Multiple sequence alignment - TraesCS2A01G389900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G389900 chr2A 100.000 6465 0 0 1 6465 638689858 638683394 0.000000e+00 11939.0
1 TraesCS2A01G389900 chr2A 88.952 525 45 6 2349 2863 638687037 638686516 2.540000e-178 636.0
2 TraesCS2A01G389900 chr2A 88.952 525 45 6 2822 3343 638687510 638686996 2.540000e-178 636.0
3 TraesCS2A01G389900 chr2A 98.355 304 5 0 5466 5769 638684058 638683755 9.540000e-148 534.0
4 TraesCS2A01G389900 chr2A 98.355 304 5 0 5801 6104 638684393 638684090 9.540000e-148 534.0
5 TraesCS2A01G389900 chr2A 85.185 216 28 2 1941 2156 638686708 638686497 1.090000e-52 219.0
6 TraesCS2A01G389900 chr2A 85.185 216 28 2 3151 3362 638687918 638687703 1.090000e-52 219.0
7 TraesCS2A01G389900 chr2A 93.750 112 7 0 1904 2015 638687620 638687509 1.110000e-37 169.0
8 TraesCS2A01G389900 chr2A 93.750 112 7 0 2239 2350 638687955 638687844 1.110000e-37 169.0
9 TraesCS2A01G389900 chr2B 94.116 3841 162 25 1912 5726 582804237 582808039 0.000000e+00 5782.0
10 TraesCS2A01G389900 chr2B 85.950 2121 124 73 3 2024 582801947 582803992 0.000000e+00 2106.0
11 TraesCS2A01G389900 chr2B 86.555 595 67 9 3179 3768 389409709 389410295 1.520000e-180 643.0
12 TraesCS2A01G389900 chr2B 89.062 512 46 3 2822 3331 582804657 582805160 1.530000e-175 627.0
13 TraesCS2A01G389900 chr2B 87.218 532 46 11 2349 2870 582805131 582805650 2.600000e-163 586.0
14 TraesCS2A01G389900 chr2B 82.261 637 58 26 2235 2863 582803867 582804456 3.480000e-137 499.0
15 TraesCS2A01G389900 chr2B 90.968 310 15 4 6169 6465 582808038 582808347 7.810000e-109 405.0
16 TraesCS2A01G389900 chr2B 94.253 261 14 1 5802 6061 582807779 582808039 1.310000e-106 398.0
17 TraesCS2A01G389900 chr2B 81.529 471 56 14 2893 3359 582804029 582804472 6.160000e-95 359.0
18 TraesCS2A01G389900 chr2B 83.691 233 32 3 1921 2153 582805434 582805660 1.410000e-51 215.0
19 TraesCS2A01G389900 chr2B 93.578 109 7 0 1904 2012 582804547 582804655 5.190000e-36 163.0
20 TraesCS2A01G389900 chr2D 96.505 2203 49 12 3336 5514 495097835 495100033 0.000000e+00 3616.0
21 TraesCS2A01G389900 chr2D 94.899 1431 61 9 1912 3339 495096334 495097755 0.000000e+00 2228.0
22 TraesCS2A01G389900 chr2D 89.975 1576 67 38 500 2012 495094495 495096042 0.000000e+00 1951.0
23 TraesCS2A01G389900 chr2D 89.808 520 39 9 2349 2857 495097237 495097753 0.000000e+00 654.0
24 TraesCS2A01G389900 chr2D 89.066 503 17 14 5 501 495093989 495094459 2.010000e-164 590.0
25 TraesCS2A01G389900 chr2D 87.500 512 54 3 2822 3331 495096763 495097266 3.360000e-162 582.0
26 TraesCS2A01G389900 chr2D 92.208 308 13 2 6169 6465 495100316 495100623 5.990000e-115 425.0
27 TraesCS2A01G389900 chr2D 94.510 255 9 4 5476 5726 495100064 495100317 7.860000e-104 388.0
28 TraesCS2A01G389900 chr2D 93.725 255 11 4 5811 6061 495100064 495100317 1.700000e-100 377.0
29 TraesCS2A01G389900 chr2D 78.125 640 85 37 2242 2857 495095937 495096545 7.970000e-94 355.0
30 TraesCS2A01G389900 chr2D 85.308 211 26 3 1921 2131 495097548 495097753 5.080000e-51 213.0
31 TraesCS2A01G389900 chr2D 85.714 196 23 3 2900 3090 495096131 495096326 1.100000e-47 202.0
32 TraesCS2A01G389900 chr2D 95.413 109 5 0 1904 2012 495096653 495096761 2.400000e-39 174.0
33 TraesCS2A01G389900 chr2D 90.000 120 6 4 6057 6174 351973461 351973346 4.040000e-32 150.0
34 TraesCS2A01G389900 chr2D 95.918 49 2 0 5801 5849 495099985 495100033 5.370000e-11 80.5
35 TraesCS2A01G389900 chr2D 100.000 36 0 0 5482 5517 495100035 495100070 4.180000e-07 67.6
36 TraesCS2A01G389900 chr2D 100.000 36 0 0 5817 5852 495100035 495100070 4.180000e-07 67.6
37 TraesCS2A01G389900 chr6D 91.150 113 6 2 6058 6170 302113752 302113644 4.040000e-32 150.0
38 TraesCS2A01G389900 chr6D 90.991 111 6 2 6060 6170 90111256 90111150 5.220000e-31 147.0
39 TraesCS2A01G389900 chr3D 89.916 119 8 2 6056 6174 379826351 379826237 4.040000e-32 150.0
40 TraesCS2A01G389900 chr3B 89.916 119 8 2 6056 6174 495475481 495475595 4.040000e-32 150.0
41 TraesCS2A01G389900 chr3B 92.857 42 3 0 5725 5766 130649045 130649004 1.950000e-05 62.1
42 TraesCS2A01G389900 chr3A 89.916 119 8 2 6056 6174 503822283 503822397 4.040000e-32 150.0
43 TraesCS2A01G389900 chr4B 89.831 118 8 2 6058 6175 362839856 362839969 1.450000e-31 148.0
44 TraesCS2A01G389900 chr4B 88.793 116 9 2 6060 6175 411629680 411629569 8.740000e-29 139.0
45 TraesCS2A01G389900 chr4B 95.238 42 2 0 5725 5766 411629680 411629639 4.180000e-07 67.6
46 TraesCS2A01G389900 chr4B 97.059 34 1 0 5723 5756 664561570 664561537 2.520000e-04 58.4
47 TraesCS2A01G389900 chr4A 90.090 111 7 2 6060 6170 313632314 313632420 2.430000e-29 141.0
48 TraesCS2A01G389900 chr4A 97.500 40 1 0 5727 5766 38812888 38812927 1.160000e-07 69.4
49 TraesCS2A01G389900 chr5D 84.545 110 17 0 1112 1221 494219428 494219319 6.850000e-20 110.0
50 TraesCS2A01G389900 chr5A 84.545 110 17 0 1112 1221 617210538 617210429 6.850000e-20 110.0
51 TraesCS2A01G389900 chr5A 95.238 42 2 0 5725 5766 633856918 633856959 4.180000e-07 67.6
52 TraesCS2A01G389900 chr7B 97.561 41 1 0 5726 5766 695761275 695761315 3.230000e-08 71.3
53 TraesCS2A01G389900 chr7B 100.000 35 0 0 5725 5759 40558890 40558924 1.500000e-06 65.8
54 TraesCS2A01G389900 chr7B 100.000 30 0 0 5725 5754 146819145 146819116 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G389900 chr2A 638683394 638689858 6464 True 11939.00000 11939 100.000000 1 6465 1 chr2A.!!$R1 6464
1 TraesCS2A01G389900 chr2A 638683755 638687955 4200 True 389.50000 636 91.560500 1904 6104 8 chr2A.!!$R2 4200
2 TraesCS2A01G389900 chr2B 582801947 582808347 6400 False 1114.00000 5782 88.262600 3 6465 10 chr2B.!!$F2 6462
3 TraesCS2A01G389900 chr2B 389409709 389410295 586 False 643.00000 643 86.555000 3179 3768 1 chr2B.!!$F1 589
4 TraesCS2A01G389900 chr2D 495093989 495100623 6634 False 748.16875 3616 91.792125 5 6465 16 chr2D.!!$F1 6460

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
335 355 0.178958 GGGGCGGAGGAGAAGATAGA 60.179 60.000 0.0 0.0 0.0 1.98 F
1247 1383 1.065551 GCGCTCTCTTCTCTTCTCTCC 59.934 57.143 0.0 0.0 0.0 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1450 1608 0.036010 AGCAAGACAATCCCACGAGG 60.036 55.0 0.0 0.0 0.00 4.63 R
5668 6845 5.472148 TGCCTGAATCTTGCAAAAGTAATG 58.528 37.5 0.0 0.0 30.85 1.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.963338 GTGCTGGCACTGACTGTCC 60.963 63.158 17.19 0.00 43.12 4.02
201 207 1.602605 CCCCACCGTCCTTTTCACC 60.603 63.158 0.00 0.00 0.00 4.02
251 259 4.415332 ACCCTACTCGTGCGTGCG 62.415 66.667 0.00 0.00 0.00 5.34
273 293 2.315901 GCACATGGCGTTCTGTAAAAC 58.684 47.619 0.00 0.00 0.00 2.43
274 294 2.920647 GCACATGGCGTTCTGTAAAACC 60.921 50.000 0.00 0.00 0.00 3.27
285 305 3.771798 TCTGTAAAACCCAAAAACGTGC 58.228 40.909 0.00 0.00 0.00 5.34
286 306 2.861335 CTGTAAAACCCAAAAACGTGCC 59.139 45.455 0.00 0.00 0.00 5.01
293 313 1.212455 CCAAAAACGTGCCGGCTTTC 61.212 55.000 29.70 16.62 0.00 2.62
332 352 2.840102 CGGGGCGGAGGAGAAGAT 60.840 66.667 0.00 0.00 0.00 2.40
333 353 1.530891 CGGGGCGGAGGAGAAGATA 60.531 63.158 0.00 0.00 0.00 1.98
334 354 1.528292 CGGGGCGGAGGAGAAGATAG 61.528 65.000 0.00 0.00 0.00 2.08
335 355 0.178958 GGGGCGGAGGAGAAGATAGA 60.179 60.000 0.00 0.00 0.00 1.98
336 356 1.705873 GGGCGGAGGAGAAGATAGAA 58.294 55.000 0.00 0.00 0.00 2.10
337 357 1.616374 GGGCGGAGGAGAAGATAGAAG 59.384 57.143 0.00 0.00 0.00 2.85
338 358 2.588620 GGCGGAGGAGAAGATAGAAGA 58.411 52.381 0.00 0.00 0.00 2.87
339 359 3.161866 GGCGGAGGAGAAGATAGAAGAT 58.838 50.000 0.00 0.00 0.00 2.40
340 360 3.056891 GGCGGAGGAGAAGATAGAAGATG 60.057 52.174 0.00 0.00 0.00 2.90
341 361 3.572255 GCGGAGGAGAAGATAGAAGATGT 59.428 47.826 0.00 0.00 0.00 3.06
342 362 4.762765 GCGGAGGAGAAGATAGAAGATGTA 59.237 45.833 0.00 0.00 0.00 2.29
343 363 5.106317 GCGGAGGAGAAGATAGAAGATGTAG 60.106 48.000 0.00 0.00 0.00 2.74
344 364 6.234920 CGGAGGAGAAGATAGAAGATGTAGA 58.765 44.000 0.00 0.00 0.00 2.59
359 379 8.481314 AGAAGATGTAGAAGATAGATGCAAACA 58.519 33.333 0.00 0.00 0.00 2.83
465 492 4.377661 CGAAAAGCGCGCCGGAAA 62.378 61.111 30.33 0.00 0.00 3.13
467 494 3.946305 GAAAAGCGCGCCGGAAAGG 62.946 63.158 30.33 0.00 44.97 3.11
501 528 4.101448 ATGCCCCGACTGACAGGC 62.101 66.667 7.51 1.93 45.96 4.85
515 579 2.040278 AGGCCCCACAGAGAGAGG 59.960 66.667 0.00 0.00 0.00 3.69
583 647 4.437587 CCCTTCCCTGGCTGGCTG 62.438 72.222 4.64 1.43 0.00 4.85
584 648 4.437587 CCTTCCCTGGCTGGCTGG 62.438 72.222 18.48 18.48 0.00 4.85
615 679 2.278857 CCCGATTCACCTCGCTCG 60.279 66.667 0.00 0.00 37.33 5.03
653 717 3.848917 GCGATCGTGAGTAATTACGCTCT 60.849 47.826 17.81 2.63 41.25 4.09
657 721 6.129769 CGATCGTGAGTAATTACGCTCTAAAC 60.130 42.308 18.40 8.35 39.94 2.01
658 722 6.187125 TCGTGAGTAATTACGCTCTAAACT 57.813 37.500 18.40 0.00 39.94 2.66
659 723 6.025896 TCGTGAGTAATTACGCTCTAAACTG 58.974 40.000 18.40 6.59 39.94 3.16
660 724 5.275788 CGTGAGTAATTACGCTCTAAACTGC 60.276 44.000 18.40 0.00 33.25 4.40
663 740 5.484715 AGTAATTACGCTCTAAACTGCCAA 58.515 37.500 9.91 0.00 0.00 4.52
669 746 2.419297 CGCTCTAAACTGCCAAGATCCT 60.419 50.000 0.00 0.00 0.00 3.24
681 758 5.601662 TGCCAAGATCCTTCTAACTAATCG 58.398 41.667 0.00 0.00 0.00 3.34
693 772 7.201591 CCTTCTAACTAATCGTCGTCTCAACTA 60.202 40.741 0.00 0.00 0.00 2.24
724 821 1.210413 CGTCGTCTGGTCCAGTCAG 59.790 63.158 18.65 10.97 32.61 3.51
843 955 4.722279 CCCTATTAATACCATCCTCCTCCC 59.278 50.000 0.00 0.00 0.00 4.30
1082 1195 1.546998 GGCCGGGGAAGAAAAGAAGAA 60.547 52.381 2.18 0.00 0.00 2.52
1084 1197 2.814469 GCCGGGGAAGAAAAGAAGAAGT 60.814 50.000 2.18 0.00 0.00 3.01
1085 1198 3.487372 CCGGGGAAGAAAAGAAGAAGTT 58.513 45.455 0.00 0.00 0.00 2.66
1086 1199 4.648651 CCGGGGAAGAAAAGAAGAAGTTA 58.351 43.478 0.00 0.00 0.00 2.24
1088 1201 4.154375 CGGGGAAGAAAAGAAGAAGTTAGC 59.846 45.833 0.00 0.00 0.00 3.09
1089 1202 4.459685 GGGGAAGAAAAGAAGAAGTTAGCC 59.540 45.833 0.00 0.00 0.00 3.93
1241 1377 2.183046 GCCGCGCTCTCTTCTCTT 59.817 61.111 5.56 0.00 0.00 2.85
1242 1378 1.876263 GCCGCGCTCTCTTCTCTTC 60.876 63.158 5.56 0.00 0.00 2.87
1247 1383 1.065551 GCGCTCTCTTCTCTTCTCTCC 59.934 57.143 0.00 0.00 0.00 3.71
1248 1384 2.643551 CGCTCTCTTCTCTTCTCTCCT 58.356 52.381 0.00 0.00 0.00 3.69
1271 1424 1.291877 CGACCGGAGCTTGACTTTGG 61.292 60.000 9.46 0.00 0.00 3.28
1286 1439 7.486232 GCTTGACTTTGGTTGCTTATTATCTTC 59.514 37.037 0.00 0.00 0.00 2.87
1288 1441 6.093495 TGACTTTGGTTGCTTATTATCTTCGG 59.907 38.462 0.00 0.00 0.00 4.30
1289 1442 5.944007 ACTTTGGTTGCTTATTATCTTCGGT 59.056 36.000 0.00 0.00 0.00 4.69
1290 1443 6.433093 ACTTTGGTTGCTTATTATCTTCGGTT 59.567 34.615 0.00 0.00 0.00 4.44
1295 1448 6.349860 GGTTGCTTATTATCTTCGGTTGGTTT 60.350 38.462 0.00 0.00 0.00 3.27
1304 1457 4.274978 TCTTCGGTTGGTTTCTTTCCTTT 58.725 39.130 0.00 0.00 0.00 3.11
1449 1607 3.498481 CGGGATCTCTTCTCATCTCCTCT 60.498 52.174 0.00 0.00 0.00 3.69
1450 1608 4.082125 GGGATCTCTTCTCATCTCCTCTC 58.918 52.174 0.00 0.00 0.00 3.20
1451 1609 4.082125 GGATCTCTTCTCATCTCCTCTCC 58.918 52.174 0.00 0.00 0.00 3.71
1452 1610 4.202609 GGATCTCTTCTCATCTCCTCTCCT 60.203 50.000 0.00 0.00 0.00 3.69
1453 1611 4.437682 TCTCTTCTCATCTCCTCTCCTC 57.562 50.000 0.00 0.00 0.00 3.71
1685 1844 1.740025 CAAAAGAAGAGGCGGATCCAC 59.260 52.381 13.41 0.74 37.29 4.02
1845 2004 7.951347 AGAATCCTTTTTAATGAGAGCATGT 57.049 32.000 0.00 0.00 34.26 3.21
1846 2005 7.769220 AGAATCCTTTTTAATGAGAGCATGTG 58.231 34.615 0.00 0.00 34.26 3.21
1873 2032 5.220739 GCACCTCTGTTATTACAAGCTCATG 60.221 44.000 0.00 0.00 32.92 3.07
1877 2036 8.100791 ACCTCTGTTATTACAAGCTCATGTTTA 58.899 33.333 0.00 0.00 34.75 2.01
1893 2052 7.570507 GCTCATGTTTATGTCGTTAAACTGTCA 60.571 37.037 14.64 0.00 40.89 3.58
1900 2059 9.790389 TTTATGTCGTTAAACTGTCAAAACAAT 57.210 25.926 0.00 0.00 34.24 2.71
1902 2061 6.259638 TGTCGTTAAACTGTCAAAACAATCC 58.740 36.000 0.00 0.00 34.24 3.01
5668 6845 5.606348 TTTGATGGCCCCAAATGTAATAC 57.394 39.130 14.24 0.00 0.00 1.89
5728 6905 5.355350 AGCAACTTATGGCAGACAAATACTC 59.645 40.000 0.00 0.00 0.00 2.59
5729 6906 5.449177 GCAACTTATGGCAGACAAATACTCC 60.449 44.000 0.00 0.00 0.00 3.85
5730 6907 4.781934 ACTTATGGCAGACAAATACTCCC 58.218 43.478 0.00 0.00 0.00 4.30
5731 6908 4.475016 ACTTATGGCAGACAAATACTCCCT 59.525 41.667 0.00 0.00 0.00 4.20
5732 6909 3.567478 ATGGCAGACAAATACTCCCTC 57.433 47.619 0.00 0.00 0.00 4.30
5733 6910 1.559682 TGGCAGACAAATACTCCCTCC 59.440 52.381 0.00 0.00 0.00 4.30
5734 6911 1.840635 GGCAGACAAATACTCCCTCCT 59.159 52.381 0.00 0.00 0.00 3.69
5735 6912 3.039011 GGCAGACAAATACTCCCTCCTA 58.961 50.000 0.00 0.00 0.00 2.94
5736 6913 3.648545 GGCAGACAAATACTCCCTCCTAT 59.351 47.826 0.00 0.00 0.00 2.57
5737 6914 4.262678 GGCAGACAAATACTCCCTCCTATC 60.263 50.000 0.00 0.00 0.00 2.08
5738 6915 4.262678 GCAGACAAATACTCCCTCCTATCC 60.263 50.000 0.00 0.00 0.00 2.59
5739 6916 4.901849 CAGACAAATACTCCCTCCTATCCA 59.098 45.833 0.00 0.00 0.00 3.41
5740 6917 5.545723 CAGACAAATACTCCCTCCTATCCAT 59.454 44.000 0.00 0.00 0.00 3.41
5741 6918 6.726299 CAGACAAATACTCCCTCCTATCCATA 59.274 42.308 0.00 0.00 0.00 2.74
5742 6919 7.401493 CAGACAAATACTCCCTCCTATCCATAT 59.599 40.741 0.00 0.00 0.00 1.78
5743 6920 7.964293 AGACAAATACTCCCTCCTATCCATATT 59.036 37.037 0.00 0.00 0.00 1.28
5744 6921 9.268282 GACAAATACTCCCTCCTATCCATATTA 57.732 37.037 0.00 0.00 0.00 0.98
5745 6922 9.047947 ACAAATACTCCCTCCTATCCATATTAC 57.952 37.037 0.00 0.00 0.00 1.89
5746 6923 9.273137 CAAATACTCCCTCCTATCCATATTACT 57.727 37.037 0.00 0.00 0.00 2.24
5747 6924 9.860393 AAATACTCCCTCCTATCCATATTACTT 57.140 33.333 0.00 0.00 0.00 2.24
5748 6925 8.846423 ATACTCCCTCCTATCCATATTACTTG 57.154 38.462 0.00 0.00 0.00 3.16
5749 6926 6.635021 ACTCCCTCCTATCCATATTACTTGT 58.365 40.000 0.00 0.00 0.00 3.16
5750 6927 6.726764 ACTCCCTCCTATCCATATTACTTGTC 59.273 42.308 0.00 0.00 0.00 3.18
5751 6928 5.715279 TCCCTCCTATCCATATTACTTGTCG 59.285 44.000 0.00 0.00 0.00 4.35
5752 6929 5.411781 CCTCCTATCCATATTACTTGTCGC 58.588 45.833 0.00 0.00 0.00 5.19
5753 6930 5.186021 CCTCCTATCCATATTACTTGTCGCT 59.814 44.000 0.00 0.00 0.00 4.93
5754 6931 6.268825 TCCTATCCATATTACTTGTCGCTC 57.731 41.667 0.00 0.00 0.00 5.03
5755 6932 5.773176 TCCTATCCATATTACTTGTCGCTCA 59.227 40.000 0.00 0.00 0.00 4.26
5756 6933 6.266786 TCCTATCCATATTACTTGTCGCTCAA 59.733 38.462 0.00 0.00 34.61 3.02
5757 6934 6.929049 CCTATCCATATTACTTGTCGCTCAAA 59.071 38.462 0.00 0.00 35.48 2.69
5758 6935 6.604735 ATCCATATTACTTGTCGCTCAAAC 57.395 37.500 0.00 0.00 35.48 2.93
5759 6936 4.565166 TCCATATTACTTGTCGCTCAAACG 59.435 41.667 0.00 0.00 35.48 3.60
5760 6937 4.260212 CCATATTACTTGTCGCTCAAACGG 60.260 45.833 0.00 0.00 35.48 4.44
5761 6938 2.512485 TTACTTGTCGCTCAAACGGA 57.488 45.000 0.00 0.00 35.48 4.69
5762 6939 1.774639 TACTTGTCGCTCAAACGGAC 58.225 50.000 0.00 0.00 35.48 4.79
5763 6940 1.213094 ACTTGTCGCTCAAACGGACG 61.213 55.000 0.00 0.00 35.48 4.79
5764 6941 1.213094 CTTGTCGCTCAAACGGACGT 61.213 55.000 0.00 0.00 35.48 4.34
5765 6942 0.030504 TTGTCGCTCAAACGGACGTA 59.969 50.000 0.00 0.00 32.64 3.57
5766 6943 0.030504 TGTCGCTCAAACGGACGTAA 59.969 50.000 0.00 0.00 0.00 3.18
5767 6944 3.421373 TTGTCGCTCAAACGGACGTAAG 61.421 50.000 0.00 0.00 36.79 2.34
5768 6945 5.874604 TTGTCGCTCAAACGGACGTAAGT 62.875 47.826 0.00 0.00 43.58 2.24
5788 6965 9.504710 CGTAAGTGCTAGATACATCCATATTAC 57.495 37.037 0.00 0.00 0.00 1.89
5791 6968 9.935241 AAGTGCTAGATACATCCATATTACTTG 57.065 33.333 0.00 0.00 0.00 3.16
5792 6969 9.094578 AGTGCTAGATACATCCATATTACTTGT 57.905 33.333 0.00 0.00 0.00 3.16
5793 6970 9.360093 GTGCTAGATACATCCATATTACTTGTC 57.640 37.037 0.00 0.00 0.00 3.18
5794 6971 8.244113 TGCTAGATACATCCATATTACTTGTCG 58.756 37.037 0.00 0.00 0.00 4.35
5795 6972 8.244802 GCTAGATACATCCATATTACTTGTCGT 58.755 37.037 0.00 0.00 0.00 4.34
5798 6975 8.638873 AGATACATCCATATTACTTGTCGTTCA 58.361 33.333 0.00 0.00 0.00 3.18
5799 6976 9.256477 GATACATCCATATTACTTGTCGTTCAA 57.744 33.333 0.00 0.00 34.61 2.69
5800 6977 7.915293 ACATCCATATTACTTGTCGTTCAAA 57.085 32.000 0.00 0.00 35.48 2.69
5801 6978 7.748847 ACATCCATATTACTTGTCGTTCAAAC 58.251 34.615 0.00 0.00 35.48 2.93
5802 6979 7.389330 ACATCCATATTACTTGTCGTTCAAACA 59.611 33.333 0.00 0.00 35.48 2.83
5803 6980 7.359262 TCCATATTACTTGTCGTTCAAACAG 57.641 36.000 0.00 0.00 35.48 3.16
5804 6981 7.156000 TCCATATTACTTGTCGTTCAAACAGA 58.844 34.615 0.00 0.00 35.48 3.41
5805 6982 7.117236 TCCATATTACTTGTCGTTCAAACAGAC 59.883 37.037 9.43 9.43 35.48 3.51
5806 6983 7.095397 CCATATTACTTGTCGTTCAAACAGACA 60.095 37.037 12.96 12.96 39.12 3.41
5807 6984 5.459110 TTACTTGTCGTTCAAACAGACAC 57.541 39.130 15.20 0.00 39.89 3.67
5808 6985 2.347452 ACTTGTCGTTCAAACAGACACG 59.653 45.455 15.20 15.39 39.89 4.49
5809 6986 2.281140 TGTCGTTCAAACAGACACGA 57.719 45.000 12.96 0.00 37.45 4.35
5810 6987 2.816689 TGTCGTTCAAACAGACACGAT 58.183 42.857 12.96 0.00 39.79 3.73
5811 6988 2.538037 TGTCGTTCAAACAGACACGATG 59.462 45.455 12.96 0.00 39.79 3.84
5812 6989 2.096909 GTCGTTCAAACAGACACGATGG 60.097 50.000 0.00 0.00 39.79 3.51
5813 6990 1.194547 CGTTCAAACAGACACGATGGG 59.805 52.381 0.00 0.00 34.73 4.00
5814 6991 2.218603 GTTCAAACAGACACGATGGGT 58.781 47.619 0.00 0.00 0.00 4.51
5815 6992 2.616842 GTTCAAACAGACACGATGGGTT 59.383 45.455 0.00 0.00 0.00 4.11
5816 6993 2.925724 TCAAACAGACACGATGGGTTT 58.074 42.857 0.00 0.00 32.33 3.27
5817 6994 2.616376 TCAAACAGACACGATGGGTTTG 59.384 45.455 8.75 8.75 45.81 2.93
5818 6995 2.341846 AACAGACACGATGGGTTTGT 57.658 45.000 0.00 0.00 35.38 2.83
5819 6996 2.341846 ACAGACACGATGGGTTTGTT 57.658 45.000 0.00 0.00 30.32 2.83
5820 6997 2.218603 ACAGACACGATGGGTTTGTTC 58.781 47.619 0.00 0.00 30.32 3.18
5821 6998 2.158813 ACAGACACGATGGGTTTGTTCT 60.159 45.455 0.00 0.00 30.32 3.01
5822 6999 2.878406 CAGACACGATGGGTTTGTTCTT 59.122 45.455 0.00 0.00 0.00 2.52
5823 7000 3.315191 CAGACACGATGGGTTTGTTCTTT 59.685 43.478 0.00 0.00 0.00 2.52
5824 7001 3.564225 AGACACGATGGGTTTGTTCTTTC 59.436 43.478 0.00 0.00 0.00 2.62
5825 7002 3.551846 ACACGATGGGTTTGTTCTTTCT 58.448 40.909 0.00 0.00 0.00 2.52
5826 7003 3.315191 ACACGATGGGTTTGTTCTTTCTG 59.685 43.478 0.00 0.00 0.00 3.02
5827 7004 3.315191 CACGATGGGTTTGTTCTTTCTGT 59.685 43.478 0.00 0.00 0.00 3.41
5828 7005 3.951680 ACGATGGGTTTGTTCTTTCTGTT 59.048 39.130 0.00 0.00 0.00 3.16
5829 7006 5.008217 CACGATGGGTTTGTTCTTTCTGTTA 59.992 40.000 0.00 0.00 0.00 2.41
5830 7007 5.238650 ACGATGGGTTTGTTCTTTCTGTTAG 59.761 40.000 0.00 0.00 0.00 2.34
5831 7008 4.911514 TGGGTTTGTTCTTTCTGTTAGC 57.088 40.909 0.00 0.00 0.00 3.09
5832 7009 4.532834 TGGGTTTGTTCTTTCTGTTAGCT 58.467 39.130 0.00 0.00 0.00 3.32
5833 7010 5.686753 TGGGTTTGTTCTTTCTGTTAGCTA 58.313 37.500 0.00 0.00 0.00 3.32
5834 7011 6.123651 TGGGTTTGTTCTTTCTGTTAGCTAA 58.876 36.000 0.86 0.86 0.00 3.09
5835 7012 6.775629 TGGGTTTGTTCTTTCTGTTAGCTAAT 59.224 34.615 9.88 0.00 0.00 1.73
5836 7013 7.286775 TGGGTTTGTTCTTTCTGTTAGCTAATT 59.713 33.333 9.88 0.00 0.00 1.40
5837 7014 8.789762 GGGTTTGTTCTTTCTGTTAGCTAATTA 58.210 33.333 9.88 1.43 0.00 1.40
5842 7019 8.883731 TGTTCTTTCTGTTAGCTAATTATCTGC 58.116 33.333 9.88 0.00 0.00 4.26
5843 7020 8.338986 GTTCTTTCTGTTAGCTAATTATCTGCC 58.661 37.037 9.88 0.00 0.00 4.85
5844 7021 6.992715 TCTTTCTGTTAGCTAATTATCTGCCC 59.007 38.462 9.88 0.00 0.00 5.36
5845 7022 6.500589 TTCTGTTAGCTAATTATCTGCCCT 57.499 37.500 9.88 0.00 0.00 5.19
5846 7023 5.858381 TCTGTTAGCTAATTATCTGCCCTG 58.142 41.667 9.88 0.00 0.00 4.45
5847 7024 4.973168 TGTTAGCTAATTATCTGCCCTGG 58.027 43.478 9.88 0.00 0.00 4.45
5848 7025 4.202461 TGTTAGCTAATTATCTGCCCTGGG 60.202 45.833 9.88 8.86 0.00 4.45
5849 7026 2.422746 AGCTAATTATCTGCCCTGGGT 58.577 47.619 15.56 0.00 0.00 4.51
5850 7027 2.785857 AGCTAATTATCTGCCCTGGGTT 59.214 45.455 15.56 0.90 0.00 4.11
5851 7028 2.887152 GCTAATTATCTGCCCTGGGTTG 59.113 50.000 15.56 7.67 0.00 3.77
5852 7029 1.780503 AATTATCTGCCCTGGGTTGC 58.219 50.000 15.56 0.00 0.00 4.17
5853 7030 0.106015 ATTATCTGCCCTGGGTTGCC 60.106 55.000 15.56 0.00 0.00 4.52
5854 7031 1.505151 TTATCTGCCCTGGGTTGCCA 61.505 55.000 15.56 2.38 0.00 4.92
5855 7032 1.505151 TATCTGCCCTGGGTTGCCAA 61.505 55.000 15.56 0.00 0.00 4.52
5856 7033 3.305516 CTGCCCTGGGTTGCCAAC 61.306 66.667 15.56 0.00 0.00 3.77
5857 7034 3.815407 CTGCCCTGGGTTGCCAACT 62.815 63.158 15.56 0.00 0.00 3.16
5858 7035 2.424842 CTGCCCTGGGTTGCCAACTA 62.425 60.000 15.56 0.00 0.00 2.24
5859 7036 1.000359 GCCCTGGGTTGCCAACTAT 60.000 57.895 15.56 0.00 0.00 2.12
5860 7037 1.322538 GCCCTGGGTTGCCAACTATG 61.323 60.000 15.56 0.00 0.00 2.23
5861 7038 0.039618 CCCTGGGTTGCCAACTATGT 59.960 55.000 7.62 0.00 0.00 2.29
5862 7039 1.176527 CCTGGGTTGCCAACTATGTG 58.823 55.000 7.62 0.00 0.00 3.21
5863 7040 1.271871 CCTGGGTTGCCAACTATGTGA 60.272 52.381 7.62 0.00 0.00 3.58
5864 7041 2.621407 CCTGGGTTGCCAACTATGTGAT 60.621 50.000 7.62 0.00 0.00 3.06
5865 7042 2.684881 CTGGGTTGCCAACTATGTGATC 59.315 50.000 7.62 0.00 0.00 2.92
5866 7043 2.308570 TGGGTTGCCAACTATGTGATCT 59.691 45.455 7.62 0.00 0.00 2.75
5867 7044 3.521531 TGGGTTGCCAACTATGTGATCTA 59.478 43.478 7.62 0.00 0.00 1.98
5868 7045 4.130118 GGGTTGCCAACTATGTGATCTAG 58.870 47.826 7.62 0.00 0.00 2.43
5869 7046 4.384208 GGGTTGCCAACTATGTGATCTAGT 60.384 45.833 7.62 0.00 0.00 2.57
5870 7047 5.186198 GGTTGCCAACTATGTGATCTAGTT 58.814 41.667 7.62 0.00 39.42 2.24
5871 7048 5.294552 GGTTGCCAACTATGTGATCTAGTTC 59.705 44.000 7.62 0.00 37.33 3.01
5872 7049 5.939764 TGCCAACTATGTGATCTAGTTCT 57.060 39.130 3.52 0.00 37.33 3.01
5873 7050 5.664457 TGCCAACTATGTGATCTAGTTCTG 58.336 41.667 3.52 1.06 37.33 3.02
5874 7051 5.187772 TGCCAACTATGTGATCTAGTTCTGT 59.812 40.000 3.52 0.00 37.33 3.41
5875 7052 5.521735 GCCAACTATGTGATCTAGTTCTGTG 59.478 44.000 3.52 0.00 37.33 3.66
5876 7053 6.634805 CCAACTATGTGATCTAGTTCTGTGT 58.365 40.000 3.52 0.00 37.33 3.72
5877 7054 6.533012 CCAACTATGTGATCTAGTTCTGTGTG 59.467 42.308 3.52 0.00 37.33 3.82
5878 7055 7.315890 CAACTATGTGATCTAGTTCTGTGTGA 58.684 38.462 3.52 0.00 37.33 3.58
5879 7056 7.652524 ACTATGTGATCTAGTTCTGTGTGAT 57.347 36.000 2.61 0.00 0.00 3.06
5880 7057 8.072321 ACTATGTGATCTAGTTCTGTGTGATT 57.928 34.615 2.61 0.00 0.00 2.57
5881 7058 7.978414 ACTATGTGATCTAGTTCTGTGTGATTG 59.022 37.037 2.61 0.00 0.00 2.67
5882 7059 6.101650 TGTGATCTAGTTCTGTGTGATTGT 57.898 37.500 2.61 0.00 0.00 2.71
5883 7060 7.227049 TGTGATCTAGTTCTGTGTGATTGTA 57.773 36.000 2.61 0.00 0.00 2.41
5884 7061 7.666623 TGTGATCTAGTTCTGTGTGATTGTAA 58.333 34.615 2.61 0.00 0.00 2.41
5885 7062 8.147704 TGTGATCTAGTTCTGTGTGATTGTAAA 58.852 33.333 2.61 0.00 0.00 2.01
5886 7063 8.436200 GTGATCTAGTTCTGTGTGATTGTAAAC 58.564 37.037 2.61 0.00 0.00 2.01
5887 7064 7.602644 TGATCTAGTTCTGTGTGATTGTAAACC 59.397 37.037 2.61 0.00 0.00 3.27
5888 7065 7.062749 TCTAGTTCTGTGTGATTGTAAACCT 57.937 36.000 0.00 0.00 0.00 3.50
5889 7066 7.506114 TCTAGTTCTGTGTGATTGTAAACCTT 58.494 34.615 0.00 0.00 0.00 3.50
5890 7067 6.619801 AGTTCTGTGTGATTGTAAACCTTC 57.380 37.500 0.00 0.00 0.00 3.46
5891 7068 6.119536 AGTTCTGTGTGATTGTAAACCTTCA 58.880 36.000 0.00 0.00 0.00 3.02
5892 7069 6.260936 AGTTCTGTGTGATTGTAAACCTTCAG 59.739 38.462 0.00 0.00 0.00 3.02
5893 7070 5.924356 TCTGTGTGATTGTAAACCTTCAGA 58.076 37.500 0.00 0.00 0.00 3.27
5894 7071 6.533730 TCTGTGTGATTGTAAACCTTCAGAT 58.466 36.000 0.00 0.00 0.00 2.90
5895 7072 6.998074 TCTGTGTGATTGTAAACCTTCAGATT 59.002 34.615 0.00 0.00 0.00 2.40
5896 7073 7.502226 TCTGTGTGATTGTAAACCTTCAGATTT 59.498 33.333 0.00 0.00 0.00 2.17
5897 7074 7.424803 TGTGTGATTGTAAACCTTCAGATTTG 58.575 34.615 0.00 0.00 0.00 2.32
5898 7075 7.068103 TGTGTGATTGTAAACCTTCAGATTTGT 59.932 33.333 0.00 0.00 0.00 2.83
5899 7076 7.920682 GTGTGATTGTAAACCTTCAGATTTGTT 59.079 33.333 0.00 0.00 0.00 2.83
5900 7077 7.920151 TGTGATTGTAAACCTTCAGATTTGTTG 59.080 33.333 0.00 0.00 0.00 3.33
5901 7078 8.134895 GTGATTGTAAACCTTCAGATTTGTTGA 58.865 33.333 0.00 0.00 0.00 3.18
5902 7079 8.690884 TGATTGTAAACCTTCAGATTTGTTGAA 58.309 29.630 0.00 0.00 33.76 2.69
5903 7080 9.696917 GATTGTAAACCTTCAGATTTGTTGAAT 57.303 29.630 0.00 0.00 34.33 2.57
5904 7081 8.870160 TTGTAAACCTTCAGATTTGTTGAATG 57.130 30.769 0.00 0.00 34.33 2.67
5905 7082 8.006298 TGTAAACCTTCAGATTTGTTGAATGT 57.994 30.769 0.00 0.00 35.73 2.71
5906 7083 8.474025 TGTAAACCTTCAGATTTGTTGAATGTT 58.526 29.630 3.78 3.78 41.76 2.71
5907 7084 9.313118 GTAAACCTTCAGATTTGTTGAATGTTT 57.687 29.630 18.35 18.35 45.99 2.83
5909 7086 8.871686 AACCTTCAGATTTGTTGAATGTTTAC 57.128 30.769 3.78 0.00 39.03 2.01
5910 7087 7.433680 ACCTTCAGATTTGTTGAATGTTTACC 58.566 34.615 0.00 0.00 32.01 2.85
5911 7088 7.069331 ACCTTCAGATTTGTTGAATGTTTACCA 59.931 33.333 0.00 0.00 32.01 3.25
5912 7089 7.925483 CCTTCAGATTTGTTGAATGTTTACCAA 59.075 33.333 0.00 0.00 34.33 3.67
5913 7090 9.311916 CTTCAGATTTGTTGAATGTTTACCAAA 57.688 29.630 0.00 0.00 34.33 3.28
5914 7091 9.658799 TTCAGATTTGTTGAATGTTTACCAAAA 57.341 25.926 0.00 0.00 30.03 2.44
5915 7092 9.311916 TCAGATTTGTTGAATGTTTACCAAAAG 57.688 29.630 0.00 0.00 0.00 2.27
5916 7093 9.097257 CAGATTTGTTGAATGTTTACCAAAAGT 57.903 29.630 0.00 0.00 0.00 2.66
5917 7094 9.665719 AGATTTGTTGAATGTTTACCAAAAGTT 57.334 25.926 0.00 0.00 0.00 2.66
5920 7097 9.495572 TTTGTTGAATGTTTACCAAAAGTTTCT 57.504 25.926 0.00 0.00 0.00 2.52
5921 7098 8.472683 TGTTGAATGTTTACCAAAAGTTTCTG 57.527 30.769 0.00 0.00 0.00 3.02
5922 7099 7.547370 TGTTGAATGTTTACCAAAAGTTTCTGG 59.453 33.333 12.51 12.51 38.77 3.86
5923 7100 7.411486 TGAATGTTTACCAAAAGTTTCTGGA 57.589 32.000 18.08 0.00 36.49 3.86
5924 7101 8.017418 TGAATGTTTACCAAAAGTTTCTGGAT 57.983 30.769 18.08 9.00 36.49 3.41
5925 7102 8.482128 TGAATGTTTACCAAAAGTTTCTGGATT 58.518 29.630 18.08 10.06 36.49 3.01
5926 7103 9.325198 GAATGTTTACCAAAAGTTTCTGGATTT 57.675 29.630 18.08 4.68 36.49 2.17
5927 7104 9.679661 AATGTTTACCAAAAGTTTCTGGATTTT 57.320 25.926 18.08 4.42 36.49 1.82
5954 7131 5.878406 TCAAAAAGGTTATTTTGGCCTCA 57.122 34.783 3.32 0.00 45.79 3.86
5955 7132 6.432403 TCAAAAAGGTTATTTTGGCCTCAT 57.568 33.333 3.32 0.00 45.79 2.90
5956 7133 6.836242 TCAAAAAGGTTATTTTGGCCTCATT 58.164 32.000 3.32 0.00 45.79 2.57
5957 7134 6.709846 TCAAAAAGGTTATTTTGGCCTCATTG 59.290 34.615 3.32 0.00 45.79 2.82
5958 7135 4.824479 AAGGTTATTTTGGCCTCATTGG 57.176 40.909 3.32 0.00 39.35 3.16
5959 7136 3.790126 AGGTTATTTTGGCCTCATTGGT 58.210 40.909 3.32 0.00 38.35 3.67
5960 7137 4.167319 AGGTTATTTTGGCCTCATTGGTT 58.833 39.130 3.32 0.00 38.35 3.67
5961 7138 4.597075 AGGTTATTTTGGCCTCATTGGTTT 59.403 37.500 3.32 0.00 38.35 3.27
5962 7139 4.935205 GGTTATTTTGGCCTCATTGGTTTC 59.065 41.667 3.32 0.00 38.35 2.78
5963 7140 5.512232 GGTTATTTTGGCCTCATTGGTTTCA 60.512 40.000 3.32 0.00 38.35 2.69
5964 7141 4.703379 ATTTTGGCCTCATTGGTTTCAA 57.297 36.364 3.32 0.00 38.35 2.69
5965 7142 3.467374 TTTGGCCTCATTGGTTTCAAC 57.533 42.857 3.32 0.00 38.35 3.18
5966 7143 2.079170 TGGCCTCATTGGTTTCAACA 57.921 45.000 3.32 0.00 38.35 3.33
5967 7144 2.607499 TGGCCTCATTGGTTTCAACAT 58.393 42.857 3.32 0.00 38.35 2.71
5968 7145 2.971330 TGGCCTCATTGGTTTCAACATT 59.029 40.909 3.32 0.00 38.35 2.71
5969 7146 3.390639 TGGCCTCATTGGTTTCAACATTT 59.609 39.130 3.32 0.00 38.35 2.32
5970 7147 3.996363 GGCCTCATTGGTTTCAACATTTC 59.004 43.478 0.00 0.00 38.35 2.17
5971 7148 4.262592 GGCCTCATTGGTTTCAACATTTCT 60.263 41.667 0.00 0.00 38.35 2.52
5972 7149 4.687483 GCCTCATTGGTTTCAACATTTCTG 59.313 41.667 0.00 0.00 38.35 3.02
5973 7150 5.232463 CCTCATTGGTTTCAACATTTCTGG 58.768 41.667 0.00 0.00 35.48 3.86
5974 7151 5.221501 CCTCATTGGTTTCAACATTTCTGGT 60.222 40.000 0.00 0.00 35.48 4.00
5975 7152 5.841810 TCATTGGTTTCAACATTTCTGGTC 58.158 37.500 0.00 0.00 35.48 4.02
5976 7153 5.598005 TCATTGGTTTCAACATTTCTGGTCT 59.402 36.000 0.00 0.00 35.48 3.85
5977 7154 4.916983 TGGTTTCAACATTTCTGGTCTG 57.083 40.909 0.00 0.00 0.00 3.51
5978 7155 4.531854 TGGTTTCAACATTTCTGGTCTGA 58.468 39.130 0.00 0.00 0.00 3.27
5979 7156 4.580167 TGGTTTCAACATTTCTGGTCTGAG 59.420 41.667 0.00 0.00 0.00 3.35
5980 7157 4.821805 GGTTTCAACATTTCTGGTCTGAGA 59.178 41.667 0.00 0.00 0.00 3.27
5981 7158 5.474876 GGTTTCAACATTTCTGGTCTGAGAT 59.525 40.000 0.00 0.00 0.00 2.75
5982 7159 6.015940 GGTTTCAACATTTCTGGTCTGAGATT 60.016 38.462 0.00 0.00 0.00 2.40
5983 7160 7.428826 GTTTCAACATTTCTGGTCTGAGATTT 58.571 34.615 0.00 0.00 0.00 2.17
5984 7161 6.564709 TCAACATTTCTGGTCTGAGATTTG 57.435 37.500 0.00 0.00 0.00 2.32
5985 7162 6.298361 TCAACATTTCTGGTCTGAGATTTGA 58.702 36.000 0.00 0.00 0.00 2.69
5986 7163 6.944290 TCAACATTTCTGGTCTGAGATTTGAT 59.056 34.615 0.00 0.00 0.00 2.57
5987 7164 6.754702 ACATTTCTGGTCTGAGATTTGATG 57.245 37.500 0.00 0.00 0.00 3.07
5988 7165 5.651139 ACATTTCTGGTCTGAGATTTGATGG 59.349 40.000 0.00 0.00 0.00 3.51
5989 7166 3.272574 TCTGGTCTGAGATTTGATGGC 57.727 47.619 0.00 0.00 0.00 4.40
5990 7167 2.092753 TCTGGTCTGAGATTTGATGGCC 60.093 50.000 0.00 0.00 0.00 5.36
5991 7168 1.918262 TGGTCTGAGATTTGATGGCCT 59.082 47.619 3.32 0.00 0.00 5.19
5992 7169 2.092753 TGGTCTGAGATTTGATGGCCTC 60.093 50.000 3.32 0.00 0.00 4.70
5993 7170 2.092753 GGTCTGAGATTTGATGGCCTCA 60.093 50.000 3.32 2.06 34.81 3.86
5994 7171 3.614092 GTCTGAGATTTGATGGCCTCAA 58.386 45.455 3.32 8.94 42.15 3.02
6006 7183 8.537728 TTTGATGGCCTCAAATGTAATAGATT 57.462 30.769 19.97 0.00 46.45 2.40
6007 7184 9.639563 TTTGATGGCCTCAAATGTAATAGATTA 57.360 29.630 19.97 1.56 46.45 1.75
6008 7185 8.621532 TGATGGCCTCAAATGTAATAGATTAC 57.378 34.615 3.32 5.61 42.21 1.89
6009 7186 8.439971 TGATGGCCTCAAATGTAATAGATTACT 58.560 33.333 3.32 0.00 42.32 2.24
6010 7187 9.289782 GATGGCCTCAAATGTAATAGATTACTT 57.710 33.333 3.32 4.88 42.32 2.24
6011 7188 9.646522 ATGGCCTCAAATGTAATAGATTACTTT 57.353 29.630 3.32 9.80 42.32 2.66
6012 7189 9.474313 TGGCCTCAAATGTAATAGATTACTTTT 57.526 29.630 3.32 15.36 44.46 2.27
6025 7202 5.958955 AGATTACTTTTGCAAGATTCAGGC 58.041 37.500 0.00 0.00 33.72 4.85
6026 7203 5.477984 AGATTACTTTTGCAAGATTCAGGCA 59.522 36.000 0.00 0.00 33.72 4.75
6027 7204 5.528043 TTACTTTTGCAAGATTCAGGCAA 57.472 34.783 9.95 9.95 44.97 4.52
6028 7205 4.612264 ACTTTTGCAAGATTCAGGCAAT 57.388 36.364 13.48 0.34 45.81 3.56
6029 7206 4.964593 ACTTTTGCAAGATTCAGGCAATT 58.035 34.783 13.48 2.49 45.81 2.32
6030 7207 4.753107 ACTTTTGCAAGATTCAGGCAATTG 59.247 37.500 13.48 0.00 45.81 2.32
6031 7208 4.603989 TTTGCAAGATTCAGGCAATTGA 57.396 36.364 10.34 0.00 45.81 2.57
6032 7209 3.861276 TGCAAGATTCAGGCAATTGAG 57.139 42.857 10.34 0.00 34.05 3.02
6033 7210 3.423749 TGCAAGATTCAGGCAATTGAGA 58.576 40.909 10.34 0.32 34.05 3.27
6034 7211 3.442625 TGCAAGATTCAGGCAATTGAGAG 59.557 43.478 10.34 0.00 34.05 3.20
6035 7212 3.442977 GCAAGATTCAGGCAATTGAGAGT 59.557 43.478 10.34 0.13 0.00 3.24
6036 7213 4.637534 GCAAGATTCAGGCAATTGAGAGTA 59.362 41.667 10.34 0.00 0.00 2.59
6037 7214 5.298777 GCAAGATTCAGGCAATTGAGAGTAT 59.701 40.000 10.34 0.00 0.00 2.12
6038 7215 6.513066 GCAAGATTCAGGCAATTGAGAGTATC 60.513 42.308 10.34 5.98 0.00 2.24
6039 7216 6.244552 AGATTCAGGCAATTGAGAGTATCA 57.755 37.500 10.34 0.00 37.82 2.15
6040 7217 6.289834 AGATTCAGGCAATTGAGAGTATCAG 58.710 40.000 10.34 0.00 39.68 2.90
6041 7218 5.426689 TTCAGGCAATTGAGAGTATCAGT 57.573 39.130 10.34 0.00 39.68 3.41
6042 7219 6.544928 TTCAGGCAATTGAGAGTATCAGTA 57.455 37.500 10.34 0.00 39.68 2.74
6043 7220 6.544928 TCAGGCAATTGAGAGTATCAGTAA 57.455 37.500 10.34 0.00 39.68 2.24
6044 7221 6.341316 TCAGGCAATTGAGAGTATCAGTAAC 58.659 40.000 10.34 0.00 39.68 2.50
6045 7222 6.155221 TCAGGCAATTGAGAGTATCAGTAACT 59.845 38.462 10.34 0.00 39.68 2.24
6046 7223 6.820656 CAGGCAATTGAGAGTATCAGTAACTT 59.179 38.462 10.34 0.00 39.68 2.66
6047 7224 7.981789 CAGGCAATTGAGAGTATCAGTAACTTA 59.018 37.037 10.34 0.00 39.68 2.24
6048 7225 8.709308 AGGCAATTGAGAGTATCAGTAACTTAT 58.291 33.333 10.34 0.00 39.68 1.73
6049 7226 8.768955 GGCAATTGAGAGTATCAGTAACTTATG 58.231 37.037 10.34 0.00 39.68 1.90
6050 7227 8.768955 GCAATTGAGAGTATCAGTAACTTATGG 58.231 37.037 10.34 0.00 39.68 2.74
6051 7228 8.768955 CAATTGAGAGTATCAGTAACTTATGGC 58.231 37.037 0.00 0.00 39.68 4.40
6052 7229 7.418337 TTGAGAGTATCAGTAACTTATGGCA 57.582 36.000 0.00 0.00 39.68 4.92
6053 7230 7.043961 TGAGAGTATCAGTAACTTATGGCAG 57.956 40.000 0.00 0.00 37.82 4.85
6054 7231 6.833933 TGAGAGTATCAGTAACTTATGGCAGA 59.166 38.462 0.00 0.00 37.82 4.26
6055 7232 7.045126 AGAGTATCAGTAACTTATGGCAGAC 57.955 40.000 0.00 0.00 37.82 3.51
6056 7233 6.607600 AGAGTATCAGTAACTTATGGCAGACA 59.392 38.462 0.00 0.00 37.82 3.41
6057 7234 7.124298 AGAGTATCAGTAACTTATGGCAGACAA 59.876 37.037 0.00 0.00 37.82 3.18
6058 7235 7.620880 AGTATCAGTAACTTATGGCAGACAAA 58.379 34.615 0.00 0.00 0.00 2.83
6059 7236 8.267894 AGTATCAGTAACTTATGGCAGACAAAT 58.732 33.333 0.00 0.00 0.00 2.32
6060 7237 9.542462 GTATCAGTAACTTATGGCAGACAAATA 57.458 33.333 0.00 0.00 0.00 1.40
6061 7238 7.843490 TCAGTAACTTATGGCAGACAAATAC 57.157 36.000 0.00 0.00 0.00 1.89
6062 7239 7.620880 TCAGTAACTTATGGCAGACAAATACT 58.379 34.615 0.00 0.00 0.00 2.12
6104 7281 6.555134 TTGTCGCTCAAACGGACGTAAGTA 62.555 45.833 0.00 0.00 41.79 2.24
6105 7282 7.773213 TTGTCGCTCAAACGGACGTAAGTAT 62.773 44.000 0.00 0.00 41.79 2.12
6135 7312 9.929180 GATGTATTTTAGTGCTAGATACATCCA 57.071 33.333 24.87 8.86 41.21 3.41
6140 7317 9.851686 ATTTTAGTGCTAGATACATCCATTTGA 57.148 29.630 0.00 0.00 0.00 2.69
6141 7318 8.893219 TTTAGTGCTAGATACATCCATTTGAG 57.107 34.615 0.00 0.00 0.00 3.02
6142 7319 5.303971 AGTGCTAGATACATCCATTTGAGC 58.696 41.667 0.00 0.00 0.00 4.26
6143 7320 4.151335 GTGCTAGATACATCCATTTGAGCG 59.849 45.833 0.00 0.00 0.00 5.03
6144 7321 4.039124 TGCTAGATACATCCATTTGAGCGA 59.961 41.667 0.00 0.00 0.00 4.93
6145 7322 4.387256 GCTAGATACATCCATTTGAGCGAC 59.613 45.833 0.00 0.00 0.00 5.19
6146 7323 4.406648 AGATACATCCATTTGAGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
6147 7324 4.769688 AGATACATCCATTTGAGCGACAA 58.230 39.130 0.00 0.00 36.65 3.18
6148 7325 4.813161 AGATACATCCATTTGAGCGACAAG 59.187 41.667 0.00 0.00 39.77 3.16
6149 7326 2.783135 ACATCCATTTGAGCGACAAGT 58.217 42.857 0.00 0.00 39.77 3.16
6150 7327 3.937814 ACATCCATTTGAGCGACAAGTA 58.062 40.909 0.00 0.00 39.77 2.24
6151 7328 4.323417 ACATCCATTTGAGCGACAAGTAA 58.677 39.130 0.00 0.00 39.77 2.24
6152 7329 4.943705 ACATCCATTTGAGCGACAAGTAAT 59.056 37.500 0.00 0.00 39.77 1.89
6153 7330 6.112734 ACATCCATTTGAGCGACAAGTAATA 58.887 36.000 0.00 0.00 39.77 0.98
6154 7331 6.767902 ACATCCATTTGAGCGACAAGTAATAT 59.232 34.615 0.00 0.00 39.77 1.28
6155 7332 6.603237 TCCATTTGAGCGACAAGTAATATG 57.397 37.500 0.00 0.00 39.77 1.78
6156 7333 5.527214 TCCATTTGAGCGACAAGTAATATGG 59.473 40.000 14.97 14.97 40.44 2.74
6157 7334 5.527214 CCATTTGAGCGACAAGTAATATGGA 59.473 40.000 15.57 0.00 41.04 3.41
6158 7335 6.205464 CCATTTGAGCGACAAGTAATATGGAT 59.795 38.462 15.57 0.00 41.04 3.41
6159 7336 7.255242 CCATTTGAGCGACAAGTAATATGGATT 60.255 37.037 15.57 0.00 41.04 3.01
6160 7337 6.603237 TTGAGCGACAAGTAATATGGATTG 57.397 37.500 0.00 0.00 34.20 2.67
6161 7338 5.056480 TGAGCGACAAGTAATATGGATTGG 58.944 41.667 0.00 0.00 0.00 3.16
6162 7339 5.163353 TGAGCGACAAGTAATATGGATTGGA 60.163 40.000 0.00 0.00 0.00 3.53
6163 7340 5.300752 AGCGACAAGTAATATGGATTGGAG 58.699 41.667 0.00 0.00 0.00 3.86
6164 7341 4.452455 GCGACAAGTAATATGGATTGGAGG 59.548 45.833 0.00 0.00 0.00 4.30
6165 7342 4.997395 CGACAAGTAATATGGATTGGAGGG 59.003 45.833 0.00 0.00 0.00 4.30
6166 7343 5.221641 CGACAAGTAATATGGATTGGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
6167 7344 6.192970 ACAAGTAATATGGATTGGAGGGAG 57.807 41.667 0.00 0.00 0.00 4.30
6168 7345 5.672194 ACAAGTAATATGGATTGGAGGGAGT 59.328 40.000 0.00 0.00 0.00 3.85
6169 7346 6.849697 ACAAGTAATATGGATTGGAGGGAGTA 59.150 38.462 0.00 0.00 0.00 2.59
6179 7356 5.104318 GGATTGGAGGGAGTATCAAAGAACT 60.104 44.000 0.00 0.00 36.25 3.01
6224 7401 4.668576 TTTTGCATGAACTGACGAGATC 57.331 40.909 0.00 0.00 0.00 2.75
6232 7409 5.598416 TGAACTGACGAGATCCATACAAT 57.402 39.130 0.00 0.00 0.00 2.71
6258 7435 0.401738 CTCAAGGCAAACCCTCAGGA 59.598 55.000 0.00 0.00 45.62 3.86
6259 7436 1.005215 CTCAAGGCAAACCCTCAGGAT 59.995 52.381 0.00 0.00 45.62 3.24
6349 7537 3.637769 ACAACCCCTAAAACTGCTGAAA 58.362 40.909 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
154 156 3.771110 GAGGAGCATCTGGCCAGGC 62.771 68.421 32.23 26.88 46.50 4.85
167 170 1.324005 GGGGAGTGAACGAGGAGGAG 61.324 65.000 0.00 0.00 0.00 3.69
237 245 3.827784 GCACGCACGCACGAGTAG 61.828 66.667 4.54 0.00 36.70 2.57
251 259 0.871722 TTACAGAACGCCATGTGCAC 59.128 50.000 10.75 10.75 41.33 4.57
262 282 4.031991 GCACGTTTTTGGGTTTTACAGAAC 59.968 41.667 0.00 0.00 0.00 3.01
329 349 9.752228 TGCATCTATCTTCTACATCTTCTATCT 57.248 33.333 0.00 0.00 0.00 1.98
332 352 9.973450 GTTTGCATCTATCTTCTACATCTTCTA 57.027 33.333 0.00 0.00 0.00 2.10
333 353 8.481314 TGTTTGCATCTATCTTCTACATCTTCT 58.519 33.333 0.00 0.00 0.00 2.85
334 354 8.654230 TGTTTGCATCTATCTTCTACATCTTC 57.346 34.615 0.00 0.00 0.00 2.87
335 355 9.453572 TTTGTTTGCATCTATCTTCTACATCTT 57.546 29.630 0.00 0.00 0.00 2.40
336 356 9.453572 TTTTGTTTGCATCTATCTTCTACATCT 57.546 29.630 0.00 0.00 0.00 2.90
342 362 9.415544 GTTGATTTTTGTTTGCATCTATCTTCT 57.584 29.630 0.00 0.00 0.00 2.85
343 363 8.368126 CGTTGATTTTTGTTTGCATCTATCTTC 58.632 33.333 0.00 0.00 0.00 2.87
344 364 7.329226 CCGTTGATTTTTGTTTGCATCTATCTT 59.671 33.333 0.00 0.00 0.00 2.40
359 379 2.287970 GCGTTTCCTCCCGTTGATTTTT 60.288 45.455 0.00 0.00 0.00 1.94
501 528 0.041833 TTCTCCCTCTCTCTGTGGGG 59.958 60.000 0.00 0.00 46.67 4.96
515 579 1.737008 GTGAACGACGGGCTTCTCC 60.737 63.158 0.00 0.00 0.00 3.71
536 600 1.536149 CTCGCTCGTTCCTTCGTTAG 58.464 55.000 0.00 0.00 0.00 2.34
596 660 3.447025 GAGCGAGGTGAATCGGGGG 62.447 68.421 0.00 0.00 42.94 5.40
606 670 2.986413 AGCTGTGTCGAGCGAGGT 60.986 61.111 0.00 0.00 44.24 3.85
615 679 3.044305 GCGGGTCACAGCTGTGTC 61.044 66.667 38.41 33.58 45.76 3.67
653 717 6.374417 AGTTAGAAGGATCTTGGCAGTTTA 57.626 37.500 0.00 0.00 37.10 2.01
657 721 5.694006 CGATTAGTTAGAAGGATCTTGGCAG 59.306 44.000 0.00 0.00 37.10 4.85
658 722 5.128827 ACGATTAGTTAGAAGGATCTTGGCA 59.871 40.000 0.00 0.00 37.10 4.92
659 723 5.602628 ACGATTAGTTAGAAGGATCTTGGC 58.397 41.667 0.00 0.00 37.10 4.52
660 724 5.915758 CGACGATTAGTTAGAAGGATCTTGG 59.084 44.000 0.00 0.00 37.10 3.61
663 740 6.056884 AGACGACGATTAGTTAGAAGGATCT 58.943 40.000 0.00 0.00 39.82 2.75
669 746 6.492007 AGTTGAGACGACGATTAGTTAGAA 57.508 37.500 0.00 0.00 0.00 2.10
1158 1294 4.200283 GAGTCGAGGCCGAGCAGG 62.200 72.222 0.00 0.00 46.52 4.85
1230 1366 2.614057 GCGAGGAGAGAAGAGAAGAGAG 59.386 54.545 0.00 0.00 0.00 3.20
1271 1424 5.813080 ACCAACCGAAGATAATAAGCAAC 57.187 39.130 0.00 0.00 0.00 4.17
1286 1439 2.159170 TGCAAAGGAAAGAAACCAACCG 60.159 45.455 0.00 0.00 0.00 4.44
1288 1441 3.118775 ACCTGCAAAGGAAAGAAACCAAC 60.119 43.478 0.00 0.00 0.00 3.77
1289 1442 3.103742 ACCTGCAAAGGAAAGAAACCAA 58.896 40.909 0.00 0.00 0.00 3.67
1290 1443 2.693074 GACCTGCAAAGGAAAGAAACCA 59.307 45.455 0.00 0.00 0.00 3.67
1295 1448 2.631160 TTCGACCTGCAAAGGAAAGA 57.369 45.000 0.00 0.00 0.00 2.52
1304 1457 1.002257 ATGGTGCATTCGACCTGCA 60.002 52.632 15.83 15.83 46.82 4.41
1450 1608 0.036010 AGCAAGACAATCCCACGAGG 60.036 55.000 0.00 0.00 0.00 4.63
1451 1609 2.093973 AGTAGCAAGACAATCCCACGAG 60.094 50.000 0.00 0.00 0.00 4.18
1452 1610 1.899814 AGTAGCAAGACAATCCCACGA 59.100 47.619 0.00 0.00 0.00 4.35
1453 1611 2.386661 AGTAGCAAGACAATCCCACG 57.613 50.000 0.00 0.00 0.00 4.94
1542 1700 7.406916 TGCTTATCCTTTTAGGGTCACAATAA 58.593 34.615 0.00 0.00 35.59 1.40
1543 1701 6.964464 TGCTTATCCTTTTAGGGTCACAATA 58.036 36.000 0.00 0.00 35.59 1.90
1589 1748 0.388907 CCAAGTTGGCAAGCAATCCG 60.389 55.000 9.46 0.00 0.00 4.18
1670 1829 1.389609 TACCGTGGATCCGCCTCTTC 61.390 60.000 19.63 0.00 37.63 2.87
1677 1836 1.520787 GCCAAGTACCGTGGATCCG 60.521 63.158 15.74 0.00 38.54 4.18
1685 1844 3.261981 ACCTAAGAATGCCAAGTACCG 57.738 47.619 0.00 0.00 0.00 4.02
1845 2004 1.276705 TGTAATAACAGAGGTGCGCCA 59.723 47.619 20.59 0.00 37.19 5.69
1846 2005 2.018542 TGTAATAACAGAGGTGCGCC 57.981 50.000 8.71 8.71 0.00 6.53
1851 2010 6.054860 ACATGAGCTTGTAATAACAGAGGT 57.945 37.500 0.00 0.00 36.83 3.85
1873 2032 8.603983 TGTTTTGACAGTTTAACGACATAAAC 57.396 30.769 12.20 12.20 43.11 2.01
1877 2036 6.915843 GGATTGTTTTGACAGTTTAACGACAT 59.084 34.615 0.00 0.00 0.00 3.06
1893 2052 4.196193 TCGAAGATATGCCGGATTGTTTT 58.804 39.130 5.05 0.00 0.00 2.43
1900 2059 1.001706 CGACTTCGAAGATATGCCGGA 60.002 52.381 31.08 0.00 43.02 5.14
1902 2061 2.121116 ACGACTTCGAAGATATGCCG 57.879 50.000 31.08 21.85 43.02 5.69
5668 6845 5.472148 TGCCTGAATCTTGCAAAAGTAATG 58.528 37.500 0.00 0.00 30.85 1.90
5728 6905 5.624738 GCGACAAGTAATATGGATAGGAGGG 60.625 48.000 0.00 0.00 0.00 4.30
5729 6906 5.186021 AGCGACAAGTAATATGGATAGGAGG 59.814 44.000 0.00 0.00 0.00 4.30
5730 6907 6.071896 TGAGCGACAAGTAATATGGATAGGAG 60.072 42.308 0.00 0.00 0.00 3.69
5731 6908 5.773176 TGAGCGACAAGTAATATGGATAGGA 59.227 40.000 0.00 0.00 0.00 2.94
5732 6909 6.025749 TGAGCGACAAGTAATATGGATAGG 57.974 41.667 0.00 0.00 0.00 2.57
5733 6910 7.358435 CGTTTGAGCGACAAGTAATATGGATAG 60.358 40.741 0.00 0.00 39.77 2.08
5734 6911 6.419710 CGTTTGAGCGACAAGTAATATGGATA 59.580 38.462 0.00 0.00 39.77 2.59
5735 6912 5.234329 CGTTTGAGCGACAAGTAATATGGAT 59.766 40.000 0.00 0.00 39.77 3.41
5736 6913 4.565166 CGTTTGAGCGACAAGTAATATGGA 59.435 41.667 0.00 0.00 39.77 3.41
5737 6914 4.260212 CCGTTTGAGCGACAAGTAATATGG 60.260 45.833 0.00 0.00 39.77 2.74
5738 6915 4.565166 TCCGTTTGAGCGACAAGTAATATG 59.435 41.667 0.00 0.00 39.77 1.78
5739 6916 4.565564 GTCCGTTTGAGCGACAAGTAATAT 59.434 41.667 0.00 0.00 39.77 1.28
5740 6917 3.922240 GTCCGTTTGAGCGACAAGTAATA 59.078 43.478 0.00 0.00 39.77 0.98
5741 6918 2.735134 GTCCGTTTGAGCGACAAGTAAT 59.265 45.455 0.00 0.00 39.77 1.89
5742 6919 2.129607 GTCCGTTTGAGCGACAAGTAA 58.870 47.619 0.00 0.00 39.77 2.24
5743 6920 1.774639 GTCCGTTTGAGCGACAAGTA 58.225 50.000 0.00 0.00 39.77 2.24
5744 6921 1.213094 CGTCCGTTTGAGCGACAAGT 61.213 55.000 0.00 0.00 39.77 3.16
5745 6922 1.213094 ACGTCCGTTTGAGCGACAAG 61.213 55.000 0.00 0.00 39.77 3.16
5746 6923 0.030504 TACGTCCGTTTGAGCGACAA 59.969 50.000 0.00 0.00 36.65 3.18
5747 6924 0.030504 TTACGTCCGTTTGAGCGACA 59.969 50.000 0.00 0.00 0.00 4.35
5748 6925 0.706729 CTTACGTCCGTTTGAGCGAC 59.293 55.000 0.00 0.00 0.00 5.19
5749 6926 0.311790 ACTTACGTCCGTTTGAGCGA 59.688 50.000 0.00 0.00 0.00 4.93
5750 6927 0.433492 CACTTACGTCCGTTTGAGCG 59.567 55.000 0.00 0.00 0.00 5.03
5751 6928 0.163146 GCACTTACGTCCGTTTGAGC 59.837 55.000 0.00 0.00 0.00 4.26
5752 6929 1.779569 AGCACTTACGTCCGTTTGAG 58.220 50.000 0.00 0.00 0.00 3.02
5753 6930 2.553602 TCTAGCACTTACGTCCGTTTGA 59.446 45.455 0.00 0.00 0.00 2.69
5754 6931 2.937591 TCTAGCACTTACGTCCGTTTG 58.062 47.619 0.00 0.00 0.00 2.93
5755 6932 3.863142 ATCTAGCACTTACGTCCGTTT 57.137 42.857 0.00 0.00 0.00 3.60
5756 6933 3.691118 TGTATCTAGCACTTACGTCCGTT 59.309 43.478 0.00 0.00 0.00 4.44
5757 6934 3.273434 TGTATCTAGCACTTACGTCCGT 58.727 45.455 0.00 0.00 0.00 4.69
5758 6935 3.957671 TGTATCTAGCACTTACGTCCG 57.042 47.619 0.00 0.00 0.00 4.79
5759 6936 4.277672 TGGATGTATCTAGCACTTACGTCC 59.722 45.833 17.51 17.51 45.84 4.79
5760 6937 5.434352 TGGATGTATCTAGCACTTACGTC 57.566 43.478 0.00 0.00 33.20 4.34
5761 6938 7.704578 ATATGGATGTATCTAGCACTTACGT 57.295 36.000 0.00 0.00 0.00 3.57
5762 6939 9.504710 GTAATATGGATGTATCTAGCACTTACG 57.495 37.037 0.00 0.00 0.00 3.18
5765 6942 9.935241 CAAGTAATATGGATGTATCTAGCACTT 57.065 33.333 0.00 0.00 0.00 3.16
5766 6943 9.094578 ACAAGTAATATGGATGTATCTAGCACT 57.905 33.333 0.00 0.00 0.00 4.40
5767 6944 9.360093 GACAAGTAATATGGATGTATCTAGCAC 57.640 37.037 0.00 0.00 0.00 4.40
5768 6945 8.244113 CGACAAGTAATATGGATGTATCTAGCA 58.756 37.037 0.00 0.00 0.00 3.49
5769 6946 8.244802 ACGACAAGTAATATGGATGTATCTAGC 58.755 37.037 0.00 0.00 0.00 3.42
5772 6949 8.638873 TGAACGACAAGTAATATGGATGTATCT 58.361 33.333 0.00 0.00 0.00 1.98
5773 6950 8.812147 TGAACGACAAGTAATATGGATGTATC 57.188 34.615 0.00 0.00 0.00 2.24
5774 6951 9.607988 TTTGAACGACAAGTAATATGGATGTAT 57.392 29.630 0.00 0.00 39.77 2.29
5775 6952 8.875803 GTTTGAACGACAAGTAATATGGATGTA 58.124 33.333 0.00 0.00 39.77 2.29
5776 6953 7.389330 TGTTTGAACGACAAGTAATATGGATGT 59.611 33.333 0.00 0.00 39.77 3.06
5777 6954 7.747888 TGTTTGAACGACAAGTAATATGGATG 58.252 34.615 0.00 0.00 39.77 3.51
5778 6955 7.822334 TCTGTTTGAACGACAAGTAATATGGAT 59.178 33.333 0.00 0.00 39.77 3.41
5779 6956 7.117236 GTCTGTTTGAACGACAAGTAATATGGA 59.883 37.037 0.00 0.00 39.77 3.41
5780 6957 7.095397 TGTCTGTTTGAACGACAAGTAATATGG 60.095 37.037 14.48 0.00 38.49 2.74
5781 6958 7.740346 GTGTCTGTTTGAACGACAAGTAATATG 59.260 37.037 16.85 0.00 40.88 1.78
5782 6959 7.358931 CGTGTCTGTTTGAACGACAAGTAATAT 60.359 37.037 16.85 0.00 40.88 1.28
5783 6960 6.074729 CGTGTCTGTTTGAACGACAAGTAATA 60.075 38.462 16.85 0.00 40.88 0.98
5784 6961 5.276678 CGTGTCTGTTTGAACGACAAGTAAT 60.277 40.000 16.85 0.00 40.88 1.89
5785 6962 4.031991 CGTGTCTGTTTGAACGACAAGTAA 59.968 41.667 16.85 0.54 40.88 2.24
5786 6963 3.548668 CGTGTCTGTTTGAACGACAAGTA 59.451 43.478 16.85 0.80 40.88 2.24
5787 6964 2.347452 CGTGTCTGTTTGAACGACAAGT 59.653 45.455 16.85 0.00 40.88 3.16
5788 6965 2.601314 TCGTGTCTGTTTGAACGACAAG 59.399 45.455 16.85 17.64 40.88 3.16
5789 6966 2.608268 TCGTGTCTGTTTGAACGACAA 58.392 42.857 16.85 0.00 40.88 3.18
5790 6967 2.281140 TCGTGTCTGTTTGAACGACA 57.719 45.000 13.49 13.49 39.90 4.35
5791 6968 2.096909 CCATCGTGTCTGTTTGAACGAC 60.097 50.000 0.00 10.02 46.58 4.34
5793 6970 1.194547 CCCATCGTGTCTGTTTGAACG 59.805 52.381 0.00 0.00 37.38 3.95
5794 6971 2.218603 ACCCATCGTGTCTGTTTGAAC 58.781 47.619 0.00 0.00 0.00 3.18
5795 6972 2.631160 ACCCATCGTGTCTGTTTGAA 57.369 45.000 0.00 0.00 0.00 2.69
5796 6973 2.616376 CAAACCCATCGTGTCTGTTTGA 59.384 45.455 7.45 0.00 45.23 2.69
5797 6974 2.357637 ACAAACCCATCGTGTCTGTTTG 59.642 45.455 10.80 10.80 46.82 2.93
5798 6975 2.650322 ACAAACCCATCGTGTCTGTTT 58.350 42.857 0.00 0.00 0.00 2.83
5799 6976 2.341846 ACAAACCCATCGTGTCTGTT 57.658 45.000 0.00 0.00 0.00 3.16
5800 6977 2.158813 AGAACAAACCCATCGTGTCTGT 60.159 45.455 0.00 0.00 0.00 3.41
5801 6978 2.494059 AGAACAAACCCATCGTGTCTG 58.506 47.619 0.00 0.00 0.00 3.51
5802 6979 2.930826 AGAACAAACCCATCGTGTCT 57.069 45.000 0.00 0.00 0.00 3.41
5803 6980 3.564225 AGAAAGAACAAACCCATCGTGTC 59.436 43.478 0.00 0.00 0.00 3.67
5804 6981 3.315191 CAGAAAGAACAAACCCATCGTGT 59.685 43.478 0.00 0.00 0.00 4.49
5805 6982 3.315191 ACAGAAAGAACAAACCCATCGTG 59.685 43.478 0.00 0.00 0.00 4.35
5806 6983 3.551846 ACAGAAAGAACAAACCCATCGT 58.448 40.909 0.00 0.00 0.00 3.73
5807 6984 4.568152 AACAGAAAGAACAAACCCATCG 57.432 40.909 0.00 0.00 0.00 3.84
5808 6985 5.241728 AGCTAACAGAAAGAACAAACCCATC 59.758 40.000 0.00 0.00 0.00 3.51
5809 6986 5.140454 AGCTAACAGAAAGAACAAACCCAT 58.860 37.500 0.00 0.00 0.00 4.00
5810 6987 4.532834 AGCTAACAGAAAGAACAAACCCA 58.467 39.130 0.00 0.00 0.00 4.51
5811 6988 6.628919 TTAGCTAACAGAAAGAACAAACCC 57.371 37.500 0.86 0.00 0.00 4.11
5816 6993 8.883731 GCAGATAATTAGCTAACAGAAAGAACA 58.116 33.333 8.70 0.00 0.00 3.18
5817 6994 8.338986 GGCAGATAATTAGCTAACAGAAAGAAC 58.661 37.037 8.70 0.00 0.00 3.01
5818 6995 7.499232 GGGCAGATAATTAGCTAACAGAAAGAA 59.501 37.037 8.70 0.00 0.00 2.52
5819 6996 6.992715 GGGCAGATAATTAGCTAACAGAAAGA 59.007 38.462 8.70 0.00 0.00 2.52
5820 6997 6.995091 AGGGCAGATAATTAGCTAACAGAAAG 59.005 38.462 8.70 0.00 0.00 2.62
5821 6998 6.767902 CAGGGCAGATAATTAGCTAACAGAAA 59.232 38.462 8.70 0.00 0.00 2.52
5822 6999 6.291377 CAGGGCAGATAATTAGCTAACAGAA 58.709 40.000 8.70 0.00 0.00 3.02
5823 7000 5.221722 CCAGGGCAGATAATTAGCTAACAGA 60.222 44.000 8.70 0.00 0.00 3.41
5824 7001 4.999950 CCAGGGCAGATAATTAGCTAACAG 59.000 45.833 8.70 0.00 0.00 3.16
5825 7002 4.202461 CCCAGGGCAGATAATTAGCTAACA 60.202 45.833 8.70 0.00 0.00 2.41
5826 7003 4.202472 ACCCAGGGCAGATAATTAGCTAAC 60.202 45.833 8.70 0.00 0.00 2.34
5827 7004 3.980698 ACCCAGGGCAGATAATTAGCTAA 59.019 43.478 8.99 8.99 0.00 3.09
5828 7005 3.598264 ACCCAGGGCAGATAATTAGCTA 58.402 45.455 4.91 0.00 0.00 3.32
5829 7006 2.422746 ACCCAGGGCAGATAATTAGCT 58.577 47.619 4.91 0.00 0.00 3.32
5830 7007 2.887152 CAACCCAGGGCAGATAATTAGC 59.113 50.000 4.91 0.00 0.00 3.09
5831 7008 2.887152 GCAACCCAGGGCAGATAATTAG 59.113 50.000 4.91 0.00 0.00 1.73
5832 7009 2.424234 GGCAACCCAGGGCAGATAATTA 60.424 50.000 4.91 0.00 0.00 1.40
5833 7010 1.689258 GGCAACCCAGGGCAGATAATT 60.689 52.381 4.91 0.00 0.00 1.40
5834 7011 0.106015 GGCAACCCAGGGCAGATAAT 60.106 55.000 4.91 0.00 0.00 1.28
5835 7012 1.306296 GGCAACCCAGGGCAGATAA 59.694 57.895 4.91 0.00 0.00 1.75
5836 7013 1.505151 TTGGCAACCCAGGGCAGATA 61.505 55.000 4.91 0.00 43.37 1.98
5837 7014 2.855770 TTGGCAACCCAGGGCAGAT 61.856 57.895 4.91 0.00 43.37 2.90
5838 7015 3.506743 TTGGCAACCCAGGGCAGA 61.507 61.111 4.91 0.00 43.37 4.26
5839 7016 2.424842 TAGTTGGCAACCCAGGGCAG 62.425 60.000 25.81 0.00 43.37 4.85
5840 7017 1.799157 ATAGTTGGCAACCCAGGGCA 61.799 55.000 25.81 4.19 43.37 5.36
5841 7018 1.000359 ATAGTTGGCAACCCAGGGC 60.000 57.895 25.81 0.00 43.37 5.19
5842 7019 0.039618 ACATAGTTGGCAACCCAGGG 59.960 55.000 25.81 2.85 43.37 4.45
5843 7020 1.176527 CACATAGTTGGCAACCCAGG 58.823 55.000 25.81 17.81 43.37 4.45
5844 7021 2.198827 TCACATAGTTGGCAACCCAG 57.801 50.000 25.81 17.41 43.37 4.45
5845 7022 2.308570 AGATCACATAGTTGGCAACCCA 59.691 45.455 25.81 15.07 40.06 4.51
5846 7023 3.004752 AGATCACATAGTTGGCAACCC 57.995 47.619 25.81 3.00 0.00 4.11
5847 7024 4.770795 ACTAGATCACATAGTTGGCAACC 58.229 43.478 25.81 8.67 29.01 3.77
5848 7025 6.036517 CAGAACTAGATCACATAGTTGGCAAC 59.963 42.308 22.48 22.48 42.17 4.17
5849 7026 6.108687 CAGAACTAGATCACATAGTTGGCAA 58.891 40.000 9.83 0.00 42.17 4.52
5850 7027 5.187772 ACAGAACTAGATCACATAGTTGGCA 59.812 40.000 9.83 0.00 42.17 4.92
5851 7028 5.521735 CACAGAACTAGATCACATAGTTGGC 59.478 44.000 9.83 0.00 42.17 4.52
5852 7029 6.533012 CACACAGAACTAGATCACATAGTTGG 59.467 42.308 9.83 5.71 42.17 3.77
5853 7030 7.315890 TCACACAGAACTAGATCACATAGTTG 58.684 38.462 9.83 2.05 42.17 3.16
5854 7031 7.468141 TCACACAGAACTAGATCACATAGTT 57.532 36.000 5.74 5.74 44.21 2.24
5855 7032 7.652524 ATCACACAGAACTAGATCACATAGT 57.347 36.000 0.00 0.00 34.96 2.12
5856 7033 7.978414 ACAATCACACAGAACTAGATCACATAG 59.022 37.037 0.00 0.00 0.00 2.23
5857 7034 7.840931 ACAATCACACAGAACTAGATCACATA 58.159 34.615 0.00 0.00 0.00 2.29
5858 7035 6.705302 ACAATCACACAGAACTAGATCACAT 58.295 36.000 0.00 0.00 0.00 3.21
5859 7036 6.101650 ACAATCACACAGAACTAGATCACA 57.898 37.500 0.00 0.00 0.00 3.58
5860 7037 8.436200 GTTTACAATCACACAGAACTAGATCAC 58.564 37.037 0.00 0.00 0.00 3.06
5861 7038 7.602644 GGTTTACAATCACACAGAACTAGATCA 59.397 37.037 0.00 0.00 0.00 2.92
5862 7039 7.819900 AGGTTTACAATCACACAGAACTAGATC 59.180 37.037 0.00 0.00 0.00 2.75
5863 7040 7.680730 AGGTTTACAATCACACAGAACTAGAT 58.319 34.615 0.00 0.00 0.00 1.98
5864 7041 7.062749 AGGTTTACAATCACACAGAACTAGA 57.937 36.000 0.00 0.00 0.00 2.43
5865 7042 7.441157 TGAAGGTTTACAATCACACAGAACTAG 59.559 37.037 0.00 0.00 0.00 2.57
5866 7043 7.276658 TGAAGGTTTACAATCACACAGAACTA 58.723 34.615 0.00 0.00 0.00 2.24
5867 7044 6.119536 TGAAGGTTTACAATCACACAGAACT 58.880 36.000 0.00 0.00 0.00 3.01
5868 7045 6.260050 TCTGAAGGTTTACAATCACACAGAAC 59.740 38.462 0.00 0.00 0.00 3.01
5869 7046 6.353323 TCTGAAGGTTTACAATCACACAGAA 58.647 36.000 0.00 0.00 0.00 3.02
5870 7047 5.924356 TCTGAAGGTTTACAATCACACAGA 58.076 37.500 0.00 0.00 0.00 3.41
5871 7048 6.808008 ATCTGAAGGTTTACAATCACACAG 57.192 37.500 0.00 0.00 0.00 3.66
5872 7049 7.068103 ACAAATCTGAAGGTTTACAATCACACA 59.932 33.333 0.00 0.00 0.00 3.72
5873 7050 7.425606 ACAAATCTGAAGGTTTACAATCACAC 58.574 34.615 0.00 0.00 0.00 3.82
5874 7051 7.581213 ACAAATCTGAAGGTTTACAATCACA 57.419 32.000 0.00 0.00 0.00 3.58
5875 7052 8.134895 TCAACAAATCTGAAGGTTTACAATCAC 58.865 33.333 0.00 0.00 0.00 3.06
5876 7053 8.231692 TCAACAAATCTGAAGGTTTACAATCA 57.768 30.769 0.00 0.00 0.00 2.57
5877 7054 9.696917 ATTCAACAAATCTGAAGGTTTACAATC 57.303 29.630 0.00 0.00 36.30 2.67
5878 7055 9.480053 CATTCAACAAATCTGAAGGTTTACAAT 57.520 29.630 0.00 0.00 36.30 2.71
5879 7056 8.474025 ACATTCAACAAATCTGAAGGTTTACAA 58.526 29.630 0.00 0.00 43.23 2.41
5880 7057 8.006298 ACATTCAACAAATCTGAAGGTTTACA 57.994 30.769 0.00 0.00 43.23 2.41
5885 7062 7.069331 TGGTAAACATTCAACAAATCTGAAGGT 59.931 33.333 0.00 0.00 46.54 3.50
5886 7063 7.432869 TGGTAAACATTCAACAAATCTGAAGG 58.567 34.615 0.00 0.00 39.76 3.46
5887 7064 8.870160 TTGGTAAACATTCAACAAATCTGAAG 57.130 30.769 0.00 0.00 36.30 3.02
5888 7065 9.658799 TTTTGGTAAACATTCAACAAATCTGAA 57.341 25.926 0.00 0.00 37.22 3.02
5889 7066 9.311916 CTTTTGGTAAACATTCAACAAATCTGA 57.688 29.630 0.00 0.00 0.00 3.27
5890 7067 9.097257 ACTTTTGGTAAACATTCAACAAATCTG 57.903 29.630 0.00 0.00 0.00 2.90
5891 7068 9.665719 AACTTTTGGTAAACATTCAACAAATCT 57.334 25.926 0.00 0.00 0.00 2.40
5894 7071 9.495572 AGAAACTTTTGGTAAACATTCAACAAA 57.504 25.926 0.00 0.00 0.00 2.83
5895 7072 8.930760 CAGAAACTTTTGGTAAACATTCAACAA 58.069 29.630 0.00 0.00 0.00 2.83
5896 7073 7.547370 CCAGAAACTTTTGGTAAACATTCAACA 59.453 33.333 0.00 0.00 0.00 3.33
5897 7074 7.762159 TCCAGAAACTTTTGGTAAACATTCAAC 59.238 33.333 0.00 0.00 35.89 3.18
5898 7075 7.841956 TCCAGAAACTTTTGGTAAACATTCAA 58.158 30.769 0.00 0.00 35.89 2.69
5899 7076 7.411486 TCCAGAAACTTTTGGTAAACATTCA 57.589 32.000 0.00 0.00 35.89 2.57
5900 7077 8.887036 AATCCAGAAACTTTTGGTAAACATTC 57.113 30.769 0.00 0.00 35.89 2.67
5901 7078 9.679661 AAAATCCAGAAACTTTTGGTAAACATT 57.320 25.926 0.00 0.00 35.89 2.71
5928 7105 8.601546 TGAGGCCAAAATAACCTTTTTGATATT 58.398 29.630 5.01 0.00 45.28 1.28
5929 7106 8.144862 TGAGGCCAAAATAACCTTTTTGATAT 57.855 30.769 5.01 0.00 45.28 1.63
5930 7107 7.546250 TGAGGCCAAAATAACCTTTTTGATA 57.454 32.000 5.01 0.00 45.28 2.15
5931 7108 6.432403 TGAGGCCAAAATAACCTTTTTGAT 57.568 33.333 5.01 0.00 45.28 2.57
5932 7109 5.878406 TGAGGCCAAAATAACCTTTTTGA 57.122 34.783 5.01 0.00 45.28 2.69
5933 7110 6.072563 CCAATGAGGCCAAAATAACCTTTTTG 60.073 38.462 5.01 3.31 43.19 2.44
5934 7111 6.003326 CCAATGAGGCCAAAATAACCTTTTT 58.997 36.000 5.01 0.00 32.67 1.94
5935 7112 5.073008 ACCAATGAGGCCAAAATAACCTTTT 59.927 36.000 5.01 0.00 43.14 2.27
5936 7113 4.597075 ACCAATGAGGCCAAAATAACCTTT 59.403 37.500 5.01 0.00 43.14 3.11
5937 7114 4.167319 ACCAATGAGGCCAAAATAACCTT 58.833 39.130 5.01 0.00 43.14 3.50
5938 7115 3.790126 ACCAATGAGGCCAAAATAACCT 58.210 40.909 5.01 0.00 43.14 3.50
5939 7116 4.551702 AACCAATGAGGCCAAAATAACC 57.448 40.909 5.01 0.00 43.14 2.85
5940 7117 5.546526 TGAAACCAATGAGGCCAAAATAAC 58.453 37.500 5.01 0.00 43.14 1.89
5941 7118 5.815233 TGAAACCAATGAGGCCAAAATAA 57.185 34.783 5.01 0.00 43.14 1.40
5942 7119 5.070981 TGTTGAAACCAATGAGGCCAAAATA 59.929 36.000 5.01 0.00 43.14 1.40
5943 7120 4.141528 TGTTGAAACCAATGAGGCCAAAAT 60.142 37.500 5.01 0.00 43.14 1.82
5944 7121 3.198635 TGTTGAAACCAATGAGGCCAAAA 59.801 39.130 5.01 0.00 43.14 2.44
5945 7122 2.768527 TGTTGAAACCAATGAGGCCAAA 59.231 40.909 5.01 0.00 43.14 3.28
5946 7123 2.392662 TGTTGAAACCAATGAGGCCAA 58.607 42.857 5.01 0.00 43.14 4.52
5947 7124 2.079170 TGTTGAAACCAATGAGGCCA 57.921 45.000 5.01 0.00 43.14 5.36
5948 7125 3.683365 AATGTTGAAACCAATGAGGCC 57.317 42.857 0.00 0.00 43.14 5.19
5949 7126 4.687483 CAGAAATGTTGAAACCAATGAGGC 59.313 41.667 0.00 0.00 43.14 4.70
5950 7127 5.221501 ACCAGAAATGTTGAAACCAATGAGG 60.222 40.000 0.00 0.00 45.67 3.86
5951 7128 5.846203 ACCAGAAATGTTGAAACCAATGAG 58.154 37.500 0.00 0.00 0.00 2.90
5952 7129 5.598005 AGACCAGAAATGTTGAAACCAATGA 59.402 36.000 0.00 0.00 0.00 2.57
5953 7130 5.693104 CAGACCAGAAATGTTGAAACCAATG 59.307 40.000 0.00 0.00 0.00 2.82
5954 7131 5.598005 TCAGACCAGAAATGTTGAAACCAAT 59.402 36.000 0.00 0.00 0.00 3.16
5955 7132 4.952957 TCAGACCAGAAATGTTGAAACCAA 59.047 37.500 0.00 0.00 0.00 3.67
5956 7133 4.531854 TCAGACCAGAAATGTTGAAACCA 58.468 39.130 0.00 0.00 0.00 3.67
5957 7134 4.821805 TCTCAGACCAGAAATGTTGAAACC 59.178 41.667 0.00 0.00 0.00 3.27
5958 7135 6.566197 ATCTCAGACCAGAAATGTTGAAAC 57.434 37.500 0.00 0.00 0.00 2.78
5959 7136 7.285172 TCAAATCTCAGACCAGAAATGTTGAAA 59.715 33.333 0.00 0.00 0.00 2.69
5960 7137 6.772233 TCAAATCTCAGACCAGAAATGTTGAA 59.228 34.615 0.00 0.00 0.00 2.69
5961 7138 6.298361 TCAAATCTCAGACCAGAAATGTTGA 58.702 36.000 0.00 0.00 0.00 3.18
5962 7139 6.564709 TCAAATCTCAGACCAGAAATGTTG 57.435 37.500 0.00 0.00 0.00 3.33
5963 7140 6.152323 CCATCAAATCTCAGACCAGAAATGTT 59.848 38.462 0.00 0.00 0.00 2.71
5964 7141 5.651139 CCATCAAATCTCAGACCAGAAATGT 59.349 40.000 0.00 0.00 0.00 2.71
5965 7142 5.450137 GCCATCAAATCTCAGACCAGAAATG 60.450 44.000 0.00 0.00 0.00 2.32
5966 7143 4.643784 GCCATCAAATCTCAGACCAGAAAT 59.356 41.667 0.00 0.00 0.00 2.17
5967 7144 4.012374 GCCATCAAATCTCAGACCAGAAA 58.988 43.478 0.00 0.00 0.00 2.52
5968 7145 3.614092 GCCATCAAATCTCAGACCAGAA 58.386 45.455 0.00 0.00 0.00 3.02
5969 7146 2.092753 GGCCATCAAATCTCAGACCAGA 60.093 50.000 0.00 0.00 0.00 3.86
5970 7147 2.092538 AGGCCATCAAATCTCAGACCAG 60.093 50.000 5.01 0.00 0.00 4.00
5971 7148 1.918262 AGGCCATCAAATCTCAGACCA 59.082 47.619 5.01 0.00 0.00 4.02
5972 7149 2.092753 TGAGGCCATCAAATCTCAGACC 60.093 50.000 5.01 0.00 34.02 3.85
5973 7150 3.272574 TGAGGCCATCAAATCTCAGAC 57.727 47.619 5.01 0.00 34.02 3.51
5982 7159 9.066892 GTAATCTATTACATTTGAGGCCATCAA 57.933 33.333 5.01 9.59 42.48 2.57
5983 7160 8.439971 AGTAATCTATTACATTTGAGGCCATCA 58.560 33.333 5.01 2.70 43.83 3.07
5984 7161 8.854614 AGTAATCTATTACATTTGAGGCCATC 57.145 34.615 5.01 0.00 43.83 3.51
5985 7162 9.646522 AAAGTAATCTATTACATTTGAGGCCAT 57.353 29.630 5.01 0.00 43.83 4.40
5986 7163 9.474313 AAAAGTAATCTATTACATTTGAGGCCA 57.526 29.630 5.01 0.00 43.83 5.36
5999 7176 8.193438 GCCTGAATCTTGCAAAAGTAATCTATT 58.807 33.333 0.00 0.00 0.00 1.73
6000 7177 7.340232 TGCCTGAATCTTGCAAAAGTAATCTAT 59.660 33.333 0.00 0.00 30.85 1.98
6001 7178 6.658816 TGCCTGAATCTTGCAAAAGTAATCTA 59.341 34.615 0.00 0.00 30.85 1.98
6002 7179 5.477984 TGCCTGAATCTTGCAAAAGTAATCT 59.522 36.000 0.00 0.00 30.85 2.40
6003 7180 5.713025 TGCCTGAATCTTGCAAAAGTAATC 58.287 37.500 0.00 0.00 30.85 1.75
6004 7181 5.726980 TGCCTGAATCTTGCAAAAGTAAT 57.273 34.783 0.00 0.00 30.85 1.89
6005 7182 5.528043 TTGCCTGAATCTTGCAAAAGTAA 57.472 34.783 0.00 0.00 41.63 2.24
6006 7183 5.726980 ATTGCCTGAATCTTGCAAAAGTA 57.273 34.783 12.39 0.00 46.82 2.24
6007 7184 4.612264 ATTGCCTGAATCTTGCAAAAGT 57.388 36.364 12.39 0.00 46.82 2.66
6008 7185 4.992319 TCAATTGCCTGAATCTTGCAAAAG 59.008 37.500 12.39 8.96 46.82 2.27
6009 7186 4.958509 TCAATTGCCTGAATCTTGCAAAA 58.041 34.783 12.39 0.00 46.82 2.44
6010 7187 4.281435 TCTCAATTGCCTGAATCTTGCAAA 59.719 37.500 12.39 0.00 46.82 3.68
6012 7189 3.423749 TCTCAATTGCCTGAATCTTGCA 58.576 40.909 0.00 0.00 0.00 4.08
6013 7190 3.442977 ACTCTCAATTGCCTGAATCTTGC 59.557 43.478 0.00 0.00 0.00 4.01
6014 7191 6.541278 TGATACTCTCAATTGCCTGAATCTTG 59.459 38.462 0.00 0.00 0.00 3.02
6015 7192 6.656902 TGATACTCTCAATTGCCTGAATCTT 58.343 36.000 0.00 0.00 0.00 2.40
6016 7193 6.126825 ACTGATACTCTCAATTGCCTGAATCT 60.127 38.462 0.00 0.00 32.14 2.40
6017 7194 6.054295 ACTGATACTCTCAATTGCCTGAATC 58.946 40.000 0.00 2.26 32.14 2.52
6018 7195 5.999044 ACTGATACTCTCAATTGCCTGAAT 58.001 37.500 0.00 0.00 32.14 2.57
6019 7196 5.426689 ACTGATACTCTCAATTGCCTGAA 57.573 39.130 0.00 0.00 32.14 3.02
6020 7197 6.155221 AGTTACTGATACTCTCAATTGCCTGA 59.845 38.462 0.00 0.00 32.14 3.86
6021 7198 6.344500 AGTTACTGATACTCTCAATTGCCTG 58.656 40.000 0.00 0.00 32.14 4.85
6022 7199 6.552445 AGTTACTGATACTCTCAATTGCCT 57.448 37.500 0.00 0.00 32.14 4.75
6023 7200 8.768955 CATAAGTTACTGATACTCTCAATTGCC 58.231 37.037 0.00 0.00 32.14 4.52
6024 7201 8.768955 CCATAAGTTACTGATACTCTCAATTGC 58.231 37.037 0.00 0.00 32.14 3.56
6025 7202 8.768955 GCCATAAGTTACTGATACTCTCAATTG 58.231 37.037 0.00 0.00 32.14 2.32
6026 7203 8.486210 TGCCATAAGTTACTGATACTCTCAATT 58.514 33.333 0.00 0.00 32.14 2.32
6027 7204 8.023021 TGCCATAAGTTACTGATACTCTCAAT 57.977 34.615 0.00 0.00 32.14 2.57
6028 7205 7.342026 TCTGCCATAAGTTACTGATACTCTCAA 59.658 37.037 0.00 0.00 32.14 3.02
6029 7206 6.833933 TCTGCCATAAGTTACTGATACTCTCA 59.166 38.462 0.00 0.00 0.00 3.27
6030 7207 7.142680 GTCTGCCATAAGTTACTGATACTCTC 58.857 42.308 0.00 0.00 0.00 3.20
6031 7208 6.607600 TGTCTGCCATAAGTTACTGATACTCT 59.392 38.462 0.00 0.00 0.00 3.24
6032 7209 6.806751 TGTCTGCCATAAGTTACTGATACTC 58.193 40.000 0.00 0.00 0.00 2.59
6033 7210 6.791867 TGTCTGCCATAAGTTACTGATACT 57.208 37.500 0.00 0.00 0.00 2.12
6034 7211 7.843490 TTTGTCTGCCATAAGTTACTGATAC 57.157 36.000 0.00 0.00 0.00 2.24
6035 7212 9.542462 GTATTTGTCTGCCATAAGTTACTGATA 57.458 33.333 0.00 0.00 0.00 2.15
6036 7213 8.267894 AGTATTTGTCTGCCATAAGTTACTGAT 58.732 33.333 0.00 0.00 0.00 2.90
6037 7214 7.620880 AGTATTTGTCTGCCATAAGTTACTGA 58.379 34.615 0.00 0.00 0.00 3.41
6038 7215 7.011482 GGAGTATTTGTCTGCCATAAGTTACTG 59.989 40.741 0.00 0.00 0.00 2.74
6039 7216 7.048512 GGAGTATTTGTCTGCCATAAGTTACT 58.951 38.462 0.00 0.00 0.00 2.24
6040 7217 6.260271 GGGAGTATTTGTCTGCCATAAGTTAC 59.740 42.308 0.00 0.00 41.89 2.50
6041 7218 6.157994 AGGGAGTATTTGTCTGCCATAAGTTA 59.842 38.462 6.29 0.00 44.15 2.24
6042 7219 5.044846 AGGGAGTATTTGTCTGCCATAAGTT 60.045 40.000 6.29 0.00 44.15 2.66
6043 7220 4.475016 AGGGAGTATTTGTCTGCCATAAGT 59.525 41.667 6.29 0.00 44.15 2.24
6044 7221 5.041191 AGGGAGTATTTGTCTGCCATAAG 57.959 43.478 6.29 0.00 44.15 1.73
6045 7222 4.141482 GGAGGGAGTATTTGTCTGCCATAA 60.141 45.833 6.29 0.00 44.15 1.90
6046 7223 3.391296 GGAGGGAGTATTTGTCTGCCATA 59.609 47.826 6.29 0.00 44.15 2.74
6047 7224 2.173569 GGAGGGAGTATTTGTCTGCCAT 59.826 50.000 6.29 0.00 44.15 4.40
6048 7225 1.559682 GGAGGGAGTATTTGTCTGCCA 59.440 52.381 6.29 0.00 44.15 4.92
6049 7226 1.840635 AGGAGGGAGTATTTGTCTGCC 59.159 52.381 0.00 0.00 42.47 4.85
6050 7227 4.262678 GGATAGGAGGGAGTATTTGTCTGC 60.263 50.000 0.00 0.00 0.00 4.26
6051 7228 4.901849 TGGATAGGAGGGAGTATTTGTCTG 59.098 45.833 0.00 0.00 0.00 3.51
6052 7229 5.157770 TGGATAGGAGGGAGTATTTGTCT 57.842 43.478 0.00 0.00 0.00 3.41
6053 7230 7.741554 ATATGGATAGGAGGGAGTATTTGTC 57.258 40.000 0.00 0.00 0.00 3.18
6054 7231 9.047947 GTAATATGGATAGGAGGGAGTATTTGT 57.952 37.037 0.00 0.00 0.00 2.83
6055 7232 9.273137 AGTAATATGGATAGGAGGGAGTATTTG 57.727 37.037 0.00 0.00 0.00 2.32
6056 7233 9.860393 AAGTAATATGGATAGGAGGGAGTATTT 57.140 33.333 0.00 0.00 0.00 1.40
6057 7234 9.273137 CAAGTAATATGGATAGGAGGGAGTATT 57.727 37.037 0.00 0.00 0.00 1.89
6058 7235 8.410623 ACAAGTAATATGGATAGGAGGGAGTAT 58.589 37.037 0.00 0.00 0.00 2.12
6059 7236 7.776745 ACAAGTAATATGGATAGGAGGGAGTA 58.223 38.462 0.00 0.00 0.00 2.59
6060 7237 6.635021 ACAAGTAATATGGATAGGAGGGAGT 58.365 40.000 0.00 0.00 0.00 3.85
6061 7238 6.127591 CGACAAGTAATATGGATAGGAGGGAG 60.128 46.154 0.00 0.00 0.00 4.30
6062 7239 5.715279 CGACAAGTAATATGGATAGGAGGGA 59.285 44.000 0.00 0.00 0.00 4.20
6114 7291 9.851686 TCAAATGGATGTATCTAGCACTAAAAT 57.148 29.630 0.00 0.00 0.00 1.82
6115 7292 9.330063 CTCAAATGGATGTATCTAGCACTAAAA 57.670 33.333 0.00 0.00 0.00 1.52
6116 7293 7.442364 GCTCAAATGGATGTATCTAGCACTAAA 59.558 37.037 0.00 0.00 0.00 1.85
6117 7294 6.931281 GCTCAAATGGATGTATCTAGCACTAA 59.069 38.462 0.00 0.00 0.00 2.24
6118 7295 6.459066 GCTCAAATGGATGTATCTAGCACTA 58.541 40.000 0.00 0.00 0.00 2.74
6119 7296 5.303971 GCTCAAATGGATGTATCTAGCACT 58.696 41.667 0.00 0.00 0.00 4.40
6120 7297 4.151335 CGCTCAAATGGATGTATCTAGCAC 59.849 45.833 0.00 0.00 0.00 4.40
6121 7298 4.039124 TCGCTCAAATGGATGTATCTAGCA 59.961 41.667 0.00 0.00 0.00 3.49
6122 7299 4.387256 GTCGCTCAAATGGATGTATCTAGC 59.613 45.833 0.00 0.00 0.00 3.42
6123 7300 5.532557 TGTCGCTCAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 0.00 2.43
6124 7301 5.529581 TGTCGCTCAAATGGATGTATCTA 57.470 39.130 0.00 0.00 0.00 1.98
6125 7302 4.406648 TGTCGCTCAAATGGATGTATCT 57.593 40.909 0.00 0.00 0.00 1.98
6126 7303 4.572389 ACTTGTCGCTCAAATGGATGTATC 59.428 41.667 0.00 0.00 35.48 2.24
6127 7304 4.517285 ACTTGTCGCTCAAATGGATGTAT 58.483 39.130 0.00 0.00 35.48 2.29
6128 7305 3.937814 ACTTGTCGCTCAAATGGATGTA 58.062 40.909 0.00 0.00 35.48 2.29
6129 7306 2.783135 ACTTGTCGCTCAAATGGATGT 58.217 42.857 0.00 0.00 35.48 3.06
6130 7307 4.944962 TTACTTGTCGCTCAAATGGATG 57.055 40.909 0.00 0.00 35.48 3.51
6131 7308 6.205464 CCATATTACTTGTCGCTCAAATGGAT 59.795 38.462 11.69 0.01 39.71 3.41
6132 7309 5.527214 CCATATTACTTGTCGCTCAAATGGA 59.473 40.000 11.69 0.00 39.71 3.41
6133 7310 5.527214 TCCATATTACTTGTCGCTCAAATGG 59.473 40.000 11.23 11.23 39.17 3.16
6134 7311 6.603237 TCCATATTACTTGTCGCTCAAATG 57.397 37.500 0.00 0.00 35.48 2.32
6135 7312 7.255242 CCAATCCATATTACTTGTCGCTCAAAT 60.255 37.037 0.00 0.00 35.48 2.32
6136 7313 6.038161 CCAATCCATATTACTTGTCGCTCAAA 59.962 38.462 0.00 0.00 35.48 2.69
6137 7314 5.527214 CCAATCCATATTACTTGTCGCTCAA 59.473 40.000 0.00 0.00 34.61 3.02
6138 7315 5.056480 CCAATCCATATTACTTGTCGCTCA 58.944 41.667 0.00 0.00 0.00 4.26
6139 7316 5.297547 TCCAATCCATATTACTTGTCGCTC 58.702 41.667 0.00 0.00 0.00 5.03
6140 7317 5.290493 TCCAATCCATATTACTTGTCGCT 57.710 39.130 0.00 0.00 0.00 4.93
6141 7318 4.452455 CCTCCAATCCATATTACTTGTCGC 59.548 45.833 0.00 0.00 0.00 5.19
6142 7319 4.997395 CCCTCCAATCCATATTACTTGTCG 59.003 45.833 0.00 0.00 0.00 4.35
6143 7320 6.183361 ACTCCCTCCAATCCATATTACTTGTC 60.183 42.308 0.00 0.00 0.00 3.18
6144 7321 5.672194 ACTCCCTCCAATCCATATTACTTGT 59.328 40.000 0.00 0.00 0.00 3.16
6145 7322 6.192970 ACTCCCTCCAATCCATATTACTTG 57.807 41.667 0.00 0.00 0.00 3.16
6146 7323 7.739444 TGATACTCCCTCCAATCCATATTACTT 59.261 37.037 0.00 0.00 0.00 2.24
6147 7324 7.256399 TGATACTCCCTCCAATCCATATTACT 58.744 38.462 0.00 0.00 0.00 2.24
6148 7325 7.496346 TGATACTCCCTCCAATCCATATTAC 57.504 40.000 0.00 0.00 0.00 1.89
6149 7326 8.518720 TTTGATACTCCCTCCAATCCATATTA 57.481 34.615 0.00 0.00 0.00 0.98
6150 7327 7.295672 TCTTTGATACTCCCTCCAATCCATATT 59.704 37.037 0.00 0.00 0.00 1.28
6151 7328 6.794493 TCTTTGATACTCCCTCCAATCCATAT 59.206 38.462 0.00 0.00 0.00 1.78
6152 7329 6.150332 TCTTTGATACTCCCTCCAATCCATA 58.850 40.000 0.00 0.00 0.00 2.74
6153 7330 4.977739 TCTTTGATACTCCCTCCAATCCAT 59.022 41.667 0.00 0.00 0.00 3.41
6154 7331 4.370776 TCTTTGATACTCCCTCCAATCCA 58.629 43.478 0.00 0.00 0.00 3.41
6155 7332 5.104318 AGTTCTTTGATACTCCCTCCAATCC 60.104 44.000 0.00 0.00 0.00 3.01
6156 7333 5.995446 AGTTCTTTGATACTCCCTCCAATC 58.005 41.667 0.00 0.00 0.00 2.67
6157 7334 6.903534 TCTAGTTCTTTGATACTCCCTCCAAT 59.096 38.462 0.00 0.00 0.00 3.16
6158 7335 6.261435 TCTAGTTCTTTGATACTCCCTCCAA 58.739 40.000 0.00 0.00 0.00 3.53
6159 7336 5.838955 TCTAGTTCTTTGATACTCCCTCCA 58.161 41.667 0.00 0.00 0.00 3.86
6160 7337 6.154706 TGTTCTAGTTCTTTGATACTCCCTCC 59.845 42.308 0.00 0.00 0.00 4.30
6161 7338 7.171630 TGTTCTAGTTCTTTGATACTCCCTC 57.828 40.000 0.00 0.00 0.00 4.30
6162 7339 7.554959 TTGTTCTAGTTCTTTGATACTCCCT 57.445 36.000 0.00 0.00 0.00 4.20
6163 7340 8.669243 CAATTGTTCTAGTTCTTTGATACTCCC 58.331 37.037 0.00 0.00 0.00 4.30
6164 7341 8.178313 GCAATTGTTCTAGTTCTTTGATACTCC 58.822 37.037 7.40 0.00 0.00 3.85
6165 7342 8.721478 TGCAATTGTTCTAGTTCTTTGATACTC 58.279 33.333 7.40 0.00 0.00 2.59
6166 7343 8.621532 TGCAATTGTTCTAGTTCTTTGATACT 57.378 30.769 7.40 0.00 0.00 2.12
6167 7344 9.495754 GATGCAATTGTTCTAGTTCTTTGATAC 57.504 33.333 7.40 0.00 0.00 2.24
6168 7345 9.453572 AGATGCAATTGTTCTAGTTCTTTGATA 57.546 29.630 7.40 0.00 0.00 2.15
6169 7346 8.242053 CAGATGCAATTGTTCTAGTTCTTTGAT 58.758 33.333 7.40 0.00 0.00 2.57
6179 7356 9.598517 AAAAGAAAAACAGATGCAATTGTTCTA 57.401 25.926 16.54 0.00 36.56 2.10
6224 7401 4.701651 TGCCTTGAGACTGAAATTGTATGG 59.298 41.667 0.00 0.00 0.00 2.74
6232 7409 2.091885 AGGGTTTGCCTTGAGACTGAAA 60.092 45.455 0.00 0.00 34.45 2.69
6258 7435 4.228210 AGTCTGAACAATACCACCATCCAT 59.772 41.667 0.00 0.00 0.00 3.41
6259 7436 3.587061 AGTCTGAACAATACCACCATCCA 59.413 43.478 0.00 0.00 0.00 3.41
6327 7515 4.440826 TTCAGCAGTTTTAGGGGTTGTA 57.559 40.909 0.00 0.00 0.00 2.41
6370 7560 2.038952 TCCATCATCGGCAGATTTAGGG 59.961 50.000 0.00 0.00 34.23 3.53
6377 7567 2.965147 TGTTCTATCCATCATCGGCAGA 59.035 45.455 0.00 0.00 0.00 4.26
6380 7570 3.111853 TGTGTTCTATCCATCATCGGC 57.888 47.619 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.