Multiple sequence alignment - TraesCS2A01G392100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G392100 chr2A 100.000 5951 0 0 1 5951 642229116 642223166 0.000000e+00 10990.0
1 TraesCS2A01G392100 chr2A 97.432 701 17 1 5251 5951 729063340 729062641 0.000000e+00 1194.0
2 TraesCS2A01G392100 chr2A 88.043 92 9 2 3282 3372 753749235 753749325 2.270000e-19 108.0
3 TraesCS2A01G392100 chr2A 95.122 41 2 0 123 163 692032242 692032282 1.380000e-06 65.8
4 TraesCS2A01G392100 chr2B 88.707 3781 247 76 562 4260 583792287 583788605 0.000000e+00 4451.0
5 TraesCS2A01G392100 chr2B 88.271 989 72 19 4269 5250 583788623 583787672 0.000000e+00 1144.0
6 TraesCS2A01G392100 chr2B 91.473 387 24 4 144 527 126946408 126946788 1.900000e-144 523.0
7 TraesCS2A01G392100 chr2B 84.615 65 10 0 3291 3355 785901876 785901940 1.380000e-06 65.8
8 TraesCS2A01G392100 chr2D 94.745 1332 47 14 562 1883 497926726 497925408 0.000000e+00 2050.0
9 TraesCS2A01G392100 chr2D 91.213 1468 81 24 1877 3318 497925377 497923932 0.000000e+00 1953.0
10 TraesCS2A01G392100 chr2D 90.837 884 47 9 3405 4260 497923912 497923035 0.000000e+00 1153.0
11 TraesCS2A01G392100 chr2D 95.546 696 18 5 4269 4960 497923053 497922367 0.000000e+00 1101.0
12 TraesCS2A01G392100 chr2D 86.257 342 24 5 4912 5249 497922367 497922045 3.410000e-92 350.0
13 TraesCS2A01G392100 chr5A 98.288 701 12 0 5251 5951 552944884 552945584 0.000000e+00 1229.0
14 TraesCS2A01G392100 chr5A 78.027 223 41 6 4275 4489 445133902 445134124 3.740000e-27 134.0
15 TraesCS2A01G392100 chr3A 96.165 704 20 3 5248 5951 573346763 573347459 0.000000e+00 1144.0
16 TraesCS2A01G392100 chr3A 91.311 702 60 1 5251 5951 742795840 742795139 0.000000e+00 957.0
17 TraesCS2A01G392100 chr3A 89.664 387 31 3 144 527 711070492 711070872 8.970000e-133 484.0
18 TraesCS2A01G392100 chr7D 92.582 701 52 0 5251 5951 169441946 169442646 0.000000e+00 1007.0
19 TraesCS2A01G392100 chr4B 91.726 701 58 0 5251 5951 495132465 495131765 0.000000e+00 974.0
20 TraesCS2A01G392100 chr4B 96.491 57 1 1 2038 2093 184417383 184417327 6.350000e-15 93.5
21 TraesCS2A01G392100 chr4B 95.455 44 2 0 120 163 602238580 602238623 2.980000e-08 71.3
22 TraesCS2A01G392100 chr4B 90.909 44 3 1 3871 3914 26830131 26830173 2.320000e-04 58.4
23 TraesCS2A01G392100 chrUn 91.810 696 57 0 5251 5946 91668151 91667456 0.000000e+00 970.0
24 TraesCS2A01G392100 chr7B 91.595 702 57 2 5251 5951 495719627 495718927 0.000000e+00 968.0
25 TraesCS2A01G392100 chr7B 90.355 394 27 6 144 533 688592687 688592301 1.910000e-139 507.0
26 TraesCS2A01G392100 chr7B 90.196 51 3 2 116 165 688592749 688592700 1.380000e-06 65.8
27 TraesCS2A01G392100 chr7B 100.000 30 0 0 3281 3310 699167095 699167066 8.330000e-04 56.5
28 TraesCS2A01G392100 chr6B 90.896 714 64 1 5238 5951 626643018 626642306 0.000000e+00 957.0
29 TraesCS2A01G392100 chr6B 92.053 151 11 1 1598 1748 508940101 508940250 1.680000e-50 211.0
30 TraesCS2A01G392100 chr6B 95.455 44 2 0 120 163 65005366 65005323 2.980000e-08 71.3
31 TraesCS2A01G392100 chr6B 91.667 48 3 1 113 160 439967506 439967552 1.380000e-06 65.8
32 TraesCS2A01G392100 chr7A 91.127 417 25 8 123 527 32625906 32625490 6.740000e-154 555.0
33 TraesCS2A01G392100 chr7A 91.436 397 20 8 144 527 399518612 399518217 3.160000e-147 532.0
34 TraesCS2A01G392100 chr7A 91.192 386 26 3 144 527 108946848 108947227 8.840000e-143 518.0
35 TraesCS2A01G392100 chr7A 86.813 182 12 4 358 527 572191748 572191929 6.090000e-45 193.0
36 TraesCS2A01G392100 chr3B 90.955 398 22 7 144 527 248248079 248247682 1.900000e-144 523.0
37 TraesCS2A01G392100 chr1D 89.810 422 19 9 123 527 438366730 438367144 2.460000e-143 520.0
38 TraesCS2A01G392100 chr1D 78.140 215 37 7 4275 4481 145941770 145941558 1.740000e-25 128.0
39 TraesCS2A01G392100 chr1D 95.455 44 2 0 120 163 304332779 304332822 2.980000e-08 71.3
40 TraesCS2A01G392100 chr4A 89.896 386 31 5 144 527 102798767 102799146 1.930000e-134 490.0
41 TraesCS2A01G392100 chr1A 89.595 346 20 5 200 532 517928996 517929338 5.510000e-115 425.0
42 TraesCS2A01G392100 chr1A 78.972 214 36 7 4275 4481 143819297 143819086 2.890000e-28 137.0
43 TraesCS2A01G392100 chr1A 87.654 81 9 1 3296 3376 91479072 91478993 6.350000e-15 93.5
44 TraesCS2A01G392100 chr6D 92.053 151 11 1 1598 1748 315959111 315958962 1.680000e-50 211.0
45 TraesCS2A01G392100 chr6A 90.728 151 13 1 1598 1748 453827147 453826998 3.640000e-47 200.0
46 TraesCS2A01G392100 chr5D 77.714 175 31 8 3214 3384 560109333 560109503 3.790000e-17 100.0
47 TraesCS2A01G392100 chr1B 75.814 215 39 10 4275 4481 194793566 194793357 4.910000e-16 97.1
48 TraesCS2A01G392100 chr3D 80.909 110 20 1 3279 3388 341501845 341501737 1.060000e-12 86.1
49 TraesCS2A01G392100 chr5B 95.455 44 2 0 120 163 623755282 623755325 2.980000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G392100 chr2A 642223166 642229116 5950 True 10990.0 10990 100.0000 1 5951 1 chr2A.!!$R1 5950
1 TraesCS2A01G392100 chr2A 729062641 729063340 699 True 1194.0 1194 97.4320 5251 5951 1 chr2A.!!$R2 700
2 TraesCS2A01G392100 chr2B 583787672 583792287 4615 True 2797.5 4451 88.4890 562 5250 2 chr2B.!!$R1 4688
3 TraesCS2A01G392100 chr2D 497922045 497926726 4681 True 1321.4 2050 91.7196 562 5249 5 chr2D.!!$R1 4687
4 TraesCS2A01G392100 chr5A 552944884 552945584 700 False 1229.0 1229 98.2880 5251 5951 1 chr5A.!!$F2 700
5 TraesCS2A01G392100 chr3A 573346763 573347459 696 False 1144.0 1144 96.1650 5248 5951 1 chr3A.!!$F1 703
6 TraesCS2A01G392100 chr3A 742795139 742795840 701 True 957.0 957 91.3110 5251 5951 1 chr3A.!!$R1 700
7 TraesCS2A01G392100 chr7D 169441946 169442646 700 False 1007.0 1007 92.5820 5251 5951 1 chr7D.!!$F1 700
8 TraesCS2A01G392100 chr4B 495131765 495132465 700 True 974.0 974 91.7260 5251 5951 1 chr4B.!!$R2 700
9 TraesCS2A01G392100 chrUn 91667456 91668151 695 True 970.0 970 91.8100 5251 5946 1 chrUn.!!$R1 695
10 TraesCS2A01G392100 chr7B 495718927 495719627 700 True 968.0 968 91.5950 5251 5951 1 chr7B.!!$R1 700
11 TraesCS2A01G392100 chr6B 626642306 626643018 712 True 957.0 957 90.8960 5238 5951 1 chr6B.!!$R2 713

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 278 0.028110 GGCACGTTTAGCATGCTAGC 59.972 55.000 25.56 23.32 39.38 3.42 F
278 279 0.028110 GCACGTTTAGCATGCTAGCC 59.972 55.000 25.56 18.61 36.40 3.93 F
456 457 0.104487 GGACCTAGCCCGTTTAGCTC 59.896 60.000 0.00 0.00 41.83 4.09 F
967 976 0.105039 CCCCAAGCTAAGCTAGGTCG 59.895 60.000 0.00 0.00 38.25 4.79 F
968 977 0.530870 CCCAAGCTAAGCTAGGTCGC 60.531 60.000 7.80 7.80 38.25 5.19 F
969 978 0.872021 CCAAGCTAAGCTAGGTCGCG 60.872 60.000 0.00 0.00 38.25 5.87 F
1329 1340 0.950836 TGTCGCATGGTGTTTCTTGG 59.049 50.000 0.00 0.00 0.00 3.61 F
1568 1583 1.141053 GGGACTGATGGGTATGGTGAC 59.859 57.143 0.00 0.00 0.00 3.67 F
3212 3298 1.085091 GCTCGGCATGGATCATCATC 58.915 55.000 0.00 0.00 0.00 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2096 2162 0.106719 CCTCCTGTGTGGTTTGTGGT 60.107 55.000 0.00 0.0 37.07 4.16 R
2097 2163 0.182537 TCCTCCTGTGTGGTTTGTGG 59.817 55.000 0.00 0.0 37.07 4.17 R
2401 2470 1.453197 CCTATGGTTTGACCCCCGC 60.453 63.158 0.00 0.0 37.50 6.13 R
2608 2677 1.520342 GTGGAGTGAGCGGAGATGC 60.520 63.158 0.00 0.0 0.00 3.91 R
2729 2799 2.805671 TCGACACAACGATGCTTCATTT 59.194 40.909 0.08 0.0 37.37 2.32 R
2914 2994 4.751767 TTTCACAGAATTTTGGCAACCT 57.248 36.364 0.00 0.0 0.00 3.50 R
3076 3157 0.037232 AACAGCCAAGAGCCGTCTAC 60.037 55.000 0.00 0.0 45.47 2.59 R
3265 3378 0.038166 ACACAAAGGATCATGCCCGT 59.962 50.000 0.00 0.0 0.00 5.28 R
5163 5400 0.178068 TGAGAGGCCGAATTAGCACC 59.822 55.000 0.00 0.0 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.973206 ATATTGACACCTTCGTCACCA 57.027 42.857 0.00 0.00 45.36 4.17
21 22 1.878953 ATTGACACCTTCGTCACCAC 58.121 50.000 0.00 0.00 45.36 4.16
22 23 0.179067 TTGACACCTTCGTCACCACC 60.179 55.000 0.00 0.00 45.36 4.61
23 24 1.331399 TGACACCTTCGTCACCACCA 61.331 55.000 0.00 0.00 40.94 4.17
24 25 0.179067 GACACCTTCGTCACCACCAA 60.179 55.000 0.00 0.00 35.88 3.67
25 26 0.472471 ACACCTTCGTCACCACCAAT 59.528 50.000 0.00 0.00 0.00 3.16
26 27 0.874390 CACCTTCGTCACCACCAATG 59.126 55.000 0.00 0.00 0.00 2.82
36 37 2.825836 CACCAATGGAGCTCCGCC 60.826 66.667 27.43 5.54 39.43 6.13
37 38 3.329889 ACCAATGGAGCTCCGCCA 61.330 61.111 27.43 11.90 37.78 5.69
38 39 2.825836 CCAATGGAGCTCCGCCAC 60.826 66.667 27.43 4.01 35.91 5.01
39 40 2.046023 CAATGGAGCTCCGCCACA 60.046 61.111 27.43 10.38 35.91 4.17
40 41 1.452651 CAATGGAGCTCCGCCACAT 60.453 57.895 27.43 12.39 35.91 3.21
41 42 0.179048 CAATGGAGCTCCGCCACATA 60.179 55.000 27.43 8.79 35.91 2.29
42 43 0.546122 AATGGAGCTCCGCCACATAA 59.454 50.000 27.43 7.99 35.91 1.90
43 44 0.179045 ATGGAGCTCCGCCACATAAC 60.179 55.000 27.43 0.11 35.91 1.89
44 45 1.264749 TGGAGCTCCGCCACATAACT 61.265 55.000 27.43 0.00 39.43 2.24
45 46 0.530870 GGAGCTCCGCCACATAACTC 60.531 60.000 19.06 0.00 0.00 3.01
46 47 0.461961 GAGCTCCGCCACATAACTCT 59.538 55.000 0.87 0.00 0.00 3.24
47 48 1.681793 GAGCTCCGCCACATAACTCTA 59.318 52.381 0.87 0.00 0.00 2.43
48 49 1.409427 AGCTCCGCCACATAACTCTAC 59.591 52.381 0.00 0.00 0.00 2.59
49 50 1.409427 GCTCCGCCACATAACTCTACT 59.591 52.381 0.00 0.00 0.00 2.57
50 51 2.799917 GCTCCGCCACATAACTCTACTG 60.800 54.545 0.00 0.00 0.00 2.74
51 52 2.688446 CTCCGCCACATAACTCTACTGA 59.312 50.000 0.00 0.00 0.00 3.41
52 53 3.093814 TCCGCCACATAACTCTACTGAA 58.906 45.455 0.00 0.00 0.00 3.02
53 54 3.512329 TCCGCCACATAACTCTACTGAAA 59.488 43.478 0.00 0.00 0.00 2.69
54 55 4.020928 TCCGCCACATAACTCTACTGAAAA 60.021 41.667 0.00 0.00 0.00 2.29
55 56 4.330074 CCGCCACATAACTCTACTGAAAAG 59.670 45.833 0.00 0.00 0.00 2.27
56 57 5.168569 CGCCACATAACTCTACTGAAAAGA 58.831 41.667 0.00 0.00 0.00 2.52
57 58 5.637810 CGCCACATAACTCTACTGAAAAGAA 59.362 40.000 0.00 0.00 0.00 2.52
58 59 6.147164 CGCCACATAACTCTACTGAAAAGAAA 59.853 38.462 0.00 0.00 0.00 2.52
59 60 7.307751 CGCCACATAACTCTACTGAAAAGAAAA 60.308 37.037 0.00 0.00 0.00 2.29
60 61 8.349983 GCCACATAACTCTACTGAAAAGAAAAA 58.650 33.333 0.00 0.00 0.00 1.94
61 62 9.665264 CCACATAACTCTACTGAAAAGAAAAAC 57.335 33.333 0.00 0.00 0.00 2.43
74 75 9.670719 CTGAAAAGAAAAACTAGAGTTTCATCC 57.329 33.333 18.58 9.56 46.47 3.51
75 76 8.342634 TGAAAAGAAAAACTAGAGTTTCATCCG 58.657 33.333 18.58 0.00 46.47 4.18
76 77 6.803154 AAGAAAAACTAGAGTTTCATCCGG 57.197 37.500 18.58 0.00 46.47 5.14
77 78 4.695928 AGAAAAACTAGAGTTTCATCCGGC 59.304 41.667 18.58 0.00 46.47 6.13
78 79 2.295253 AACTAGAGTTTCATCCGGCG 57.705 50.000 0.00 0.00 33.93 6.46
79 80 0.460311 ACTAGAGTTTCATCCGGCGG 59.540 55.000 22.51 22.51 0.00 6.13
80 81 0.744874 CTAGAGTTTCATCCGGCGGA 59.255 55.000 33.10 33.10 35.55 5.54
81 82 1.341531 CTAGAGTTTCATCCGGCGGAT 59.658 52.381 34.54 34.54 44.21 4.18
82 83 0.105039 AGAGTTTCATCCGGCGGATC 59.895 55.000 36.96 25.48 40.98 3.36
83 84 0.105039 GAGTTTCATCCGGCGGATCT 59.895 55.000 36.96 29.38 40.98 2.75
84 85 0.179073 AGTTTCATCCGGCGGATCTG 60.179 55.000 36.96 28.37 40.98 2.90
85 86 0.462047 GTTTCATCCGGCGGATCTGT 60.462 55.000 36.96 16.79 40.98 3.41
86 87 1.116308 TTTCATCCGGCGGATCTGTA 58.884 50.000 36.96 20.47 40.98 2.74
87 88 0.673985 TTCATCCGGCGGATCTGTAG 59.326 55.000 36.96 25.11 40.98 2.74
88 89 0.179001 TCATCCGGCGGATCTGTAGA 60.179 55.000 36.96 26.90 40.98 2.59
89 90 0.891373 CATCCGGCGGATCTGTAGAT 59.109 55.000 36.96 13.87 40.98 1.98
102 103 6.060028 GATCTGTAGATCGATGCCTAGATC 57.940 45.833 0.54 12.21 41.15 2.75
103 104 4.911390 TCTGTAGATCGATGCCTAGATCA 58.089 43.478 0.54 0.00 44.10 2.92
104 105 5.316987 TCTGTAGATCGATGCCTAGATCAA 58.683 41.667 0.54 0.43 44.10 2.57
105 106 5.770162 TCTGTAGATCGATGCCTAGATCAAA 59.230 40.000 0.54 0.56 44.10 2.69
106 107 6.265422 TCTGTAGATCGATGCCTAGATCAAAA 59.735 38.462 0.54 0.00 44.10 2.44
107 108 6.997655 TGTAGATCGATGCCTAGATCAAAAT 58.002 36.000 0.54 0.00 44.10 1.82
108 109 6.870439 TGTAGATCGATGCCTAGATCAAAATG 59.130 38.462 0.54 0.00 44.10 2.32
109 110 4.694509 AGATCGATGCCTAGATCAAAATGC 59.305 41.667 0.54 0.00 44.10 3.56
110 111 3.141398 TCGATGCCTAGATCAAAATGCC 58.859 45.455 0.00 0.00 0.00 4.40
111 112 2.880268 CGATGCCTAGATCAAAATGCCA 59.120 45.455 0.00 0.00 0.00 4.92
112 113 3.304257 CGATGCCTAGATCAAAATGCCAC 60.304 47.826 0.00 0.00 0.00 5.01
113 114 3.084536 TGCCTAGATCAAAATGCCACA 57.915 42.857 0.00 0.00 0.00 4.17
114 115 2.754552 TGCCTAGATCAAAATGCCACAC 59.245 45.455 0.00 0.00 0.00 3.82
115 116 2.223340 GCCTAGATCAAAATGCCACACG 60.223 50.000 0.00 0.00 0.00 4.49
116 117 3.270027 CCTAGATCAAAATGCCACACGA 58.730 45.455 0.00 0.00 0.00 4.35
117 118 3.063997 CCTAGATCAAAATGCCACACGAC 59.936 47.826 0.00 0.00 0.00 4.34
118 119 2.783135 AGATCAAAATGCCACACGACT 58.217 42.857 0.00 0.00 0.00 4.18
119 120 3.937814 AGATCAAAATGCCACACGACTA 58.062 40.909 0.00 0.00 0.00 2.59
120 121 4.323417 AGATCAAAATGCCACACGACTAA 58.677 39.130 0.00 0.00 0.00 2.24
121 122 3.889196 TCAAAATGCCACACGACTAAC 57.111 42.857 0.00 0.00 0.00 2.34
122 123 2.550606 TCAAAATGCCACACGACTAACC 59.449 45.455 0.00 0.00 0.00 2.85
123 124 2.264005 AAATGCCACACGACTAACCA 57.736 45.000 0.00 0.00 0.00 3.67
124 125 1.808411 AATGCCACACGACTAACCAG 58.192 50.000 0.00 0.00 0.00 4.00
125 126 0.973632 ATGCCACACGACTAACCAGA 59.026 50.000 0.00 0.00 0.00 3.86
126 127 0.032952 TGCCACACGACTAACCAGAC 59.967 55.000 0.00 0.00 0.00 3.51
127 128 0.669625 GCCACACGACTAACCAGACC 60.670 60.000 0.00 0.00 0.00 3.85
128 129 0.966920 CCACACGACTAACCAGACCT 59.033 55.000 0.00 0.00 0.00 3.85
129 130 1.336887 CCACACGACTAACCAGACCTG 60.337 57.143 0.00 0.00 0.00 4.00
138 139 2.672996 CCAGACCTGGCCAAACGG 60.673 66.667 7.01 7.56 44.73 4.44
139 140 2.672996 CAGACCTGGCCAAACGGG 60.673 66.667 7.01 7.12 42.81 5.28
176 177 2.748251 CCCGCCATGGCACGTTTA 60.748 61.111 34.93 0.00 42.06 2.01
177 178 2.336478 CCCGCCATGGCACGTTTAA 61.336 57.895 34.93 0.00 42.06 1.52
178 179 1.662438 CCCGCCATGGCACGTTTAAT 61.662 55.000 34.93 0.00 42.06 1.40
179 180 1.018148 CCGCCATGGCACGTTTAATA 58.982 50.000 34.93 0.00 42.06 0.98
180 181 1.002900 CCGCCATGGCACGTTTAATAG 60.003 52.381 34.93 15.02 42.06 1.73
181 182 1.668751 CGCCATGGCACGTTTAATAGT 59.331 47.619 34.93 0.00 42.06 2.12
182 183 2.286184 CGCCATGGCACGTTTAATAGTC 60.286 50.000 34.93 1.76 42.06 2.59
183 184 2.286184 GCCATGGCACGTTTAATAGTCG 60.286 50.000 32.08 0.00 41.49 4.18
184 185 2.286833 CCATGGCACGTTTAATAGTCGG 59.713 50.000 0.00 0.00 0.00 4.79
185 186 2.012937 TGGCACGTTTAATAGTCGGG 57.987 50.000 0.00 0.00 0.00 5.14
187 188 0.654160 GCACGTTTAATAGTCGGGCC 59.346 55.000 0.00 0.00 46.28 5.80
188 189 0.925466 CACGTTTAATAGTCGGGCCG 59.075 55.000 22.51 22.51 0.00 6.13
189 190 0.532115 ACGTTTAATAGTCGGGCCGT 59.468 50.000 27.32 10.46 0.00 5.68
190 191 0.925466 CGTTTAATAGTCGGGCCGTG 59.075 55.000 27.32 0.00 0.00 4.94
191 192 1.736696 CGTTTAATAGTCGGGCCGTGT 60.737 52.381 27.32 16.60 0.00 4.49
192 193 1.929169 GTTTAATAGTCGGGCCGTGTC 59.071 52.381 27.32 17.00 0.00 3.67
193 194 0.101040 TTAATAGTCGGGCCGTGTCG 59.899 55.000 27.32 0.00 0.00 4.35
194 195 1.031571 TAATAGTCGGGCCGTGTCGT 61.032 55.000 27.32 12.28 0.00 4.34
195 196 2.552585 AATAGTCGGGCCGTGTCGTG 62.553 60.000 27.32 0.00 0.00 4.35
229 230 4.792804 GCTCTCTGGCCCAGGCAC 62.793 72.222 11.68 0.50 44.11 5.01
230 231 4.463879 CTCTCTGGCCCAGGCACG 62.464 72.222 11.68 0.35 44.11 5.34
245 246 3.349488 GGCACGGCCTGATTATTAAAC 57.651 47.619 0.00 0.00 46.69 2.01
246 247 2.286772 GGCACGGCCTGATTATTAAACG 60.287 50.000 0.00 0.00 46.69 3.60
247 248 2.286772 GCACGGCCTGATTATTAAACGG 60.287 50.000 0.00 0.00 0.00 4.44
248 249 2.289547 CACGGCCTGATTATTAAACGGG 59.710 50.000 0.00 7.09 0.00 5.28
251 252 1.265905 GCCTGATTATTAAACGGGCCG 59.734 52.381 27.06 27.06 46.61 6.13
252 253 1.877443 CCTGATTATTAAACGGGCCGG 59.123 52.381 31.78 12.53 0.00 6.13
253 254 1.265905 CTGATTATTAAACGGGCCGGC 59.734 52.381 31.78 21.18 0.00 6.13
254 255 0.594602 GATTATTAAACGGGCCGGCC 59.405 55.000 38.57 38.57 0.00 6.13
270 271 2.666862 CCCGTGGCACGTTTAGCA 60.667 61.111 34.74 0.00 40.58 3.49
271 272 2.038269 CCCGTGGCACGTTTAGCAT 61.038 57.895 34.74 0.00 40.58 3.79
272 273 1.134487 CCGTGGCACGTTTAGCATG 59.866 57.895 34.74 15.78 40.58 4.06
273 274 1.511887 CGTGGCACGTTTAGCATGC 60.512 57.895 30.56 10.51 36.74 4.06
274 275 1.875963 GTGGCACGTTTAGCATGCT 59.124 52.632 25.99 25.99 39.38 3.79
275 276 1.083489 GTGGCACGTTTAGCATGCTA 58.917 50.000 23.52 23.52 39.38 3.49
276 277 1.062587 GTGGCACGTTTAGCATGCTAG 59.937 52.381 25.56 17.45 39.38 3.42
277 278 0.028110 GGCACGTTTAGCATGCTAGC 59.972 55.000 25.56 23.32 39.38 3.42
278 279 0.028110 GCACGTTTAGCATGCTAGCC 59.972 55.000 25.56 18.61 36.40 3.93
279 280 0.657840 CACGTTTAGCATGCTAGCCC 59.342 55.000 25.56 16.39 34.23 5.19
280 281 0.251916 ACGTTTAGCATGCTAGCCCA 59.748 50.000 25.56 10.01 34.23 5.36
281 282 1.134098 ACGTTTAGCATGCTAGCCCAT 60.134 47.619 25.56 10.47 34.23 4.00
282 283 1.532868 CGTTTAGCATGCTAGCCCATC 59.467 52.381 25.56 10.55 34.23 3.51
283 284 2.808202 CGTTTAGCATGCTAGCCCATCT 60.808 50.000 25.56 6.69 34.23 2.90
284 285 2.551459 GTTTAGCATGCTAGCCCATCTG 59.449 50.000 25.56 3.30 34.23 2.90
285 286 1.720781 TAGCATGCTAGCCCATCTGA 58.279 50.000 23.52 0.00 34.23 3.27
286 287 1.065647 AGCATGCTAGCCCATCTGAT 58.934 50.000 21.21 0.00 34.23 2.90
287 288 1.424302 AGCATGCTAGCCCATCTGATT 59.576 47.619 21.21 0.00 34.23 2.57
288 289 2.158505 AGCATGCTAGCCCATCTGATTT 60.159 45.455 21.21 0.00 34.23 2.17
289 290 2.626743 GCATGCTAGCCCATCTGATTTT 59.373 45.455 13.29 0.00 0.00 1.82
290 291 3.069158 GCATGCTAGCCCATCTGATTTTT 59.931 43.478 13.29 0.00 0.00 1.94
291 292 4.279169 GCATGCTAGCCCATCTGATTTTTA 59.721 41.667 13.29 0.00 0.00 1.52
292 293 5.564259 GCATGCTAGCCCATCTGATTTTTAG 60.564 44.000 13.29 0.00 0.00 1.85
293 294 3.885297 TGCTAGCCCATCTGATTTTTAGC 59.115 43.478 13.29 10.75 34.41 3.09
294 295 3.254411 GCTAGCCCATCTGATTTTTAGCC 59.746 47.826 2.29 0.00 0.00 3.93
295 296 3.677156 AGCCCATCTGATTTTTAGCCT 57.323 42.857 0.00 0.00 0.00 4.58
296 297 3.294214 AGCCCATCTGATTTTTAGCCTG 58.706 45.455 0.00 0.00 0.00 4.85
297 298 3.026694 GCCCATCTGATTTTTAGCCTGT 58.973 45.455 0.00 0.00 0.00 4.00
298 299 3.448660 GCCCATCTGATTTTTAGCCTGTT 59.551 43.478 0.00 0.00 0.00 3.16
299 300 4.678840 GCCCATCTGATTTTTAGCCTGTTG 60.679 45.833 0.00 0.00 0.00 3.33
300 301 4.142093 CCCATCTGATTTTTAGCCTGTTGG 60.142 45.833 0.00 0.00 0.00 3.77
301 302 4.142093 CCATCTGATTTTTAGCCTGTTGGG 60.142 45.833 0.00 0.00 38.36 4.12
337 338 5.690865 CCTATTGGGCTGTAATTTAGGTCA 58.309 41.667 0.00 0.00 0.00 4.02
338 339 6.306987 CCTATTGGGCTGTAATTTAGGTCAT 58.693 40.000 0.00 0.00 0.00 3.06
339 340 7.458397 CCTATTGGGCTGTAATTTAGGTCATA 58.542 38.462 0.00 0.00 0.00 2.15
340 341 8.109634 CCTATTGGGCTGTAATTTAGGTCATAT 58.890 37.037 0.00 0.00 0.00 1.78
371 372 9.964303 AAAAATCTGAACAAAAATTAAATGGGC 57.036 25.926 0.00 0.00 0.00 5.36
372 373 7.686438 AATCTGAACAAAAATTAAATGGGCC 57.314 32.000 0.00 0.00 0.00 5.80
373 374 5.233988 TCTGAACAAAAATTAAATGGGCCG 58.766 37.500 0.00 0.00 0.00 6.13
374 375 4.962155 TGAACAAAAATTAAATGGGCCGT 58.038 34.783 0.00 0.00 0.00 5.68
375 376 4.752101 TGAACAAAAATTAAATGGGCCGTG 59.248 37.500 0.00 0.00 0.00 4.94
376 377 3.070748 ACAAAAATTAAATGGGCCGTGC 58.929 40.909 0.00 0.00 0.00 5.34
451 452 4.091939 GCCGGACCTAGCCCGTTT 62.092 66.667 5.05 0.00 45.14 3.60
452 453 2.724273 GCCGGACCTAGCCCGTTTA 61.724 63.158 5.05 0.00 45.14 2.01
453 454 1.440476 CCGGACCTAGCCCGTTTAG 59.560 63.158 17.00 2.55 45.14 1.85
454 455 1.227176 CGGACCTAGCCCGTTTAGC 60.227 63.158 12.09 0.00 41.91 3.09
455 456 1.673808 CGGACCTAGCCCGTTTAGCT 61.674 60.000 12.09 0.00 44.49 3.32
456 457 0.104487 GGACCTAGCCCGTTTAGCTC 59.896 60.000 0.00 0.00 41.83 4.09
457 458 0.248949 GACCTAGCCCGTTTAGCTCG 60.249 60.000 0.00 0.00 41.83 5.03
458 459 1.067582 CCTAGCCCGTTTAGCTCGG 59.932 63.158 5.38 5.38 46.49 4.63
463 464 4.446413 CCGTTTAGCTCGGGCCGT 62.446 66.667 27.32 9.60 43.68 5.68
464 465 3.186047 CGTTTAGCTCGGGCCGTG 61.186 66.667 27.32 24.90 39.73 4.94
465 466 3.497031 GTTTAGCTCGGGCCGTGC 61.497 66.667 37.66 37.66 44.90 5.34
478 479 4.368808 CGTGCCGTGCCGTTCTTG 62.369 66.667 0.00 0.00 0.00 3.02
479 480 4.683334 GTGCCGTGCCGTTCTTGC 62.683 66.667 0.00 0.00 0.00 4.01
482 483 4.368808 CCGTGCCGTTCTTGCGTG 62.369 66.667 0.00 0.00 0.00 5.34
484 485 3.649986 GTGCCGTTCTTGCGTGCT 61.650 61.111 0.00 0.00 0.00 4.40
485 486 2.029815 TGCCGTTCTTGCGTGCTA 59.970 55.556 0.00 0.00 0.00 3.49
486 487 2.314647 TGCCGTTCTTGCGTGCTAC 61.315 57.895 0.00 0.00 0.00 3.58
487 488 3.023591 GCCGTTCTTGCGTGCTACC 62.024 63.158 0.00 0.00 0.00 3.18
488 489 2.726691 CCGTTCTTGCGTGCTACCG 61.727 63.158 0.00 0.00 0.00 4.02
489 490 2.726691 CGTTCTTGCGTGCTACCGG 61.727 63.158 0.00 0.00 0.00 5.28
490 491 2.047655 TTCTTGCGTGCTACCGGG 60.048 61.111 6.32 0.00 0.00 5.73
491 492 4.752879 TCTTGCGTGCTACCGGGC 62.753 66.667 6.32 0.00 0.00 6.13
503 504 4.157120 CCGGGCCGGTCCAGTTAG 62.157 72.222 36.52 8.09 42.73 2.34
504 505 4.832608 CGGGCCGGTCCAGTTAGC 62.833 72.222 27.89 0.00 36.21 3.09
505 506 3.712907 GGGCCGGTCCAGTTAGCA 61.713 66.667 23.50 0.00 36.21 3.49
506 507 2.436115 GGCCGGTCCAGTTAGCAC 60.436 66.667 1.90 0.00 34.01 4.40
507 508 2.813908 GCCGGTCCAGTTAGCACG 60.814 66.667 1.90 0.00 0.00 5.34
508 509 2.967397 CCGGTCCAGTTAGCACGA 59.033 61.111 0.00 0.00 0.00 4.35
509 510 1.445582 CCGGTCCAGTTAGCACGAC 60.446 63.158 0.00 0.00 0.00 4.34
510 511 1.445582 CGGTCCAGTTAGCACGACC 60.446 63.158 0.00 5.36 0.00 4.79
511 512 1.079336 GGTCCAGTTAGCACGACCC 60.079 63.158 0.00 0.00 0.00 4.46
512 513 1.445582 GTCCAGTTAGCACGACCCG 60.446 63.158 0.00 0.00 0.00 5.28
513 514 1.904865 TCCAGTTAGCACGACCCGT 60.905 57.895 0.00 0.00 42.36 5.28
514 515 1.005394 CCAGTTAGCACGACCCGTT 60.005 57.895 0.00 0.00 38.32 4.44
515 516 0.601841 CCAGTTAGCACGACCCGTTT 60.602 55.000 0.00 0.00 38.32 3.60
516 517 0.511221 CAGTTAGCACGACCCGTTTG 59.489 55.000 0.00 0.00 38.32 2.93
517 518 0.601841 AGTTAGCACGACCCGTTTGG 60.602 55.000 0.00 0.00 38.32 3.28
518 519 1.962306 TTAGCACGACCCGTTTGGC 60.962 57.895 0.00 0.00 38.32 4.52
519 520 3.887335 TAGCACGACCCGTTTGGCC 62.887 63.158 0.00 0.00 38.32 5.36
521 522 3.353836 CACGACCCGTTTGGCCAG 61.354 66.667 5.11 0.00 38.32 4.85
524 525 2.349755 GACCCGTTTGGCCAGCTA 59.650 61.111 5.11 0.00 37.83 3.32
525 526 1.077716 GACCCGTTTGGCCAGCTAT 60.078 57.895 5.11 0.00 37.83 2.97
526 527 0.179468 GACCCGTTTGGCCAGCTATA 59.821 55.000 5.11 0.00 37.83 1.31
527 528 0.843984 ACCCGTTTGGCCAGCTATAT 59.156 50.000 5.11 0.00 37.83 0.86
528 529 1.238439 CCCGTTTGGCCAGCTATATG 58.762 55.000 5.11 0.00 0.00 1.78
529 530 1.202758 CCCGTTTGGCCAGCTATATGA 60.203 52.381 5.11 0.00 0.00 2.15
530 531 1.873591 CCGTTTGGCCAGCTATATGAC 59.126 52.381 5.11 0.00 0.00 3.06
531 532 2.485479 CCGTTTGGCCAGCTATATGACT 60.485 50.000 5.11 0.00 0.00 3.41
532 533 3.244078 CCGTTTGGCCAGCTATATGACTA 60.244 47.826 5.11 0.00 0.00 2.59
533 534 4.377021 CGTTTGGCCAGCTATATGACTAA 58.623 43.478 5.11 0.00 0.00 2.24
534 535 4.211374 CGTTTGGCCAGCTATATGACTAAC 59.789 45.833 5.11 1.67 0.00 2.34
535 536 5.123227 GTTTGGCCAGCTATATGACTAACA 58.877 41.667 5.11 0.00 0.00 2.41
536 537 5.567037 TTGGCCAGCTATATGACTAACAT 57.433 39.130 5.11 0.00 42.39 2.71
537 538 5.567037 TGGCCAGCTATATGACTAACATT 57.433 39.130 0.00 0.00 40.07 2.71
538 539 5.308014 TGGCCAGCTATATGACTAACATTG 58.692 41.667 0.00 0.00 40.07 2.82
539 540 5.163205 TGGCCAGCTATATGACTAACATTGT 60.163 40.000 0.00 0.00 40.07 2.71
540 541 5.409826 GGCCAGCTATATGACTAACATTGTC 59.590 44.000 0.00 0.00 40.07 3.18
541 542 6.226787 GCCAGCTATATGACTAACATTGTCT 58.773 40.000 0.00 0.00 40.07 3.41
542 543 6.367422 GCCAGCTATATGACTAACATTGTCTC 59.633 42.308 0.00 0.00 40.07 3.36
543 544 7.436933 CCAGCTATATGACTAACATTGTCTCA 58.563 38.462 0.00 0.00 40.07 3.27
544 545 7.928167 CCAGCTATATGACTAACATTGTCTCAA 59.072 37.037 0.00 0.00 40.07 3.02
545 546 9.317936 CAGCTATATGACTAACATTGTCTCAAA 57.682 33.333 0.00 0.00 40.07 2.69
546 547 9.890629 AGCTATATGACTAACATTGTCTCAAAA 57.109 29.630 0.00 0.00 40.07 2.44
577 578 9.561069 AGCTATATGACTAACAATCGGAAATTT 57.439 29.630 0.00 0.00 0.00 1.82
590 591 9.678941 ACAATCGGAAATTTCTTCTAGAAAAAC 57.321 29.630 17.42 0.00 46.08 2.43
612 613 4.337555 ACAATGTGAAATCTAGCTCCATGC 59.662 41.667 0.00 0.00 43.29 4.06
636 638 1.271163 TGGCGTAGAAAGAACTTGGGG 60.271 52.381 0.00 0.00 0.00 4.96
637 639 1.450025 GCGTAGAAAGAACTTGGGGG 58.550 55.000 0.00 0.00 0.00 5.40
673 675 8.546244 CATGTAACTGACAAAGCATATGTAGAG 58.454 37.037 4.29 0.00 42.78 2.43
735 737 1.667724 CTACAAAAGCAGGAGCCGATG 59.332 52.381 0.00 0.00 43.56 3.84
746 748 1.345741 GGAGCCGATGGATGAATCTGA 59.654 52.381 0.00 0.00 0.00 3.27
752 754 4.001652 CCGATGGATGAATCTGAAGGATG 58.998 47.826 0.00 0.00 34.45 3.51
911 913 1.227249 CCTACCCCTCTCTCTCTCCA 58.773 60.000 0.00 0.00 0.00 3.86
965 974 1.636769 GCCCCCAAGCTAAGCTAGGT 61.637 60.000 0.00 0.00 38.25 3.08
966 975 0.470341 CCCCCAAGCTAAGCTAGGTC 59.530 60.000 0.00 0.00 38.25 3.85
967 976 0.105039 CCCCAAGCTAAGCTAGGTCG 59.895 60.000 0.00 0.00 38.25 4.79
968 977 0.530870 CCCAAGCTAAGCTAGGTCGC 60.531 60.000 7.80 7.80 38.25 5.19
969 978 0.872021 CCAAGCTAAGCTAGGTCGCG 60.872 60.000 0.00 0.00 38.25 5.87
1329 1340 0.950836 TGTCGCATGGTGTTTCTTGG 59.049 50.000 0.00 0.00 0.00 3.61
1336 1347 4.379652 GCATGGTGTTTCTTGGTTGATTT 58.620 39.130 0.00 0.00 0.00 2.17
1350 1361 9.354673 TCTTGGTTGATTTCTTAGAAATCTTGT 57.645 29.630 33.70 12.08 37.50 3.16
1405 1416 2.088950 GGCCAACGAGTTTGCTAGTA 57.911 50.000 11.02 0.00 33.34 1.82
1486 1497 5.714806 TGCTATATGCCTGCTGTACAGTATA 59.285 40.000 23.44 14.39 45.68 1.47
1568 1583 1.141053 GGGACTGATGGGTATGGTGAC 59.859 57.143 0.00 0.00 0.00 3.67
1712 1727 2.005370 ACAAGTGGAGGAAGTACGGA 57.995 50.000 0.00 0.00 0.00 4.69
1897 1950 3.949754 TGGCCTCTAATTTGCAGATTCTG 59.050 43.478 5.63 9.40 34.12 3.02
2094 2160 9.777008 AAAATCCCTATGGTTTACAATCCTAAA 57.223 29.630 0.00 0.00 0.00 1.85
2095 2161 9.777008 AAATCCCTATGGTTTACAATCCTAAAA 57.223 29.630 0.00 0.00 0.00 1.52
2096 2162 9.777008 AATCCCTATGGTTTACAATCCTAAAAA 57.223 29.630 0.00 0.00 0.00 1.94
2097 2163 8.584063 TCCCTATGGTTTACAATCCTAAAAAC 57.416 34.615 0.00 0.00 0.00 2.43
2143 2209 3.351794 AGGACCGGAATCCTCTTTTTC 57.648 47.619 9.46 0.00 46.92 2.29
2219 2286 4.531732 AGAAGCCAAATAATTTGCCCTTCA 59.468 37.500 8.90 0.00 42.91 3.02
2381 2450 2.565391 TGTGCTTGGATTCTTACGAGGA 59.435 45.455 0.00 0.00 0.00 3.71
2401 2470 2.238942 TGGTTGTACTCACAGCACAG 57.761 50.000 0.00 0.00 37.60 3.66
2415 2484 3.494254 ACAGCGGGGGTCAAACCA 61.494 61.111 0.00 0.00 41.02 3.67
2505 2574 4.030753 GTCAATCTGAAGCTTCGTAACTCG 59.969 45.833 21.11 6.84 41.41 4.18
2580 2649 4.514781 TGTGAGCGTCTACATTGTACTT 57.485 40.909 0.00 0.00 0.00 2.24
2581 2650 5.632244 TGTGAGCGTCTACATTGTACTTA 57.368 39.130 0.00 0.00 0.00 2.24
2637 2706 3.368013 CGCTCACTCCACACATAACCTTA 60.368 47.826 0.00 0.00 0.00 2.69
2788 2866 4.496341 CGAATTGATATGCACCACTCAACC 60.496 45.833 0.00 0.00 31.00 3.77
2793 2871 2.280797 GCACCACTCAACCGAGCA 60.281 61.111 0.00 0.00 43.66 4.26
2812 2891 6.639686 CCGAGCATCCTTGATTAAATGAATTG 59.360 38.462 0.00 0.00 0.00 2.32
2914 2994 2.627699 GACCTTTCCAACCATGCTTTGA 59.372 45.455 6.81 0.00 0.00 2.69
2928 3008 3.465871 TGCTTTGAGGTTGCCAAAATTC 58.534 40.909 0.00 0.00 33.68 2.17
3076 3157 8.567285 ACTGGATTTCTTATAAACTGTTCCTG 57.433 34.615 0.00 0.00 0.00 3.86
3116 3201 2.112087 TTGCTTGCCTGGTGCGTA 59.888 55.556 0.00 0.00 45.60 4.42
3165 3251 4.818005 GTCCACATTCAGATCATGTATGCA 59.182 41.667 0.00 0.00 39.59 3.96
3212 3298 1.085091 GCTCGGCATGGATCATCATC 58.915 55.000 0.00 0.00 0.00 2.92
3269 3382 8.670135 TCATGTATGACTTTTGTTATTTACGGG 58.330 33.333 0.00 0.00 30.90 5.28
3270 3383 6.844254 TGTATGACTTTTGTTATTTACGGGC 58.156 36.000 0.00 0.00 30.90 6.13
3271 3384 5.968528 ATGACTTTTGTTATTTACGGGCA 57.031 34.783 0.00 0.00 0.00 5.36
3272 3385 5.968528 TGACTTTTGTTATTTACGGGCAT 57.031 34.783 0.00 0.00 0.00 4.40
3273 3386 5.704888 TGACTTTTGTTATTTACGGGCATG 58.295 37.500 0.00 0.00 0.00 4.06
3274 3387 5.473846 TGACTTTTGTTATTTACGGGCATGA 59.526 36.000 0.00 0.00 0.00 3.07
3275 3388 6.151985 TGACTTTTGTTATTTACGGGCATGAT 59.848 34.615 0.00 0.00 0.00 2.45
3276 3389 6.560711 ACTTTTGTTATTTACGGGCATGATC 58.439 36.000 0.00 0.00 0.00 2.92
3277 3390 5.508200 TTTGTTATTTACGGGCATGATCC 57.492 39.130 0.00 0.00 0.00 3.36
3278 3391 4.431416 TGTTATTTACGGGCATGATCCT 57.569 40.909 0.00 0.00 0.00 3.24
3279 3392 4.787551 TGTTATTTACGGGCATGATCCTT 58.212 39.130 0.00 0.00 0.00 3.36
3280 3393 5.197451 TGTTATTTACGGGCATGATCCTTT 58.803 37.500 0.00 0.00 0.00 3.11
3288 3401 1.403249 GGCATGATCCTTTGTGTGTGC 60.403 52.381 0.00 0.00 0.00 4.57
3319 3432 2.345876 TGGTTGTGTGCATCATAGTCG 58.654 47.619 0.00 0.00 0.00 4.18
3321 3434 2.094258 GGTTGTGTGCATCATAGTCGTG 59.906 50.000 0.00 0.00 0.00 4.35
3322 3435 1.358877 TGTGTGCATCATAGTCGTGC 58.641 50.000 0.00 0.00 39.26 5.34
3323 3436 0.298707 GTGTGCATCATAGTCGTGCG 59.701 55.000 0.00 0.00 41.61 5.34
3356 3469 6.881065 AGTGTGTGCTCATTGTATTTGTATCT 59.119 34.615 0.00 0.00 0.00 1.98
3361 3474 7.066163 TGTGCTCATTGTATTTGTATCTCCTTG 59.934 37.037 0.00 0.00 0.00 3.61
3368 3481 8.662781 TTGTATTTGTATCTCCTTGATGCTAC 57.337 34.615 0.00 0.00 38.39 3.58
3376 3489 8.650490 TGTATCTCCTTGATGCTACATTATGAA 58.350 33.333 0.00 0.00 38.39 2.57
3405 3518 9.573133 AAAAATAATAAAAGTGCTCTTCATCGG 57.427 29.630 0.74 0.00 32.90 4.18
3409 3522 6.817765 ATAAAAGTGCTCTTCATCGGAAAA 57.182 33.333 0.74 0.00 32.90 2.29
3511 3631 3.195661 GCATCCACCTAAACCTCTTACG 58.804 50.000 0.00 0.00 0.00 3.18
3616 3736 7.566569 TGATATTGTAATCCTACGTTTTCCCA 58.433 34.615 0.00 0.00 0.00 4.37
3636 3756 9.790344 TTTCCCAATTCACATACATTCAAAATT 57.210 25.926 0.00 0.00 0.00 1.82
3681 3829 4.077300 TGCACCATCATCTCCTAATGTC 57.923 45.455 0.00 0.00 0.00 3.06
3692 3840 4.495422 TCTCCTAATGTCTTCGTTTGCTC 58.505 43.478 0.00 0.00 0.00 4.26
3715 3863 8.954350 GCTCTGAATCATTTATTATAGGCATGT 58.046 33.333 0.00 0.00 0.00 3.21
3753 3901 6.299141 AGTGTTTTGAGCTCTTTCAGGAATA 58.701 36.000 16.19 0.00 0.00 1.75
3762 3910 7.071698 TGAGCTCTTTCAGGAATATGGATAGTT 59.928 37.037 16.19 0.00 0.00 2.24
3763 3911 7.222872 AGCTCTTTCAGGAATATGGATAGTTG 58.777 38.462 0.00 0.00 0.00 3.16
3780 3928 7.944000 TGGATAGTTGCATGATATACCAAACAT 59.056 33.333 0.00 0.00 0.00 2.71
3816 3964 4.035208 ACACTGCGTTTTCTAAACCTTCTG 59.965 41.667 0.00 0.00 0.00 3.02
3828 3976 2.327325 ACCTTCTGGCCAGAGAGTTA 57.673 50.000 33.16 18.79 38.88 2.24
3829 3977 2.621070 ACCTTCTGGCCAGAGAGTTAA 58.379 47.619 33.16 18.06 38.88 2.01
3989 4155 7.045416 TGTGATACACTTTTGTACTTGACTGT 58.955 34.615 0.00 0.00 41.12 3.55
4133 4309 4.263068 GGGCATGCCTCTGTAATACTGTAT 60.263 45.833 34.70 0.00 36.10 2.29
4134 4310 5.308825 GGCATGCCTCTGTAATACTGTATT 58.691 41.667 29.98 16.51 0.00 1.89
4167 4343 8.940952 CCTTCTGTTTTGGTGTTTTTGAATTAA 58.059 29.630 0.00 0.00 0.00 1.40
4246 4423 3.184541 GACCATGCTTGCATTTAGCTTG 58.815 45.455 14.66 14.66 45.94 4.01
4247 4424 2.564062 ACCATGCTTGCATTTAGCTTGT 59.436 40.909 18.23 7.84 45.94 3.16
4248 4425 3.763360 ACCATGCTTGCATTTAGCTTGTA 59.237 39.130 18.23 0.00 45.94 2.41
4249 4426 4.107622 CCATGCTTGCATTTAGCTTGTAC 58.892 43.478 18.23 0.00 45.94 2.90
4250 4427 4.142315 CCATGCTTGCATTTAGCTTGTACT 60.142 41.667 18.23 0.00 45.94 2.73
4251 4428 4.685169 TGCTTGCATTTAGCTTGTACTC 57.315 40.909 10.10 0.00 45.94 2.59
4252 4429 3.440173 TGCTTGCATTTAGCTTGTACTCC 59.560 43.478 10.10 0.00 45.94 3.85
4253 4430 3.181496 GCTTGCATTTAGCTTGTACTCCC 60.181 47.826 1.51 0.00 45.94 4.30
4254 4431 4.265073 CTTGCATTTAGCTTGTACTCCCT 58.735 43.478 0.00 0.00 45.94 4.20
4255 4432 4.301072 TGCATTTAGCTTGTACTCCCTT 57.699 40.909 0.00 0.00 45.94 3.95
4256 4433 4.662278 TGCATTTAGCTTGTACTCCCTTT 58.338 39.130 0.00 0.00 45.94 3.11
4257 4434 5.076873 TGCATTTAGCTTGTACTCCCTTTT 58.923 37.500 0.00 0.00 45.94 2.27
4258 4435 5.538433 TGCATTTAGCTTGTACTCCCTTTTT 59.462 36.000 0.00 0.00 45.94 1.94
4325 4502 6.342338 TCTAGGTTAGTCTCAAGTCAAACC 57.658 41.667 0.00 0.00 37.28 3.27
4344 4521 4.465632 ACCTTTTCAAGTTTGACCAACC 57.534 40.909 0.00 0.00 36.83 3.77
4351 4528 7.519032 TTTCAAGTTTGACCAACCTTATAGG 57.481 36.000 0.00 0.00 37.99 2.57
4495 4677 3.393278 AGAGGTTTGGCTTAGGTGTGTTA 59.607 43.478 0.00 0.00 0.00 2.41
4498 4680 5.497474 AGGTTTGGCTTAGGTGTGTTATAG 58.503 41.667 0.00 0.00 0.00 1.31
4499 4681 5.249852 AGGTTTGGCTTAGGTGTGTTATAGA 59.750 40.000 0.00 0.00 0.00 1.98
4500 4682 6.069615 AGGTTTGGCTTAGGTGTGTTATAGAT 60.070 38.462 0.00 0.00 0.00 1.98
4665 4847 2.092681 CACGTGTGATGTGATGTACTGC 59.907 50.000 7.58 0.00 37.29 4.40
4740 4922 4.716784 TGGCTTCTCTGAACCTGTATATGT 59.283 41.667 0.00 0.00 0.00 2.29
4741 4923 5.163405 TGGCTTCTCTGAACCTGTATATGTC 60.163 44.000 0.00 0.00 0.00 3.06
4828 5014 0.318699 CGTGAAGAAGCGTGTGGAGA 60.319 55.000 0.00 0.00 0.00 3.71
4836 5022 2.262915 CGTGTGGAGAGGCTGTCC 59.737 66.667 23.11 23.11 34.31 4.02
4960 5194 0.958091 CTCCTTCTGATCGATCGGCT 59.042 55.000 26.42 2.70 33.18 5.52
4989 5223 0.559342 CGAAACGCACACAAAACACG 59.441 50.000 0.00 0.00 0.00 4.49
5054 5291 6.446781 TTGGTTTAGATAGACTAGTCACCG 57.553 41.667 24.44 0.00 33.68 4.94
5067 5304 7.424001 AGACTAGTCACCGTTATTATTACTGC 58.576 38.462 24.44 0.00 0.00 4.40
5163 5400 3.156401 GAGCATCTACAGTCGCGAG 57.844 57.895 10.24 0.00 0.00 5.03
5178 5415 1.144057 CGAGGTGCTAATTCGGCCT 59.856 57.895 0.00 0.00 0.00 5.19
5186 5423 2.290008 TGCTAATTCGGCCTCTCAAACA 60.290 45.455 0.00 0.00 0.00 2.83
5187 5424 2.945668 GCTAATTCGGCCTCTCAAACAT 59.054 45.455 0.00 0.00 0.00 2.71
5195 5432 0.389817 CCTCTCAAACATGTCCGCGA 60.390 55.000 8.23 0.00 0.00 5.87
5203 5440 1.349627 CATGTCCGCGAGCATTGAC 59.650 57.895 8.23 5.74 0.00 3.18
5204 5441 2.167219 ATGTCCGCGAGCATTGACG 61.167 57.895 8.23 0.00 0.00 4.35
5206 5443 2.092291 GTCCGCGAGCATTGACGAA 61.092 57.895 8.23 0.00 0.00 3.85
5207 5444 1.373622 TCCGCGAGCATTGACGAAA 60.374 52.632 8.23 0.00 0.00 3.46
5211 5448 0.234625 GCGAGCATTGACGAAACACA 59.765 50.000 7.62 0.00 0.00 3.72
5236 5473 4.570926 TCATATTTCCCTCTCCACATCCT 58.429 43.478 0.00 0.00 0.00 3.24
5238 5475 2.342406 TTTCCCTCTCCACATCCTCA 57.658 50.000 0.00 0.00 0.00 3.86
5318 5556 1.273886 AGAAGAAGAGAGTTGGTCCGC 59.726 52.381 0.00 0.00 0.00 5.54
5414 5652 0.895530 CGGACTAGCACTCAAGGGAA 59.104 55.000 0.00 0.00 0.00 3.97
5710 5949 2.409570 GGTAGTTCCCCATAAGCCTCT 58.590 52.381 0.00 0.00 0.00 3.69
5827 6066 4.209538 CCCCTTCAATCTGCACATGAATA 58.790 43.478 0.00 0.00 33.03 1.75
5850 6089 4.116328 CTCGAGCAAGGACCGCGA 62.116 66.667 8.23 0.00 33.67 5.87
5919 6158 0.100503 GGCACGCCAATATCACCAAC 59.899 55.000 2.36 0.00 35.81 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 0.179067 TTGGTGGTGACGAAGGTGTC 60.179 55.000 0.00 0.00 39.37 3.67
6 7 0.472471 ATTGGTGGTGACGAAGGTGT 59.528 50.000 0.00 0.00 0.00 4.16
7 8 0.874390 CATTGGTGGTGACGAAGGTG 59.126 55.000 0.00 0.00 0.00 4.00
9 10 0.036164 TCCATTGGTGGTGACGAAGG 59.964 55.000 1.86 0.00 46.16 3.46
10 11 1.442769 CTCCATTGGTGGTGACGAAG 58.557 55.000 1.86 0.00 46.16 3.79
11 12 0.605319 GCTCCATTGGTGGTGACGAA 60.605 55.000 1.86 0.00 46.16 3.85
13 14 1.003355 AGCTCCATTGGTGGTGACG 60.003 57.895 8.57 0.00 46.16 4.35
14 15 0.678048 GGAGCTCCATTGGTGGTGAC 60.678 60.000 28.43 3.83 46.16 3.67
15 16 1.685224 GGAGCTCCATTGGTGGTGA 59.315 57.895 28.43 0.00 46.16 4.02
16 17 1.746615 CGGAGCTCCATTGGTGGTG 60.747 63.158 31.67 8.81 46.16 4.17
17 18 2.671070 CGGAGCTCCATTGGTGGT 59.329 61.111 31.67 9.09 46.16 4.16
30 31 2.688446 TCAGTAGAGTTATGTGGCGGAG 59.312 50.000 0.00 0.00 0.00 4.63
31 32 2.730382 TCAGTAGAGTTATGTGGCGGA 58.270 47.619 0.00 0.00 0.00 5.54
32 33 3.520290 TTCAGTAGAGTTATGTGGCGG 57.480 47.619 0.00 0.00 0.00 6.13
33 34 5.168569 TCTTTTCAGTAGAGTTATGTGGCG 58.831 41.667 0.00 0.00 0.00 5.69
34 35 7.435068 TTTCTTTTCAGTAGAGTTATGTGGC 57.565 36.000 0.00 0.00 0.00 5.01
35 36 9.665264 GTTTTTCTTTTCAGTAGAGTTATGTGG 57.335 33.333 0.00 0.00 0.00 4.17
56 57 8.971827 ATCCGCCGGATGAAACTCTAGTTTTT 62.972 42.308 19.67 1.44 41.94 1.94
57 58 7.598932 ATCCGCCGGATGAAACTCTAGTTTT 62.599 44.000 19.67 0.00 41.94 2.43
58 59 6.195141 ATCCGCCGGATGAAACTCTAGTTT 62.195 45.833 19.67 7.80 41.43 2.66
59 60 1.134788 CCGCCGGATGAAACTCTAGTT 60.135 52.381 5.05 0.00 40.50 2.24
60 61 0.460311 CCGCCGGATGAAACTCTAGT 59.540 55.000 5.05 0.00 0.00 2.57
61 62 0.744874 TCCGCCGGATGAAACTCTAG 59.255 55.000 5.05 0.00 0.00 2.43
62 63 1.340248 GATCCGCCGGATGAAACTCTA 59.660 52.381 25.80 0.00 43.27 2.43
63 64 0.105039 GATCCGCCGGATGAAACTCT 59.895 55.000 25.80 0.00 43.27 3.24
64 65 0.105039 AGATCCGCCGGATGAAACTC 59.895 55.000 25.80 8.89 43.27 3.01
65 66 0.179073 CAGATCCGCCGGATGAAACT 60.179 55.000 25.80 11.50 43.27 2.66
66 67 0.462047 ACAGATCCGCCGGATGAAAC 60.462 55.000 25.80 9.05 43.27 2.78
67 68 1.068588 CTACAGATCCGCCGGATGAAA 59.931 52.381 25.80 5.14 43.27 2.69
68 69 0.673985 CTACAGATCCGCCGGATGAA 59.326 55.000 25.80 4.77 43.27 2.57
69 70 0.179001 TCTACAGATCCGCCGGATGA 60.179 55.000 25.80 11.34 43.27 2.92
70 71 0.891373 ATCTACAGATCCGCCGGATG 59.109 55.000 25.80 14.71 43.27 3.51
71 72 1.178276 GATCTACAGATCCGCCGGAT 58.822 55.000 20.53 20.53 46.28 4.18
72 73 1.235281 CGATCTACAGATCCGCCGGA 61.235 60.000 8.97 8.97 46.16 5.14
73 74 1.210413 CGATCTACAGATCCGCCGG 59.790 63.158 12.51 0.00 46.16 6.13
74 75 0.805614 ATCGATCTACAGATCCGCCG 59.194 55.000 12.51 3.32 46.16 6.46
75 76 1.734047 GCATCGATCTACAGATCCGCC 60.734 57.143 12.51 0.00 46.16 6.13
76 77 1.623359 GCATCGATCTACAGATCCGC 58.377 55.000 12.51 9.48 46.16 5.54
77 78 1.815613 AGGCATCGATCTACAGATCCG 59.184 52.381 12.51 8.55 46.16 4.18
78 79 4.265893 TCTAGGCATCGATCTACAGATCC 58.734 47.826 12.51 0.68 46.16 3.36
79 80 5.588246 TGATCTAGGCATCGATCTACAGATC 59.412 44.000 19.91 19.91 45.60 2.75
80 81 5.504853 TGATCTAGGCATCGATCTACAGAT 58.495 41.667 13.19 1.87 37.51 2.90
81 82 4.911390 TGATCTAGGCATCGATCTACAGA 58.089 43.478 13.19 0.00 37.51 3.41
82 83 5.635417 TTGATCTAGGCATCGATCTACAG 57.365 43.478 13.19 0.00 37.51 2.74
83 84 6.405278 TTTTGATCTAGGCATCGATCTACA 57.595 37.500 13.19 0.00 37.51 2.74
84 85 6.183360 GCATTTTGATCTAGGCATCGATCTAC 60.183 42.308 13.19 0.00 37.51 2.59
85 86 5.871524 GCATTTTGATCTAGGCATCGATCTA 59.128 40.000 13.19 3.98 37.51 1.98
86 87 4.694509 GCATTTTGATCTAGGCATCGATCT 59.305 41.667 13.19 0.00 37.51 2.75
87 88 4.142730 GGCATTTTGATCTAGGCATCGATC 60.143 45.833 5.97 5.97 37.22 3.69
88 89 3.755378 GGCATTTTGATCTAGGCATCGAT 59.245 43.478 0.00 0.00 0.00 3.59
89 90 3.141398 GGCATTTTGATCTAGGCATCGA 58.859 45.455 0.00 0.00 0.00 3.59
90 91 2.880268 TGGCATTTTGATCTAGGCATCG 59.120 45.455 0.00 0.00 0.00 3.84
91 92 3.633525 TGTGGCATTTTGATCTAGGCATC 59.366 43.478 0.00 0.00 37.12 3.91
92 93 3.382546 GTGTGGCATTTTGATCTAGGCAT 59.617 43.478 0.00 0.00 37.12 4.40
93 94 2.754552 GTGTGGCATTTTGATCTAGGCA 59.245 45.455 0.00 0.00 0.00 4.75
94 95 2.223340 CGTGTGGCATTTTGATCTAGGC 60.223 50.000 0.00 0.00 0.00 3.93
95 96 3.063997 GTCGTGTGGCATTTTGATCTAGG 59.936 47.826 0.00 0.00 0.00 3.02
96 97 3.935203 AGTCGTGTGGCATTTTGATCTAG 59.065 43.478 0.00 0.00 0.00 2.43
97 98 3.937814 AGTCGTGTGGCATTTTGATCTA 58.062 40.909 0.00 0.00 0.00 1.98
98 99 2.783135 AGTCGTGTGGCATTTTGATCT 58.217 42.857 0.00 0.00 0.00 2.75
99 100 4.403453 GTTAGTCGTGTGGCATTTTGATC 58.597 43.478 0.00 0.00 0.00 2.92
100 101 3.190535 GGTTAGTCGTGTGGCATTTTGAT 59.809 43.478 0.00 0.00 0.00 2.57
101 102 2.550606 GGTTAGTCGTGTGGCATTTTGA 59.449 45.455 0.00 0.00 0.00 2.69
102 103 2.292016 TGGTTAGTCGTGTGGCATTTTG 59.708 45.455 0.00 0.00 0.00 2.44
103 104 2.552315 CTGGTTAGTCGTGTGGCATTTT 59.448 45.455 0.00 0.00 0.00 1.82
104 105 2.151202 CTGGTTAGTCGTGTGGCATTT 58.849 47.619 0.00 0.00 0.00 2.32
105 106 1.346395 TCTGGTTAGTCGTGTGGCATT 59.654 47.619 0.00 0.00 0.00 3.56
106 107 0.973632 TCTGGTTAGTCGTGTGGCAT 59.026 50.000 0.00 0.00 0.00 4.40
107 108 0.032952 GTCTGGTTAGTCGTGTGGCA 59.967 55.000 0.00 0.00 0.00 4.92
108 109 0.669625 GGTCTGGTTAGTCGTGTGGC 60.670 60.000 0.00 0.00 0.00 5.01
109 110 0.966920 AGGTCTGGTTAGTCGTGTGG 59.033 55.000 0.00 0.00 0.00 4.17
110 111 1.336887 CCAGGTCTGGTTAGTCGTGTG 60.337 57.143 8.78 0.00 45.53 3.82
111 112 0.966920 CCAGGTCTGGTTAGTCGTGT 59.033 55.000 8.78 0.00 45.53 4.49
112 113 3.814577 CCAGGTCTGGTTAGTCGTG 57.185 57.895 8.78 0.00 45.53 4.35
122 123 2.672996 CCCGTTTGGCCAGGTCTG 60.673 66.667 5.11 0.00 0.00 3.51
159 160 1.662438 ATTAAACGTGCCATGGCGGG 61.662 55.000 30.87 25.76 45.51 6.13
160 161 1.002900 CTATTAAACGTGCCATGGCGG 60.003 52.381 30.87 26.12 45.51 6.13
161 162 1.668751 ACTATTAAACGTGCCATGGCG 59.331 47.619 30.87 20.22 45.51 5.69
162 163 2.286184 CGACTATTAAACGTGCCATGGC 60.286 50.000 30.54 30.54 42.35 4.40
163 164 2.286833 CCGACTATTAAACGTGCCATGG 59.713 50.000 7.63 7.63 0.00 3.66
164 165 2.286833 CCCGACTATTAAACGTGCCATG 59.713 50.000 0.00 0.00 0.00 3.66
165 166 2.557317 CCCGACTATTAAACGTGCCAT 58.443 47.619 0.00 0.00 0.00 4.40
166 167 2.008045 GCCCGACTATTAAACGTGCCA 61.008 52.381 0.00 0.00 0.00 4.92
167 168 0.654160 GCCCGACTATTAAACGTGCC 59.346 55.000 0.00 0.00 0.00 5.01
168 169 0.654160 GGCCCGACTATTAAACGTGC 59.346 55.000 0.00 0.00 0.00 5.34
169 170 0.925466 CGGCCCGACTATTAAACGTG 59.075 55.000 0.00 0.00 0.00 4.49
170 171 0.532115 ACGGCCCGACTATTAAACGT 59.468 50.000 11.71 0.00 0.00 3.99
171 172 0.925466 CACGGCCCGACTATTAAACG 59.075 55.000 11.71 0.00 0.00 3.60
172 173 1.929169 GACACGGCCCGACTATTAAAC 59.071 52.381 11.71 0.00 0.00 2.01
173 174 1.469595 CGACACGGCCCGACTATTAAA 60.470 52.381 11.71 0.00 0.00 1.52
174 175 0.101040 CGACACGGCCCGACTATTAA 59.899 55.000 11.71 0.00 0.00 1.40
175 176 1.031571 ACGACACGGCCCGACTATTA 61.032 55.000 11.71 0.00 0.00 0.98
176 177 2.345760 ACGACACGGCCCGACTATT 61.346 57.895 11.71 0.00 0.00 1.73
177 178 2.753043 ACGACACGGCCCGACTAT 60.753 61.111 11.71 0.00 0.00 2.12
178 179 3.740397 CACGACACGGCCCGACTA 61.740 66.667 11.71 0.00 0.00 2.59
212 213 4.792804 GTGCCTGGGCCAGAGAGC 62.793 72.222 34.84 27.58 41.09 4.09
213 214 4.463879 CGTGCCTGGGCCAGAGAG 62.464 72.222 34.84 18.97 41.09 3.20
226 227 2.286772 CCGTTTAATAATCAGGCCGTGC 60.287 50.000 0.00 0.00 0.00 5.34
227 228 2.289547 CCCGTTTAATAATCAGGCCGTG 59.710 50.000 0.00 0.00 0.00 4.94
228 229 2.567985 CCCGTTTAATAATCAGGCCGT 58.432 47.619 0.00 0.00 0.00 5.68
229 230 1.265905 GCCCGTTTAATAATCAGGCCG 59.734 52.381 0.00 0.00 32.68 6.13
231 232 1.265905 CGGCCCGTTTAATAATCAGGC 59.734 52.381 0.00 0.78 38.21 4.85
232 233 1.877443 CCGGCCCGTTTAATAATCAGG 59.123 52.381 0.85 0.00 0.00 3.86
233 234 1.265905 GCCGGCCCGTTTAATAATCAG 59.734 52.381 18.11 0.00 0.00 2.90
234 235 1.310904 GCCGGCCCGTTTAATAATCA 58.689 50.000 18.11 0.00 0.00 2.57
235 236 0.594602 GGCCGGCCCGTTTAATAATC 59.405 55.000 36.64 4.14 0.00 1.75
236 237 2.723231 GGCCGGCCCGTTTAATAAT 58.277 52.632 36.64 0.00 0.00 1.28
237 238 4.239162 GGCCGGCCCGTTTAATAA 57.761 55.556 36.64 0.00 0.00 1.40
260 261 0.657840 GGGCTAGCATGCTAAACGTG 59.342 55.000 26.71 16.22 38.41 4.49
261 262 0.251916 TGGGCTAGCATGCTAAACGT 59.748 50.000 26.71 4.42 0.00 3.99
262 263 1.532868 GATGGGCTAGCATGCTAAACG 59.467 52.381 26.71 16.91 0.00 3.60
263 264 2.551459 CAGATGGGCTAGCATGCTAAAC 59.449 50.000 26.71 20.75 0.00 2.01
264 265 2.439135 TCAGATGGGCTAGCATGCTAAA 59.561 45.455 26.71 13.82 0.00 1.85
265 266 2.049372 TCAGATGGGCTAGCATGCTAA 58.951 47.619 26.71 13.61 0.00 3.09
266 267 1.720781 TCAGATGGGCTAGCATGCTA 58.279 50.000 25.40 25.40 0.00 3.49
267 268 1.065647 ATCAGATGGGCTAGCATGCT 58.934 50.000 25.99 25.99 0.00 3.79
268 269 1.906990 AATCAGATGGGCTAGCATGC 58.093 50.000 18.24 10.51 0.00 4.06
269 270 4.931661 AAAAATCAGATGGGCTAGCATG 57.068 40.909 18.24 6.90 0.00 4.06
270 271 4.522022 GCTAAAAATCAGATGGGCTAGCAT 59.478 41.667 18.24 1.45 32.61 3.79
271 272 3.885297 GCTAAAAATCAGATGGGCTAGCA 59.115 43.478 18.24 0.00 32.61 3.49
272 273 3.254411 GGCTAAAAATCAGATGGGCTAGC 59.746 47.826 6.04 6.04 0.00 3.42
273 274 4.518211 CAGGCTAAAAATCAGATGGGCTAG 59.482 45.833 0.00 0.00 0.00 3.42
274 275 4.079787 ACAGGCTAAAAATCAGATGGGCTA 60.080 41.667 0.00 0.00 0.00 3.93
275 276 3.294214 CAGGCTAAAAATCAGATGGGCT 58.706 45.455 0.00 0.00 0.00 5.19
276 277 3.026694 ACAGGCTAAAAATCAGATGGGC 58.973 45.455 0.00 0.00 0.00 5.36
277 278 4.142093 CCAACAGGCTAAAAATCAGATGGG 60.142 45.833 0.00 0.00 0.00 4.00
278 279 4.142093 CCCAACAGGCTAAAAATCAGATGG 60.142 45.833 0.00 0.00 0.00 3.51
279 280 5.002464 CCCAACAGGCTAAAAATCAGATG 57.998 43.478 0.00 0.00 0.00 2.90
293 294 3.826729 GGCCTAAAATATAGCCCAACAGG 59.173 47.826 0.00 0.00 39.60 4.00
314 315 5.690865 TGACCTAAATTACAGCCCAATAGG 58.309 41.667 0.00 0.00 35.62 2.57
345 346 9.964303 GCCCATTTAATTTTTGTTCAGATTTTT 57.036 25.926 0.00 0.00 0.00 1.94
346 347 8.575589 GGCCCATTTAATTTTTGTTCAGATTTT 58.424 29.630 0.00 0.00 0.00 1.82
347 348 7.094848 CGGCCCATTTAATTTTTGTTCAGATTT 60.095 33.333 0.00 0.00 0.00 2.17
348 349 6.371271 CGGCCCATTTAATTTTTGTTCAGATT 59.629 34.615 0.00 0.00 0.00 2.40
349 350 5.874261 CGGCCCATTTAATTTTTGTTCAGAT 59.126 36.000 0.00 0.00 0.00 2.90
350 351 5.221541 ACGGCCCATTTAATTTTTGTTCAGA 60.222 36.000 0.00 0.00 0.00 3.27
351 352 4.994217 ACGGCCCATTTAATTTTTGTTCAG 59.006 37.500 0.00 0.00 0.00 3.02
352 353 4.752101 CACGGCCCATTTAATTTTTGTTCA 59.248 37.500 0.00 0.00 0.00 3.18
353 354 4.377943 GCACGGCCCATTTAATTTTTGTTC 60.378 41.667 0.00 0.00 0.00 3.18
354 355 3.500299 GCACGGCCCATTTAATTTTTGTT 59.500 39.130 0.00 0.00 0.00 2.83
355 356 3.070748 GCACGGCCCATTTAATTTTTGT 58.929 40.909 0.00 0.00 0.00 2.83
356 357 2.418280 GGCACGGCCCATTTAATTTTTG 59.582 45.455 0.00 0.00 44.06 2.44
357 358 2.705730 GGCACGGCCCATTTAATTTTT 58.294 42.857 0.00 0.00 44.06 1.94
358 359 2.394930 GGCACGGCCCATTTAATTTT 57.605 45.000 0.00 0.00 44.06 1.82
398 399 4.517934 CATGCCTGGGCCTGGAGG 62.518 72.222 31.46 18.34 41.09 4.30
437 438 0.104487 GAGCTAAACGGGCTAGGTCC 59.896 60.000 8.05 0.00 40.40 4.46
438 439 0.248949 CGAGCTAAACGGGCTAGGTC 60.249 60.000 8.85 8.85 40.40 3.85
439 440 1.673808 CCGAGCTAAACGGGCTAGGT 61.674 60.000 4.45 3.43 44.01 3.08
440 441 1.067582 CCGAGCTAAACGGGCTAGG 59.932 63.158 4.45 0.00 45.65 3.02
441 442 4.732106 CCGAGCTAAACGGGCTAG 57.268 61.111 4.45 0.00 45.65 3.42
447 448 3.186047 CACGGCCCGAGCTAAACG 61.186 66.667 11.71 0.00 39.73 3.60
448 449 3.497031 GCACGGCCCGAGCTAAAC 61.497 66.667 18.56 0.00 40.03 2.01
449 450 4.770874 GGCACGGCCCGAGCTAAA 62.771 66.667 24.26 0.00 44.06 1.85
467 468 2.314647 TAGCACGCAAGAACGGCAC 61.315 57.895 0.00 0.00 43.62 5.01
468 469 2.029815 TAGCACGCAAGAACGGCA 59.970 55.556 0.00 0.00 43.62 5.69
469 470 2.474712 GTAGCACGCAAGAACGGC 59.525 61.111 0.00 0.00 43.62 5.68
470 471 2.726691 CGGTAGCACGCAAGAACGG 61.727 63.158 0.00 0.00 43.62 4.44
471 472 2.726691 CCGGTAGCACGCAAGAACG 61.727 63.158 0.00 0.00 43.62 3.95
472 473 2.388232 CCCGGTAGCACGCAAGAAC 61.388 63.158 0.00 0.00 43.62 3.01
473 474 2.047655 CCCGGTAGCACGCAAGAA 60.048 61.111 0.00 0.00 43.62 2.52
474 475 4.752879 GCCCGGTAGCACGCAAGA 62.753 66.667 0.00 0.00 43.62 3.02
487 488 4.832608 GCTAACTGGACCGGCCCG 62.833 72.222 0.00 0.00 34.97 6.13
488 489 3.712907 TGCTAACTGGACCGGCCC 61.713 66.667 0.00 0.00 34.97 5.80
489 490 2.436115 GTGCTAACTGGACCGGCC 60.436 66.667 0.00 4.32 37.10 6.13
490 491 2.813908 CGTGCTAACTGGACCGGC 60.814 66.667 0.00 0.00 33.10 6.13
491 492 1.445582 GTCGTGCTAACTGGACCGG 60.446 63.158 0.00 0.00 33.10 5.28
492 493 1.445582 GGTCGTGCTAACTGGACCG 60.446 63.158 0.00 0.00 33.10 4.79
493 494 1.079336 GGGTCGTGCTAACTGGACC 60.079 63.158 0.49 0.49 33.10 4.46
494 495 1.445582 CGGGTCGTGCTAACTGGAC 60.446 63.158 0.00 0.00 0.00 4.02
495 496 1.466025 AACGGGTCGTGCTAACTGGA 61.466 55.000 0.00 0.00 39.99 3.86
496 497 0.601841 AAACGGGTCGTGCTAACTGG 60.602 55.000 0.00 0.00 39.99 4.00
497 498 0.511221 CAAACGGGTCGTGCTAACTG 59.489 55.000 0.00 0.00 39.99 3.16
498 499 0.601841 CCAAACGGGTCGTGCTAACT 60.602 55.000 0.00 0.00 39.99 2.24
499 500 1.864176 CCAAACGGGTCGTGCTAAC 59.136 57.895 0.00 0.00 39.99 2.34
500 501 1.962306 GCCAAACGGGTCGTGCTAA 60.962 57.895 0.00 0.00 39.99 3.09
501 502 2.357760 GCCAAACGGGTCGTGCTA 60.358 61.111 0.00 0.00 39.99 3.49
507 508 0.179468 TATAGCTGGCCAAACGGGTC 59.821 55.000 7.01 0.00 43.63 4.46
508 509 0.843984 ATATAGCTGGCCAAACGGGT 59.156 50.000 7.01 2.77 39.65 5.28
509 510 1.202758 TCATATAGCTGGCCAAACGGG 60.203 52.381 7.01 0.00 40.85 5.28
510 511 1.873591 GTCATATAGCTGGCCAAACGG 59.126 52.381 7.01 0.00 0.00 4.44
511 512 2.838736 AGTCATATAGCTGGCCAAACG 58.161 47.619 7.01 0.00 0.00 3.60
512 513 5.123227 TGTTAGTCATATAGCTGGCCAAAC 58.877 41.667 7.01 4.10 0.00 2.93
513 514 5.366482 TGTTAGTCATATAGCTGGCCAAA 57.634 39.130 7.01 0.00 0.00 3.28
514 515 5.567037 ATGTTAGTCATATAGCTGGCCAA 57.433 39.130 7.01 0.00 34.67 4.52
515 516 5.163205 ACAATGTTAGTCATATAGCTGGCCA 60.163 40.000 4.71 4.71 35.48 5.36
516 517 5.308825 ACAATGTTAGTCATATAGCTGGCC 58.691 41.667 0.00 0.00 35.48 5.36
517 518 6.226787 AGACAATGTTAGTCATATAGCTGGC 58.773 40.000 0.00 0.00 38.46 4.85
518 519 7.436933 TGAGACAATGTTAGTCATATAGCTGG 58.563 38.462 0.00 0.00 38.46 4.85
519 520 8.877808 TTGAGACAATGTTAGTCATATAGCTG 57.122 34.615 0.00 0.00 38.46 4.24
520 521 9.890629 TTTTGAGACAATGTTAGTCATATAGCT 57.109 29.630 0.00 0.00 38.46 3.32
547 548 8.958119 TCCGATTGTTAGTCATATAGCTTTTT 57.042 30.769 0.00 0.00 0.00 1.94
548 549 8.958119 TTCCGATTGTTAGTCATATAGCTTTT 57.042 30.769 0.00 0.00 0.00 2.27
549 550 8.958119 TTTCCGATTGTTAGTCATATAGCTTT 57.042 30.769 0.00 0.00 0.00 3.51
550 551 9.561069 AATTTCCGATTGTTAGTCATATAGCTT 57.439 29.630 0.00 0.00 0.00 3.74
551 552 9.561069 AAATTTCCGATTGTTAGTCATATAGCT 57.439 29.630 0.00 0.00 0.00 3.32
552 553 9.813080 GAAATTTCCGATTGTTAGTCATATAGC 57.187 33.333 6.95 0.00 0.00 2.97
556 557 9.667107 AGAAGAAATTTCCGATTGTTAGTCATA 57.333 29.630 14.61 0.00 0.00 2.15
557 558 8.567285 AGAAGAAATTTCCGATTGTTAGTCAT 57.433 30.769 14.61 0.00 0.00 3.06
558 559 7.979444 AGAAGAAATTTCCGATTGTTAGTCA 57.021 32.000 14.61 0.00 0.00 3.41
559 560 9.367444 TCTAGAAGAAATTTCCGATTGTTAGTC 57.633 33.333 14.61 0.00 0.00 2.59
560 561 9.720769 TTCTAGAAGAAATTTCCGATTGTTAGT 57.279 29.630 14.61 0.00 29.99 2.24
590 591 4.554134 CGCATGGAGCTAGATTTCACATTG 60.554 45.833 0.00 0.00 42.61 2.82
601 602 1.723870 GCCAAACGCATGGAGCTAG 59.276 57.895 11.04 0.00 43.54 3.42
620 622 4.368565 AGTTCCCCCAAGTTCTTTCTAC 57.631 45.455 0.00 0.00 0.00 2.59
636 638 4.036262 TGTCAGTTACATGCAACAAGTTCC 59.964 41.667 11.35 0.00 31.43 3.62
637 639 5.168526 TGTCAGTTACATGCAACAAGTTC 57.831 39.130 11.35 3.18 31.43 3.01
673 675 6.271566 ACCTGTTATAAACTAGCTAGCGTTC 58.728 40.000 20.91 5.90 0.00 3.95
735 737 4.066490 CTGCTCATCCTTCAGATTCATCC 58.934 47.826 0.00 0.00 30.59 3.51
746 748 0.907486 TGCTGTAGCTGCTCATCCTT 59.093 50.000 4.91 0.00 42.66 3.36
752 754 1.691215 GCTCGTTGCTGTAGCTGCTC 61.691 60.000 4.91 0.00 42.66 4.26
911 913 3.010584 GGAGAGGATAGAGAGAGGCTGAT 59.989 52.174 0.00 0.00 0.00 2.90
980 989 1.779025 GCAGGATCATGCACGCGATT 61.779 55.000 26.38 0.00 45.77 3.34
1336 1347 9.265901 CTGAGAGAAAACACAAGATTTCTAAGA 57.734 33.333 1.12 0.00 44.03 2.10
1350 1361 1.302511 GCCCGCCTGAGAGAAAACA 60.303 57.895 0.00 0.00 0.00 2.83
1388 1399 5.056894 AGTAGTACTAGCAAACTCGTTGG 57.943 43.478 1.87 0.00 37.73 3.77
1405 1416 2.225192 TGGCTGTGGTGGTAGTAGTAGT 60.225 50.000 0.00 0.00 0.00 2.73
1486 1497 1.338769 GCCCAATCGTCCACTAACACT 60.339 52.381 0.00 0.00 0.00 3.55
1509 1520 3.639094 ACCCTAGCTGTTAGCACTATCAG 59.361 47.826 10.21 10.21 45.56 2.90
1712 1727 2.945668 GCTGTTCTTGACAACCTTCTGT 59.054 45.455 0.00 0.00 37.93 3.41
1933 1999 6.189859 ACATGTAGGATTTGAATGGACATGT 58.810 36.000 10.98 10.98 46.69 3.21
1975 2041 2.229792 TGTCTTTCTGTGATGCAACCC 58.770 47.619 0.00 0.00 0.00 4.11
2094 2160 2.099405 CTCCTGTGTGGTTTGTGGTTT 58.901 47.619 0.00 0.00 37.07 3.27
2095 2161 1.684869 CCTCCTGTGTGGTTTGTGGTT 60.685 52.381 0.00 0.00 37.07 3.67
2096 2162 0.106719 CCTCCTGTGTGGTTTGTGGT 60.107 55.000 0.00 0.00 37.07 4.16
2097 2163 0.182537 TCCTCCTGTGTGGTTTGTGG 59.817 55.000 0.00 0.00 37.07 4.17
2098 2164 2.276732 ATCCTCCTGTGTGGTTTGTG 57.723 50.000 0.00 0.00 37.07 3.33
2099 2165 2.443255 AGAATCCTCCTGTGTGGTTTGT 59.557 45.455 0.00 0.00 37.07 2.83
2100 2166 3.146104 AGAATCCTCCTGTGTGGTTTG 57.854 47.619 0.00 0.00 37.07 2.93
2212 2279 7.992754 ATCACTTATTCTGATTATGAAGGGC 57.007 36.000 0.00 0.00 0.00 5.19
2381 2450 2.771089 CTGTGCTGTGAGTACAACCAT 58.229 47.619 0.00 0.00 40.23 3.55
2401 2470 1.453197 CCTATGGTTTGACCCCCGC 60.453 63.158 0.00 0.00 37.50 6.13
2415 2484 4.702131 GGACACAAAGAGCATCAAACCTAT 59.298 41.667 0.00 0.00 37.82 2.57
2505 2574 3.000925 CACACAACAACTACCGAAGACAC 59.999 47.826 0.00 0.00 0.00 3.67
2592 2661 5.461078 CGGAGATGCCAATGATTTGATTTTC 59.539 40.000 0.00 0.00 34.60 2.29
2608 2677 1.520342 GTGGAGTGAGCGGAGATGC 60.520 63.158 0.00 0.00 0.00 3.91
2660 2729 9.860650 TTTGGGAAACATACTATAGTGCATATT 57.139 29.630 15.90 4.35 0.00 1.28
2729 2799 2.805671 TCGACACAACGATGCTTCATTT 59.194 40.909 0.08 0.00 37.37 2.32
2788 2866 7.198390 ACAATTCATTTAATCAAGGATGCTCG 58.802 34.615 0.00 0.00 0.00 5.03
2880 2959 7.114095 GGTTGGAAAGGTCATGGTATACTAAA 58.886 38.462 2.25 0.00 0.00 1.85
2914 2994 4.751767 TTTCACAGAATTTTGGCAACCT 57.248 36.364 0.00 0.00 0.00 3.50
2928 3008 7.395190 TGGATGGTAGAAATGAATTTCACAG 57.605 36.000 16.06 0.00 46.50 3.66
2970 3050 1.460267 CGACGACGTTTGAGTTCATGC 60.460 52.381 0.13 0.00 34.56 4.06
3016 3096 8.542080 TCCAAAATTCCTATGAAAATCTTGCAT 58.458 29.630 0.00 0.00 33.32 3.96
3076 3157 0.037232 AACAGCCAAGAGCCGTCTAC 60.037 55.000 0.00 0.00 45.47 2.59
3116 3201 1.260561 CACGCGAGCTAAAAACTGTGT 59.739 47.619 15.93 0.00 0.00 3.72
3165 3251 4.262036 GCACATCCAATGAAGATGATGCAT 60.262 41.667 0.00 0.00 43.15 3.96
3257 3370 4.431416 AGGATCATGCCCGTAAATAACA 57.569 40.909 0.00 0.00 0.00 2.41
3258 3371 5.067283 ACAAAGGATCATGCCCGTAAATAAC 59.933 40.000 0.00 0.00 0.00 1.89
3259 3372 5.067153 CACAAAGGATCATGCCCGTAAATAA 59.933 40.000 0.00 0.00 0.00 1.40
3260 3373 4.578516 CACAAAGGATCATGCCCGTAAATA 59.421 41.667 0.00 0.00 0.00 1.40
3261 3374 3.381272 CACAAAGGATCATGCCCGTAAAT 59.619 43.478 0.00 0.00 0.00 1.40
3262 3375 2.752354 CACAAAGGATCATGCCCGTAAA 59.248 45.455 0.00 0.00 0.00 2.01
3263 3376 2.290641 ACACAAAGGATCATGCCCGTAA 60.291 45.455 0.00 0.00 0.00 3.18
3264 3377 1.280710 ACACAAAGGATCATGCCCGTA 59.719 47.619 0.00 0.00 0.00 4.02
3265 3378 0.038166 ACACAAAGGATCATGCCCGT 59.962 50.000 0.00 0.00 0.00 5.28
3266 3379 0.452987 CACACAAAGGATCATGCCCG 59.547 55.000 0.00 0.00 0.00 6.13
3267 3380 1.203052 CACACACAAAGGATCATGCCC 59.797 52.381 0.00 0.00 0.00 5.36
3268 3381 1.403249 GCACACACAAAGGATCATGCC 60.403 52.381 0.00 0.00 0.00 4.40
3269 3382 1.730121 CGCACACACAAAGGATCATGC 60.730 52.381 0.00 0.00 0.00 4.06
3270 3383 1.730121 GCGCACACACAAAGGATCATG 60.730 52.381 0.30 0.00 0.00 3.07
3271 3384 0.523072 GCGCACACACAAAGGATCAT 59.477 50.000 0.30 0.00 0.00 2.45
3272 3385 1.840630 CGCGCACACACAAAGGATCA 61.841 55.000 8.75 0.00 0.00 2.92
3273 3386 1.154413 CGCGCACACACAAAGGATC 60.154 57.895 8.75 0.00 0.00 3.36
3274 3387 1.444119 AACGCGCACACACAAAGGAT 61.444 50.000 5.73 0.00 0.00 3.24
3275 3388 2.109739 AACGCGCACACACAAAGGA 61.110 52.632 5.73 0.00 0.00 3.36
3276 3389 1.938814 CAACGCGCACACACAAAGG 60.939 57.895 5.73 0.00 0.00 3.11
3277 3390 1.938814 CCAACGCGCACACACAAAG 60.939 57.895 5.73 0.00 0.00 2.77
3278 3391 2.101185 CCAACGCGCACACACAAA 59.899 55.556 5.73 0.00 0.00 2.83
3279 3392 3.128188 ACCAACGCGCACACACAA 61.128 55.556 5.73 0.00 0.00 3.33
3280 3393 3.870422 CACCAACGCGCACACACA 61.870 61.111 5.73 0.00 0.00 3.72
3288 3401 1.585002 CACAACCAACACCAACGCG 60.585 57.895 3.53 3.53 0.00 6.01
3323 3436 3.941657 GAGCACACACTCGGCCTCC 62.942 68.421 0.00 0.00 0.00 4.30
3383 3496 8.506168 TTTCCGATGAAGAGCACTTTTATTAT 57.494 30.769 0.00 0.00 36.39 1.28
3409 3522 6.839124 TCAATCCTACAAATCATGCACTTT 57.161 33.333 0.00 0.00 0.00 2.66
3412 3525 6.211515 GGATTCAATCCTACAAATCATGCAC 58.788 40.000 9.43 0.00 46.19 4.57
3554 3674 8.958175 TGATAATGGTTGAATTTGTAACGAAC 57.042 30.769 0.00 0.00 0.00 3.95
3636 3756 9.066892 GCATTGGACTTGAGGATTATTTACATA 57.933 33.333 0.00 0.00 0.00 2.29
3641 3761 5.127682 GGTGCATTGGACTTGAGGATTATTT 59.872 40.000 8.27 0.00 0.00 1.40
3646 3772 1.355381 TGGTGCATTGGACTTGAGGAT 59.645 47.619 8.27 0.00 0.00 3.24
3681 3829 9.941664 ATAATAAATGATTCAGAGCAAACGAAG 57.058 29.630 0.00 0.00 0.00 3.79
3715 3863 9.507329 AGCTCAAAACACTAGAATTTCTGAATA 57.493 29.630 9.22 0.00 0.00 1.75
3720 3868 8.457238 AAAGAGCTCAAAACACTAGAATTTCT 57.543 30.769 17.77 4.03 0.00 2.52
3753 3901 7.944000 TGTTTGGTATATCATGCAACTATCCAT 59.056 33.333 0.00 0.00 0.00 3.41
3762 3910 6.152492 ACAACACATGTTTGGTATATCATGCA 59.848 34.615 18.59 0.00 40.06 3.96
3763 3911 6.563422 ACAACACATGTTTGGTATATCATGC 58.437 36.000 18.59 0.00 40.06 4.06
3798 3946 2.351447 GGCCAGAAGGTTTAGAAAACGC 60.351 50.000 0.00 0.00 37.19 4.84
4133 4309 9.508642 AAAACACCAAAACAGAAGGAAATAAAA 57.491 25.926 0.00 0.00 0.00 1.52
4134 4310 9.508642 AAAAACACCAAAACAGAAGGAAATAAA 57.491 25.926 0.00 0.00 0.00 1.40
4177 4353 8.717717 AGAAATGTGGGAAATGATCTCTATACA 58.282 33.333 0.00 0.00 0.00 2.29
4187 4363 5.305128 AGCAGAAAAGAAATGTGGGAAATGA 59.695 36.000 0.00 0.00 0.00 2.57
4189 4365 5.813513 AGCAGAAAAGAAATGTGGGAAAT 57.186 34.783 0.00 0.00 0.00 2.17
4196 4372 5.596836 TGACCAAAGCAGAAAAGAAATGT 57.403 34.783 0.00 0.00 0.00 2.71
4256 4433 0.178987 TACAAGCTCCCCCGCAAAAA 60.179 50.000 0.00 0.00 0.00 1.94
4257 4434 0.891904 GTACAAGCTCCCCCGCAAAA 60.892 55.000 0.00 0.00 0.00 2.44
4258 4435 1.302993 GTACAAGCTCCCCCGCAAA 60.303 57.895 0.00 0.00 0.00 3.68
4259 4436 2.180159 GAGTACAAGCTCCCCCGCAA 62.180 60.000 0.00 0.00 0.00 4.85
4260 4437 2.606519 AGTACAAGCTCCCCCGCA 60.607 61.111 0.00 0.00 0.00 5.69
4261 4438 2.187163 GAGTACAAGCTCCCCCGC 59.813 66.667 0.00 0.00 0.00 6.13
4266 4443 6.565248 TGGAACAAAGGGAGTACAAGCTCC 62.565 50.000 3.67 3.67 45.16 4.70
4267 4444 3.075148 GGAACAAAGGGAGTACAAGCTC 58.925 50.000 0.00 0.00 34.89 4.09
4268 4445 2.441750 TGGAACAAAGGGAGTACAAGCT 59.558 45.455 0.00 0.00 31.92 3.74
4269 4446 2.858745 TGGAACAAAGGGAGTACAAGC 58.141 47.619 0.00 0.00 31.92 4.01
4665 4847 3.810386 TCCACAATAGATCTCTCGAGACG 59.190 47.826 12.08 8.24 40.75 4.18
4740 4922 3.671459 CACGTACGCAAATAAGACACAGA 59.329 43.478 16.72 0.00 0.00 3.41
4741 4923 3.427528 ACACGTACGCAAATAAGACACAG 59.572 43.478 16.72 0.00 0.00 3.66
4836 5022 4.457496 ACCATGCGGCAGTCCTCG 62.457 66.667 9.25 0.00 34.57 4.63
4960 5194 1.807142 TGTGCGTTTCGGCAAATATCA 59.193 42.857 0.00 0.00 45.93 2.15
4989 5223 5.011738 TGCTTCTACCATACCCAGCTAATAC 59.988 44.000 0.00 0.00 0.00 1.89
5104 5341 7.384932 CGATGCACAACAGGATATTATAACTCA 59.615 37.037 0.00 0.00 0.00 3.41
5163 5400 0.178068 TGAGAGGCCGAATTAGCACC 59.822 55.000 0.00 0.00 0.00 5.01
5178 5415 1.014044 GCTCGCGGACATGTTTGAGA 61.014 55.000 6.13 11.30 0.00 3.27
5186 5423 2.167219 CGTCAATGCTCGCGGACAT 61.167 57.895 6.13 7.70 0.00 3.06
5187 5424 2.757155 TTCGTCAATGCTCGCGGACA 62.757 55.000 6.13 5.16 0.00 4.02
5195 5432 1.873591 GAGGTGTGTTTCGTCAATGCT 59.126 47.619 0.00 0.00 0.00 3.79
5203 5440 4.261801 AGGGAAATATGAGGTGTGTTTCG 58.738 43.478 0.00 0.00 31.36 3.46
5204 5441 5.501156 AGAGGGAAATATGAGGTGTGTTTC 58.499 41.667 0.00 0.00 0.00 2.78
5206 5443 4.080299 GGAGAGGGAAATATGAGGTGTGTT 60.080 45.833 0.00 0.00 0.00 3.32
5207 5444 3.456277 GGAGAGGGAAATATGAGGTGTGT 59.544 47.826 0.00 0.00 0.00 3.72
5211 5448 3.736094 TGTGGAGAGGGAAATATGAGGT 58.264 45.455 0.00 0.00 0.00 3.85
5236 5473 9.261180 GTTCCGTCAAAAAGATATGAGATATGA 57.739 33.333 0.00 0.00 0.00 2.15
5238 5475 8.432805 AGGTTCCGTCAAAAAGATATGAGATAT 58.567 33.333 0.00 0.00 0.00 1.63
5318 5556 5.187621 TGGGTCCAGTTTCCCTTATTAAG 57.812 43.478 0.00 0.00 43.74 1.85
5414 5652 0.393944 TGTATCTGGCTCGGACGACT 60.394 55.000 0.00 0.00 0.00 4.18
5710 5949 1.593196 GCGCTGAATATAGGTTGGCA 58.407 50.000 0.00 0.00 0.00 4.92
5827 6066 1.545706 GGTCCTTGCTCGAGGAACCT 61.546 60.000 16.06 0.00 45.96 3.50
5850 6089 2.255252 GTTTCAGTTGCGCGGCAT 59.745 55.556 8.83 0.00 38.76 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.