Multiple sequence alignment - TraesCS2A01G394800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G394800 chr2A 100.000 2487 0 0 1 2487 645909401 645911887 0.000000e+00 4593.0
1 TraesCS2A01G394800 chr2A 95.745 235 9 1 1 235 52016724 52016957 6.490000e-101 377.0
2 TraesCS2A01G394800 chr2A 91.964 112 8 1 2319 2429 443394015 443393904 3.310000e-34 156.0
3 TraesCS2A01G394800 chr2A 82.209 163 25 3 943 1103 385648339 385648499 1.200000e-28 137.0
4 TraesCS2A01G394800 chr6D 95.435 1183 46 2 276 1458 401339413 401338239 0.000000e+00 1879.0
5 TraesCS2A01G394800 chr6D 94.779 747 37 1 1743 2487 401338242 401337496 0.000000e+00 1162.0
6 TraesCS2A01G394800 chr4B 93.279 1235 69 5 233 1458 587428297 587429526 0.000000e+00 1808.0
7 TraesCS2A01G394800 chr4B 95.034 745 37 0 1743 2487 587429523 587430267 0.000000e+00 1171.0
8 TraesCS2A01G394800 chr7B 93.655 1182 70 3 277 1457 319265402 319266579 0.000000e+00 1762.0
9 TraesCS2A01G394800 chr7B 95.722 748 28 3 1743 2487 491904241 491903495 0.000000e+00 1201.0
10 TraesCS2A01G394800 chr7B 92.369 747 39 5 1743 2487 319266577 319267307 0.000000e+00 1048.0
11 TraesCS2A01G394800 chr7B 96.711 456 15 0 1003 1458 491904693 491904238 0.000000e+00 760.0
12 TraesCS2A01G394800 chr7B 93.767 369 14 1 567 926 491905062 491904694 1.680000e-151 545.0
13 TraesCS2A01G394800 chr5B 86.423 1230 141 14 252 1458 40031925 40033151 0.000000e+00 1323.0
14 TraesCS2A01G394800 chr5B 87.600 750 81 11 1743 2487 40033148 40033890 0.000000e+00 859.0
15 TraesCS2A01G394800 chr5B 89.222 167 15 3 2319 2484 240822501 240822665 3.240000e-49 206.0
16 TraesCS2A01G394800 chr1A 97.619 294 7 0 1454 1747 34248057 34247764 2.850000e-139 505.0
17 TraesCS2A01G394800 chr1A 96.233 292 11 0 1454 1745 50262468 50262177 1.730000e-131 479.0
18 TraesCS2A01G394800 chr5A 98.252 286 5 0 1458 1743 132095966 132096251 3.690000e-138 501.0
19 TraesCS2A01G394800 chr5A 93.814 291 18 0 1456 1746 644876157 644875867 2.940000e-119 438.0
20 TraesCS2A01G394800 chr5A 95.726 234 8 1 1 234 616867858 616867627 2.340000e-100 375.0
21 TraesCS2A01G394800 chr5A 91.949 236 17 2 1 235 35085439 35085205 1.840000e-86 329.0
22 TraesCS2A01G394800 chr5A 89.787 235 23 1 1 234 686766253 686766487 1.450000e-77 300.0
23 TraesCS2A01G394800 chr3A 97.232 289 7 1 1456 1743 519214188 519213900 2.870000e-134 488.0
24 TraesCS2A01G394800 chr3A 92.593 297 21 1 1455 1751 67438972 67439267 2.290000e-115 425.0
25 TraesCS2A01G394800 chr3A 95.279 233 11 0 1 233 198177425 198177657 1.090000e-98 370.0
26 TraesCS2A01G394800 chr3A 88.889 171 17 2 2319 2487 354208209 354208039 2.510000e-50 209.0
27 TraesCS2A01G394800 chr3A 83.916 143 21 2 2131 2271 416633124 416633266 4.310000e-28 135.0
28 TraesCS2A01G394800 chr3A 97.674 43 1 0 1416 1458 163064983 163064941 9.540000e-10 75.0
29 TraesCS2A01G394800 chr6A 96.194 289 10 1 1457 1745 248272362 248272649 2.900000e-129 472.0
30 TraesCS2A01G394800 chr6A 95.533 291 13 0 1457 1747 27519689 27519399 1.350000e-127 466.0
31 TraesCS2A01G394800 chrUn 92.230 296 23 0 1451 1746 11868471 11868766 1.060000e-113 420.0
32 TraesCS2A01G394800 chr1B 96.137 233 9 0 1 233 260828386 260828154 5.020000e-102 381.0
33 TraesCS2A01G394800 chr1B 82.447 188 24 7 2148 2334 379801418 379801597 3.310000e-34 156.0
34 TraesCS2A01G394800 chr3D 92.405 237 17 1 1 236 505946470 505946234 1.100000e-88 337.0
35 TraesCS2A01G394800 chr4A 91.736 242 17 3 1 240 601206608 601206368 1.430000e-87 333.0
36 TraesCS2A01G394800 chr4A 90.164 244 22 2 2 244 139125402 139125160 1.440000e-82 316.0
37 TraesCS2A01G394800 chr4A 88.208 212 15 7 1252 1453 439044626 439044415 6.870000e-61 244.0
38 TraesCS2A01G394800 chr4A 88.889 171 17 2 2319 2487 283595734 283595564 2.510000e-50 209.0
39 TraesCS2A01G394800 chr4A 97.674 43 1 0 1416 1458 20904075 20904033 9.540000e-10 75.0
40 TraesCS2A01G394800 chr3B 80.976 205 31 6 2131 2334 68222866 68223063 3.310000e-34 156.0
41 TraesCS2A01G394800 chr3B 81.188 202 30 6 2134 2334 68223693 68223499 3.310000e-34 156.0
42 TraesCS2A01G394800 chr7A 93.443 61 4 0 1139 1199 291028381 291028321 9.470000e-15 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G394800 chr2A 645909401 645911887 2486 False 4593.000000 4593 100.0000 1 2487 1 chr2A.!!$F3 2486
1 TraesCS2A01G394800 chr6D 401337496 401339413 1917 True 1520.500000 1879 95.1070 276 2487 2 chr6D.!!$R1 2211
2 TraesCS2A01G394800 chr4B 587428297 587430267 1970 False 1489.500000 1808 94.1565 233 2487 2 chr4B.!!$F1 2254
3 TraesCS2A01G394800 chr7B 319265402 319267307 1905 False 1405.000000 1762 93.0120 277 2487 2 chr7B.!!$F1 2210
4 TraesCS2A01G394800 chr7B 491903495 491905062 1567 True 835.333333 1201 95.4000 567 2487 3 chr7B.!!$R1 1920
5 TraesCS2A01G394800 chr5B 40031925 40033890 1965 False 1091.000000 1323 87.0115 252 2487 2 chr5B.!!$F2 2235

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
25 26 0.037326 GAGTGGTTGGATGCAGACGA 60.037 55.0 0.0 0.0 0.0 4.2 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1723 1762 0.035056 AGGGCTCATTCGGTTTGGAG 60.035 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.933287 TGGCGGGAGTGGTTGGAT 60.933 61.111 0.00 0.00 0.00 3.41
18 19 2.438434 GGCGGGAGTGGTTGGATG 60.438 66.667 0.00 0.00 0.00 3.51
19 20 3.134127 GCGGGAGTGGTTGGATGC 61.134 66.667 0.00 0.00 0.00 3.91
20 21 2.350895 CGGGAGTGGTTGGATGCA 59.649 61.111 0.00 0.00 0.00 3.96
21 22 1.746615 CGGGAGTGGTTGGATGCAG 60.747 63.158 0.00 0.00 0.00 4.41
22 23 1.685224 GGGAGTGGTTGGATGCAGA 59.315 57.895 0.00 0.00 0.00 4.26
23 24 0.678048 GGGAGTGGTTGGATGCAGAC 60.678 60.000 0.00 0.00 0.00 3.51
24 25 1.021390 GGAGTGGTTGGATGCAGACG 61.021 60.000 0.00 0.00 0.00 4.18
25 26 0.037326 GAGTGGTTGGATGCAGACGA 60.037 55.000 0.00 0.00 0.00 4.20
26 27 0.615331 AGTGGTTGGATGCAGACGAT 59.385 50.000 0.00 0.00 0.00 3.73
27 28 1.003580 AGTGGTTGGATGCAGACGATT 59.996 47.619 0.00 0.00 0.00 3.34
28 29 2.236146 AGTGGTTGGATGCAGACGATTA 59.764 45.455 0.00 0.00 0.00 1.75
29 30 2.609459 GTGGTTGGATGCAGACGATTAG 59.391 50.000 0.00 0.00 0.00 1.73
30 31 2.213499 GGTTGGATGCAGACGATTAGG 58.787 52.381 0.00 0.00 0.00 2.69
31 32 1.599542 GTTGGATGCAGACGATTAGGC 59.400 52.381 0.00 0.00 0.00 3.93
32 33 0.106708 TGGATGCAGACGATTAGGCC 59.893 55.000 0.00 0.00 0.00 5.19
33 34 0.394565 GGATGCAGACGATTAGGCCT 59.605 55.000 11.78 11.78 0.00 5.19
34 35 1.618837 GGATGCAGACGATTAGGCCTA 59.381 52.381 8.91 8.91 0.00 3.93
35 36 2.353208 GGATGCAGACGATTAGGCCTAG 60.353 54.545 13.36 4.13 0.00 3.02
36 37 1.040646 TGCAGACGATTAGGCCTAGG 58.959 55.000 13.36 3.67 0.00 3.02
37 38 1.041437 GCAGACGATTAGGCCTAGGT 58.959 55.000 13.36 12.35 0.00 3.08
38 39 2.236766 GCAGACGATTAGGCCTAGGTA 58.763 52.381 13.36 0.00 0.00 3.08
39 40 2.229302 GCAGACGATTAGGCCTAGGTAG 59.771 54.545 13.36 8.94 0.00 3.18
40 41 2.820787 CAGACGATTAGGCCTAGGTAGG 59.179 54.545 13.36 4.85 46.42 3.18
49 50 3.186345 CCTAGGTAGGCACGACAGA 57.814 57.895 0.00 0.00 36.53 3.41
50 51 1.025812 CCTAGGTAGGCACGACAGAG 58.974 60.000 0.00 0.00 36.53 3.35
51 52 1.025812 CTAGGTAGGCACGACAGAGG 58.974 60.000 0.00 0.00 35.02 3.69
52 53 0.622136 TAGGTAGGCACGACAGAGGA 59.378 55.000 0.00 0.00 35.02 3.71
53 54 0.681564 AGGTAGGCACGACAGAGGAG 60.682 60.000 0.00 0.00 35.02 3.69
54 55 0.680280 GGTAGGCACGACAGAGGAGA 60.680 60.000 0.00 0.00 35.02 3.71
55 56 1.174783 GTAGGCACGACAGAGGAGAA 58.825 55.000 0.00 0.00 33.05 2.87
56 57 1.544691 GTAGGCACGACAGAGGAGAAA 59.455 52.381 0.00 0.00 33.05 2.52
57 58 1.270907 AGGCACGACAGAGGAGAAAT 58.729 50.000 0.00 0.00 0.00 2.17
58 59 1.205893 AGGCACGACAGAGGAGAAATC 59.794 52.381 0.00 0.00 0.00 2.17
59 60 1.272781 GCACGACAGAGGAGAAATCG 58.727 55.000 0.00 0.00 38.71 3.34
60 61 1.402984 GCACGACAGAGGAGAAATCGT 60.403 52.381 0.00 0.00 46.28 3.73
61 62 2.520979 CACGACAGAGGAGAAATCGTC 58.479 52.381 0.00 0.00 43.71 4.20
62 63 1.130749 ACGACAGAGGAGAAATCGTCG 59.869 52.381 8.08 8.08 41.96 5.12
63 64 1.551145 GACAGAGGAGAAATCGTCGC 58.449 55.000 0.00 0.00 0.00 5.19
64 65 0.888619 ACAGAGGAGAAATCGTCGCA 59.111 50.000 0.00 0.00 0.00 5.10
65 66 1.135257 ACAGAGGAGAAATCGTCGCAG 60.135 52.381 0.00 0.00 0.00 5.18
66 67 0.457851 AGAGGAGAAATCGTCGCAGG 59.542 55.000 0.00 0.00 0.00 4.85
67 68 0.173708 GAGGAGAAATCGTCGCAGGT 59.826 55.000 0.00 0.00 0.00 4.00
68 69 0.108615 AGGAGAAATCGTCGCAGGTG 60.109 55.000 0.00 0.00 0.00 4.00
69 70 0.108804 GGAGAAATCGTCGCAGGTGA 60.109 55.000 0.00 0.00 0.00 4.02
70 71 1.272781 GAGAAATCGTCGCAGGTGAG 58.727 55.000 0.00 0.00 0.00 3.51
71 72 0.108615 AGAAATCGTCGCAGGTGAGG 60.109 55.000 0.00 0.00 0.00 3.86
72 73 0.108804 GAAATCGTCGCAGGTGAGGA 60.109 55.000 7.57 7.57 37.20 3.71
73 74 0.108615 AAATCGTCGCAGGTGAGGAG 60.109 55.000 10.46 0.00 36.34 3.69
74 75 1.251527 AATCGTCGCAGGTGAGGAGT 61.252 55.000 10.46 5.69 36.34 3.85
75 76 0.393944 ATCGTCGCAGGTGAGGAGTA 60.394 55.000 10.46 0.00 36.34 2.59
76 77 0.607217 TCGTCGCAGGTGAGGAGTAA 60.607 55.000 1.47 0.00 0.00 2.24
77 78 0.179161 CGTCGCAGGTGAGGAGTAAG 60.179 60.000 0.00 0.00 0.00 2.34
78 79 1.174783 GTCGCAGGTGAGGAGTAAGA 58.825 55.000 0.00 0.00 0.00 2.10
79 80 1.544691 GTCGCAGGTGAGGAGTAAGAA 59.455 52.381 0.00 0.00 0.00 2.52
80 81 1.819288 TCGCAGGTGAGGAGTAAGAAG 59.181 52.381 0.00 0.00 0.00 2.85
81 82 1.134965 CGCAGGTGAGGAGTAAGAAGG 60.135 57.143 0.00 0.00 0.00 3.46
82 83 1.903183 GCAGGTGAGGAGTAAGAAGGT 59.097 52.381 0.00 0.00 0.00 3.50
83 84 2.354203 GCAGGTGAGGAGTAAGAAGGTG 60.354 54.545 0.00 0.00 0.00 4.00
84 85 3.165875 CAGGTGAGGAGTAAGAAGGTGA 58.834 50.000 0.00 0.00 0.00 4.02
85 86 3.578716 CAGGTGAGGAGTAAGAAGGTGAA 59.421 47.826 0.00 0.00 0.00 3.18
86 87 3.579151 AGGTGAGGAGTAAGAAGGTGAAC 59.421 47.826 0.00 0.00 0.00 3.18
87 88 3.323979 GGTGAGGAGTAAGAAGGTGAACA 59.676 47.826 0.00 0.00 0.00 3.18
88 89 4.020128 GGTGAGGAGTAAGAAGGTGAACAT 60.020 45.833 0.00 0.00 0.00 2.71
89 90 4.932200 GTGAGGAGTAAGAAGGTGAACATG 59.068 45.833 0.00 0.00 0.00 3.21
90 91 4.593206 TGAGGAGTAAGAAGGTGAACATGT 59.407 41.667 0.00 0.00 0.00 3.21
91 92 4.899502 AGGAGTAAGAAGGTGAACATGTG 58.100 43.478 0.00 0.00 0.00 3.21
92 93 4.003648 GGAGTAAGAAGGTGAACATGTGG 58.996 47.826 0.00 0.00 0.00 4.17
93 94 4.003648 GAGTAAGAAGGTGAACATGTGGG 58.996 47.826 0.00 0.00 0.00 4.61
94 95 2.292828 AAGAAGGTGAACATGTGGGG 57.707 50.000 0.00 0.00 0.00 4.96
95 96 0.405585 AGAAGGTGAACATGTGGGGG 59.594 55.000 0.00 0.00 0.00 5.40
96 97 1.228862 AAGGTGAACATGTGGGGGC 60.229 57.895 0.00 0.00 0.00 5.80
97 98 3.061848 GGTGAACATGTGGGGGCG 61.062 66.667 0.00 0.00 0.00 6.13
98 99 2.282180 GTGAACATGTGGGGGCGT 60.282 61.111 0.00 0.00 0.00 5.68
99 100 2.282110 TGAACATGTGGGGGCGTG 60.282 61.111 0.00 0.00 0.00 5.34
100 101 3.747976 GAACATGTGGGGGCGTGC 61.748 66.667 0.00 0.00 0.00 5.34
101 102 4.284550 AACATGTGGGGGCGTGCT 62.285 61.111 0.00 0.00 0.00 4.40
102 103 4.722700 ACATGTGGGGGCGTGCTC 62.723 66.667 0.00 0.00 0.00 4.26
106 107 3.712907 GTGGGGGCGTGCTCCTAA 61.713 66.667 11.19 0.00 36.64 2.69
107 108 3.712907 TGGGGGCGTGCTCCTAAC 61.713 66.667 11.19 0.00 36.64 2.34
108 109 4.484872 GGGGGCGTGCTCCTAACC 62.485 72.222 11.19 0.00 36.64 2.85
109 110 3.712907 GGGGCGTGCTCCTAACCA 61.713 66.667 2.75 0.00 32.70 3.67
110 111 2.590092 GGGCGTGCTCCTAACCAT 59.410 61.111 0.00 0.00 0.00 3.55
111 112 1.077716 GGGCGTGCTCCTAACCATT 60.078 57.895 0.00 0.00 0.00 3.16
112 113 1.376609 GGGCGTGCTCCTAACCATTG 61.377 60.000 0.00 0.00 0.00 2.82
113 114 1.376609 GGCGTGCTCCTAACCATTGG 61.377 60.000 0.00 0.00 0.00 3.16
114 115 0.392461 GCGTGCTCCTAACCATTGGA 60.392 55.000 10.37 0.00 0.00 3.53
115 116 1.747206 GCGTGCTCCTAACCATTGGAT 60.747 52.381 10.37 0.00 0.00 3.41
116 117 2.484770 GCGTGCTCCTAACCATTGGATA 60.485 50.000 10.37 0.42 0.00 2.59
117 118 3.807209 GCGTGCTCCTAACCATTGGATAT 60.807 47.826 10.37 0.00 0.00 1.63
118 119 4.389374 CGTGCTCCTAACCATTGGATATT 58.611 43.478 10.37 0.00 0.00 1.28
119 120 4.821805 CGTGCTCCTAACCATTGGATATTT 59.178 41.667 10.37 0.00 0.00 1.40
120 121 5.277974 CGTGCTCCTAACCATTGGATATTTG 60.278 44.000 10.37 0.00 0.00 2.32
121 122 5.827797 GTGCTCCTAACCATTGGATATTTGA 59.172 40.000 10.37 0.00 0.00 2.69
122 123 6.491403 GTGCTCCTAACCATTGGATATTTGAT 59.509 38.462 10.37 0.00 0.00 2.57
123 124 6.491062 TGCTCCTAACCATTGGATATTTGATG 59.509 38.462 10.37 0.00 0.00 3.07
124 125 6.071728 GCTCCTAACCATTGGATATTTGATGG 60.072 42.308 10.37 9.41 43.65 3.51
125 126 5.774690 TCCTAACCATTGGATATTTGATGGC 59.225 40.000 10.37 0.00 42.17 4.40
126 127 5.539574 CCTAACCATTGGATATTTGATGGCA 59.460 40.000 10.37 0.00 42.17 4.92
127 128 5.954153 AACCATTGGATATTTGATGGCAA 57.046 34.783 10.37 0.00 42.17 4.52
129 130 6.310764 ACCATTGGATATTTGATGGCAAAA 57.689 33.333 10.37 0.00 46.19 2.44
130 131 6.719301 ACCATTGGATATTTGATGGCAAAAA 58.281 32.000 10.37 0.00 46.19 1.94
158 159 7.312888 GTGATTGACACGAAGAATTTTTCAG 57.687 36.000 9.19 3.67 39.78 3.02
159 160 6.360681 GTGATTGACACGAAGAATTTTTCAGG 59.639 38.462 9.19 3.02 39.78 3.86
160 161 4.223320 TGACACGAAGAATTTTTCAGGC 57.777 40.909 9.19 3.81 0.00 4.85
161 162 3.629855 TGACACGAAGAATTTTTCAGGCA 59.370 39.130 9.19 6.16 0.00 4.75
162 163 4.278170 TGACACGAAGAATTTTTCAGGCAT 59.722 37.500 9.19 0.00 0.00 4.40
163 164 4.798574 ACACGAAGAATTTTTCAGGCATC 58.201 39.130 9.19 0.00 0.00 3.91
164 165 4.520492 ACACGAAGAATTTTTCAGGCATCT 59.480 37.500 9.19 0.00 0.00 2.90
165 166 5.705441 ACACGAAGAATTTTTCAGGCATCTA 59.295 36.000 9.19 0.00 0.00 1.98
166 167 6.206634 ACACGAAGAATTTTTCAGGCATCTAA 59.793 34.615 9.19 0.00 0.00 2.10
167 168 6.524586 CACGAAGAATTTTTCAGGCATCTAAC 59.475 38.462 9.19 0.00 0.00 2.34
168 169 5.734498 CGAAGAATTTTTCAGGCATCTAACG 59.266 40.000 9.19 0.00 0.00 3.18
169 170 6.575162 AAGAATTTTTCAGGCATCTAACGT 57.425 33.333 0.00 0.00 0.00 3.99
170 171 6.575162 AGAATTTTTCAGGCATCTAACGTT 57.425 33.333 5.88 5.88 0.00 3.99
171 172 7.681939 AGAATTTTTCAGGCATCTAACGTTA 57.318 32.000 7.94 7.94 0.00 3.18
172 173 7.752695 AGAATTTTTCAGGCATCTAACGTTAG 58.247 34.615 26.13 26.13 0.00 2.34
173 174 5.873179 TTTTTCAGGCATCTAACGTTAGG 57.127 39.130 29.87 18.41 0.00 2.69
174 175 4.546829 TTTCAGGCATCTAACGTTAGGT 57.453 40.909 29.87 23.48 0.00 3.08
175 176 3.520290 TCAGGCATCTAACGTTAGGTG 57.480 47.619 34.29 34.29 43.22 4.00
179 180 1.949465 CATCTAACGTTAGGTGCCCC 58.051 55.000 30.01 0.00 35.33 5.80
180 181 1.485066 CATCTAACGTTAGGTGCCCCT 59.515 52.381 30.01 8.23 45.51 4.79
181 182 1.648116 TCTAACGTTAGGTGCCCCTT 58.352 50.000 29.87 0.00 42.66 3.95
182 183 1.980036 TCTAACGTTAGGTGCCCCTTT 59.020 47.619 29.87 0.00 42.66 3.11
183 184 3.172339 TCTAACGTTAGGTGCCCCTTTA 58.828 45.455 29.87 8.43 42.66 1.85
184 185 2.484742 AACGTTAGGTGCCCCTTTAG 57.515 50.000 0.00 0.00 42.66 1.85
185 186 1.355112 ACGTTAGGTGCCCCTTTAGT 58.645 50.000 0.00 0.00 42.66 2.24
186 187 1.701292 ACGTTAGGTGCCCCTTTAGTT 59.299 47.619 0.00 0.00 42.66 2.24
187 188 2.107031 ACGTTAGGTGCCCCTTTAGTTT 59.893 45.455 0.00 0.00 42.66 2.66
188 189 3.327464 ACGTTAGGTGCCCCTTTAGTTTA 59.673 43.478 0.00 0.00 42.66 2.01
189 190 4.019051 ACGTTAGGTGCCCCTTTAGTTTAT 60.019 41.667 0.00 0.00 42.66 1.40
190 191 4.945543 CGTTAGGTGCCCCTTTAGTTTATT 59.054 41.667 0.00 0.00 42.66 1.40
191 192 5.416639 CGTTAGGTGCCCCTTTAGTTTATTT 59.583 40.000 0.00 0.00 42.66 1.40
192 193 6.598850 CGTTAGGTGCCCCTTTAGTTTATTTA 59.401 38.462 0.00 0.00 42.66 1.40
193 194 7.414429 CGTTAGGTGCCCCTTTAGTTTATTTAC 60.414 40.741 0.00 0.00 42.66 2.01
194 195 5.894653 AGGTGCCCCTTTAGTTTATTTACA 58.105 37.500 0.00 0.00 38.13 2.41
195 196 6.316513 AGGTGCCCCTTTAGTTTATTTACAA 58.683 36.000 0.00 0.00 38.13 2.41
196 197 6.957606 AGGTGCCCCTTTAGTTTATTTACAAT 59.042 34.615 0.00 0.00 38.13 2.71
197 198 7.456585 AGGTGCCCCTTTAGTTTATTTACAATT 59.543 33.333 0.00 0.00 38.13 2.32
198 199 8.751242 GGTGCCCCTTTAGTTTATTTACAATTA 58.249 33.333 0.00 0.00 0.00 1.40
219 220 2.817834 GCCCATAGCAACGCACGA 60.818 61.111 0.00 0.00 42.97 4.35
220 221 2.813179 GCCCATAGCAACGCACGAG 61.813 63.158 0.00 0.00 42.97 4.18
221 222 2.703409 CCATAGCAACGCACGAGC 59.297 61.111 0.00 0.00 37.42 5.03
222 223 2.100031 CCATAGCAACGCACGAGCA 61.100 57.895 5.50 0.00 42.27 4.26
223 224 1.431488 CCATAGCAACGCACGAGCAT 61.431 55.000 5.50 0.00 42.27 3.79
224 225 0.374758 CATAGCAACGCACGAGCATT 59.625 50.000 5.50 0.00 42.27 3.56
225 226 1.086696 ATAGCAACGCACGAGCATTT 58.913 45.000 5.50 0.00 42.27 2.32
226 227 1.715993 TAGCAACGCACGAGCATTTA 58.284 45.000 5.50 0.00 42.27 1.40
227 228 0.871722 AGCAACGCACGAGCATTTAA 59.128 45.000 5.50 0.00 42.27 1.52
228 229 0.974836 GCAACGCACGAGCATTTAAC 59.025 50.000 5.50 0.00 42.27 2.01
229 230 1.399727 GCAACGCACGAGCATTTAACT 60.400 47.619 5.50 0.00 42.27 2.24
230 231 2.159761 GCAACGCACGAGCATTTAACTA 60.160 45.455 5.50 0.00 42.27 2.24
231 232 3.659735 CAACGCACGAGCATTTAACTAG 58.340 45.455 5.50 0.00 42.27 2.57
267 269 9.396022 AGAGTAACATTATTTTGATCACGGATT 57.604 29.630 0.00 0.00 0.00 3.01
302 311 5.010708 TGGATCACACCAGCCTATATAGA 57.989 43.478 11.53 0.00 34.77 1.98
383 393 2.819550 CGATCCCGGTCCCGAATT 59.180 61.111 7.42 0.00 42.83 2.17
416 426 2.503061 CCACTCCCTGCATCTCCG 59.497 66.667 0.00 0.00 0.00 4.63
535 559 2.058595 CCATCCCGGACCTTCGTCT 61.059 63.158 0.73 0.00 39.15 4.18
670 694 3.426568 GTCGCTGTTGCTGCCTCC 61.427 66.667 0.00 0.00 36.97 4.30
883 916 3.809013 GGCGGTCCATCCCCACAT 61.809 66.667 0.00 0.00 0.00 3.21
1166 1199 1.266867 GGCTACTTCCCACCCCGTTA 61.267 60.000 0.00 0.00 0.00 3.18
1206 1239 2.880890 GCTTCAGGTTCAGAGCTTTTCA 59.119 45.455 0.00 0.00 0.00 2.69
1263 1296 0.588252 CGTCTGGTTCAGTTGCAAGG 59.412 55.000 0.00 0.00 32.61 3.61
1264 1297 1.810031 CGTCTGGTTCAGTTGCAAGGA 60.810 52.381 0.00 0.00 32.61 3.36
1343 1378 7.013220 AGCCATTATAGAACTGATGGAGACTA 58.987 38.462 5.46 0.00 41.20 2.59
1458 1497 3.008049 ACCAGCAGTACAAGGAGTTTAGG 59.992 47.826 0.00 0.00 0.00 2.69
1459 1498 3.600388 CAGCAGTACAAGGAGTTTAGGG 58.400 50.000 0.00 0.00 0.00 3.53
1460 1499 2.027100 AGCAGTACAAGGAGTTTAGGGC 60.027 50.000 0.00 0.00 0.00 5.19
1461 1500 2.940083 GCAGTACAAGGAGTTTAGGGCC 60.940 54.545 0.00 0.00 0.00 5.80
1462 1501 2.572104 CAGTACAAGGAGTTTAGGGCCT 59.428 50.000 12.58 12.58 0.00 5.19
1463 1502 3.773119 CAGTACAAGGAGTTTAGGGCCTA 59.227 47.826 9.81 9.81 0.00 3.93
1464 1503 4.409247 CAGTACAAGGAGTTTAGGGCCTAT 59.591 45.833 15.37 0.00 0.00 2.57
1465 1504 5.037598 AGTACAAGGAGTTTAGGGCCTATT 58.962 41.667 15.37 1.09 0.00 1.73
1466 1505 4.505324 ACAAGGAGTTTAGGGCCTATTC 57.495 45.455 15.37 12.20 0.00 1.75
1467 1506 3.118371 ACAAGGAGTTTAGGGCCTATTCG 60.118 47.826 15.37 3.66 0.00 3.34
1468 1507 2.047830 AGGAGTTTAGGGCCTATTCGG 58.952 52.381 15.37 0.00 0.00 4.30
1469 1508 1.767088 GGAGTTTAGGGCCTATTCGGT 59.233 52.381 15.37 0.00 34.25 4.69
1470 1509 2.172082 GGAGTTTAGGGCCTATTCGGTT 59.828 50.000 15.37 0.00 34.25 4.44
1471 1510 3.371273 GGAGTTTAGGGCCTATTCGGTTT 60.371 47.826 15.37 0.00 34.25 3.27
1472 1511 3.617284 AGTTTAGGGCCTATTCGGTTTG 58.383 45.455 15.37 0.00 34.25 2.93
1473 1512 2.686405 GTTTAGGGCCTATTCGGTTTGG 59.314 50.000 15.37 0.00 34.25 3.28
1474 1513 1.882308 TAGGGCCTATTCGGTTTGGA 58.118 50.000 9.81 0.00 34.25 3.53
1475 1514 0.546598 AGGGCCTATTCGGTTTGGAG 59.453 55.000 2.82 0.00 34.25 3.86
1476 1515 0.465642 GGGCCTATTCGGTTTGGAGG 60.466 60.000 0.84 0.00 34.25 4.30
1477 1516 0.544697 GGCCTATTCGGTTTGGAGGA 59.455 55.000 0.00 0.00 34.25 3.71
1478 1517 1.143073 GGCCTATTCGGTTTGGAGGAT 59.857 52.381 0.00 0.00 34.25 3.24
1479 1518 2.422945 GGCCTATTCGGTTTGGAGGATT 60.423 50.000 0.00 0.00 34.25 3.01
1480 1519 3.288092 GCCTATTCGGTTTGGAGGATTT 58.712 45.455 0.00 0.00 34.25 2.17
1481 1520 3.699538 GCCTATTCGGTTTGGAGGATTTT 59.300 43.478 0.00 0.00 34.25 1.82
1482 1521 4.202020 GCCTATTCGGTTTGGAGGATTTTC 60.202 45.833 0.00 0.00 34.25 2.29
1483 1522 4.947388 CCTATTCGGTTTGGAGGATTTTCA 59.053 41.667 0.00 0.00 0.00 2.69
1484 1523 5.594317 CCTATTCGGTTTGGAGGATTTTCAT 59.406 40.000 0.00 0.00 0.00 2.57
1485 1524 6.770785 CCTATTCGGTTTGGAGGATTTTCATA 59.229 38.462 0.00 0.00 0.00 2.15
1486 1525 6.699575 ATTCGGTTTGGAGGATTTTCATAG 57.300 37.500 0.00 0.00 0.00 2.23
1487 1526 4.523083 TCGGTTTGGAGGATTTTCATAGG 58.477 43.478 0.00 0.00 0.00 2.57
1488 1527 4.226394 TCGGTTTGGAGGATTTTCATAGGA 59.774 41.667 0.00 0.00 0.00 2.94
1489 1528 4.947388 CGGTTTGGAGGATTTTCATAGGAA 59.053 41.667 0.00 0.00 0.00 3.36
1490 1529 5.417580 CGGTTTGGAGGATTTTCATAGGAAA 59.582 40.000 0.00 0.00 41.13 3.13
1491 1530 6.625081 CGGTTTGGAGGATTTTCATAGGAAAC 60.625 42.308 1.27 0.00 42.48 2.78
1492 1531 6.210584 GGTTTGGAGGATTTTCATAGGAAACA 59.789 38.462 1.27 0.00 42.48 2.83
1493 1532 6.834168 TTGGAGGATTTTCATAGGAAACAC 57.166 37.500 1.27 0.00 42.48 3.32
1494 1533 5.886609 TGGAGGATTTTCATAGGAAACACA 58.113 37.500 1.27 0.00 42.48 3.72
1495 1534 6.493166 TGGAGGATTTTCATAGGAAACACAT 58.507 36.000 1.27 0.00 42.48 3.21
1496 1535 7.638444 TGGAGGATTTTCATAGGAAACACATA 58.362 34.615 1.27 0.00 42.48 2.29
1497 1536 7.775093 TGGAGGATTTTCATAGGAAACACATAG 59.225 37.037 1.27 0.00 42.48 2.23
1498 1537 7.229506 GGAGGATTTTCATAGGAAACACATAGG 59.770 40.741 1.27 0.00 42.48 2.57
1499 1538 7.872138 AGGATTTTCATAGGAAACACATAGGA 58.128 34.615 1.27 0.00 42.48 2.94
1500 1539 8.336235 AGGATTTTCATAGGAAACACATAGGAA 58.664 33.333 1.27 0.00 42.48 3.36
1501 1540 8.406297 GGATTTTCATAGGAAACACATAGGAAC 58.594 37.037 1.27 0.00 42.48 3.62
1502 1541 8.877864 ATTTTCATAGGAAACACATAGGAACA 57.122 30.769 1.27 0.00 42.48 3.18
1503 1542 8.698973 TTTTCATAGGAAACACATAGGAACAA 57.301 30.769 1.27 0.00 42.48 2.83
1504 1543 7.921786 TTCATAGGAAACACATAGGAACAAG 57.078 36.000 0.00 0.00 32.21 3.16
1505 1544 6.414732 TCATAGGAAACACATAGGAACAAGG 58.585 40.000 0.00 0.00 0.00 3.61
1506 1545 4.993705 AGGAAACACATAGGAACAAGGA 57.006 40.909 0.00 0.00 0.00 3.36
1507 1546 5.520748 AGGAAACACATAGGAACAAGGAT 57.479 39.130 0.00 0.00 0.00 3.24
1508 1547 5.892348 AGGAAACACATAGGAACAAGGATT 58.108 37.500 0.00 0.00 0.00 3.01
1509 1548 5.946377 AGGAAACACATAGGAACAAGGATTC 59.054 40.000 0.00 0.00 0.00 2.52
1517 1556 3.721087 GGAACAAGGATTCCAGAGGAA 57.279 47.619 5.29 0.30 46.49 3.36
1518 1557 4.034285 GGAACAAGGATTCCAGAGGAAA 57.966 45.455 5.29 0.00 45.41 3.13
1519 1558 4.407365 GGAACAAGGATTCCAGAGGAAAA 58.593 43.478 5.29 0.00 45.41 2.29
1520 1559 5.019470 GGAACAAGGATTCCAGAGGAAAAT 58.981 41.667 5.29 0.00 45.41 1.82
1521 1560 5.481824 GGAACAAGGATTCCAGAGGAAAATT 59.518 40.000 5.29 0.00 45.41 1.82
1522 1561 6.014242 GGAACAAGGATTCCAGAGGAAAATTT 60.014 38.462 5.29 0.00 45.41 1.82
1523 1562 6.596309 ACAAGGATTCCAGAGGAAAATTTC 57.404 37.500 5.29 0.00 45.41 2.17
1524 1563 5.481824 ACAAGGATTCCAGAGGAAAATTTCC 59.518 40.000 16.59 16.59 45.41 3.13
1539 1578 7.308435 GGAAAATTTCCTATAGATGCATTCGG 58.692 38.462 17.01 0.00 46.57 4.30
1540 1579 7.040409 GGAAAATTTCCTATAGATGCATTCGGT 60.040 37.037 17.01 0.00 46.57 4.69
1541 1580 7.823745 AAATTTCCTATAGATGCATTCGGTT 57.176 32.000 0.00 0.00 0.00 4.44
1542 1581 7.823745 AATTTCCTATAGATGCATTCGGTTT 57.176 32.000 0.00 0.00 0.00 3.27
1543 1582 6.618287 TTTCCTATAGATGCATTCGGTTTG 57.382 37.500 0.00 0.00 0.00 2.93
1544 1583 5.290493 TCCTATAGATGCATTCGGTTTGT 57.710 39.130 0.00 0.00 0.00 2.83
1545 1584 6.413783 TCCTATAGATGCATTCGGTTTGTA 57.586 37.500 0.00 0.00 0.00 2.41
1546 1585 6.455647 TCCTATAGATGCATTCGGTTTGTAG 58.544 40.000 0.00 0.00 0.00 2.74
1547 1586 5.639506 CCTATAGATGCATTCGGTTTGTAGG 59.360 44.000 0.00 1.63 0.00 3.18
1548 1587 3.627395 AGATGCATTCGGTTTGTAGGA 57.373 42.857 0.00 0.00 0.00 2.94
1549 1588 3.950397 AGATGCATTCGGTTTGTAGGAA 58.050 40.909 0.00 0.00 0.00 3.36
1550 1589 4.331968 AGATGCATTCGGTTTGTAGGAAA 58.668 39.130 0.00 0.00 0.00 3.13
1551 1590 4.949856 AGATGCATTCGGTTTGTAGGAAAT 59.050 37.500 0.00 0.00 0.00 2.17
1552 1591 4.433186 TGCATTCGGTTTGTAGGAAATG 57.567 40.909 0.00 0.00 0.00 2.32
1553 1592 3.823873 TGCATTCGGTTTGTAGGAAATGT 59.176 39.130 0.00 0.00 0.00 2.71
1554 1593 4.165779 GCATTCGGTTTGTAGGAAATGTG 58.834 43.478 0.00 0.00 0.00 3.21
1555 1594 4.320935 GCATTCGGTTTGTAGGAAATGTGT 60.321 41.667 0.00 0.00 0.00 3.72
1556 1595 5.106475 GCATTCGGTTTGTAGGAAATGTGTA 60.106 40.000 0.00 0.00 0.00 2.90
1557 1596 5.927954 TTCGGTTTGTAGGAAATGTGTAC 57.072 39.130 0.00 0.00 0.00 2.90
1558 1597 4.958509 TCGGTTTGTAGGAAATGTGTACA 58.041 39.130 0.00 0.00 0.00 2.90
1559 1598 4.992319 TCGGTTTGTAGGAAATGTGTACAG 59.008 41.667 0.00 0.00 0.00 2.74
1560 1599 4.992319 CGGTTTGTAGGAAATGTGTACAGA 59.008 41.667 0.00 0.00 0.00 3.41
1561 1600 5.467399 CGGTTTGTAGGAAATGTGTACAGAA 59.533 40.000 0.00 0.00 0.00 3.02
1562 1601 6.017770 CGGTTTGTAGGAAATGTGTACAGAAA 60.018 38.462 0.00 0.00 0.00 2.52
1563 1602 7.308348 CGGTTTGTAGGAAATGTGTACAGAAAT 60.308 37.037 0.00 0.00 0.00 2.17
1564 1603 9.005777 GGTTTGTAGGAAATGTGTACAGAAATA 57.994 33.333 0.00 0.00 0.00 1.40
1567 1606 8.642908 TGTAGGAAATGTGTACAGAAATATCG 57.357 34.615 0.00 0.00 0.00 2.92
1568 1607 8.255206 TGTAGGAAATGTGTACAGAAATATCGT 58.745 33.333 0.00 0.00 0.00 3.73
1569 1608 9.740239 GTAGGAAATGTGTACAGAAATATCGTA 57.260 33.333 0.00 0.00 0.00 3.43
1570 1609 8.873215 AGGAAATGTGTACAGAAATATCGTAG 57.127 34.615 0.00 0.00 0.00 3.51
1571 1610 7.926555 AGGAAATGTGTACAGAAATATCGTAGG 59.073 37.037 0.00 0.00 0.00 3.18
1572 1611 7.924412 GGAAATGTGTACAGAAATATCGTAGGA 59.076 37.037 0.00 0.00 0.00 2.94
1573 1612 9.309516 GAAATGTGTACAGAAATATCGTAGGAA 57.690 33.333 0.00 0.00 0.00 3.36
1574 1613 9.832445 AAATGTGTACAGAAATATCGTAGGAAT 57.168 29.630 0.00 0.00 0.00 3.01
1576 1615 9.909644 ATGTGTACAGAAATATCGTAGGAATAC 57.090 33.333 0.00 0.00 0.00 1.89
1577 1616 9.128404 TGTGTACAGAAATATCGTAGGAATACT 57.872 33.333 0.00 0.00 0.00 2.12
1590 1629 8.707796 TCGTAGGAATACTATTCATTTCCTCT 57.292 34.615 10.37 0.63 43.45 3.69
1591 1630 8.577296 TCGTAGGAATACTATTCATTTCCTCTG 58.423 37.037 10.37 1.98 43.45 3.35
1592 1631 8.361139 CGTAGGAATACTATTCATTTCCTCTGT 58.639 37.037 10.37 0.00 43.45 3.41
1595 1634 9.981460 AGGAATACTATTCATTTCCTCTGTTTT 57.019 29.630 10.37 0.00 43.45 2.43
1599 1638 9.753674 ATACTATTCATTTCCTCTGTTTTTGGA 57.246 29.630 0.00 0.00 0.00 3.53
1600 1639 8.115490 ACTATTCATTTCCTCTGTTTTTGGAG 57.885 34.615 0.00 0.00 0.00 3.86
1614 1653 8.966868 TCTGTTTTTGGAGGAAATTATACATCC 58.033 33.333 0.00 0.00 37.47 3.51
1615 1654 8.657387 TGTTTTTGGAGGAAATTATACATCCA 57.343 30.769 8.71 8.71 43.55 3.41
1616 1655 8.527810 TGTTTTTGGAGGAAATTATACATCCAC 58.472 33.333 11.27 0.00 44.61 4.02
1617 1656 8.749354 GTTTTTGGAGGAAATTATACATCCACT 58.251 33.333 11.27 0.00 44.61 4.00
1618 1657 8.519799 TTTTGGAGGAAATTATACATCCACTC 57.480 34.615 11.27 0.00 44.61 3.51
1619 1658 6.823286 TGGAGGAAATTATACATCCACTCA 57.177 37.500 8.71 0.00 41.07 3.41
1620 1659 7.206789 TGGAGGAAATTATACATCCACTCAA 57.793 36.000 8.71 0.00 41.07 3.02
1621 1660 7.638444 TGGAGGAAATTATACATCCACTCAAA 58.362 34.615 8.71 0.00 41.07 2.69
1622 1661 7.775093 TGGAGGAAATTATACATCCACTCAAAG 59.225 37.037 8.71 0.00 41.07 2.77
1623 1662 7.255277 GGAGGAAATTATACATCCACTCAAAGC 60.255 40.741 0.00 0.00 37.02 3.51
1624 1663 7.349598 AGGAAATTATACATCCACTCAAAGCT 58.650 34.615 0.00 0.00 35.62 3.74
1625 1664 7.500559 AGGAAATTATACATCCACTCAAAGCTC 59.499 37.037 0.00 0.00 35.62 4.09
1626 1665 7.283127 GGAAATTATACATCCACTCAAAGCTCA 59.717 37.037 0.00 0.00 33.30 4.26
1627 1666 8.757982 AAATTATACATCCACTCAAAGCTCAT 57.242 30.769 0.00 0.00 0.00 2.90
1628 1667 8.757982 AATTATACATCCACTCAAAGCTCATT 57.242 30.769 0.00 0.00 0.00 2.57
1629 1668 8.757982 ATTATACATCCACTCAAAGCTCATTT 57.242 30.769 0.00 0.00 0.00 2.32
1630 1669 8.579850 TTATACATCCACTCAAAGCTCATTTT 57.420 30.769 0.00 0.00 0.00 1.82
1631 1670 9.679661 TTATACATCCACTCAAAGCTCATTTTA 57.320 29.630 0.00 0.00 0.00 1.52
1632 1671 6.259550 ACATCCACTCAAAGCTCATTTTAC 57.740 37.500 0.00 0.00 0.00 2.01
1633 1672 5.106555 ACATCCACTCAAAGCTCATTTTACG 60.107 40.000 0.00 0.00 0.00 3.18
1634 1673 3.188460 TCCACTCAAAGCTCATTTTACGC 59.812 43.478 0.00 0.00 0.00 4.42
1635 1674 3.155998 CACTCAAAGCTCATTTTACGCG 58.844 45.455 3.53 3.53 0.00 6.01
1636 1675 2.806244 ACTCAAAGCTCATTTTACGCGT 59.194 40.909 19.17 19.17 0.00 6.01
1637 1676 3.991773 ACTCAAAGCTCATTTTACGCGTA 59.008 39.130 16.41 16.41 0.00 4.42
1638 1677 4.091509 ACTCAAAGCTCATTTTACGCGTAG 59.908 41.667 19.61 9.64 0.00 3.51
1639 1678 3.369756 TCAAAGCTCATTTTACGCGTAGG 59.630 43.478 19.61 10.54 0.00 3.18
1640 1679 2.953466 AGCTCATTTTACGCGTAGGA 57.047 45.000 19.61 12.24 0.00 2.94
1641 1680 3.241067 AGCTCATTTTACGCGTAGGAA 57.759 42.857 19.61 17.60 0.00 3.36
1642 1681 2.928116 AGCTCATTTTACGCGTAGGAAC 59.072 45.455 19.61 10.91 0.00 3.62
1653 1692 2.177950 GTAGGAACGAGGCGAGTCA 58.822 57.895 0.00 0.00 0.00 3.41
1654 1693 0.524862 GTAGGAACGAGGCGAGTCAA 59.475 55.000 0.00 0.00 0.00 3.18
1655 1694 1.068055 GTAGGAACGAGGCGAGTCAAA 60.068 52.381 0.00 0.00 0.00 2.69
1656 1695 0.608640 AGGAACGAGGCGAGTCAAAT 59.391 50.000 0.00 0.00 0.00 2.32
1657 1696 1.000145 GGAACGAGGCGAGTCAAATC 59.000 55.000 0.00 0.00 0.00 2.17
1658 1697 1.000145 GAACGAGGCGAGTCAAATCC 59.000 55.000 0.00 0.00 0.00 3.01
1659 1698 0.608640 AACGAGGCGAGTCAAATCCT 59.391 50.000 0.00 0.00 0.00 3.24
1660 1699 0.608640 ACGAGGCGAGTCAAATCCTT 59.391 50.000 0.00 0.00 0.00 3.36
1661 1700 1.822990 ACGAGGCGAGTCAAATCCTTA 59.177 47.619 0.00 0.00 0.00 2.69
1662 1701 2.232941 ACGAGGCGAGTCAAATCCTTAA 59.767 45.455 0.00 0.00 0.00 1.85
1663 1702 2.860735 CGAGGCGAGTCAAATCCTTAAG 59.139 50.000 0.00 0.00 0.00 1.85
1664 1703 3.428999 CGAGGCGAGTCAAATCCTTAAGA 60.429 47.826 3.36 0.00 0.00 2.10
1665 1704 4.698575 GAGGCGAGTCAAATCCTTAAGAT 58.301 43.478 3.36 0.00 36.48 2.40
1666 1705 4.446371 AGGCGAGTCAAATCCTTAAGATG 58.554 43.478 3.36 0.00 34.56 2.90
1667 1706 3.561725 GGCGAGTCAAATCCTTAAGATGG 59.438 47.826 3.36 0.00 34.56 3.51
1668 1707 3.002759 GCGAGTCAAATCCTTAAGATGGC 59.997 47.826 3.36 0.00 34.56 4.40
1669 1708 4.191544 CGAGTCAAATCCTTAAGATGGCA 58.808 43.478 3.36 0.00 34.56 4.92
1670 1709 4.635765 CGAGTCAAATCCTTAAGATGGCAA 59.364 41.667 3.36 0.00 34.56 4.52
1671 1710 5.220739 CGAGTCAAATCCTTAAGATGGCAAG 60.221 44.000 3.36 0.00 34.56 4.01
1672 1711 5.574188 AGTCAAATCCTTAAGATGGCAAGT 58.426 37.500 3.36 0.00 34.56 3.16
1673 1712 5.416952 AGTCAAATCCTTAAGATGGCAAGTG 59.583 40.000 3.36 0.00 34.56 3.16
1674 1713 4.158394 TCAAATCCTTAAGATGGCAAGTGC 59.842 41.667 3.36 0.00 34.56 4.40
1688 1727 4.376340 GCAAGTGCCATGCTATAAAGTT 57.624 40.909 0.00 0.00 40.64 2.66
1689 1728 4.354587 GCAAGTGCCATGCTATAAAGTTC 58.645 43.478 0.00 0.00 40.64 3.01
1690 1729 4.734695 GCAAGTGCCATGCTATAAAGTTCC 60.735 45.833 0.00 0.00 40.64 3.62
1691 1730 4.510167 AGTGCCATGCTATAAAGTTCCT 57.490 40.909 0.00 0.00 0.00 3.36
1692 1731 5.630415 AGTGCCATGCTATAAAGTTCCTA 57.370 39.130 0.00 0.00 0.00 2.94
1693 1732 6.192970 AGTGCCATGCTATAAAGTTCCTAT 57.807 37.500 0.00 0.00 0.00 2.57
1694 1733 7.316393 AGTGCCATGCTATAAAGTTCCTATA 57.684 36.000 0.00 0.00 0.00 1.31
1695 1734 7.745717 AGTGCCATGCTATAAAGTTCCTATAA 58.254 34.615 0.00 0.00 0.00 0.98
1696 1735 8.386264 AGTGCCATGCTATAAAGTTCCTATAAT 58.614 33.333 0.00 0.00 0.00 1.28
1697 1736 9.667107 GTGCCATGCTATAAAGTTCCTATAATA 57.333 33.333 0.00 0.00 0.00 0.98
1698 1737 9.890629 TGCCATGCTATAAAGTTCCTATAATAG 57.109 33.333 0.00 0.00 0.00 1.73
1699 1738 9.892130 GCCATGCTATAAAGTTCCTATAATAGT 57.108 33.333 0.00 0.00 0.00 2.12
1729 1768 9.713684 AATTCCTACATTATGAAATCCTCCAAA 57.286 29.630 0.00 0.00 0.00 3.28
1730 1769 8.519799 TTCCTACATTATGAAATCCTCCAAAC 57.480 34.615 0.00 0.00 0.00 2.93
1731 1770 7.060421 TCCTACATTATGAAATCCTCCAAACC 58.940 38.462 0.00 0.00 0.00 3.27
1732 1771 5.835113 ACATTATGAAATCCTCCAAACCG 57.165 39.130 0.00 0.00 0.00 4.44
1733 1772 5.505780 ACATTATGAAATCCTCCAAACCGA 58.494 37.500 0.00 0.00 0.00 4.69
1734 1773 5.949354 ACATTATGAAATCCTCCAAACCGAA 59.051 36.000 0.00 0.00 0.00 4.30
1735 1774 6.607198 ACATTATGAAATCCTCCAAACCGAAT 59.393 34.615 0.00 0.00 0.00 3.34
1736 1775 4.989279 ATGAAATCCTCCAAACCGAATG 57.011 40.909 0.00 0.00 0.00 2.67
1737 1776 4.027674 TGAAATCCTCCAAACCGAATGA 57.972 40.909 0.00 0.00 0.00 2.57
1738 1777 4.009675 TGAAATCCTCCAAACCGAATGAG 58.990 43.478 0.00 0.00 0.00 2.90
1739 1778 2.044123 ATCCTCCAAACCGAATGAGC 57.956 50.000 0.00 0.00 0.00 4.26
1740 1779 0.035439 TCCTCCAAACCGAATGAGCC 60.035 55.000 0.00 0.00 0.00 4.70
1741 1780 1.032114 CCTCCAAACCGAATGAGCCC 61.032 60.000 0.00 0.00 0.00 5.19
1742 1781 0.035056 CTCCAAACCGAATGAGCCCT 60.035 55.000 0.00 0.00 0.00 5.19
1743 1782 0.404040 TCCAAACCGAATGAGCCCTT 59.596 50.000 0.00 0.00 0.00 3.95
1744 1783 1.631388 TCCAAACCGAATGAGCCCTTA 59.369 47.619 0.00 0.00 0.00 2.69
1745 1784 2.017049 CCAAACCGAATGAGCCCTTAG 58.983 52.381 0.00 0.00 0.00 2.18
1788 1827 2.877097 TGATCCCTACTTTGCAGCAA 57.123 45.000 2.83 2.83 0.00 3.91
1793 1832 2.161855 CCCTACTTTGCAGCAATGTGA 58.838 47.619 28.45 15.62 34.43 3.58
2081 2122 1.528309 CGTCACCCCTGCCAACTTT 60.528 57.895 0.00 0.00 0.00 2.66
2121 2162 0.248012 TTCCTCCTTGCGCGTTATCA 59.752 50.000 8.43 0.00 0.00 2.15
2128 2169 2.203153 GCGCGTTATCACCCCCAT 60.203 61.111 8.43 0.00 0.00 4.00
2229 2271 2.680913 CGTGGCGGGCTCAGAAAAG 61.681 63.158 2.38 0.00 0.00 2.27
2242 2284 4.621087 AAAAGCTGGCCGCCCCTT 62.621 61.111 7.03 6.77 40.39 3.95
2307 2351 2.126071 CTCGTCGCCGACCACAAT 60.126 61.111 12.26 0.00 38.40 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.933287 ATCCAACCACTCCCGCCA 60.933 61.111 0.00 0.00 0.00 5.69
1 2 2.438434 CATCCAACCACTCCCGCC 60.438 66.667 0.00 0.00 0.00 6.13
2 3 3.134127 GCATCCAACCACTCCCGC 61.134 66.667 0.00 0.00 0.00 6.13
3 4 1.746615 CTGCATCCAACCACTCCCG 60.747 63.158 0.00 0.00 0.00 5.14
4 5 0.678048 GTCTGCATCCAACCACTCCC 60.678 60.000 0.00 0.00 0.00 4.30
5 6 1.021390 CGTCTGCATCCAACCACTCC 61.021 60.000 0.00 0.00 0.00 3.85
6 7 0.037326 TCGTCTGCATCCAACCACTC 60.037 55.000 0.00 0.00 0.00 3.51
7 8 0.615331 ATCGTCTGCATCCAACCACT 59.385 50.000 0.00 0.00 0.00 4.00
8 9 1.453155 AATCGTCTGCATCCAACCAC 58.547 50.000 0.00 0.00 0.00 4.16
9 10 2.419990 CCTAATCGTCTGCATCCAACCA 60.420 50.000 0.00 0.00 0.00 3.67
10 11 2.213499 CCTAATCGTCTGCATCCAACC 58.787 52.381 0.00 0.00 0.00 3.77
11 12 1.599542 GCCTAATCGTCTGCATCCAAC 59.400 52.381 0.00 0.00 0.00 3.77
12 13 1.475034 GGCCTAATCGTCTGCATCCAA 60.475 52.381 0.00 0.00 0.00 3.53
13 14 0.106708 GGCCTAATCGTCTGCATCCA 59.893 55.000 0.00 0.00 0.00 3.41
14 15 0.394565 AGGCCTAATCGTCTGCATCC 59.605 55.000 1.29 0.00 0.00 3.51
15 16 2.353208 CCTAGGCCTAATCGTCTGCATC 60.353 54.545 14.85 0.00 0.00 3.91
16 17 1.620819 CCTAGGCCTAATCGTCTGCAT 59.379 52.381 14.85 0.00 0.00 3.96
17 18 1.040646 CCTAGGCCTAATCGTCTGCA 58.959 55.000 14.85 0.00 0.00 4.41
18 19 1.041437 ACCTAGGCCTAATCGTCTGC 58.959 55.000 14.85 0.00 0.00 4.26
19 20 2.820787 CCTACCTAGGCCTAATCGTCTG 59.179 54.545 14.85 0.00 36.53 3.51
20 21 3.157750 CCTACCTAGGCCTAATCGTCT 57.842 52.381 14.85 0.00 36.53 4.18
31 32 1.025812 CTCTGTCGTGCCTACCTAGG 58.974 60.000 7.41 7.41 46.42 3.02
32 33 1.025812 CCTCTGTCGTGCCTACCTAG 58.974 60.000 0.00 0.00 0.00 3.02
33 34 0.622136 TCCTCTGTCGTGCCTACCTA 59.378 55.000 0.00 0.00 0.00 3.08
34 35 0.681564 CTCCTCTGTCGTGCCTACCT 60.682 60.000 0.00 0.00 0.00 3.08
35 36 0.680280 TCTCCTCTGTCGTGCCTACC 60.680 60.000 0.00 0.00 0.00 3.18
36 37 1.174783 TTCTCCTCTGTCGTGCCTAC 58.825 55.000 0.00 0.00 0.00 3.18
37 38 1.919240 TTTCTCCTCTGTCGTGCCTA 58.081 50.000 0.00 0.00 0.00 3.93
38 39 1.205893 GATTTCTCCTCTGTCGTGCCT 59.794 52.381 0.00 0.00 0.00 4.75
39 40 1.646189 GATTTCTCCTCTGTCGTGCC 58.354 55.000 0.00 0.00 0.00 5.01
40 41 1.272781 CGATTTCTCCTCTGTCGTGC 58.727 55.000 0.00 0.00 0.00 5.34
41 42 2.520979 GACGATTTCTCCTCTGTCGTG 58.479 52.381 3.29 0.00 44.49 4.35
42 43 1.130749 CGACGATTTCTCCTCTGTCGT 59.869 52.381 4.56 0.00 46.78 4.34
43 44 1.816370 CGACGATTTCTCCTCTGTCG 58.184 55.000 0.00 0.00 42.37 4.35
44 45 1.135373 TGCGACGATTTCTCCTCTGTC 60.135 52.381 0.00 0.00 0.00 3.51
45 46 0.888619 TGCGACGATTTCTCCTCTGT 59.111 50.000 0.00 0.00 0.00 3.41
46 47 1.554392 CTGCGACGATTTCTCCTCTG 58.446 55.000 0.00 0.00 0.00 3.35
47 48 0.457851 CCTGCGACGATTTCTCCTCT 59.542 55.000 0.00 0.00 0.00 3.69
48 49 0.173708 ACCTGCGACGATTTCTCCTC 59.826 55.000 0.00 0.00 0.00 3.71
49 50 0.108615 CACCTGCGACGATTTCTCCT 60.109 55.000 0.00 0.00 0.00 3.69
50 51 0.108804 TCACCTGCGACGATTTCTCC 60.109 55.000 0.00 0.00 0.00 3.71
51 52 1.272781 CTCACCTGCGACGATTTCTC 58.727 55.000 0.00 0.00 0.00 2.87
52 53 0.108615 CCTCACCTGCGACGATTTCT 60.109 55.000 0.00 0.00 0.00 2.52
53 54 0.108804 TCCTCACCTGCGACGATTTC 60.109 55.000 0.00 0.00 0.00 2.17
54 55 0.108615 CTCCTCACCTGCGACGATTT 60.109 55.000 0.00 0.00 0.00 2.17
55 56 1.251527 ACTCCTCACCTGCGACGATT 61.252 55.000 0.00 0.00 0.00 3.34
56 57 0.393944 TACTCCTCACCTGCGACGAT 60.394 55.000 0.00 0.00 0.00 3.73
57 58 0.607217 TTACTCCTCACCTGCGACGA 60.607 55.000 0.00 0.00 0.00 4.20
58 59 0.179161 CTTACTCCTCACCTGCGACG 60.179 60.000 0.00 0.00 0.00 5.12
59 60 1.174783 TCTTACTCCTCACCTGCGAC 58.825 55.000 0.00 0.00 0.00 5.19
60 61 1.819288 CTTCTTACTCCTCACCTGCGA 59.181 52.381 0.00 0.00 0.00 5.10
61 62 1.134965 CCTTCTTACTCCTCACCTGCG 60.135 57.143 0.00 0.00 0.00 5.18
62 63 1.903183 ACCTTCTTACTCCTCACCTGC 59.097 52.381 0.00 0.00 0.00 4.85
63 64 3.165875 TCACCTTCTTACTCCTCACCTG 58.834 50.000 0.00 0.00 0.00 4.00
64 65 3.544698 TCACCTTCTTACTCCTCACCT 57.455 47.619 0.00 0.00 0.00 4.00
65 66 3.323979 TGTTCACCTTCTTACTCCTCACC 59.676 47.826 0.00 0.00 0.00 4.02
66 67 4.602340 TGTTCACCTTCTTACTCCTCAC 57.398 45.455 0.00 0.00 0.00 3.51
67 68 4.593206 ACATGTTCACCTTCTTACTCCTCA 59.407 41.667 0.00 0.00 0.00 3.86
68 69 4.932200 CACATGTTCACCTTCTTACTCCTC 59.068 45.833 0.00 0.00 0.00 3.71
69 70 4.263068 CCACATGTTCACCTTCTTACTCCT 60.263 45.833 0.00 0.00 0.00 3.69
70 71 4.003648 CCACATGTTCACCTTCTTACTCC 58.996 47.826 0.00 0.00 0.00 3.85
71 72 4.003648 CCCACATGTTCACCTTCTTACTC 58.996 47.826 0.00 0.00 0.00 2.59
72 73 3.244911 CCCCACATGTTCACCTTCTTACT 60.245 47.826 0.00 0.00 0.00 2.24
73 74 3.081804 CCCCACATGTTCACCTTCTTAC 58.918 50.000 0.00 0.00 0.00 2.34
74 75 2.041081 CCCCCACATGTTCACCTTCTTA 59.959 50.000 0.00 0.00 0.00 2.10
75 76 1.203050 CCCCCACATGTTCACCTTCTT 60.203 52.381 0.00 0.00 0.00 2.52
76 77 0.405585 CCCCCACATGTTCACCTTCT 59.594 55.000 0.00 0.00 0.00 2.85
77 78 1.250840 GCCCCCACATGTTCACCTTC 61.251 60.000 0.00 0.00 0.00 3.46
78 79 1.228862 GCCCCCACATGTTCACCTT 60.229 57.895 0.00 0.00 0.00 3.50
79 80 2.440599 GCCCCCACATGTTCACCT 59.559 61.111 0.00 0.00 0.00 4.00
80 81 3.061848 CGCCCCCACATGTTCACC 61.062 66.667 0.00 0.00 0.00 4.02
81 82 2.282180 ACGCCCCCACATGTTCAC 60.282 61.111 0.00 0.00 0.00 3.18
82 83 2.282110 CACGCCCCCACATGTTCA 60.282 61.111 0.00 0.00 0.00 3.18
83 84 3.747976 GCACGCCCCCACATGTTC 61.748 66.667 0.00 0.00 0.00 3.18
84 85 4.284550 AGCACGCCCCCACATGTT 62.285 61.111 0.00 0.00 0.00 2.71
85 86 4.722700 GAGCACGCCCCCACATGT 62.723 66.667 0.00 0.00 0.00 3.21
89 90 3.712907 TTAGGAGCACGCCCCCAC 61.713 66.667 0.00 0.00 0.00 4.61
90 91 3.712907 GTTAGGAGCACGCCCCCA 61.713 66.667 0.00 0.00 0.00 4.96
91 92 4.484872 GGTTAGGAGCACGCCCCC 62.485 72.222 0.00 0.00 0.00 5.40
92 93 2.552231 AATGGTTAGGAGCACGCCCC 62.552 60.000 0.00 0.00 35.86 5.80
93 94 1.077716 AATGGTTAGGAGCACGCCC 60.078 57.895 0.00 0.00 35.86 6.13
94 95 1.376609 CCAATGGTTAGGAGCACGCC 61.377 60.000 0.00 0.00 35.86 5.68
95 96 0.392461 TCCAATGGTTAGGAGCACGC 60.392 55.000 0.00 0.00 35.86 5.34
96 97 2.332063 ATCCAATGGTTAGGAGCACG 57.668 50.000 0.00 0.00 37.34 5.34
97 98 5.827797 TCAAATATCCAATGGTTAGGAGCAC 59.172 40.000 0.00 0.00 37.34 4.40
98 99 6.012337 TCAAATATCCAATGGTTAGGAGCA 57.988 37.500 0.00 0.00 37.34 4.26
99 100 6.071728 CCATCAAATATCCAATGGTTAGGAGC 60.072 42.308 0.00 0.00 37.34 4.70
100 101 6.071728 GCCATCAAATATCCAATGGTTAGGAG 60.072 42.308 0.00 0.00 40.66 3.69
101 102 5.774690 GCCATCAAATATCCAATGGTTAGGA 59.225 40.000 0.00 0.00 40.66 2.94
102 103 5.539574 TGCCATCAAATATCCAATGGTTAGG 59.460 40.000 0.00 0.00 40.66 2.69
103 104 6.653526 TGCCATCAAATATCCAATGGTTAG 57.346 37.500 0.00 0.00 40.66 2.34
104 105 7.429374 TTTGCCATCAAATATCCAATGGTTA 57.571 32.000 0.00 0.00 40.66 2.85
105 106 5.954153 TTGCCATCAAATATCCAATGGTT 57.046 34.783 0.00 0.00 40.66 3.67
106 107 5.954153 TTTGCCATCAAATATCCAATGGT 57.046 34.783 0.00 0.00 40.66 3.55
127 128 9.965824 AAATTCTTCGTGTCAATCACTATTTTT 57.034 25.926 0.00 0.00 44.16 1.94
128 129 9.965824 AAAATTCTTCGTGTCAATCACTATTTT 57.034 25.926 0.00 0.00 44.16 1.82
129 130 9.965824 AAAAATTCTTCGTGTCAATCACTATTT 57.034 25.926 0.00 0.00 44.16 1.40
130 131 9.612620 GAAAAATTCTTCGTGTCAATCACTATT 57.387 29.630 0.00 0.00 44.16 1.73
131 132 8.783093 TGAAAAATTCTTCGTGTCAATCACTAT 58.217 29.630 0.00 0.00 44.16 2.12
132 133 8.148807 TGAAAAATTCTTCGTGTCAATCACTA 57.851 30.769 0.00 0.00 44.16 2.74
133 134 7.026631 TGAAAAATTCTTCGTGTCAATCACT 57.973 32.000 0.00 0.00 44.16 3.41
134 135 6.360681 CCTGAAAAATTCTTCGTGTCAATCAC 59.639 38.462 0.00 0.00 43.03 3.06
135 136 6.437928 CCTGAAAAATTCTTCGTGTCAATCA 58.562 36.000 0.00 0.00 0.00 2.57
136 137 5.343325 GCCTGAAAAATTCTTCGTGTCAATC 59.657 40.000 0.00 0.00 0.00 2.67
137 138 5.221224 TGCCTGAAAAATTCTTCGTGTCAAT 60.221 36.000 0.00 0.00 0.00 2.57
138 139 4.097135 TGCCTGAAAAATTCTTCGTGTCAA 59.903 37.500 0.00 0.00 0.00 3.18
139 140 3.629855 TGCCTGAAAAATTCTTCGTGTCA 59.370 39.130 0.00 0.00 0.00 3.58
140 141 4.223320 TGCCTGAAAAATTCTTCGTGTC 57.777 40.909 0.00 0.00 0.00 3.67
141 142 4.520492 AGATGCCTGAAAAATTCTTCGTGT 59.480 37.500 0.00 0.00 0.00 4.49
142 143 5.051891 AGATGCCTGAAAAATTCTTCGTG 57.948 39.130 0.00 0.00 0.00 4.35
143 144 6.612306 GTTAGATGCCTGAAAAATTCTTCGT 58.388 36.000 0.00 0.00 0.00 3.85
144 145 5.734498 CGTTAGATGCCTGAAAAATTCTTCG 59.266 40.000 0.00 0.00 0.00 3.79
145 146 6.612306 ACGTTAGATGCCTGAAAAATTCTTC 58.388 36.000 0.00 0.00 0.00 2.87
146 147 6.575162 ACGTTAGATGCCTGAAAAATTCTT 57.425 33.333 0.00 0.00 0.00 2.52
147 148 6.575162 AACGTTAGATGCCTGAAAAATTCT 57.425 33.333 0.00 0.00 0.00 2.40
148 149 6.967199 CCTAACGTTAGATGCCTGAAAAATTC 59.033 38.462 31.97 0.00 32.47 2.17
149 150 6.433093 ACCTAACGTTAGATGCCTGAAAAATT 59.567 34.615 31.97 0.00 32.47 1.82
150 151 5.944007 ACCTAACGTTAGATGCCTGAAAAAT 59.056 36.000 31.97 0.14 32.47 1.82
151 152 5.180492 CACCTAACGTTAGATGCCTGAAAAA 59.820 40.000 31.97 0.00 32.47 1.94
152 153 4.693566 CACCTAACGTTAGATGCCTGAAAA 59.306 41.667 31.97 0.00 32.47 2.29
153 154 4.250464 CACCTAACGTTAGATGCCTGAAA 58.750 43.478 31.97 0.00 32.47 2.69
154 155 3.857052 CACCTAACGTTAGATGCCTGAA 58.143 45.455 31.97 0.00 32.47 3.02
155 156 2.418197 GCACCTAACGTTAGATGCCTGA 60.418 50.000 35.15 2.47 43.16 3.86
156 157 1.933853 GCACCTAACGTTAGATGCCTG 59.066 52.381 35.15 20.38 43.16 4.85
157 158 2.311124 GCACCTAACGTTAGATGCCT 57.689 50.000 35.15 11.98 43.16 4.75
202 203 2.813179 CTCGTGCGTTGCTATGGGC 61.813 63.158 0.00 0.00 42.22 5.36
203 204 2.813179 GCTCGTGCGTTGCTATGGG 61.813 63.158 0.00 0.00 0.00 4.00
204 205 1.431488 ATGCTCGTGCGTTGCTATGG 61.431 55.000 4.84 0.00 43.34 2.74
205 206 0.374758 AATGCTCGTGCGTTGCTATG 59.625 50.000 15.59 0.00 45.65 2.23
206 207 1.086696 AAATGCTCGTGCGTTGCTAT 58.913 45.000 16.88 0.00 46.57 2.97
207 208 1.715993 TAAATGCTCGTGCGTTGCTA 58.284 45.000 16.88 4.93 46.57 3.49
208 209 0.871722 TTAAATGCTCGTGCGTTGCT 59.128 45.000 16.88 5.86 46.57 3.91
209 210 0.974836 GTTAAATGCTCGTGCGTTGC 59.025 50.000 16.88 7.66 46.57 4.17
210 211 2.594529 AGTTAAATGCTCGTGCGTTG 57.405 45.000 16.88 0.00 46.57 4.10
212 213 2.955614 ACTAGTTAAATGCTCGTGCGT 58.044 42.857 4.84 0.99 43.34 5.24
213 214 6.929587 ATATACTAGTTAAATGCTCGTGCG 57.070 37.500 0.00 0.00 43.34 5.34
267 269 9.502091 GCTGGTGTGATCCAAATAACTATTATA 57.498 33.333 0.00 0.00 37.01 0.98
269 271 6.770785 GGCTGGTGTGATCCAAATAACTATTA 59.229 38.462 0.00 0.00 37.01 0.98
302 311 3.069318 GGAGAACCTCCGTCGCCT 61.069 66.667 0.00 0.00 41.08 5.52
381 391 0.710588 GGGGAGGTTGGGGAAGAAAT 59.289 55.000 0.00 0.00 0.00 2.17
383 393 1.072538 TGGGGAGGTTGGGGAAGAA 60.073 57.895 0.00 0.00 0.00 2.52
535 559 0.612744 TGGATGTGACGGATGCTTCA 59.387 50.000 1.64 0.00 0.00 3.02
658 682 4.284550 GGTGGGGAGGCAGCAACA 62.285 66.667 0.00 0.00 0.00 3.33
713 737 1.918800 CGTTGGGGAGGGAAGGTCT 60.919 63.158 0.00 0.00 0.00 3.85
776 809 2.964925 GCACGGTTGACTGCGTCA 60.965 61.111 7.20 7.20 41.09 4.35
1141 1174 1.302192 GTGGGAAGTAGCCACGCAA 60.302 57.895 0.00 0.00 0.00 4.85
1166 1199 5.105023 TGAAGCTCTACAGAATCTGAAGCAT 60.105 40.000 25.78 19.37 37.44 3.79
1263 1296 2.945668 ACAACAGCAAAACAGAGGACTC 59.054 45.455 0.00 0.00 0.00 3.36
1264 1297 3.004752 ACAACAGCAAAACAGAGGACT 57.995 42.857 0.00 0.00 0.00 3.85
1458 1497 0.544697 TCCTCCAAACCGAATAGGCC 59.455 55.000 0.00 0.00 46.52 5.19
1459 1498 2.640316 ATCCTCCAAACCGAATAGGC 57.360 50.000 0.00 0.00 46.52 3.93
1461 1500 6.699575 ATGAAAATCCTCCAAACCGAATAG 57.300 37.500 0.00 0.00 0.00 1.73
1462 1501 6.770785 CCTATGAAAATCCTCCAAACCGAATA 59.229 38.462 0.00 0.00 0.00 1.75
1463 1502 5.594317 CCTATGAAAATCCTCCAAACCGAAT 59.406 40.000 0.00 0.00 0.00 3.34
1464 1503 4.947388 CCTATGAAAATCCTCCAAACCGAA 59.053 41.667 0.00 0.00 0.00 4.30
1465 1504 4.226394 TCCTATGAAAATCCTCCAAACCGA 59.774 41.667 0.00 0.00 0.00 4.69
1466 1505 4.523083 TCCTATGAAAATCCTCCAAACCG 58.477 43.478 0.00 0.00 0.00 4.44
1467 1506 6.210584 TGTTTCCTATGAAAATCCTCCAAACC 59.789 38.462 0.00 0.00 41.92 3.27
1468 1507 7.090808 GTGTTTCCTATGAAAATCCTCCAAAC 58.909 38.462 0.00 0.00 41.92 2.93
1469 1508 6.780031 TGTGTTTCCTATGAAAATCCTCCAAA 59.220 34.615 0.00 0.00 41.92 3.28
1470 1509 6.310941 TGTGTTTCCTATGAAAATCCTCCAA 58.689 36.000 0.00 0.00 41.92 3.53
1471 1510 5.886609 TGTGTTTCCTATGAAAATCCTCCA 58.113 37.500 0.00 0.00 41.92 3.86
1472 1511 7.229506 CCTATGTGTTTCCTATGAAAATCCTCC 59.770 40.741 0.00 0.00 41.92 4.30
1473 1512 7.993183 TCCTATGTGTTTCCTATGAAAATCCTC 59.007 37.037 0.00 0.00 41.92 3.71
1474 1513 7.872138 TCCTATGTGTTTCCTATGAAAATCCT 58.128 34.615 0.00 0.00 41.92 3.24
1475 1514 8.406297 GTTCCTATGTGTTTCCTATGAAAATCC 58.594 37.037 0.00 0.00 41.92 3.01
1476 1515 8.956426 TGTTCCTATGTGTTTCCTATGAAAATC 58.044 33.333 0.00 0.00 41.92 2.17
1477 1516 8.877864 TGTTCCTATGTGTTTCCTATGAAAAT 57.122 30.769 0.00 0.00 41.92 1.82
1478 1517 8.698973 TTGTTCCTATGTGTTTCCTATGAAAA 57.301 30.769 0.00 0.00 41.92 2.29
1479 1518 7.393234 CCTTGTTCCTATGTGTTTCCTATGAAA 59.607 37.037 0.00 0.00 38.14 2.69
1480 1519 6.884295 CCTTGTTCCTATGTGTTTCCTATGAA 59.116 38.462 0.00 0.00 0.00 2.57
1481 1520 6.214615 TCCTTGTTCCTATGTGTTTCCTATGA 59.785 38.462 0.00 0.00 0.00 2.15
1482 1521 6.414732 TCCTTGTTCCTATGTGTTTCCTATG 58.585 40.000 0.00 0.00 0.00 2.23
1483 1522 6.636454 TCCTTGTTCCTATGTGTTTCCTAT 57.364 37.500 0.00 0.00 0.00 2.57
1484 1523 6.636454 ATCCTTGTTCCTATGTGTTTCCTA 57.364 37.500 0.00 0.00 0.00 2.94
1485 1524 4.993705 TCCTTGTTCCTATGTGTTTCCT 57.006 40.909 0.00 0.00 0.00 3.36
1486 1525 5.125578 GGAATCCTTGTTCCTATGTGTTTCC 59.874 44.000 0.00 0.00 43.49 3.13
1487 1526 5.710099 TGGAATCCTTGTTCCTATGTGTTTC 59.290 40.000 0.00 0.00 46.32 2.78
1488 1527 5.640147 TGGAATCCTTGTTCCTATGTGTTT 58.360 37.500 0.00 0.00 46.32 2.83
1489 1528 5.014123 TCTGGAATCCTTGTTCCTATGTGTT 59.986 40.000 0.00 0.00 46.32 3.32
1490 1529 4.536090 TCTGGAATCCTTGTTCCTATGTGT 59.464 41.667 0.00 0.00 46.32 3.72
1491 1530 5.102953 TCTGGAATCCTTGTTCCTATGTG 57.897 43.478 0.00 0.00 46.32 3.21
1492 1531 4.164988 CCTCTGGAATCCTTGTTCCTATGT 59.835 45.833 0.00 0.00 46.32 2.29
1493 1532 4.410228 TCCTCTGGAATCCTTGTTCCTATG 59.590 45.833 0.00 0.00 46.32 2.23
1494 1533 4.635473 TCCTCTGGAATCCTTGTTCCTAT 58.365 43.478 0.00 0.00 46.32 2.57
1495 1534 4.074799 TCCTCTGGAATCCTTGTTCCTA 57.925 45.455 0.00 0.00 46.32 2.94
1496 1535 2.921221 TCCTCTGGAATCCTTGTTCCT 58.079 47.619 0.00 0.00 46.32 3.36
1497 1536 3.721087 TTCCTCTGGAATCCTTGTTCC 57.279 47.619 0.00 0.00 46.35 3.62
1498 1537 6.596309 AATTTTCCTCTGGAATCCTTGTTC 57.404 37.500 0.00 0.00 41.71 3.18
1499 1538 6.014242 GGAAATTTTCCTCTGGAATCCTTGTT 60.014 38.462 19.01 0.00 46.57 2.83
1500 1539 5.481824 GGAAATTTTCCTCTGGAATCCTTGT 59.518 40.000 19.01 0.00 46.57 3.16
1501 1540 5.970592 GGAAATTTTCCTCTGGAATCCTTG 58.029 41.667 19.01 0.00 46.57 3.61
1515 1554 7.875971 ACCGAATGCATCTATAGGAAATTTTC 58.124 34.615 0.00 0.24 0.00 2.29
1516 1555 7.823745 ACCGAATGCATCTATAGGAAATTTT 57.176 32.000 0.00 0.00 0.00 1.82
1517 1556 7.823745 AACCGAATGCATCTATAGGAAATTT 57.176 32.000 0.00 0.00 0.00 1.82
1518 1557 7.285401 ACAAACCGAATGCATCTATAGGAAATT 59.715 33.333 0.00 0.00 0.00 1.82
1519 1558 6.772716 ACAAACCGAATGCATCTATAGGAAAT 59.227 34.615 0.00 0.00 0.00 2.17
1520 1559 6.119536 ACAAACCGAATGCATCTATAGGAAA 58.880 36.000 0.00 0.00 0.00 3.13
1521 1560 5.680619 ACAAACCGAATGCATCTATAGGAA 58.319 37.500 0.00 0.00 0.00 3.36
1522 1561 5.290493 ACAAACCGAATGCATCTATAGGA 57.710 39.130 0.00 0.00 0.00 2.94
1523 1562 5.639506 CCTACAAACCGAATGCATCTATAGG 59.360 44.000 0.00 1.96 0.00 2.57
1524 1563 6.455647 TCCTACAAACCGAATGCATCTATAG 58.544 40.000 0.00 0.00 0.00 1.31
1525 1564 6.413783 TCCTACAAACCGAATGCATCTATA 57.586 37.500 0.00 0.00 0.00 1.31
1526 1565 5.290493 TCCTACAAACCGAATGCATCTAT 57.710 39.130 0.00 0.00 0.00 1.98
1527 1566 4.746535 TCCTACAAACCGAATGCATCTA 57.253 40.909 0.00 0.00 0.00 1.98
1528 1567 3.627395 TCCTACAAACCGAATGCATCT 57.373 42.857 0.00 0.00 0.00 2.90
1529 1568 4.695217 TTTCCTACAAACCGAATGCATC 57.305 40.909 0.00 0.00 0.00 3.91
1530 1569 4.462483 ACATTTCCTACAAACCGAATGCAT 59.538 37.500 0.00 0.00 0.00 3.96
1531 1570 3.823873 ACATTTCCTACAAACCGAATGCA 59.176 39.130 0.00 0.00 0.00 3.96
1532 1571 4.165779 CACATTTCCTACAAACCGAATGC 58.834 43.478 0.00 0.00 0.00 3.56
1533 1572 5.371115 ACACATTTCCTACAAACCGAATG 57.629 39.130 0.00 0.00 0.00 2.67
1534 1573 5.998981 TGTACACATTTCCTACAAACCGAAT 59.001 36.000 0.00 0.00 0.00 3.34
1535 1574 5.366460 TGTACACATTTCCTACAAACCGAA 58.634 37.500 0.00 0.00 0.00 4.30
1536 1575 4.958509 TGTACACATTTCCTACAAACCGA 58.041 39.130 0.00 0.00 0.00 4.69
1537 1576 4.992319 TCTGTACACATTTCCTACAAACCG 59.008 41.667 0.00 0.00 0.00 4.44
1538 1577 6.870971 TTCTGTACACATTTCCTACAAACC 57.129 37.500 0.00 0.00 0.00 3.27
1541 1580 9.093970 CGATATTTCTGTACACATTTCCTACAA 57.906 33.333 0.00 0.00 0.00 2.41
1542 1581 8.255206 ACGATATTTCTGTACACATTTCCTACA 58.745 33.333 0.00 0.00 0.00 2.74
1543 1582 8.644318 ACGATATTTCTGTACACATTTCCTAC 57.356 34.615 0.00 0.00 0.00 3.18
1544 1583 9.961265 CTACGATATTTCTGTACACATTTCCTA 57.039 33.333 0.00 0.00 0.00 2.94
1545 1584 7.926555 CCTACGATATTTCTGTACACATTTCCT 59.073 37.037 0.00 0.00 0.00 3.36
1546 1585 7.924412 TCCTACGATATTTCTGTACACATTTCC 59.076 37.037 0.00 0.00 0.00 3.13
1547 1586 8.867112 TCCTACGATATTTCTGTACACATTTC 57.133 34.615 0.00 0.00 0.00 2.17
1548 1587 9.832445 ATTCCTACGATATTTCTGTACACATTT 57.168 29.630 0.00 0.00 0.00 2.32
1550 1589 9.909644 GTATTCCTACGATATTTCTGTACACAT 57.090 33.333 0.00 0.00 0.00 3.21
1551 1590 9.128404 AGTATTCCTACGATATTTCTGTACACA 57.872 33.333 0.00 0.00 32.82 3.72
1573 1612 9.753674 TCCAAAAACAGAGGAAATGAATAGTAT 57.246 29.630 0.00 0.00 0.00 2.12
1574 1613 9.231297 CTCCAAAAACAGAGGAAATGAATAGTA 57.769 33.333 0.00 0.00 0.00 1.82
1575 1614 8.115490 CTCCAAAAACAGAGGAAATGAATAGT 57.885 34.615 0.00 0.00 0.00 2.12
1588 1627 8.966868 GGATGTATAATTTCCTCCAAAAACAGA 58.033 33.333 0.00 0.00 0.00 3.41
1589 1628 8.748412 TGGATGTATAATTTCCTCCAAAAACAG 58.252 33.333 0.00 0.00 30.15 3.16
1590 1629 8.527810 GTGGATGTATAATTTCCTCCAAAAACA 58.472 33.333 0.00 0.00 34.75 2.83
1591 1630 8.749354 AGTGGATGTATAATTTCCTCCAAAAAC 58.251 33.333 0.00 0.00 34.75 2.43
1592 1631 8.893563 AGTGGATGTATAATTTCCTCCAAAAA 57.106 30.769 0.00 0.00 34.75 1.94
1593 1632 8.112822 TGAGTGGATGTATAATTTCCTCCAAAA 58.887 33.333 0.00 0.00 34.75 2.44
1594 1633 7.638444 TGAGTGGATGTATAATTTCCTCCAAA 58.362 34.615 0.00 0.00 34.75 3.28
1595 1634 7.206789 TGAGTGGATGTATAATTTCCTCCAA 57.793 36.000 0.00 0.00 34.75 3.53
1596 1635 6.823286 TGAGTGGATGTATAATTTCCTCCA 57.177 37.500 0.00 0.00 0.00 3.86
1597 1636 7.255277 GCTTTGAGTGGATGTATAATTTCCTCC 60.255 40.741 0.00 0.00 0.00 4.30
1598 1637 7.500559 AGCTTTGAGTGGATGTATAATTTCCTC 59.499 37.037 0.00 0.00 0.00 3.71
1599 1638 7.349598 AGCTTTGAGTGGATGTATAATTTCCT 58.650 34.615 0.00 0.00 0.00 3.36
1600 1639 7.283127 TGAGCTTTGAGTGGATGTATAATTTCC 59.717 37.037 0.00 0.00 0.00 3.13
1601 1640 8.213518 TGAGCTTTGAGTGGATGTATAATTTC 57.786 34.615 0.00 0.00 0.00 2.17
1602 1641 8.757982 ATGAGCTTTGAGTGGATGTATAATTT 57.242 30.769 0.00 0.00 0.00 1.82
1603 1642 8.757982 AATGAGCTTTGAGTGGATGTATAATT 57.242 30.769 0.00 0.00 0.00 1.40
1604 1643 8.757982 AAATGAGCTTTGAGTGGATGTATAAT 57.242 30.769 0.00 0.00 0.00 1.28
1605 1644 8.579850 AAAATGAGCTTTGAGTGGATGTATAA 57.420 30.769 0.00 0.00 0.00 0.98
1606 1645 9.109393 GTAAAATGAGCTTTGAGTGGATGTATA 57.891 33.333 0.00 0.00 0.00 1.47
1607 1646 7.201644 CGTAAAATGAGCTTTGAGTGGATGTAT 60.202 37.037 0.00 0.00 0.00 2.29
1608 1647 6.092122 CGTAAAATGAGCTTTGAGTGGATGTA 59.908 38.462 0.00 0.00 0.00 2.29
1609 1648 5.106555 CGTAAAATGAGCTTTGAGTGGATGT 60.107 40.000 0.00 0.00 0.00 3.06
1610 1649 5.327091 CGTAAAATGAGCTTTGAGTGGATG 58.673 41.667 0.00 0.00 0.00 3.51
1611 1650 4.142600 GCGTAAAATGAGCTTTGAGTGGAT 60.143 41.667 0.00 0.00 0.00 3.41
1612 1651 3.188460 GCGTAAAATGAGCTTTGAGTGGA 59.812 43.478 0.00 0.00 0.00 4.02
1613 1652 3.492313 GCGTAAAATGAGCTTTGAGTGG 58.508 45.455 0.00 0.00 0.00 4.00
1614 1653 3.155998 CGCGTAAAATGAGCTTTGAGTG 58.844 45.455 0.00 0.00 0.00 3.51
1615 1654 2.806244 ACGCGTAAAATGAGCTTTGAGT 59.194 40.909 11.67 0.00 0.00 3.41
1616 1655 3.455619 ACGCGTAAAATGAGCTTTGAG 57.544 42.857 11.67 0.00 0.00 3.02
1617 1656 3.369756 CCTACGCGTAAAATGAGCTTTGA 59.630 43.478 20.97 0.00 0.00 2.69
1618 1657 3.369756 TCCTACGCGTAAAATGAGCTTTG 59.630 43.478 20.97 3.65 0.00 2.77
1619 1658 3.592059 TCCTACGCGTAAAATGAGCTTT 58.408 40.909 20.97 0.00 0.00 3.51
1620 1659 3.241067 TCCTACGCGTAAAATGAGCTT 57.759 42.857 20.97 0.00 0.00 3.74
1621 1660 2.928116 GTTCCTACGCGTAAAATGAGCT 59.072 45.455 20.97 0.00 0.00 4.09
1622 1661 2.284855 CGTTCCTACGCGTAAAATGAGC 60.285 50.000 20.97 14.10 41.41 4.26
1623 1662 3.548216 CGTTCCTACGCGTAAAATGAG 57.452 47.619 20.97 9.01 41.41 2.90
1635 1674 0.524862 TTGACTCGCCTCGTTCCTAC 59.475 55.000 0.00 0.00 0.00 3.18
1636 1675 1.250328 TTTGACTCGCCTCGTTCCTA 58.750 50.000 0.00 0.00 0.00 2.94
1637 1676 0.608640 ATTTGACTCGCCTCGTTCCT 59.391 50.000 0.00 0.00 0.00 3.36
1638 1677 1.000145 GATTTGACTCGCCTCGTTCC 59.000 55.000 0.00 0.00 0.00 3.62
1639 1678 1.000145 GGATTTGACTCGCCTCGTTC 59.000 55.000 0.00 0.00 0.00 3.95
1640 1679 0.608640 AGGATTTGACTCGCCTCGTT 59.391 50.000 0.00 0.00 0.00 3.85
1641 1680 0.608640 AAGGATTTGACTCGCCTCGT 59.391 50.000 0.00 0.00 0.00 4.18
1642 1681 2.579207 TAAGGATTTGACTCGCCTCG 57.421 50.000 0.00 0.00 0.00 4.63
1643 1682 4.124851 TCTTAAGGATTTGACTCGCCTC 57.875 45.455 1.85 0.00 0.00 4.70
1644 1683 4.446371 CATCTTAAGGATTTGACTCGCCT 58.554 43.478 1.85 0.00 31.27 5.52
1645 1684 3.561725 CCATCTTAAGGATTTGACTCGCC 59.438 47.826 1.85 0.00 31.27 5.54
1646 1685 3.002759 GCCATCTTAAGGATTTGACTCGC 59.997 47.826 1.85 0.00 31.27 5.03
1647 1686 4.191544 TGCCATCTTAAGGATTTGACTCG 58.808 43.478 1.85 0.00 31.27 4.18
1648 1687 5.649831 ACTTGCCATCTTAAGGATTTGACTC 59.350 40.000 1.85 0.00 31.27 3.36
1649 1688 5.416952 CACTTGCCATCTTAAGGATTTGACT 59.583 40.000 1.85 0.00 31.27 3.41
1650 1689 5.644644 CACTTGCCATCTTAAGGATTTGAC 58.355 41.667 1.85 0.00 31.27 3.18
1651 1690 4.158394 GCACTTGCCATCTTAAGGATTTGA 59.842 41.667 1.85 0.00 31.27 2.69
1652 1691 4.427312 GCACTTGCCATCTTAAGGATTTG 58.573 43.478 1.85 0.00 31.27 2.32
1653 1692 4.725790 GCACTTGCCATCTTAAGGATTT 57.274 40.909 1.85 0.00 31.27 2.17
1667 1706 4.354587 GAACTTTATAGCATGGCACTTGC 58.645 43.478 4.93 4.93 40.45 4.01
1668 1707 4.641989 AGGAACTTTATAGCATGGCACTTG 59.358 41.667 0.00 0.00 27.25 3.16
1669 1708 4.860022 AGGAACTTTATAGCATGGCACTT 58.140 39.130 0.00 0.00 27.25 3.16
1670 1709 4.510167 AGGAACTTTATAGCATGGCACT 57.490 40.909 0.00 0.00 27.25 4.40
1671 1710 7.979444 TTATAGGAACTTTATAGCATGGCAC 57.021 36.000 0.00 0.00 41.75 5.01
1672 1711 9.890629 CTATTATAGGAACTTTATAGCATGGCA 57.109 33.333 0.00 0.00 41.75 4.92
1673 1712 9.892130 ACTATTATAGGAACTTTATAGCATGGC 57.108 33.333 4.15 0.00 41.75 4.40
1703 1742 9.713684 TTTGGAGGATTTCATAATGTAGGAATT 57.286 29.630 0.00 0.00 0.00 2.17
1704 1743 9.136323 GTTTGGAGGATTTCATAATGTAGGAAT 57.864 33.333 0.00 0.00 0.00 3.01
1705 1744 7.559897 GGTTTGGAGGATTTCATAATGTAGGAA 59.440 37.037 0.00 0.00 0.00 3.36
1706 1745 7.060421 GGTTTGGAGGATTTCATAATGTAGGA 58.940 38.462 0.00 0.00 0.00 2.94
1707 1746 6.017109 CGGTTTGGAGGATTTCATAATGTAGG 60.017 42.308 0.00 0.00 0.00 3.18
1708 1747 6.765989 TCGGTTTGGAGGATTTCATAATGTAG 59.234 38.462 0.00 0.00 0.00 2.74
1709 1748 6.654959 TCGGTTTGGAGGATTTCATAATGTA 58.345 36.000 0.00 0.00 0.00 2.29
1710 1749 5.505780 TCGGTTTGGAGGATTTCATAATGT 58.494 37.500 0.00 0.00 0.00 2.71
1711 1750 6.449635 TTCGGTTTGGAGGATTTCATAATG 57.550 37.500 0.00 0.00 0.00 1.90
1712 1751 6.833416 TCATTCGGTTTGGAGGATTTCATAAT 59.167 34.615 0.00 0.00 0.00 1.28
1713 1752 6.184068 TCATTCGGTTTGGAGGATTTCATAA 58.816 36.000 0.00 0.00 0.00 1.90
1714 1753 5.750524 TCATTCGGTTTGGAGGATTTCATA 58.249 37.500 0.00 0.00 0.00 2.15
1715 1754 4.599041 TCATTCGGTTTGGAGGATTTCAT 58.401 39.130 0.00 0.00 0.00 2.57
1716 1755 4.009675 CTCATTCGGTTTGGAGGATTTCA 58.990 43.478 0.00 0.00 0.00 2.69
1717 1756 3.181496 GCTCATTCGGTTTGGAGGATTTC 60.181 47.826 0.00 0.00 0.00 2.17
1718 1757 2.755103 GCTCATTCGGTTTGGAGGATTT 59.245 45.455 0.00 0.00 0.00 2.17
1719 1758 2.369394 GCTCATTCGGTTTGGAGGATT 58.631 47.619 0.00 0.00 0.00 3.01
1720 1759 1.408822 GGCTCATTCGGTTTGGAGGAT 60.409 52.381 0.00 0.00 0.00 3.24
1721 1760 0.035439 GGCTCATTCGGTTTGGAGGA 60.035 55.000 0.00 0.00 0.00 3.71
1722 1761 1.032114 GGGCTCATTCGGTTTGGAGG 61.032 60.000 0.00 0.00 0.00 4.30
1723 1762 0.035056 AGGGCTCATTCGGTTTGGAG 60.035 55.000 0.00 0.00 0.00 3.86
1724 1763 0.404040 AAGGGCTCATTCGGTTTGGA 59.596 50.000 0.00 0.00 0.00 3.53
1725 1764 2.017049 CTAAGGGCTCATTCGGTTTGG 58.983 52.381 0.00 0.00 0.00 3.28
1726 1765 2.985896 TCTAAGGGCTCATTCGGTTTG 58.014 47.619 0.00 0.00 0.00 2.93
1727 1766 3.610911 CTTCTAAGGGCTCATTCGGTTT 58.389 45.455 0.00 0.00 0.00 3.27
1728 1767 2.092914 CCTTCTAAGGGCTCATTCGGTT 60.093 50.000 0.42 0.00 42.66 4.44
1729 1768 1.486726 CCTTCTAAGGGCTCATTCGGT 59.513 52.381 0.42 0.00 42.66 4.69
1730 1769 1.811941 GCCTTCTAAGGGCTCATTCGG 60.812 57.143 10.69 0.00 46.56 4.30
1731 1770 1.587547 GCCTTCTAAGGGCTCATTCG 58.412 55.000 10.69 0.00 46.56 3.34
1738 1777 2.570135 CATCTCTTGCCTTCTAAGGGC 58.430 52.381 10.69 0.64 46.56 5.19
1739 1778 2.158696 CCCATCTCTTGCCTTCTAAGGG 60.159 54.545 10.69 0.00 46.56 3.95
1741 1780 3.198635 TGACCCATCTCTTGCCTTCTAAG 59.801 47.826 0.00 0.00 0.00 2.18
1742 1781 3.181329 TGACCCATCTCTTGCCTTCTAA 58.819 45.455 0.00 0.00 0.00 2.10
1743 1782 2.832838 TGACCCATCTCTTGCCTTCTA 58.167 47.619 0.00 0.00 0.00 2.10
1744 1783 1.661463 TGACCCATCTCTTGCCTTCT 58.339 50.000 0.00 0.00 0.00 2.85
1745 1784 2.496899 TTGACCCATCTCTTGCCTTC 57.503 50.000 0.00 0.00 0.00 3.46
1788 1827 2.176045 TCCTCCACACGTACATCACAT 58.824 47.619 0.00 0.00 0.00 3.21
1793 1832 1.975680 ACCTTTCCTCCACACGTACAT 59.024 47.619 0.00 0.00 0.00 2.29
2121 2162 2.446848 CGCTGGATGAGATGGGGGT 61.447 63.158 0.00 0.00 0.00 4.95
2128 2169 4.212913 GCCTCGCGCTGGATGAGA 62.213 66.667 19.52 0.00 31.31 3.27
2218 2260 2.694760 CGGCCAGCTTTTCTGAGCC 61.695 63.158 2.24 11.72 46.61 4.70
2276 2320 4.864334 CGAGCAGTGGGATGGGCC 62.864 72.222 0.00 0.00 0.00 5.80
2307 2351 2.276116 GCTCGACCTCCTCACACCA 61.276 63.158 0.00 0.00 0.00 4.17
2310 2355 1.251527 GGAAGCTCGACCTCCTCACA 61.252 60.000 0.00 0.00 0.00 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.