTTTGGG 57.063 40.909 0.00 0.00 38.72 4.12
2631 5756 4.717279 AAACTAGCCAGTCTTTTGGGTA 57.283 40.909 4.17 4.17 46.57 3.69
2634 5759 1.742308 AGCCAGTCTTTTGGGTAGGA 58.258 50.000 0.00 0.00 46.57 2.94
2635 5760 2.062636 AGCCAGTCTTTTGGGTAGGAA 58.937 47.619 0.00 0.00 46.57 3.36
2636 5761 2.445525 AGCCAGTCTTTTGGGTAGGAAA 59.554 45.455 0.00 0.00 46.57 3.13
2637 5762 2.557056 GCCAGTCTTTTGGGTAGGAAAC 59.443 50.000 0.00 0.00 38.72 2.78
2638 5763 6.821022 AGCCAGTCTTTTGGGTAGGAAACC 62.821 50.000 0.00 0.00 46.57 3.27
2658 5783 2.822764 CCATTTGGGCGAGAGTAGTAC 58.177 52.381 0.00 0.00 0.00 2.73
2659 5784 2.431057 CCATTTGGGCGAGAGTAGTACT 59.569 50.000 1.37 1.37 0.00 2.73
2660 5785 3.635373 CCATTTGGGCGAGAGTAGTACTA 59.365 47.826 1.88 0.00 0.00 1.82
2661 5786 4.261656 CCATTTGGGCGAGAGTAGTACTAG 60.262 50.000 1.87 0.00 0.00 2.57
2662 5787 2.634815 TGGGCGAGAGTAGTACTAGG 57.365 55.000 1.87 0.00 0.00 3.02
2663 5788 2.121948 TGGGCGAGAGTAGTACTAGGA 58.878 52.381 1.87 0.00 0.00 2.94
2664 5789 2.709934 TGGGCGAGAGTAGTACTAGGAT 59.290 50.000 1.87 0.00 0.00 3.24
2665 5790 3.075884 GGGCGAGAGTAGTACTAGGATG 58.924 54.545 1.87 0.00 0.00 3.51
2666 5791 3.075884 GGCGAGAGTAGTACTAGGATGG 58.924 54.545 1.87 0.00 0.00 3.51
2667 5792 3.075884 GCGAGAGTAGTACTAGGATGGG 58.924 54.545 1.87 0.00 0.00 4.00
2668 5793 3.496515 GCGAGAGTAGTACTAGGATGGGT 60.497 52.174 1.87 0.00 0.00 4.51
2669 5794 4.066490 CGAGAGTAGTACTAGGATGGGTG 58.934 52.174 1.87 0.00 0.00 4.61
2670 5795 4.202336 CGAGAGTAGTACTAGGATGGGTGA 60.202 50.000 1.87 0.00 0.00 4.02
2671 5796 5.051409 AGAGTAGTACTAGGATGGGTGAC 57.949 47.826 1.87 0.00 0.00 3.67
2683 5808 4.234673 GGTGACCTCCTGGGAAGT 57.765 61.111 0.00 0.00 38.76 3.01
2684 5809 1.984020 GGTGACCTCCTGGGAAGTC 59.016 63.158 10.52 10.52 36.44 3.01
2685 5810 1.554583 GGTGACCTCCTGGGAAGTCC 61.555 65.000 13.79 6.97 35.38 3.85
2686 5811 0.545548 GTGACCTCCTGGGAAGTCCT 60.546 60.000 13.79 0.00 35.38 3.85
2687 5812 0.252284 TGACCTCCTGGGAAGTCCTC 60.252 60.000 13.79 0.00 35.38 3.71
2688 5813 1.305381 ACCTCCTGGGAAGTCCTCG 60.305 63.158 0.00 0.00 38.76 4.63
2689 5814 1.305381 CCTCCTGGGAAGTCCTCGT 60.305 63.158 0.00 0.00 37.23 4.18
2690 5815 1.608717 CCTCCTGGGAAGTCCTCGTG 61.609 65.000 0.00 0.00 37.23 4.35
2691 5816 0.612174 CTCCTGGGAAGTCCTCGTGA 60.612 60.000 0.00 0.00 36.20 4.35
2692 5817 0.178944 TCCTGGGAAGTCCTCGTGAA 60.179 55.000 0.00 0.00 36.20 3.18
2693 5818 0.685097 CCTGGGAAGTCCTCGTGAAA 59.315 55.000 0.00 0.00 36.20 2.69
2694 5819 1.338200 CCTGGGAAGTCCTCGTGAAAG 60.338 57.143 0.00 0.00 36.20 2.62
2695 5820 0.685097 TGGGAAGTCCTCGTGAAAGG 59.315 55.000 0.00 0.00 37.81 3.11
2696 5821 0.036294 GGGAAGTCCTCGTGAAAGGG 60.036 60.000 0.00 0.00 37.02 3.95
2697 5822 0.685660 GGAAGTCCTCGTGAAAGGGT 59.314 55.000 0.00 0.00 37.02 4.34
2698 5823 1.071857 GGAAGTCCTCGTGAAAGGGTT 59.928 52.381 0.00 0.00 37.02 4.11
2699 5824 2.486727 GGAAGTCCTCGTGAAAGGGTTT 60.487 50.000 0.00 0.00 37.02 3.27
2700 5825 2.545537 AGTCCTCGTGAAAGGGTTTC 57.454 50.000 0.00 0.00 40.08 2.78
2701 5826 1.766496 AGTCCTCGTGAAAGGGTTTCA 59.234 47.619 0.00 0.00 46.68 2.69
2711 5836 5.975988 TGAAAGGGTTTCATATCTAGCCT 57.024 39.130 0.00 0.00 44.21 4.58
2713 5838 6.827727 TGAAAGGGTTTCATATCTAGCCTAC 58.172 40.000 0.00 0.00 44.21 3.18
2714 5839 5.827326 AAGGGTTTCATATCTAGCCTACC 57.173 43.478 0.00 0.00 38.75 3.18
2715 5840 4.168883 AGGGTTTCATATCTAGCCTACCC 58.831 47.826 0.00 0.00 43.42 3.69
2716 5841 3.263681 GGGTTTCATATCTAGCCTACCCC 59.736 52.174 0.00 0.00 38.39 4.95
2717 5842 3.908103 GGTTTCATATCTAGCCTACCCCA 59.092 47.826 0.00 0.00 0.00 4.96
2718 5843 4.349930 GGTTTCATATCTAGCCTACCCCAA 59.650 45.833 0.00 0.00 0.00 4.12
2719 5844 5.306394 GTTTCATATCTAGCCTACCCCAAC 58.694 45.833 0.00 0.00 0.00 3.77
2720 5845 4.487282 TCATATCTAGCCTACCCCAACT 57.513 45.455 0.00 0.00 0.00 3.16
2721 5846 4.827789 TCATATCTAGCCTACCCCAACTT 58.172 43.478 0.00 0.00 0.00 2.66
2722 5847 4.593206 TCATATCTAGCCTACCCCAACTTG 59.407 45.833 0.00 0.00 0.00 3.16
2723 5848 2.337359 TCTAGCCTACCCCAACTTGT 57.663 50.000 0.00 0.00 0.00 3.16
2724 5849 2.627933 TCTAGCCTACCCCAACTTGTT 58.372 47.619 0.00 0.00 0.00 2.83
2725 5850 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2726 5851 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2738 5863 5.213891 CAACTTGTTTGGGATAAAAGGCT 57.786 39.130 0.00 0.00 0.00 4.58
2739 5864 5.610398 CAACTTGTTTGGGATAAAAGGCTT 58.390 37.500 0.00 0.00 0.00 4.35
2740 5865 5.468540 ACTTGTTTGGGATAAAAGGCTTC 57.531 39.130 0.00 0.00 0.00 3.86
2741 5866 4.022329 ACTTGTTTGGGATAAAAGGCTTCG 60.022 41.667 0.00 0.00 0.00 3.79
2742 5867 3.492337 TGTTTGGGATAAAAGGCTTCGT 58.508 40.909 0.00 0.00 0.00 3.85
2743 5868 4.653868 TGTTTGGGATAAAAGGCTTCGTA 58.346 39.130 0.00 0.00 0.00 3.43
2744 5869 5.071370 TGTTTGGGATAAAAGGCTTCGTAA 58.929 37.500 0.00 0.00 0.00 3.18
2745 5870 5.182380 TGTTTGGGATAAAAGGCTTCGTAAG 59.818 40.000 0.00 0.00 0.00 2.34
2746 5871 4.563140 TGGGATAAAAGGCTTCGTAAGT 57.437 40.909 0.00 0.00 39.48 2.24
2747 5872 5.680594 TGGGATAAAAGGCTTCGTAAGTA 57.319 39.130 0.00 0.00 39.48 2.24
2748 5873 6.052405 TGGGATAAAAGGCTTCGTAAGTAA 57.948 37.500 0.00 0.00 39.48 2.24
2749 5874 6.110707 TGGGATAAAAGGCTTCGTAAGTAAG 58.889 40.000 0.00 0.00 39.48 2.34
2750 5875 6.111382 GGGATAAAAGGCTTCGTAAGTAAGT 58.889 40.000 0.00 0.00 39.48 2.24
2751 5876 7.093377 TGGGATAAAAGGCTTCGTAAGTAAGTA 60.093 37.037 0.00 0.00 39.48 2.24
2752 5877 7.765819 GGGATAAAAGGCTTCGTAAGTAAGTAA 59.234 37.037 0.00 0.00 39.48 2.24
2753 5878 8.815189 GGATAAAAGGCTTCGTAAGTAAGTAAG 58.185 37.037 0.00 0.00 39.48 2.34
2754 5879 9.363763 GATAAAAGGCTTCGTAAGTAAGTAAGT 57.636 33.333 0.00 0.00 39.48 2.24
2811 5936 4.362677 TCCTTGTTAGGTCTGGCTAGATT 58.637 43.478 2.00 0.00 42.60 2.40
3767 6940 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
3768 6941 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
4227 7971 5.347012 ACAAATTTTGTGCTGCTAATTGC 57.653 34.783 13.80 0.00 43.48 3.56
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.661563 TTCACAACAACCGTCTATTCTATATTT 57.338 29.630 0.00 0.00 0.00 1.40
3 4 9.661563 TTTTCACAACAACCGTCTATTCTATAT 57.338 29.630 0.00 0.00 0.00 0.86
5 6 7.972832 TTTTCACAACAACCGTCTATTCTAT 57.027 32.000 0.00 0.00 0.00 1.98
6 7 7.442969 ACATTTTCACAACAACCGTCTATTCTA 59.557 33.333 0.00 0.00 0.00 2.10
7 8 6.262273 ACATTTTCACAACAACCGTCTATTCT 59.738 34.615 0.00 0.00 0.00 2.40
8 9 6.435428 ACATTTTCACAACAACCGTCTATTC 58.565 36.000 0.00 0.00 0.00 1.75
10 11 6.708949 AGTACATTTTCACAACAACCGTCTAT 59.291 34.615 0.00 0.00 0.00 1.98
13 14 5.164606 AGTACATTTTCACAACAACCGTC 57.835 39.130 0.00 0.00 0.00 4.79
15 16 6.799925 GGATTAGTACATTTTCACAACAACCG 59.200 38.462 0.00 0.00 0.00 4.44
16 17 6.799925 CGGATTAGTACATTTTCACAACAACC 59.200 38.462 0.00 0.00 0.00 3.77
17 18 7.532884 GTCGGATTAGTACATTTTCACAACAAC 59.467 37.037 0.00 0.00 0.00 3.32
18 19 7.569774 CGTCGGATTAGTACATTTTCACAACAA 60.570 37.037 0.00 0.00 0.00 2.83
19 20 6.128769 CGTCGGATTAGTACATTTTCACAACA 60.129 38.462 0.00 0.00 0.00 3.33
20 21 6.089820 TCGTCGGATTAGTACATTTTCACAAC 59.910 38.462 0.00 0.00 0.00 3.32
22 23 5.712004 TCGTCGGATTAGTACATTTTCACA 58.288 37.500 0.00 0.00 0.00 3.58
23 24 6.089820 TGTTCGTCGGATTAGTACATTTTCAC 59.910 38.462 0.00 0.00 0.00 3.18
25 26 6.636666 TGTTCGTCGGATTAGTACATTTTC 57.363 37.500 0.00 0.00 0.00 2.29
27 28 5.579511 CCTTGTTCGTCGGATTAGTACATTT 59.420 40.000 0.00 0.00 0.00 2.32
28 29 5.105635 TCCTTGTTCGTCGGATTAGTACATT 60.106 40.000 0.00 0.00 0.00 2.71
29 30 4.400251 TCCTTGTTCGTCGGATTAGTACAT 59.600 41.667 0.00 0.00 0.00 2.29
30 31 3.758023 TCCTTGTTCGTCGGATTAGTACA 59.242 43.478 0.00 0.00 0.00 2.90
31 32 4.361451 TCCTTGTTCGTCGGATTAGTAC 57.639 45.455 0.00 0.00 0.00 2.73
32 33 4.641541 TGATCCTTGTTCGTCGGATTAGTA 59.358 41.667 0.00 0.00 37.66 1.82
34 35 4.041740 TGATCCTTGTTCGTCGGATTAG 57.958 45.455 0.00 0.00 37.66 1.73
35 36 4.459390 TTGATCCTTGTTCGTCGGATTA 57.541 40.909 0.00 0.00 37.66 1.75
37 38 3.328382 TTTGATCCTTGTTCGTCGGAT 57.672 42.857 0.00 0.00 40.13 4.18
38 39 2.823924 TTTGATCCTTGTTCGTCGGA 57.176 45.000 0.00 0.00 0.00 4.55
39 40 2.351726 GGATTTGATCCTTGTTCGTCGG 59.648 50.000 0.00 0.00 46.19 4.79
51 52 6.294731 GCATGGGTACTTTATGGGATTTGATC 60.295 42.308 0.00 0.00 0.00 2.92
52 53 5.539955 GCATGGGTACTTTATGGGATTTGAT 59.460 40.000 0.00 0.00 0.00 2.57
53 54 4.892934 GCATGGGTACTTTATGGGATTTGA 59.107 41.667 0.00 0.00 0.00 2.69
54 55 4.648762 TGCATGGGTACTTTATGGGATTTG 59.351 41.667 0.00 0.00 0.00 2.32
55 56 4.877773 TGCATGGGTACTTTATGGGATTT 58.122 39.130 0.00 0.00 0.00 2.17
57 58 3.463329 ACTGCATGGGTACTTTATGGGAT 59.537 43.478 0.00 0.00 0.00 3.85
60 61 2.951642 CCACTGCATGGGTACTTTATGG 59.048 50.000 7.15 0.00 45.95 2.74
73 74 1.001641 GGGTCTTGAGCCACTGCAT 60.002 57.895 13.31 0.00 41.13 3.96
74 75 1.782201 ATGGGTCTTGAGCCACTGCA 61.782 55.000 21.70 1.35 41.13 4.41
75 76 1.001641 ATGGGTCTTGAGCCACTGC 60.002 57.895 21.70 0.00 37.95 4.40
76 77 1.310933 GCATGGGTCTTGAGCCACTG 61.311 60.000 21.70 19.53 0.00 3.66
77 78 1.001641 GCATGGGTCTTGAGCCACT 60.002 57.895 21.70 9.96 0.00 4.00
79 80 0.112995 AAAGCATGGGTCTTGAGCCA 59.887 50.000 21.55 21.55 0.00 4.75
80 81 2.128771 TAAAGCATGGGTCTTGAGCC 57.871 50.000 11.53 11.53 0.00 4.70
82 83 3.633986 GGGATTAAAGCATGGGTCTTGAG 59.366 47.826 0.00 0.00 0.00 3.02
86 87 1.564348 ACGGGATTAAAGCATGGGTCT 59.436 47.619 0.00 0.00 0.00 3.85
87 88 2.052782 ACGGGATTAAAGCATGGGTC 57.947 50.000 0.00 0.00 0.00 4.46
88 89 2.240160 TGTACGGGATTAAAGCATGGGT 59.760 45.455 0.00 0.00 0.00 4.51
91 92 4.791163 CGTTTTGTACGGGATTAAAGCATG 59.209 41.667 0.00 0.00 46.42 4.06
93 94 4.407496 CGTTTTGTACGGGATTAAAGCA 57.593 40.909 0.00 0.00 46.42 3.91
107 108 0.388659 ATGCATGCCACACGTTTTGT 59.611 45.000 16.68 0.00 39.97 2.83
108 109 1.500108 AATGCATGCCACACGTTTTG 58.500 45.000 16.68 0.00 0.00 2.44
109 110 2.134346 GAAATGCATGCCACACGTTTT 58.866 42.857 16.68 3.74 0.00 2.43
110 111 1.340889 AGAAATGCATGCCACACGTTT 59.659 42.857 16.68 6.61 0.00 3.60
111 112 0.961019 AGAAATGCATGCCACACGTT 59.039 45.000 16.68 0.00 0.00 3.99
113 114 2.068837 AAAGAAATGCATGCCACACG 57.931 45.000 16.68 0.00 0.00 4.49
114 115 4.439305 TCTAAAGAAATGCATGCCACAC 57.561 40.909 16.68 4.60 0.00 3.82
115 116 4.280425 TGTTCTAAAGAAATGCATGCCACA 59.720 37.500 16.68 0.00 35.58 4.17
116 117 4.622740 GTGTTCTAAAGAAATGCATGCCAC 59.377 41.667 16.68 7.16 35.58 5.01
117 118 4.280425 TGTGTTCTAAAGAAATGCATGCCA 59.720 37.500 16.68 3.52 35.58 4.92
118 119 4.808558 TGTGTTCTAAAGAAATGCATGCC 58.191 39.130 16.68 0.00 35.58 4.40
119 120 5.220340 GCATGTGTTCTAAAGAAATGCATGC 60.220 40.000 24.69 24.69 45.82 4.06
120 121 5.865013 TGCATGTGTTCTAAAGAAATGCATG 59.135 36.000 19.37 18.75 44.30 4.06
121 122 6.028146 TGCATGTGTTCTAAAGAAATGCAT 57.972 33.333 19.37 10.69 44.30 3.96
122 123 5.450592 TGCATGTGTTCTAAAGAAATGCA 57.549 34.783 19.37 19.37 45.66 3.96
124 125 6.097356 AGCATGCATGTGTTCTAAAGAAATG 58.903 36.000 26.79 0.00 35.58 2.32
125 126 6.276832 AGCATGCATGTGTTCTAAAGAAAT 57.723 33.333 26.79 0.00 35.58 2.17
126 127 5.710513 AGCATGCATGTGTTCTAAAGAAA 57.289 34.783 26.79 0.00 35.58 2.52
127 128 5.710513 AAGCATGCATGTGTTCTAAAGAA 57.289 34.783 26.79 0.00 0.00 2.52
128 129 7.395190 AATAAGCATGCATGTGTTCTAAAGA 57.605 32.000 26.79 6.45 0.00 2.52
130 131 8.279970 ACTAATAAGCATGCATGTGTTCTAAA 57.720 30.769 26.79 8.58 0.00 1.85
131 132 7.864108 ACTAATAAGCATGCATGTGTTCTAA 57.136 32.000 26.79 7.73 0.00 2.10
132 133 7.201723 CCAACTAATAAGCATGCATGTGTTCTA 60.202 37.037 26.79 12.67 0.00 2.10
133 134 6.405065 CCAACTAATAAGCATGCATGTGTTCT 60.405 38.462 26.79 13.11 0.00 3.01
134 135 5.745294 CCAACTAATAAGCATGCATGTGTTC 59.255 40.000 26.79 10.97 0.00 3.18
135 136 5.653507 CCAACTAATAAGCATGCATGTGTT 58.346 37.500 26.79 21.38 0.00 3.32
136 137 4.440525 GCCAACTAATAAGCATGCATGTGT 60.441 41.667 26.79 17.24 0.00 3.72
137 138 4.046462 GCCAACTAATAAGCATGCATGTG 58.954 43.478 26.79 13.76 0.00 3.21
138 139 3.956199 AGCCAACTAATAAGCATGCATGT 59.044 39.130 26.79 11.59 0.00 3.21
139 140 4.579454 AGCCAACTAATAAGCATGCATG 57.421 40.909 22.70 22.70 0.00 4.06
140 141 4.217118 GCTAGCCAACTAATAAGCATGCAT 59.783 41.667 21.98 11.22 0.00 3.96
141 142 3.565482 GCTAGCCAACTAATAAGCATGCA 59.435 43.478 21.98 0.00 0.00 3.96
142 143 3.817647 AGCTAGCCAACTAATAAGCATGC 59.182 43.478 10.51 10.51 0.00 4.06
143 144 7.148340 GGATTAGCTAGCCAACTAATAAGCATG 60.148 40.741 12.13 0.00 38.80 4.06
145 146 6.183361 TGGATTAGCTAGCCAACTAATAAGCA 60.183 38.462 12.13 0.00 38.80 3.91
147 148 7.897575 CTGGATTAGCTAGCCAACTAATAAG 57.102 40.000 12.13 6.66 38.80 1.73
164 165 7.867305 TTCCGTAACAATTAATGCTGGATTA 57.133 32.000 0.00 0.00 0.00 1.75
165 166 6.767524 TTCCGTAACAATTAATGCTGGATT 57.232 33.333 0.00 0.00 0.00 3.01
166 167 6.959639 ATTCCGTAACAATTAATGCTGGAT 57.040 33.333 0.00 0.00 0.00 3.41
168 169 6.196353 CGAAATTCCGTAACAATTAATGCTGG 59.804 38.462 0.00 0.00 0.00 4.85
169 170 6.196353 CCGAAATTCCGTAACAATTAATGCTG 59.804 38.462 0.00 0.00 0.00 4.41
170 171 6.262601 CCGAAATTCCGTAACAATTAATGCT 58.737 36.000 0.00 0.00 0.00 3.79
171 172 5.457473 CCCGAAATTCCGTAACAATTAATGC 59.543 40.000 0.00 0.00 0.00 3.56
173 174 6.404954 CCACCCGAAATTCCGTAACAATTAAT 60.405 38.462 0.00 0.00 0.00 1.40
174 175 5.106237 CCACCCGAAATTCCGTAACAATTAA 60.106 40.000 0.00 0.00 0.00 1.40
175 176 4.395542 CCACCCGAAATTCCGTAACAATTA 59.604 41.667 0.00 0.00 0.00 1.40
176 177 3.191791 CCACCCGAAATTCCGTAACAATT 59.808 43.478 0.00 0.00 0.00 2.32
177 178 2.750712 CCACCCGAAATTCCGTAACAAT 59.249 45.455 0.00 0.00 0.00 2.71
178 179 2.152830 CCACCCGAAATTCCGTAACAA 58.847 47.619 0.00 0.00 0.00 2.83
179 180 1.611148 CCCACCCGAAATTCCGTAACA 60.611 52.381 0.00 0.00 0.00 2.41
180 181 1.089112 CCCACCCGAAATTCCGTAAC 58.911 55.000 0.00 0.00 0.00 2.50
181 182 0.982704 TCCCACCCGAAATTCCGTAA 59.017 50.000 0.00 0.00 0.00 3.18
182 183 0.538118 CTCCCACCCGAAATTCCGTA 59.462 55.000 0.00 0.00 0.00 4.02
185 186 2.209690 TTTCTCCCACCCGAAATTCC 57.790 50.000 0.00 0.00 0.00 3.01
188 189 3.192633 CGAATTTTTCTCCCACCCGAAAT 59.807 43.478 0.00 0.00 0.00 2.17
189 190 2.554893 CGAATTTTTCTCCCACCCGAAA 59.445 45.455 0.00 0.00 0.00 3.46
190 191 2.156098 CGAATTTTTCTCCCACCCGAA 58.844 47.619 0.00 0.00 0.00 4.30
191 192 1.816074 CGAATTTTTCTCCCACCCGA 58.184 50.000 0.00 0.00 0.00 5.14
192 193 0.170339 GCGAATTTTTCTCCCACCCG 59.830 55.000 0.00 0.00 0.00 5.28
194 195 0.170339 CCGCGAATTTTTCTCCCACC 59.830 55.000 8.23 0.00 0.00 4.61
195 196 0.456142 GCCGCGAATTTTTCTCCCAC 60.456 55.000 8.23 0.00 0.00 4.61
196 197 0.891449 TGCCGCGAATTTTTCTCCCA 60.891 50.000 8.23 0.00 0.00 4.37
198 199 0.179163 CCTGCCGCGAATTTTTCTCC 60.179 55.000 8.23 0.00 0.00 3.71
199 200 0.802494 TCCTGCCGCGAATTTTTCTC 59.198 50.000 8.23 0.00 0.00 2.87
201 202 1.827578 GATCCTGCCGCGAATTTTTC 58.172 50.000 8.23 0.00 0.00 2.29
203 204 1.714899 CCGATCCTGCCGCGAATTTT 61.715 55.000 8.23 0.00 0.00 1.82
204 205 2.180204 CCGATCCTGCCGCGAATTT 61.180 57.895 8.23 0.00 0.00 1.82
205 206 2.588877 CCGATCCTGCCGCGAATT 60.589 61.111 8.23 0.00 0.00 2.17
207 208 4.207281 CTCCGATCCTGCCGCGAA 62.207 66.667 8.23 0.00 0.00 4.70
209 210 3.544167 CTACTCCGATCCTGCCGCG 62.544 68.421 0.00 0.00 0.00 6.46
210 211 1.528292 ATCTACTCCGATCCTGCCGC 61.528 60.000 0.00 0.00 0.00 6.53
211 212 0.242286 CATCTACTCCGATCCTGCCG 59.758 60.000 0.00 0.00 0.00 5.69
213 214 2.487762 CTCTCATCTACTCCGATCCTGC 59.512 54.545 0.00 0.00 0.00 4.85
214 215 3.501828 CACTCTCATCTACTCCGATCCTG 59.498 52.174 0.00 0.00 0.00 3.86
215 216 3.750371 CACTCTCATCTACTCCGATCCT 58.250 50.000 0.00 0.00 0.00 3.24
217 218 2.095969 CGCACTCTCATCTACTCCGATC 60.096 54.545 0.00 0.00 0.00 3.69
219 220 1.300481 CGCACTCTCATCTACTCCGA 58.700 55.000 0.00 0.00 0.00 4.55
220 221 0.309302 CCGCACTCTCATCTACTCCG 59.691 60.000 0.00 0.00 0.00 4.63
221 222 0.671251 CCCGCACTCTCATCTACTCC 59.329 60.000 0.00 0.00 0.00 3.85
222 223 1.606668 CTCCCGCACTCTCATCTACTC 59.393 57.143 0.00 0.00 0.00 2.59
223 224 1.686355 CTCCCGCACTCTCATCTACT 58.314 55.000 0.00 0.00 0.00 2.57
224 225 0.671251 CCTCCCGCACTCTCATCTAC 59.329 60.000 0.00 0.00 0.00 2.59
225 226 0.259065 ACCTCCCGCACTCTCATCTA 59.741 55.000 0.00 0.00 0.00 1.98
226 227 1.000993 ACCTCCCGCACTCTCATCT 59.999 57.895 0.00 0.00 0.00 2.90
227 228 1.142748 CACCTCCCGCACTCTCATC 59.857 63.158 0.00 0.00 0.00 2.92
229 230 3.695606 GCACCTCCCGCACTCTCA 61.696 66.667 0.00 0.00 0.00 3.27
237 238 1.852067 CTTTGAAACCGCACCTCCCG 61.852 60.000 0.00 0.00 0.00 5.14
239 240 0.536460 TCCTTTGAAACCGCACCTCC 60.536 55.000 0.00 0.00 0.00 4.30
240 241 1.314730 TTCCTTTGAAACCGCACCTC 58.685 50.000 0.00 0.00 0.00 3.85
242 243 1.868109 GCTTTCCTTTGAAACCGCACC 60.868 52.381 0.00 0.00 35.58 5.01
243 244 1.487482 GCTTTCCTTTGAAACCGCAC 58.513 50.000 0.00 0.00 35.58 5.34
244 245 0.030101 CGCTTTCCTTTGAAACCGCA 59.970 50.000 0.00 0.00 34.06 5.69
247 248 2.552743 AGTAGCGCTTTCCTTTGAAACC 59.447 45.455 18.68 0.00 35.58 3.27
249 250 6.430000 AGATTAAGTAGCGCTTTCCTTTGAAA 59.570 34.615 18.68 7.66 38.57 2.69
250 251 5.938125 AGATTAAGTAGCGCTTTCCTTTGAA 59.062 36.000 18.68 8.35 38.57 2.69
251 252 5.488341 AGATTAAGTAGCGCTTTCCTTTGA 58.512 37.500 18.68 8.51 38.57 2.69
252 253 5.582665 AGAGATTAAGTAGCGCTTTCCTTTG 59.417 40.000 18.68 0.00 38.57 2.77
253 254 5.735766 AGAGATTAAGTAGCGCTTTCCTTT 58.264 37.500 18.68 6.01 38.57 3.11
255 256 6.658188 ATAGAGATTAAGTAGCGCTTTCCT 57.342 37.500 18.68 6.68 38.57 3.36
257 258 8.582433 AAGAATAGAGATTAAGTAGCGCTTTC 57.418 34.615 18.68 9.96 38.57 2.62
260 261 9.632807 CATTAAGAATAGAGATTAAGTAGCGCT 57.367 33.333 17.26 17.26 0.00 5.92
279 280 9.591792 CACTGACTATCAATTGAGACATTAAGA 57.408 33.333 14.54 0.00 0.00 2.10
281 282 9.725019 AACACTGACTATCAATTGAGACATTAA 57.275 29.630 14.54 0.00 0.00 1.40
282 283 9.725019 AAACACTGACTATCAATTGAGACATTA 57.275 29.630 14.54 0.04 0.00 1.90
283 284 8.627208 AAACACTGACTATCAATTGAGACATT 57.373 30.769 14.54 0.00 0.00 2.71
284 285 7.063898 CGAAACACTGACTATCAATTGAGACAT 59.936 37.037 14.54 0.00 0.00 3.06
286 287 6.183360 CCGAAACACTGACTATCAATTGAGAC 60.183 42.308 14.54 2.53 0.00 3.36
287 288 5.869344 CCGAAACACTGACTATCAATTGAGA 59.131 40.000 14.54 8.55 0.00 3.27
288 289 5.063944 CCCGAAACACTGACTATCAATTGAG 59.936 44.000 14.54 3.71 0.00 3.02
290 291 4.695455 ACCCGAAACACTGACTATCAATTG 59.305 41.667 0.00 0.00 0.00 2.32
291 292 4.906618 ACCCGAAACACTGACTATCAATT 58.093 39.130 0.00 0.00 0.00 2.32
292 293 4.553330 ACCCGAAACACTGACTATCAAT 57.447 40.909 0.00 0.00 0.00 2.57
293 294 4.345859 AACCCGAAACACTGACTATCAA 57.654 40.909 0.00 0.00 0.00 2.57
294 295 4.345859 AAACCCGAAACACTGACTATCA 57.654 40.909 0.00 0.00 0.00 2.15
295 296 6.980051 ATAAAACCCGAAACACTGACTATC 57.020 37.500 0.00 0.00 0.00 2.08
296 297 7.754851 AAATAAAACCCGAAACACTGACTAT 57.245 32.000 0.00 0.00 0.00 2.12
297 298 7.571080 AAAATAAAACCCGAAACACTGACTA 57.429 32.000 0.00 0.00 0.00 2.59
299 300 6.532302 ACAAAAATAAAACCCGAAACACTGAC 59.468 34.615 0.00 0.00 0.00 3.51
300 301 6.631962 ACAAAAATAAAACCCGAAACACTGA 58.368 32.000 0.00 0.00 0.00 3.41
301 302 6.895607 ACAAAAATAAAACCCGAAACACTG 57.104 33.333 0.00 0.00 0.00 3.66
318 319 9.413048 GGTTGGACGAAAATGATAATACAAAAA 57.587 29.630 0.00 0.00 0.00 1.94
319 320 8.577296 TGGTTGGACGAAAATGATAATACAAAA 58.423 29.630 0.00 0.00 0.00 2.44
323 324 9.581099 AAAATGGTTGGACGAAAATGATAATAC 57.419 29.630 0.00 0.00 0.00 1.89
325 326 7.487829 CGAAAATGGTTGGACGAAAATGATAAT 59.512 33.333 0.00 0.00 0.00 1.28
329 330 4.036971 ACGAAAATGGTTGGACGAAAATGA 59.963 37.500 0.00 0.00 0.00 2.57
330 331 4.295051 ACGAAAATGGTTGGACGAAAATG 58.705 39.130 0.00 0.00 0.00 2.32
379 380 1.674651 GGGGTGCGAGAAAGGGAAC 60.675 63.158 0.00 0.00 0.00 3.62
380 381 2.754375 GGGGTGCGAGAAAGGGAA 59.246 61.111 0.00 0.00 0.00 3.97
385 386 2.031465 GGTTCGGGGTGCGAGAAA 59.969 61.111 0.00 0.00 0.00 2.52
402 403 2.743149 TTTTTAGCGGGTCGGGCG 60.743 61.111 0.00 0.00 35.00 6.13
1125 1174 3.213402 CGAGGAGGAGGCGGAGAC 61.213 72.222 0.00 0.00 0.00 3.36
1225 1274 0.035439 GCAAATCAGGAGGGTTCGGA 60.035 55.000 0.00 0.00 0.00 4.55
1267 1321 7.546250 TGTCCTATCTCTGAAGAAGAAAAGT 57.454 36.000 0.00 0.00 34.49 2.66
1572 1737 3.621794 CTTTTTCTTCCGTCTGCAACAG 58.378 45.455 0.00 0.00 0.00 3.16
1597 4638 4.824479 TGATGCAGACAGGAACTTCATA 57.176 40.909 0.00 0.00 34.60 2.15
1671 4751 5.012768 ACATAACCCTTGTAGATAATCCCCG 59.987 44.000 0.00 0.00 0.00 5.73
1672 4752 6.449830 ACATAACCCTTGTAGATAATCCCC 57.550 41.667 0.00 0.00 0.00 4.81
2055 5177 8.443160 TGCATGTTTCGAAATTAAACAAAACAA 58.557 25.926 14.69 0.00 46.59 2.83
2368 5493 2.972713 TGCTTACTCAGAGGACCAAACT 59.027 45.455 1.53 0.00 0.00 2.66
2369 5494 3.067833 GTGCTTACTCAGAGGACCAAAC 58.932 50.000 1.53 0.00 30.23 2.93
2370 5495 2.972713 AGTGCTTACTCAGAGGACCAAA 59.027 45.455 1.53 0.00 36.27 3.28
2371 5496 2.563179 GAGTGCTTACTCAGAGGACCAA 59.437 50.000 1.53 0.00 36.27 3.67
2372 5497 2.171840 GAGTGCTTACTCAGAGGACCA 58.828 52.381 1.53 0.00 36.27 4.02
2373 5498 1.133407 CGAGTGCTTACTCAGAGGACC 59.867 57.143 1.53 0.00 36.27 4.46
2374 5499 1.133407 CCGAGTGCTTACTCAGAGGAC 59.867 57.143 1.53 0.00 36.59 3.85
2375 5500 1.271982 ACCGAGTGCTTACTCAGAGGA 60.272 52.381 1.53 0.00 36.59 3.71
2376 5501 1.178276 ACCGAGTGCTTACTCAGAGG 58.822 55.000 1.53 3.91 36.59 3.69
2377 5502 2.416162 GGAACCGAGTGCTTACTCAGAG 60.416 54.545 8.04 0.00 36.59 3.35
2378 5503 1.544691 GGAACCGAGTGCTTACTCAGA 59.455 52.381 8.04 0.00 36.59 3.27
2379 5504 1.272490 TGGAACCGAGTGCTTACTCAG 59.728 52.381 8.04 0.00 36.59 3.35
2380 5505 1.334160 TGGAACCGAGTGCTTACTCA 58.666 50.000 8.04 0.00 36.59 3.41
2381 5506 2.338500 CTTGGAACCGAGTGCTTACTC 58.662 52.381 0.18 0.00 0.00 2.59
2382 5507 1.608283 GCTTGGAACCGAGTGCTTACT 60.608 52.381 9.51 0.00 0.00 2.24
2383 5508 0.796927 GCTTGGAACCGAGTGCTTAC 59.203 55.000 9.51 0.00 0.00 2.34
2384 5509 0.321298 GGCTTGGAACCGAGTGCTTA 60.321 55.000 9.51 0.00 0.00 3.09
2385 5510 1.600916 GGCTTGGAACCGAGTGCTT 60.601 57.895 9.51 0.00 0.00 3.91
2386 5511 1.192146 TAGGCTTGGAACCGAGTGCT 61.192 55.000 9.51 0.00 0.00 4.40
2387 5512 0.107654 ATAGGCTTGGAACCGAGTGC 60.108 55.000 9.51 0.00 0.00 4.40
2388 5513 1.066143 ACATAGGCTTGGAACCGAGTG 60.066 52.381 9.51 3.21 0.00 3.51
2389 5514 1.207329 GACATAGGCTTGGAACCGAGT 59.793 52.381 9.51 0.00 0.00 4.18
2390 5515 1.482593 AGACATAGGCTTGGAACCGAG 59.517 52.381 0.00 3.86 0.00 4.63
2391 5516 1.568504 AGACATAGGCTTGGAACCGA 58.431 50.000 0.00 0.00 0.00 4.69
2392 5517 2.093447 AGAAGACATAGGCTTGGAACCG 60.093 50.000 0.00 0.00 0.00 4.44
2393 5518 3.636153 AGAAGACATAGGCTTGGAACC 57.364 47.619 0.00 0.00 0.00 3.62
2394 5519 4.698575 CCTAGAAGACATAGGCTTGGAAC 58.301 47.826 0.00 0.00 33.76 3.62
2402 5527 4.464069 GGCTATGCCTAGAAGACATAGG 57.536 50.000 16.76 0.00 46.69 2.57
2415 5540 2.203209 CTTGGGACCGGCTATGCC 60.203 66.667 0.00 0.00 46.75 4.40
2416 5541 2.902343 GCTTGGGACCGGCTATGC 60.902 66.667 0.00 0.00 0.00 3.14
2417 5542 2.203209 GGCTTGGGACCGGCTATG 60.203 66.667 0.00 0.00 0.00 2.23
2418 5543 3.489513 GGGCTTGGGACCGGCTAT 61.490 66.667 0.00 0.00 0.00 2.97
2428 5553 1.077716 CTCCTTTACCCGGGCTTGG 60.078 63.158 24.08 17.99 0.00 3.61
2429 5554 1.077716 CCTCCTTTACCCGGGCTTG 60.078 63.158 24.08 8.51 0.00 4.01
2430 5555 1.229723 TCCTCCTTTACCCGGGCTT 60.230 57.895 24.08 4.08 0.00 4.35
2431 5556 1.689582 CTCCTCCTTTACCCGGGCT 60.690 63.158 24.08 10.93 0.00 5.19
2432 5557 2.743179 CCTCCTCCTTTACCCGGGC 61.743 68.421 24.08 0.00 0.00 6.13
2433 5558 2.070650 CCCTCCTCCTTTACCCGGG 61.071 68.421 22.25 22.25 0.00 5.73
2434 5559 0.912968 AACCCTCCTCCTTTACCCGG 60.913 60.000 0.00 0.00 0.00 5.73
2435 5560 0.252197 CAACCCTCCTCCTTTACCCG 59.748 60.000 0.00 0.00 0.00 5.28
2436 5561 1.004394 CACAACCCTCCTCCTTTACCC 59.996 57.143 0.00 0.00 0.00 3.69
2437 5562 1.982958 TCACAACCCTCCTCCTTTACC 59.017 52.381 0.00 0.00 0.00 2.85
2438 5563 4.141688 CCTATCACAACCCTCCTCCTTTAC 60.142 50.000 0.00 0.00 0.00 2.01
2439 5564 4.037927 CCTATCACAACCCTCCTCCTTTA 58.962 47.826 0.00 0.00 0.00 1.85
2440 5565 2.846827 CCTATCACAACCCTCCTCCTTT 59.153 50.000 0.00 0.00 0.00 3.11
2441 5566 2.482494 CCTATCACAACCCTCCTCCTT 58.518 52.381 0.00 0.00 0.00 3.36
2442 5567 1.972207 GCCTATCACAACCCTCCTCCT 60.972 57.143 0.00 0.00 0.00 3.69
2443 5568 0.470341 GCCTATCACAACCCTCCTCC 59.530 60.000 0.00 0.00 0.00 4.30
2444 5569 1.501582 AGCCTATCACAACCCTCCTC 58.498 55.000 0.00 0.00 0.00 3.71
2445 5570 1.561542 CAAGCCTATCACAACCCTCCT 59.438 52.381 0.00 0.00 0.00 3.69
2446 5571 1.408822 CCAAGCCTATCACAACCCTCC 60.409 57.143 0.00 0.00 0.00 4.30
2447 5572 2.019156 GCCAAGCCTATCACAACCCTC 61.019 57.143 0.00 0.00 0.00 4.30
2448 5573 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.00 0.00 4.34
2449 5574 1.376609 CGCCAAGCCTATCACAACCC 61.377 60.000 0.00 0.00 0.00 4.11
2450 5575 0.392461 TCGCCAAGCCTATCACAACC 60.392 55.000 0.00 0.00 0.00 3.77
2451 5576 1.009829 CTCGCCAAGCCTATCACAAC 58.990 55.000 0.00 0.00 0.00 3.32
2452 5577 0.744414 GCTCGCCAAGCCTATCACAA 60.744 55.000 0.00 0.00 45.92 3.33
2453 5578 1.153369 GCTCGCCAAGCCTATCACA 60.153 57.895 0.00 0.00 45.92 3.58
2454 5579 3.724494 GCTCGCCAAGCCTATCAC 58.276 61.111 0.00 0.00 45.92 3.06
2464 5589 0.308376 GTTTTTACGTTGGCTCGCCA 59.692 50.000 6.52 6.52 45.63 5.69
2465 5590 0.589708 AGTTTTTACGTTGGCTCGCC 59.410 50.000 0.00 0.00 0.00 5.54
2466 5591 2.723923 GCTAGTTTTTACGTTGGCTCGC 60.724 50.000 0.00 0.00 0.00 5.03
2467 5592 2.159747 GGCTAGTTTTTACGTTGGCTCG 60.160 50.000 0.00 1.70 0.00 5.03
2468 5593 2.809696 TGGCTAGTTTTTACGTTGGCTC 59.190 45.455 0.00 0.00 0.00 4.70
2469 5594 2.812011 CTGGCTAGTTTTTACGTTGGCT 59.188 45.455 0.00 0.00 0.00 4.75
2470 5595 2.551032 ACTGGCTAGTTTTTACGTTGGC 59.449 45.455 0.00 0.00 31.66 4.52
2471 5596 3.187842 GGACTGGCTAGTTTTTACGTTGG 59.812 47.826 3.47 0.00 37.25 3.77
2472 5597 3.187842 GGGACTGGCTAGTTTTTACGTTG 59.812 47.826 3.47 0.00 37.25 4.10
2473 5598 3.181452 TGGGACTGGCTAGTTTTTACGTT 60.181 43.478 3.47 0.00 37.25 3.99
2474 5599 2.369532 TGGGACTGGCTAGTTTTTACGT 59.630 45.455 3.47 0.00 37.25 3.57
2475 5600 3.048337 TGGGACTGGCTAGTTTTTACG 57.952 47.619 3.47 0.00 37.25 3.18
2476 5601 5.123936 CCTATGGGACTGGCTAGTTTTTAC 58.876 45.833 3.47 0.00 37.25 2.01
2477 5602 4.786454 ACCTATGGGACTGGCTAGTTTTTA 59.214 41.667 3.47 0.00 37.25 1.52
2478 5603 3.591977 ACCTATGGGACTGGCTAGTTTTT 59.408 43.478 3.47 0.00 37.25 1.94
2479 5604 3.190439 ACCTATGGGACTGGCTAGTTTT 58.810 45.455 3.47 0.00 37.25 2.43
2480 5605 2.846950 ACCTATGGGACTGGCTAGTTT 58.153 47.619 3.47 0.00 37.25 2.66
2481 5606 2.570386 ACCTATGGGACTGGCTAGTT 57.430 50.000 3.47 0.00 37.25 2.24
2482 5607 3.142217 TCATACCTATGGGACTGGCTAGT 59.858 47.826 0.69 0.69 35.65 2.57
2483 5608 3.779444 TCATACCTATGGGACTGGCTAG 58.221 50.000 0.25 0.00 34.50 3.42
2484 5609 3.915346 TCATACCTATGGGACTGGCTA 57.085 47.619 0.25 0.00 34.50 3.93
2485 5610 2.795291 TCATACCTATGGGACTGGCT 57.205 50.000 0.25 0.00 34.50 4.75
2486 5611 3.477530 GTTTCATACCTATGGGACTGGC 58.522 50.000 0.25 0.00 34.50 4.85
2487 5612 3.181443 GGGTTTCATACCTATGGGACTGG 60.181 52.174 0.25 0.00 46.86 4.00
2488 5613 3.458118 TGGGTTTCATACCTATGGGACTG 59.542 47.826 0.25 0.00 46.86 3.51
2489 5614 3.743132 TGGGTTTCATACCTATGGGACT 58.257 45.455 0.25 0.00 46.86 3.85
2490 5615 4.724279 ATGGGTTTCATACCTATGGGAC 57.276 45.455 0.25 0.00 45.57 4.46
2491 5616 5.194740 TCAAATGGGTTTCATACCTATGGGA 59.805 40.000 0.25 0.00 46.51 4.37
2492 5617 5.454062 TCAAATGGGTTTCATACCTATGGG 58.546 41.667 0.00 0.00 46.51 4.00
2493 5618 5.010012 GCTCAAATGGGTTTCATACCTATGG 59.990 44.000 0.00 0.00 46.51 2.74
2494 5619 5.277974 CGCTCAAATGGGTTTCATACCTATG 60.278 44.000 0.00 0.00 46.51 2.23
2496 5621 4.080807 TCGCTCAAATGGGTTTCATACCTA 60.081 41.667 0.00 0.00 46.86 3.08
2497 5622 3.016736 CGCTCAAATGGGTTTCATACCT 58.983 45.455 0.00 0.00 46.86 3.08
2498 5623 3.013921 TCGCTCAAATGGGTTTCATACC 58.986 45.455 0.00 0.00 46.99 2.73
2499 5624 3.938963 TCTCGCTCAAATGGGTTTCATAC 59.061 43.478 0.00 0.00 34.44 2.39
2500 5625 4.214986 TCTCGCTCAAATGGGTTTCATA 57.785 40.909 0.00 0.00 34.44 2.15
2501 5626 3.071874 TCTCGCTCAAATGGGTTTCAT 57.928 42.857 0.00 0.00 37.79 2.57
2502 5627 2.559698 TCTCGCTCAAATGGGTTTCA 57.440 45.000 0.00 0.00 0.00 2.69
2503 5628 4.636206 ACTATTCTCGCTCAAATGGGTTTC 59.364 41.667 0.00 0.00 0.00 2.78
2504 5629 4.589908 ACTATTCTCGCTCAAATGGGTTT 58.410 39.130 0.00 0.00 0.00 3.27
2505 5630 4.222124 ACTATTCTCGCTCAAATGGGTT 57.778 40.909 0.00 0.00 0.00 4.11
2506 5631 3.914426 ACTATTCTCGCTCAAATGGGT 57.086 42.857 0.00 0.00 0.00 4.51
2507 5632 4.950050 AGTACTATTCTCGCTCAAATGGG 58.050 43.478 0.00 0.00 0.00 4.00
2508 5633 6.016192 TCCTAGTACTATTCTCGCTCAAATGG 60.016 42.308 2.33 0.00 0.00 3.16
2509 5634 6.971602 TCCTAGTACTATTCTCGCTCAAATG 58.028 40.000 2.33 0.00 0.00 2.32
2510 5635 7.309499 CCATCCTAGTACTATTCTCGCTCAAAT 60.309 40.741 2.33 0.00 0.00 2.32
2511 5636 6.016192 CCATCCTAGTACTATTCTCGCTCAAA 60.016 42.308 2.33 0.00 0.00 2.69
2512 5637 5.473846 CCATCCTAGTACTATTCTCGCTCAA 59.526 44.000 2.33 0.00 0.00 3.02
2513 5638 5.004448 CCATCCTAGTACTATTCTCGCTCA 58.996 45.833 2.33 0.00 0.00 4.26
2514 5639 4.396790 CCCATCCTAGTACTATTCTCGCTC 59.603 50.000 2.33 0.00 0.00 5.03
2515 5640 4.202588 ACCCATCCTAGTACTATTCTCGCT 60.203 45.833 2.33 0.00 0.00 4.93
2516 5641 4.080687 ACCCATCCTAGTACTATTCTCGC 58.919 47.826 2.33 0.00 0.00 5.03
2517 5642 5.181622 GTCACCCATCCTAGTACTATTCTCG 59.818 48.000 2.33 0.00 0.00 4.04
2518 5643 5.477637 GGTCACCCATCCTAGTACTATTCTC 59.522 48.000 2.33 0.00 0.00 2.87
2519 5644 5.136392 AGGTCACCCATCCTAGTACTATTCT 59.864 44.000 2.33 0.00 31.66 2.40
2520 5645 5.395611 AGGTCACCCATCCTAGTACTATTC 58.604 45.833 2.33 0.00 31.66 1.75
2521 5646 5.395611 GAGGTCACCCATCCTAGTACTATT 58.604 45.833 2.33 0.00 33.83 1.73
2522 5647 4.202695 GGAGGTCACCCATCCTAGTACTAT 60.203 50.000 2.33 0.00 33.83 2.12
2523 5648 3.139770 GGAGGTCACCCATCCTAGTACTA 59.860 52.174 1.89 1.89 33.83 1.82
2524 5649 2.091222 GGAGGTCACCCATCCTAGTACT 60.091 54.545 0.00 0.00 33.83 2.73
2525 5650 2.091222 AGGAGGTCACCCATCCTAGTAC 60.091 54.545 2.60 0.00 36.91 2.73
2526 5651 2.224077 AGGAGGTCACCCATCCTAGTA 58.776 52.381 2.60 0.00 36.91 1.82
2527 5652 1.019650 AGGAGGTCACCCATCCTAGT 58.980 55.000 2.60 0.00 36.91 2.57
2528 5653 2.491825 CCTAGGAGGTCACCCATCCTAG 60.492 59.091 24.06 24.06 46.05 3.02
2529 5654 1.503784 CCTAGGAGGTCACCCATCCTA 59.496 57.143 10.74 10.74 38.53 2.94
2530 5655 0.266152 CCTAGGAGGTCACCCATCCT 59.734 60.000 9.58 9.58 39.90 3.24
2531 5656 0.264955 TCCTAGGAGGTCACCCATCC 59.735 60.000 7.62 0.00 36.53 3.51
2532 5657 2.043227 CTTCCTAGGAGGTCACCCATC 58.957 57.143 12.26 0.00 36.53 3.51
2533 5658 1.366435 ACTTCCTAGGAGGTCACCCAT 59.634 52.381 20.38 0.00 36.53 4.00
2534 5659 0.790993 ACTTCCTAGGAGGTCACCCA 59.209 55.000 20.38 0.00 36.53 4.51
2535 5660 1.487300 GACTTCCTAGGAGGTCACCC 58.513 60.000 36.64 18.70 46.32 4.61
2545 5670 8.945486 GAAACCCTTTCACGAGGACTTCCTAG 62.945 50.000 0.00 0.27 42.02 3.02
2546 5671 7.251005 GAAACCCTTTCACGAGGACTTCCTA 62.251 48.000 0.00 0.00 42.02 2.94
2547 5672 6.553615 GAAACCCTTTCACGAGGACTTCCT 62.554 50.000 0.00 0.00 43.41 3.36
2548 5673 0.685660 ACCCTTTCACGAGGACTTCC 59.314 55.000 0.00 0.00 39.25 3.46
2549 5674 2.545537 AACCCTTTCACGAGGACTTC 57.454 50.000 0.00 0.00 39.25 3.01
2550 5675 2.171870 TGAAACCCTTTCACGAGGACTT 59.828 45.455 0.00 0.00 44.21 3.01
2551 5676 1.766496 TGAAACCCTTTCACGAGGACT 59.234 47.619 0.00 0.00 44.21 3.85
2552 5677 2.249844 TGAAACCCTTTCACGAGGAC 57.750 50.000 0.00 0.00 44.21 3.85
2560 5685 6.890268 ACAACCCTTAGATATGAAACCCTTTC 59.110 38.462 0.00 0.00 40.08 2.62
2561 5686 6.663523 CACAACCCTTAGATATGAAACCCTTT 59.336 38.462 0.00 0.00 0.00 3.11
2562 5687 6.011981 TCACAACCCTTAGATATGAAACCCTT 60.012 38.462 0.00 0.00 0.00 3.95
2563 5688 5.491078 TCACAACCCTTAGATATGAAACCCT 59.509 40.000 0.00 0.00 0.00 4.34
2564 5689 5.751586 TCACAACCCTTAGATATGAAACCC 58.248 41.667 0.00 0.00 0.00 4.11
2565 5690 7.661847 CCTATCACAACCCTTAGATATGAAACC 59.338 40.741 0.00 0.00 0.00 3.27
2566 5691 7.173390 GCCTATCACAACCCTTAGATATGAAAC 59.827 40.741 0.00 0.00 0.00 2.78
2567 5692 7.072454 AGCCTATCACAACCCTTAGATATGAAA 59.928 37.037 0.00 0.00 0.00 2.69
2568 5693 6.558775 AGCCTATCACAACCCTTAGATATGAA 59.441 38.462 0.00 0.00 0.00 2.57
2569 5694 6.084738 AGCCTATCACAACCCTTAGATATGA 58.915 40.000 0.00 0.00 0.00 2.15
2570 5695 6.365970 AGCCTATCACAACCCTTAGATATG 57.634 41.667 0.00 0.00 0.00 1.78
2571 5696 6.240002 CCAAGCCTATCACAACCCTTAGATAT 60.240 42.308 0.00 0.00 0.00 1.63
2572 5697 5.071788 CCAAGCCTATCACAACCCTTAGATA 59.928 44.000 0.00 0.00 0.00 1.98
2573 5698 4.141390 CCAAGCCTATCACAACCCTTAGAT 60.141 45.833 0.00 0.00 0.00 1.98
2574 5699 3.199946 CCAAGCCTATCACAACCCTTAGA 59.800 47.826 0.00 0.00 0.00 2.10
2575 5700 3.545703 CCAAGCCTATCACAACCCTTAG 58.454 50.000 0.00 0.00 0.00 2.18
2576 5701 2.356741 GCCAAGCCTATCACAACCCTTA 60.357 50.000 0.00 0.00 0.00 2.69
2577 5702 1.616994 GCCAAGCCTATCACAACCCTT 60.617 52.381 0.00 0.00 0.00 3.95
2578 5703 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.00 0.00 4.34
2579 5704 1.376609 CGCCAAGCCTATCACAACCC 61.377 60.000 0.00 0.00 0.00 4.11
2580 5705 0.392461 TCGCCAAGCCTATCACAACC 60.392 55.000 0.00 0.00 0.00 3.77
2581 5706 1.009829 CTCGCCAAGCCTATCACAAC 58.990 55.000 0.00 0.00 0.00 3.32
2582 5707 0.744414 GCTCGCCAAGCCTATCACAA 60.744 55.000 0.00 0.00 45.92 3.33
2583 5708 1.153369 GCTCGCCAAGCCTATCACA 60.153 57.895 0.00 0.00 45.92 3.58
2584 5709 3.724494 GCTCGCCAAGCCTATCAC 58.276 61.111 0.00 0.00 45.92 3.06
2594 5719 0.308376 GTTTTTACGTTGGCTCGCCA 59.692 50.000 6.52 6.52 45.63 5.69
2595 5720 0.589708 AGTTTTTACGTTGGCTCGCC 59.410 50.000 0.00 0.00 0.00 5.54
2596 5721 2.723923 GCTAGTTTTTACGTTGGCTCGC 60.724 50.000 0.00 0.00 0.00 5.03
2597 5722 2.159747 GGCTAGTTTTTACGTTGGCTCG 60.160 50.000 0.00 1.70 0.00 5.03
2598 5723 2.809696 TGGCTAGTTTTTACGTTGGCTC 59.190 45.455 0.00 0.00 0.00 4.70
2599 5724 2.812011 CTGGCTAGTTTTTACGTTGGCT 59.188 45.455 0.00 0.00 0.00 4.75
2600 5725 2.551032 ACTGGCTAGTTTTTACGTTGGC 59.449 45.455 0.00 0.00 31.66 4.52
2601 5726 4.062991 AGACTGGCTAGTTTTTACGTTGG 58.937 43.478 3.47 0.00 37.25 3.77
2602 5727 5.668558 AAGACTGGCTAGTTTTTACGTTG 57.331 39.130 3.47 0.00 37.25 4.10
2603 5728 6.459161 CCAAAAGACTGGCTAGTTTTTACGTT 60.459 38.462 17.28 1.45 39.50 3.99
2604 5729 5.008316 CCAAAAGACTGGCTAGTTTTTACGT 59.992 40.000 17.28 1.78 39.50 3.57
2605 5730 5.449304 CCAAAAGACTGGCTAGTTTTTACG 58.551 41.667 17.28 12.06 39.50 3.18
2606 5731 5.301045 ACCCAAAAGACTGGCTAGTTTTTAC 59.699 40.000 17.28 0.00 39.50 2.01
2607 5732 5.451354 ACCCAAAAGACTGGCTAGTTTTTA 58.549 37.500 17.28 0.00 39.50 1.52
2608 5733 4.286707 ACCCAAAAGACTGGCTAGTTTTT 58.713 39.130 12.22 12.22 41.44 1.94
2609 5734 3.910989 ACCCAAAAGACTGGCTAGTTTT 58.089 40.909 3.47 1.40 37.25 2.43
2610 5735 3.595190 ACCCAAAAGACTGGCTAGTTT 57.405 42.857 3.47 0.00 37.25 2.66
2611 5736 3.009143 CCTACCCAAAAGACTGGCTAGTT 59.991 47.826 3.47 0.00 37.25 2.24
2612 5737 2.572104 CCTACCCAAAAGACTGGCTAGT 59.428 50.000 0.69 0.69 40.66 2.57
2613 5738 2.838202 TCCTACCCAAAAGACTGGCTAG 59.162 50.000 0.00 0.00 34.88 3.42
2614 5739 2.910544 TCCTACCCAAAAGACTGGCTA 58.089 47.619 0.00 0.00 34.88 3.93
2615 5740 1.742308 TCCTACCCAAAAGACTGGCT 58.258 50.000 0.00 0.00 34.88 4.75
2616 5741 2.557056 GTTTCCTACCCAAAAGACTGGC 59.443 50.000 0.00 0.00 34.88 4.85
2617 5742 3.154710 GGTTTCCTACCCAAAAGACTGG 58.845 50.000 0.00 0.00 41.43 4.00
2638 5763 2.431057 AGTACTACTCTCGCCCAAATGG 59.569 50.000 0.00 0.00 37.09 3.16
2639 5764 3.802948 AGTACTACTCTCGCCCAAATG 57.197 47.619 0.00 0.00 0.00 2.32
2640 5765 3.890147 CCTAGTACTACTCTCGCCCAAAT 59.110 47.826 0.00 0.00 0.00 2.32
2641 5766 3.054139 TCCTAGTACTACTCTCGCCCAAA 60.054 47.826 0.00 0.00 0.00 3.28
2642 5767 2.507058 TCCTAGTACTACTCTCGCCCAA 59.493 50.000 0.00 0.00 0.00 4.12
2643 5768 2.121948 TCCTAGTACTACTCTCGCCCA 58.878 52.381 0.00 0.00 0.00 5.36
2644 5769 2.926778 TCCTAGTACTACTCTCGCCC 57.073 55.000 0.00 0.00 0.00 6.13
2645 5770 3.075884 CCATCCTAGTACTACTCTCGCC 58.924 54.545 0.00 0.00 0.00 5.54
2646 5771 3.075884 CCCATCCTAGTACTACTCTCGC 58.924 54.545 0.00 0.00 0.00 5.03
2647 5772 4.066490 CACCCATCCTAGTACTACTCTCG 58.934 52.174 0.00 0.00 0.00 4.04
2648 5773 5.065235 GTCACCCATCCTAGTACTACTCTC 58.935 50.000 0.00 0.00 0.00 3.20
2649 5774 4.141205 GGTCACCCATCCTAGTACTACTCT 60.141 50.000 0.00 0.00 0.00 3.24
2650 5775 4.141205 AGGTCACCCATCCTAGTACTACTC 60.141 50.000 0.00 0.00 31.66 2.59
2651 5776 3.792684 AGGTCACCCATCCTAGTACTACT 59.207 47.826 0.00 0.00 31.66 2.57
2652 5777 4.143543 GAGGTCACCCATCCTAGTACTAC 58.856 52.174 0.00 0.00 33.83 2.73
2653 5778 3.139770 GGAGGTCACCCATCCTAGTACTA 59.860 52.174 1.89 1.89 33.83 1.82
2654 5779 2.091222 GGAGGTCACCCATCCTAGTACT 60.091 54.545 0.00 0.00 33.83 2.73
2655 5780 2.091222 AGGAGGTCACCCATCCTAGTAC 60.091 54.545 2.60 0.00 36.91 2.73
2656 5781 2.091278 CAGGAGGTCACCCATCCTAGTA 60.091 54.545 4.27 0.00 36.69 1.82
2657 5782 1.019650 AGGAGGTCACCCATCCTAGT 58.980 55.000 2.60 0.00 36.91 2.57
2658 5783 1.418334 CAGGAGGTCACCCATCCTAG 58.582 60.000 4.27 0.00 36.69 3.02
2659 5784 0.031111 CCAGGAGGTCACCCATCCTA 60.031 60.000 4.27 0.00 36.69 2.94
2660 5785 1.307343 CCAGGAGGTCACCCATCCT 60.307 63.158 0.00 0.00 38.30 3.24
2661 5786 2.378634 CCCAGGAGGTCACCCATCC 61.379 68.421 0.00 0.00 0.00 3.51
2662 5787 0.914417 TTCCCAGGAGGTCACCCATC 60.914 60.000 0.00 0.00 36.75 3.51
2663 5788 0.916358 CTTCCCAGGAGGTCACCCAT 60.916 60.000 0.00 0.00 36.75 4.00
2664 5789 1.538876 CTTCCCAGGAGGTCACCCA 60.539 63.158 0.00 0.00 36.75 4.51
2665 5790 1.539124 ACTTCCCAGGAGGTCACCC 60.539 63.158 0.00 0.00 36.75 4.61
2666 5791 1.984020 GACTTCCCAGGAGGTCACC 59.016 63.158 20.66 0.00 46.32 4.02
2669 5794 1.324005 CGAGGACTTCCCAGGAGGTC 61.324 65.000 18.15 18.15 46.33 3.85
2670 5795 1.305381 CGAGGACTTCCCAGGAGGT 60.305 63.158 0.31 0.31 37.15 3.85
2671 5796 1.305381 ACGAGGACTTCCCAGGAGG 60.305 63.158 0.00 0.00 37.41 4.30
2672 5797 0.612174 TCACGAGGACTTCCCAGGAG 60.612 60.000 0.00 0.00 37.41 3.69
2673 5798 0.178944 TTCACGAGGACTTCCCAGGA 60.179 55.000 0.00 0.00 37.41 3.86
2674 5799 0.685097 TTTCACGAGGACTTCCCAGG 59.315 55.000 0.00 0.00 37.41 4.45
2675 5800 1.338200 CCTTTCACGAGGACTTCCCAG 60.338 57.143 0.00 0.00 39.25 4.45
2676 5801 0.685097 CCTTTCACGAGGACTTCCCA 59.315 55.000 0.00 0.00 39.25 4.37
2677 5802 0.036294 CCCTTTCACGAGGACTTCCC 60.036 60.000 0.00 0.00 39.25 3.97
2678 5803 0.685660 ACCCTTTCACGAGGACTTCC 59.314 55.000 0.00 0.00 39.25 3.46
2679 5804 2.545537 AACCCTTTCACGAGGACTTC 57.454 50.000 0.00 0.00 39.25 3.01
2680 5805 2.171870 TGAAACCCTTTCACGAGGACTT 59.828 45.455 0.00 0.00 44.21 3.01
2681 5806 1.766496 TGAAACCCTTTCACGAGGACT 59.234 47.619 0.00 0.00 44.21 3.85
2682 5807 2.249844 TGAAACCCTTTCACGAGGAC 57.750 50.000 0.00 0.00 44.21 3.85
2690 5815 6.231951 GGTAGGCTAGATATGAAACCCTTTC 58.768 44.000 0.00 0.00 40.08 2.62
2691 5816 5.073280 GGGTAGGCTAGATATGAAACCCTTT 59.927 44.000 8.73 0.00 41.75 3.11
2692 5817 4.597940 GGGTAGGCTAGATATGAAACCCTT 59.402 45.833 8.73 0.00 41.75 3.95
2693 5818 4.168883 GGGTAGGCTAGATATGAAACCCT 58.831 47.826 8.73 0.00 41.75 4.34
2694 5819 3.263681 GGGGTAGGCTAGATATGAAACCC 59.736 52.174 7.65 7.65 43.82 4.11
2695 5820 3.908103 TGGGGTAGGCTAGATATGAAACC 59.092 47.826 0.00 0.00 0.00 3.27
2696 5821 5.071923 AGTTGGGGTAGGCTAGATATGAAAC 59.928 44.000 0.00 0.00 0.00 2.78
2697 5822 5.224441 AGTTGGGGTAGGCTAGATATGAAA 58.776 41.667 0.00 0.00 0.00 2.69
2698 5823 4.827789 AGTTGGGGTAGGCTAGATATGAA 58.172 43.478 0.00 0.00 0.00 2.57
2699 5824 4.487282 AGTTGGGGTAGGCTAGATATGA 57.513 45.455 0.00 0.00 0.00 2.15
2700 5825 4.348168 ACAAGTTGGGGTAGGCTAGATATG 59.652 45.833 7.96 0.00 0.00 1.78
2701 5826 4.567857 ACAAGTTGGGGTAGGCTAGATAT 58.432 43.478 7.96 0.00 0.00 1.63
2702 5827 4.003584 ACAAGTTGGGGTAGGCTAGATA 57.996 45.455 7.96 0.00 0.00 1.98
2703 5828 2.846950 ACAAGTTGGGGTAGGCTAGAT 58.153 47.619 7.96 0.00 0.00 1.98
2704 5829 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2705 5830 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2706 5831 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2707 5832 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2716 5841 5.213891 AGCCTTTTATCCCAAACAAGTTG 57.786 39.130 0.00 0.00 36.94 3.16
2717 5842 5.508994 CGAAGCCTTTTATCCCAAACAAGTT 60.509 40.000 0.00 0.00 0.00 2.66
2718 5843 4.022329 CGAAGCCTTTTATCCCAAACAAGT 60.022 41.667 0.00 0.00 0.00 3.16
2719 5844 4.022329 ACGAAGCCTTTTATCCCAAACAAG 60.022 41.667 0.00 0.00 0.00 3.16
2720 5845 3.892588 ACGAAGCCTTTTATCCCAAACAA 59.107 39.130 0.00 0.00 0.00 2.83
2721 5846 3.492337 ACGAAGCCTTTTATCCCAAACA 58.508 40.909 0.00 0.00 0.00 2.83
2722 5847 5.182570 ACTTACGAAGCCTTTTATCCCAAAC 59.817 40.000 0.00 0.00 0.00 2.93
2723 5848 5.318630 ACTTACGAAGCCTTTTATCCCAAA 58.681 37.500 0.00 0.00 0.00 3.28
2724 5849 4.913784 ACTTACGAAGCCTTTTATCCCAA 58.086 39.130 0.00 0.00 0.00 4.12
2725 5850 4.563140 ACTTACGAAGCCTTTTATCCCA 57.437 40.909 0.00 0.00 0.00 4.37
2726 5851 6.111382 ACTTACTTACGAAGCCTTTTATCCC 58.889 40.000 0.00 0.00 0.00 3.85
2727 5852 8.707938 TTACTTACTTACGAAGCCTTTTATCC 57.292 34.615 0.00 0.00 0.00 2.59
2728 5853 9.363763 ACTTACTTACTTACGAAGCCTTTTATC 57.636 33.333 0.00 0.00 0.00 1.75
2731 5856 9.363763 GATACTTACTTACTTACGAAGCCTTTT 57.636 33.333 0.00 0.00 0.00 2.27
2732 5857 7.699812 CGATACTTACTTACTTACGAAGCCTTT 59.300 37.037 0.00 0.00 0.00 3.11
2733 5858 7.066284 TCGATACTTACTTACTTACGAAGCCTT 59.934 37.037 0.00 0.00 0.00 4.35
2734 5859 6.540189 TCGATACTTACTTACTTACGAAGCCT 59.460 38.462 0.00 0.00 0.00 4.58
2735 5860 6.719365 TCGATACTTACTTACTTACGAAGCC 58.281 40.000 0.00 0.00 0.00 4.35
2736 5861 8.606727 TTTCGATACTTACTTACTTACGAAGC 57.393 34.615 0.00 0.00 38.19 3.86
2737 5862 9.766277 ACTTTCGATACTTACTTACTTACGAAG 57.234 33.333 0.00 0.00 38.19 3.79
2743 5868 9.201127 GACCAAACTTTCGATACTTACTTACTT 57.799 33.333 0.00 0.00 0.00 2.24
2744 5869 7.816513 GGACCAAACTTTCGATACTTACTTACT 59.183 37.037 0.00 0.00 0.00 2.24
2745 5870 7.816513 AGGACCAAACTTTCGATACTTACTTAC 59.183 37.037 0.00 0.00 0.00 2.34
2746 5871 7.899973 AGGACCAAACTTTCGATACTTACTTA 58.100 34.615 0.00 0.00 0.00 2.24
2747 5872 6.766429 AGGACCAAACTTTCGATACTTACTT 58.234 36.000 0.00 0.00 0.00 2.24
2748 5873 6.210984 AGAGGACCAAACTTTCGATACTTACT 59.789 38.462 0.00 0.00 0.00 2.24
2749 5874 6.310711 CAGAGGACCAAACTTTCGATACTTAC 59.689 42.308 0.00 0.00 0.00 2.34
2750 5875 6.209986 TCAGAGGACCAAACTTTCGATACTTA 59.790 38.462 0.00 0.00 0.00 2.24
2751 5876 5.011738 TCAGAGGACCAAACTTTCGATACTT 59.988 40.000 0.00 0.00 0.00 2.24
2752 5877 4.527038 TCAGAGGACCAAACTTTCGATACT 59.473 41.667 0.00 0.00 0.00 2.12
2753 5878 4.817517 TCAGAGGACCAAACTTTCGATAC 58.182 43.478 0.00 0.00 0.00 2.24
2754 5879 4.527038 ACTCAGAGGACCAAACTTTCGATA 59.473 41.667 1.53 0.00 0.00 2.92
2755 5880 3.325135 ACTCAGAGGACCAAACTTTCGAT 59.675 43.478 1.53 0.00 0.00 3.59
2756 5881 2.698797 ACTCAGAGGACCAAACTTTCGA 59.301 45.455 1.53 0.00 0.00 3.71
3190 6337 6.036626 ACCGCAAACTTTACAAAATCCAAAAG 59.963 34.615 0.00 0.00 35.54 2.27
3449 6614 7.514784 TGAATATCCTCCTGCATACAAAATG 57.485 36.000 0.00 0.00 0.00 2.32
3744 6917 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
3767 6940 1.001406 TCTGACACACACACACACACA 59.999 47.619 0.00 0.00 0.00 3.72
3768 6941 1.720805 TCTGACACACACACACACAC 58.279 50.000 0.00 0.00 0.00 3.82
4227 7971 3.420893 AGAGAGAACAGAGAGGACAGTG 58.579 50.000 0.00 0.00 0.00 3.66
4863 8643 5.190528 AGTCTTCTATTTCTTGGATCAGGCA 59.809 40.000 0.00 0.00 0.00 4.75
5466 9248 0.395173 AAGGTGAAGGCCGTGTTGTT 60.395 50.000 0.00 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.