Multiple sequence alignment - TraesCS2A01G381000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G381000 chr2A 100.000 4823 0 0 1 4823 624445921 624450743 0.000000e+00 8907.0
1 TraesCS2A01G381000 chr2A 93.154 3900 189 34 954 4823 624394068 624397919 0.000000e+00 5651.0
2 TraesCS2A01G381000 chr2A 89.300 2757 230 38 996 3729 624458068 624460782 0.000000e+00 3397.0
3 TraesCS2A01G381000 chr2A 88.063 2622 251 41 1165 3751 624359498 624362092 0.000000e+00 3051.0
4 TraesCS2A01G381000 chr2A 96.104 77 3 0 1126 1202 624446998 624447074 5.070000e-25 126.0
5 TraesCS2A01G381000 chr2A 96.104 77 3 0 1078 1154 624447046 624447122 5.070000e-25 126.0
6 TraesCS2A01G381000 chr2A 89.888 89 5 3 746 830 624393902 624393990 1.420000e-20 111.0
7 TraesCS2A01G381000 chr2A 95.122 41 2 0 846 886 624394030 624394070 1.120000e-06 65.8
8 TraesCS2A01G381000 chr2B 94.362 3636 184 6 1205 4823 565188962 565192593 0.000000e+00 5559.0
9 TraesCS2A01G381000 chr2B 92.418 3073 177 19 1205 4221 565076403 565079475 0.000000e+00 4333.0
10 TraesCS2A01G381000 chr2B 90.174 2534 210 26 1210 3732 565210003 565212508 0.000000e+00 3264.0
11 TraesCS2A01G381000 chr2B 87.357 2618 266 40 1165 3751 564920762 564923345 0.000000e+00 2940.0
12 TraesCS2A01G381000 chr2B 91.388 209 13 4 4322 4525 565081064 565081272 1.020000e-71 281.0
13 TraesCS2A01G381000 chr2B 92.453 159 12 0 4213 4371 565080900 565081058 1.350000e-55 228.0
14 TraesCS2A01G381000 chr2B 78.193 321 33 17 518 833 565188350 565188638 2.310000e-38 171.0
15 TraesCS2A01G381000 chr2B 93.023 86 6 0 996 1081 565188774 565188859 5.070000e-25 126.0
16 TraesCS2A01G381000 chr2B 93.023 86 6 0 996 1081 565209841 565209926 5.070000e-25 126.0
17 TraesCS2A01G381000 chr2B 82.353 119 10 7 733 846 565076029 565076141 5.140000e-15 93.5
18 TraesCS2A01G381000 chr2B 85.714 91 8 2 996 1081 565076239 565076329 1.850000e-14 91.6
19 TraesCS2A01G381000 chr2B 95.000 40 2 0 1089 1128 565076364 565076403 4.030000e-06 63.9
20 TraesCS2A01G381000 chr2D 94.086 3534 172 19 996 4500 481688401 481691926 0.000000e+00 5334.0
21 TraesCS2A01G381000 chr2D 94.298 3069 154 8 1126 4174 481655978 481659045 0.000000e+00 4678.0
22 TraesCS2A01G381000 chr2D 90.098 2747 239 24 996 3732 481961257 481963980 0.000000e+00 3535.0
23 TraesCS2A01G381000 chr2D 90.628 2486 200 18 1260 3732 481988424 481990889 0.000000e+00 3269.0
24 TraesCS2A01G381000 chr2D 87.844 2616 255 39 1165 3751 481599556 481602137 0.000000e+00 3011.0
25 TraesCS2A01G381000 chr2D 95.563 293 12 1 4531 4823 481691924 481692215 7.310000e-128 468.0
26 TraesCS2A01G381000 chr2D 87.454 271 18 9 573 833 481655511 481655775 1.010000e-76 298.0
27 TraesCS2A01G381000 chr2D 91.262 206 13 4 4389 4591 481661452 481661655 4.750000e-70 276.0
28 TraesCS2A01G381000 chr2D 88.444 225 26 0 4169 4393 481659605 481659829 6.150000e-69 272.0
29 TraesCS2A01G381000 chr2D 91.713 181 12 2 979 1159 481655882 481656059 1.040000e-61 248.0
30 TraesCS2A01G381000 chr2D 79.403 335 23 17 520 833 481687959 481688268 1.370000e-45 195.0
31 TraesCS2A01G381000 chr2D 92.308 91 7 0 991 1081 481988188 481988278 3.920000e-26 130.0
32 TraesCS2A01G381000 chr2D 92.683 41 3 0 846 886 481655826 481655866 5.210000e-05 60.2
33 TraesCS2A01G381000 chr2D 96.970 33 1 0 1 33 481702817 481702849 6.740000e-04 56.5
34 TraesCS2A01G381000 chr2D 100.000 28 0 0 1 28 481687303 481687330 9.000000e-03 52.8
35 TraesCS2A01G381000 chr7D 88.249 417 41 6 59 468 538352568 538352153 4.340000e-135 492.0
36 TraesCS2A01G381000 chr3B 87.591 411 45 5 59 464 42738779 42739188 5.650000e-129 472.0
37 TraesCS2A01G381000 chr3B 87.229 415 42 10 58 463 800103747 800104159 3.400000e-126 462.0
38 TraesCS2A01G381000 chr3B 86.893 412 44 8 59 464 815466849 815467256 2.050000e-123 453.0
39 TraesCS2A01G381000 chr3A 87.028 424 48 6 44 462 589193783 589194204 5.650000e-129 472.0
40 TraesCS2A01G381000 chr5D 87.621 412 42 6 59 463 505367413 505367004 2.030000e-128 470.0
41 TraesCS2A01G381000 chr1A 86.651 427 45 10 52 470 326025152 326024730 3.400000e-126 462.0
42 TraesCS2A01G381000 chrUn 87.198 414 42 10 58 463 41972866 41973276 1.220000e-125 460.0
43 TraesCS2A01G381000 chr4B 86.925 413 45 7 58 463 663789916 663790326 5.690000e-124 455.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G381000 chr2A 624445921 624450743 4822 False 3053.000000 8907 97.402667 1 4823 3 chr2A.!!$F4 4822
1 TraesCS2A01G381000 chr2A 624458068 624460782 2714 False 3397.000000 3397 89.300000 996 3729 1 chr2A.!!$F2 2733
2 TraesCS2A01G381000 chr2A 624359498 624362092 2594 False 3051.000000 3051 88.063000 1165 3751 1 chr2A.!!$F1 2586
3 TraesCS2A01G381000 chr2A 624393902 624397919 4017 False 1942.600000 5651 92.721333 746 4823 3 chr2A.!!$F3 4077
4 TraesCS2A01G381000 chr2B 564920762 564923345 2583 False 2940.000000 2940 87.357000 1165 3751 1 chr2B.!!$F1 2586
5 TraesCS2A01G381000 chr2B 565188350 565192593 4243 False 1952.000000 5559 88.526000 518 4823 3 chr2B.!!$F3 4305
6 TraesCS2A01G381000 chr2B 565209841 565212508 2667 False 1695.000000 3264 91.598500 996 3732 2 chr2B.!!$F4 2736
7 TraesCS2A01G381000 chr2B 565076029 565081272 5243 False 848.500000 4333 89.887667 733 4525 6 chr2B.!!$F2 3792
8 TraesCS2A01G381000 chr2D 481961257 481963980 2723 False 3535.000000 3535 90.098000 996 3732 1 chr2D.!!$F3 2736
9 TraesCS2A01G381000 chr2D 481599556 481602137 2581 False 3011.000000 3011 87.844000 1165 3751 1 chr2D.!!$F1 2586
10 TraesCS2A01G381000 chr2D 481988188 481990889 2701 False 1699.500000 3269 91.468000 991 3732 2 chr2D.!!$F6 2741
11 TraesCS2A01G381000 chr2D 481687303 481692215 4912 False 1512.450000 5334 92.263000 1 4823 4 chr2D.!!$F5 4822
12 TraesCS2A01G381000 chr2D 481655511 481661655 6144 False 972.033333 4678 90.975667 573 4591 6 chr2D.!!$F4 4018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
456 547 0.039165 CTCCTTGAAGCCAAAACGCC 60.039 55.0 0.0 0.0 0.00 5.68 F
1092 1658 0.179076 TCAGCACATACATCTGCCGG 60.179 55.0 0.0 0.0 33.57 6.13 F
2467 3141 0.391130 GTGCTGCCACCAAGTCGATA 60.391 55.0 0.0 0.0 35.92 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2089 2763 0.892358 CTTCCTTTGGCTGCAGCTCA 60.892 55.000 35.82 27.97 41.70 4.26 R
2659 3333 1.339151 CCGGAGAGGTTTGAAGGAAGG 60.339 57.143 0.00 0.00 34.51 3.46 R
4011 4725 1.199615 TGGATTCACAGGTATGCGGA 58.800 50.000 0.00 0.00 0.00 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 7.423844 TTTGCTAGAATGACTCCATCTTCTA 57.576 36.000 0.00 0.00 31.40 2.10
29 30 6.398234 TGCTAGAATGACTCCATCTTCTAC 57.602 41.667 0.00 0.00 31.40 2.59
30 31 5.893824 TGCTAGAATGACTCCATCTTCTACA 59.106 40.000 0.00 0.00 31.40 2.74
31 32 6.552725 TGCTAGAATGACTCCATCTTCTACAT 59.447 38.462 0.00 0.00 31.40 2.29
32 33 7.725844 TGCTAGAATGACTCCATCTTCTACATA 59.274 37.037 0.00 0.00 31.40 2.29
33 34 8.026607 GCTAGAATGACTCCATCTTCTACATAC 58.973 40.741 0.00 0.00 31.40 2.39
34 35 7.904558 AGAATGACTCCATCTTCTACATACA 57.095 36.000 0.00 0.00 31.40 2.29
35 36 8.489676 AGAATGACTCCATCTTCTACATACAT 57.510 34.615 0.00 0.00 31.40 2.29
36 37 8.932610 AGAATGACTCCATCTTCTACATACATT 58.067 33.333 0.00 0.00 31.40 2.71
37 38 9.202273 GAATGACTCCATCTTCTACATACATTC 57.798 37.037 0.00 0.00 34.48 2.67
38 39 7.904558 TGACTCCATCTTCTACATACATTCT 57.095 36.000 0.00 0.00 0.00 2.40
39 40 8.996651 TGACTCCATCTTCTACATACATTCTA 57.003 34.615 0.00 0.00 0.00 2.10
76 77 7.689953 AAAATGCGAATATTCAATCTTGAGC 57.310 32.000 15.57 8.22 38.61 4.26
77 78 4.818534 TGCGAATATTCAATCTTGAGCC 57.181 40.909 15.57 0.00 38.61 4.70
78 79 3.565482 TGCGAATATTCAATCTTGAGCCC 59.435 43.478 15.57 0.00 38.61 5.19
79 80 3.364366 GCGAATATTCAATCTTGAGCCCG 60.364 47.826 15.57 0.00 38.61 6.13
80 81 3.187227 CGAATATTCAATCTTGAGCCCGG 59.813 47.826 15.57 0.00 38.61 5.73
81 82 2.638480 TATTCAATCTTGAGCCCGGG 57.362 50.000 19.09 19.09 38.61 5.73
82 83 0.753111 ATTCAATCTTGAGCCCGGGC 60.753 55.000 39.29 39.29 38.61 6.13
93 94 4.864334 CCCGGGCTCATCTGCACC 62.864 72.222 8.08 0.00 31.60 5.01
95 96 2.513204 CGGGCTCATCTGCACCTG 60.513 66.667 0.00 0.00 31.60 4.00
96 97 2.124403 GGGCTCATCTGCACCTGG 60.124 66.667 0.00 0.00 34.04 4.45
97 98 2.124403 GGCTCATCTGCACCTGGG 60.124 66.667 0.00 0.00 34.04 4.45
98 99 2.827642 GCTCATCTGCACCTGGGC 60.828 66.667 0.00 0.11 0.00 5.36
99 100 2.672908 CTCATCTGCACCTGGGCA 59.327 61.111 9.10 9.10 42.53 5.36
100 101 1.001764 CTCATCTGCACCTGGGCAA 60.002 57.895 10.39 3.90 44.40 4.52
102 103 1.001764 CATCTGCACCTGGGCAAGA 60.002 57.895 10.39 9.99 44.40 3.02
103 104 0.609957 CATCTGCACCTGGGCAAGAA 60.610 55.000 10.39 1.73 44.40 2.52
106 107 1.354031 TCTGCACCTGGGCAAGAAATA 59.646 47.619 10.39 0.00 44.40 1.40
109 110 3.172339 TGCACCTGGGCAAGAAATAATT 58.828 40.909 7.29 0.00 41.65 1.40
110 111 3.195396 TGCACCTGGGCAAGAAATAATTC 59.805 43.478 7.29 0.00 41.65 2.17
111 112 3.195396 GCACCTGGGCAAGAAATAATTCA 59.805 43.478 0.00 0.00 38.06 2.57
112 113 4.747810 CACCTGGGCAAGAAATAATTCAC 58.252 43.478 0.00 0.00 38.06 3.18
113 114 3.443681 ACCTGGGCAAGAAATAATTCACG 59.556 43.478 0.00 0.00 38.06 4.35
114 115 3.694072 CCTGGGCAAGAAATAATTCACGA 59.306 43.478 0.00 0.00 38.06 4.35
115 116 4.157656 CCTGGGCAAGAAATAATTCACGAA 59.842 41.667 0.00 0.00 38.06 3.85
116 117 5.336372 CCTGGGCAAGAAATAATTCACGAAA 60.336 40.000 0.00 0.00 38.06 3.46
117 118 6.090483 TGGGCAAGAAATAATTCACGAAAA 57.910 33.333 0.00 0.00 38.06 2.29
118 119 6.516718 TGGGCAAGAAATAATTCACGAAAAA 58.483 32.000 0.00 0.00 38.06 1.94
119 120 7.158021 TGGGCAAGAAATAATTCACGAAAAAT 58.842 30.769 0.00 0.00 38.06 1.82
120 121 7.659390 TGGGCAAGAAATAATTCACGAAAAATT 59.341 29.630 0.00 0.00 38.06 1.82
121 122 9.145865 GGGCAAGAAATAATTCACGAAAAATTA 57.854 29.630 0.00 0.00 38.06 1.40
158 249 5.692613 AAATCCAAATTGTTTGTGCATGG 57.307 34.783 0.00 0.00 38.98 3.66
159 250 3.834489 TCCAAATTGTTTGTGCATGGT 57.166 38.095 0.00 0.00 38.98 3.55
160 251 4.944619 TCCAAATTGTTTGTGCATGGTA 57.055 36.364 0.00 0.00 38.98 3.25
161 252 4.880759 TCCAAATTGTTTGTGCATGGTAG 58.119 39.130 0.00 0.00 38.98 3.18
162 253 4.586421 TCCAAATTGTTTGTGCATGGTAGA 59.414 37.500 0.00 0.00 38.98 2.59
163 254 5.245751 TCCAAATTGTTTGTGCATGGTAGAT 59.754 36.000 0.00 0.00 38.98 1.98
164 255 6.435591 TCCAAATTGTTTGTGCATGGTAGATA 59.564 34.615 0.00 0.00 38.98 1.98
165 256 7.039434 TCCAAATTGTTTGTGCATGGTAGATAA 60.039 33.333 0.00 0.00 38.98 1.75
166 257 7.765360 CCAAATTGTTTGTGCATGGTAGATAAT 59.235 33.333 0.00 0.00 38.98 1.28
167 258 9.153721 CAAATTGTTTGTGCATGGTAGATAATT 57.846 29.630 0.00 0.00 35.94 1.40
168 259 9.723601 AAATTGTTTGTGCATGGTAGATAATTT 57.276 25.926 0.00 0.00 0.00 1.82
169 260 8.706492 ATTGTTTGTGCATGGTAGATAATTTG 57.294 30.769 0.00 0.00 0.00 2.32
170 261 6.629128 TGTTTGTGCATGGTAGATAATTTGG 58.371 36.000 0.00 0.00 0.00 3.28
171 262 6.210385 TGTTTGTGCATGGTAGATAATTTGGT 59.790 34.615 0.00 0.00 0.00 3.67
172 263 5.833406 TGTGCATGGTAGATAATTTGGTG 57.167 39.130 0.00 0.00 0.00 4.17
173 264 5.260424 TGTGCATGGTAGATAATTTGGTGT 58.740 37.500 0.00 0.00 0.00 4.16
174 265 5.125257 TGTGCATGGTAGATAATTTGGTGTG 59.875 40.000 0.00 0.00 0.00 3.82
175 266 5.125417 GTGCATGGTAGATAATTTGGTGTGT 59.875 40.000 0.00 0.00 0.00 3.72
176 267 5.125257 TGCATGGTAGATAATTTGGTGTGTG 59.875 40.000 0.00 0.00 0.00 3.82
177 268 5.356751 GCATGGTAGATAATTTGGTGTGTGA 59.643 40.000 0.00 0.00 0.00 3.58
178 269 6.458751 GCATGGTAGATAATTTGGTGTGTGAG 60.459 42.308 0.00 0.00 0.00 3.51
179 270 6.367374 TGGTAGATAATTTGGTGTGTGAGA 57.633 37.500 0.00 0.00 0.00 3.27
180 271 6.957631 TGGTAGATAATTTGGTGTGTGAGAT 58.042 36.000 0.00 0.00 0.00 2.75
181 272 6.823182 TGGTAGATAATTTGGTGTGTGAGATG 59.177 38.462 0.00 0.00 0.00 2.90
182 273 5.824904 AGATAATTTGGTGTGTGAGATGC 57.175 39.130 0.00 0.00 0.00 3.91
183 274 2.995466 AATTTGGTGTGTGAGATGCG 57.005 45.000 0.00 0.00 0.00 4.73
184 275 0.523072 ATTTGGTGTGTGAGATGCGC 59.477 50.000 0.00 0.00 0.00 6.09
185 276 0.534877 TTTGGTGTGTGAGATGCGCT 60.535 50.000 9.73 0.00 0.00 5.92
186 277 0.950555 TTGGTGTGTGAGATGCGCTC 60.951 55.000 9.73 3.60 44.21 5.03
187 278 2.103042 GGTGTGTGAGATGCGCTCC 61.103 63.158 9.73 0.00 43.26 4.70
188 279 1.374631 GTGTGTGAGATGCGCTCCA 60.375 57.895 9.73 0.00 43.26 3.86
189 280 0.950555 GTGTGTGAGATGCGCTCCAA 60.951 55.000 9.73 0.00 43.26 3.53
190 281 0.250252 TGTGTGAGATGCGCTCCAAA 60.250 50.000 9.73 0.00 43.26 3.28
191 282 1.089920 GTGTGAGATGCGCTCCAAAT 58.910 50.000 9.73 0.00 43.26 2.32
192 283 1.470098 GTGTGAGATGCGCTCCAAATT 59.530 47.619 9.73 0.00 43.26 1.82
193 284 2.095059 GTGTGAGATGCGCTCCAAATTT 60.095 45.455 9.73 0.00 43.26 1.82
194 285 2.162208 TGTGAGATGCGCTCCAAATTTC 59.838 45.455 9.73 0.00 43.26 2.17
195 286 2.421424 GTGAGATGCGCTCCAAATTTCT 59.579 45.455 9.73 0.00 43.26 2.52
196 287 2.421073 TGAGATGCGCTCCAAATTTCTG 59.579 45.455 9.73 0.00 43.26 3.02
197 288 2.679837 GAGATGCGCTCCAAATTTCTGA 59.320 45.455 9.73 0.00 37.69 3.27
198 289 2.681848 AGATGCGCTCCAAATTTCTGAG 59.318 45.455 9.73 9.07 0.00 3.35
199 290 0.523072 TGCGCTCCAAATTTCTGAGC 59.477 50.000 21.40 21.40 46.21 4.26
211 302 7.429636 CAAATTTCTGAGCATTTGGACATTT 57.570 32.000 12.98 0.00 36.93 2.32
212 303 7.295201 CAAATTTCTGAGCATTTGGACATTTG 58.705 34.615 12.98 0.00 36.93 2.32
213 304 5.787953 TTTCTGAGCATTTGGACATTTGA 57.212 34.783 0.00 0.00 0.00 2.69
214 305 5.381174 TTCTGAGCATTTGGACATTTGAG 57.619 39.130 0.00 0.00 0.00 3.02
215 306 4.401022 TCTGAGCATTTGGACATTTGAGT 58.599 39.130 0.00 0.00 0.00 3.41
216 307 5.559770 TCTGAGCATTTGGACATTTGAGTA 58.440 37.500 0.00 0.00 0.00 2.59
217 308 5.645067 TCTGAGCATTTGGACATTTGAGTAG 59.355 40.000 0.00 0.00 0.00 2.57
218 309 4.156556 TGAGCATTTGGACATTTGAGTAGC 59.843 41.667 0.00 0.00 0.00 3.58
219 310 4.338879 AGCATTTGGACATTTGAGTAGCT 58.661 39.130 0.00 0.00 0.00 3.32
220 311 4.397417 AGCATTTGGACATTTGAGTAGCTC 59.603 41.667 0.00 0.00 0.00 4.09
221 312 4.397417 GCATTTGGACATTTGAGTAGCTCT 59.603 41.667 0.00 0.00 0.00 4.09
222 313 5.448360 GCATTTGGACATTTGAGTAGCTCTC 60.448 44.000 0.00 0.00 43.03 3.20
258 349 9.003658 CCAATTGGGTCAGAATAGTATATGAAC 57.996 37.037 17.36 5.21 0.00 3.18
259 350 9.559732 CAATTGGGTCAGAATAGTATATGAACA 57.440 33.333 12.84 7.35 30.81 3.18
279 370 8.101654 TGAACAATACACTGTTTAACATACCC 57.898 34.615 0.00 0.00 39.63 3.69
280 371 7.175293 TGAACAATACACTGTTTAACATACCCC 59.825 37.037 0.00 0.00 39.63 4.95
281 372 6.544650 ACAATACACTGTTTAACATACCCCA 58.455 36.000 0.00 0.00 0.00 4.96
282 373 7.005296 ACAATACACTGTTTAACATACCCCAA 58.995 34.615 0.00 0.00 0.00 4.12
283 374 7.506261 ACAATACACTGTTTAACATACCCCAAA 59.494 33.333 0.00 0.00 0.00 3.28
284 375 8.527810 CAATACACTGTTTAACATACCCCAAAT 58.472 33.333 0.00 0.00 0.00 2.32
285 376 6.987403 ACACTGTTTAACATACCCCAAATT 57.013 33.333 0.00 0.00 0.00 1.82
286 377 7.368198 ACACTGTTTAACATACCCCAAATTT 57.632 32.000 0.00 0.00 0.00 1.82
287 378 7.213678 ACACTGTTTAACATACCCCAAATTTG 58.786 34.615 11.40 11.40 0.00 2.32
288 379 7.147637 ACACTGTTTAACATACCCCAAATTTGT 60.148 33.333 16.73 1.39 0.00 2.83
289 380 7.383843 CACTGTTTAACATACCCCAAATTTGTC 59.616 37.037 16.73 0.00 0.00 3.18
290 381 7.289084 ACTGTTTAACATACCCCAAATTTGTCT 59.711 33.333 16.73 1.64 0.00 3.41
291 382 8.024145 TGTTTAACATACCCCAAATTTGTCTT 57.976 30.769 16.73 3.09 0.00 3.01
292 383 8.487028 TGTTTAACATACCCCAAATTTGTCTTT 58.513 29.630 16.73 1.41 0.00 2.52
293 384 9.332502 GTTTAACATACCCCAAATTTGTCTTTT 57.667 29.630 16.73 3.80 0.00 2.27
294 385 9.907229 TTTAACATACCCCAAATTTGTCTTTTT 57.093 25.926 16.73 4.24 0.00 1.94
314 405 6.974932 TTTTTGCTAAGAGCTACTCAGATG 57.025 37.500 0.00 0.00 42.97 2.90
315 406 5.667539 TTTGCTAAGAGCTACTCAGATGT 57.332 39.130 0.00 0.00 42.97 3.06
316 407 4.909696 TGCTAAGAGCTACTCAGATGTC 57.090 45.455 0.00 0.00 42.97 3.06
317 408 3.634448 TGCTAAGAGCTACTCAGATGTCC 59.366 47.826 0.00 0.00 42.97 4.02
318 409 3.634448 GCTAAGAGCTACTCAGATGTCCA 59.366 47.826 0.00 0.00 38.45 4.02
319 410 4.098654 GCTAAGAGCTACTCAGATGTCCAA 59.901 45.833 0.00 0.00 38.45 3.53
320 411 5.394663 GCTAAGAGCTACTCAGATGTCCAAA 60.395 44.000 0.00 0.00 38.45 3.28
321 412 5.690464 AAGAGCTACTCAGATGTCCAAAT 57.310 39.130 0.00 0.00 32.06 2.32
322 413 5.021033 AGAGCTACTCAGATGTCCAAATG 57.979 43.478 0.00 0.00 32.06 2.32
323 414 4.713814 AGAGCTACTCAGATGTCCAAATGA 59.286 41.667 0.00 0.00 32.06 2.57
324 415 5.366186 AGAGCTACTCAGATGTCCAAATGAT 59.634 40.000 0.00 0.00 32.06 2.45
325 416 5.999044 AGCTACTCAGATGTCCAAATGATT 58.001 37.500 0.00 0.00 0.00 2.57
326 417 6.421485 AGCTACTCAGATGTCCAAATGATTT 58.579 36.000 0.00 0.00 0.00 2.17
327 418 6.318144 AGCTACTCAGATGTCCAAATGATTTG 59.682 38.462 10.84 10.84 40.32 2.32
328 419 6.317140 GCTACTCAGATGTCCAAATGATTTGA 59.683 38.462 18.82 0.00 43.26 2.69
329 420 7.148188 GCTACTCAGATGTCCAAATGATTTGAA 60.148 37.037 18.82 0.00 43.26 2.69
330 421 7.528996 ACTCAGATGTCCAAATGATTTGAAA 57.471 32.000 18.82 4.37 43.26 2.69
331 422 8.130671 ACTCAGATGTCCAAATGATTTGAAAT 57.869 30.769 18.82 9.08 43.26 2.17
332 423 8.591072 ACTCAGATGTCCAAATGATTTGAAATT 58.409 29.630 18.82 1.83 43.26 1.82
333 424 9.431887 CTCAGATGTCCAAATGATTTGAAATTT 57.568 29.630 18.82 0.00 43.26 1.82
334 425 9.210329 TCAGATGTCCAAATGATTTGAAATTTG 57.790 29.630 18.82 13.07 43.26 2.32
341 432 7.418840 CAAATGATTTGAAATTTGGACCGAA 57.581 32.000 12.37 0.00 43.26 4.30
342 433 7.290118 CAAATGATTTGAAATTTGGACCGAAC 58.710 34.615 12.37 0.00 43.26 3.95
343 434 5.521906 TGATTTGAAATTTGGACCGAACA 57.478 34.783 0.00 0.00 0.00 3.18
344 435 6.095432 TGATTTGAAATTTGGACCGAACAT 57.905 33.333 0.00 0.00 0.00 2.71
345 436 6.155827 TGATTTGAAATTTGGACCGAACATC 58.844 36.000 0.00 0.00 0.00 3.06
346 437 5.521906 TTTGAAATTTGGACCGAACATCA 57.478 34.783 0.00 1.79 0.00 3.07
347 438 4.497473 TGAAATTTGGACCGAACATCAC 57.503 40.909 0.00 0.00 0.00 3.06
348 439 3.058570 TGAAATTTGGACCGAACATCACG 60.059 43.478 0.00 0.00 0.00 4.35
349 440 2.178912 ATTTGGACCGAACATCACGT 57.821 45.000 0.00 0.00 0.00 4.49
350 441 2.816204 TTTGGACCGAACATCACGTA 57.184 45.000 0.00 0.00 0.00 3.57
351 442 2.068837 TTGGACCGAACATCACGTAC 57.931 50.000 0.00 0.00 0.00 3.67
352 443 0.244450 TGGACCGAACATCACGTACC 59.756 55.000 0.00 0.00 0.00 3.34
353 444 0.244450 GGACCGAACATCACGTACCA 59.756 55.000 0.00 0.00 0.00 3.25
354 445 1.337074 GGACCGAACATCACGTACCAA 60.337 52.381 0.00 0.00 0.00 3.67
355 446 2.406130 GACCGAACATCACGTACCAAA 58.594 47.619 0.00 0.00 0.00 3.28
356 447 2.997986 GACCGAACATCACGTACCAAAT 59.002 45.455 0.00 0.00 0.00 2.32
357 448 3.404899 ACCGAACATCACGTACCAAATT 58.595 40.909 0.00 0.00 0.00 1.82
358 449 4.567971 ACCGAACATCACGTACCAAATTA 58.432 39.130 0.00 0.00 0.00 1.40
359 450 5.180271 ACCGAACATCACGTACCAAATTAT 58.820 37.500 0.00 0.00 0.00 1.28
360 451 5.292589 ACCGAACATCACGTACCAAATTATC 59.707 40.000 0.00 0.00 0.00 1.75
361 452 5.522460 CCGAACATCACGTACCAAATTATCT 59.478 40.000 0.00 0.00 0.00 1.98
362 453 6.698329 CCGAACATCACGTACCAAATTATCTA 59.302 38.462 0.00 0.00 0.00 1.98
363 454 7.306399 CCGAACATCACGTACCAAATTATCTAC 60.306 40.741 0.00 0.00 0.00 2.59
364 455 7.306399 CGAACATCACGTACCAAATTATCTACC 60.306 40.741 0.00 0.00 0.00 3.18
365 456 6.880484 ACATCACGTACCAAATTATCTACCA 58.120 36.000 0.00 0.00 0.00 3.25
366 457 7.506114 ACATCACGTACCAAATTATCTACCAT 58.494 34.615 0.00 0.00 0.00 3.55
367 458 7.441157 ACATCACGTACCAAATTATCTACCATG 59.559 37.037 0.00 0.00 0.00 3.66
368 459 5.756347 TCACGTACCAAATTATCTACCATGC 59.244 40.000 0.00 0.00 0.00 4.06
369 460 5.049680 CACGTACCAAATTATCTACCATGCC 60.050 44.000 0.00 0.00 0.00 4.40
370 461 5.060506 CGTACCAAATTATCTACCATGCCA 58.939 41.667 0.00 0.00 0.00 4.92
371 462 5.529430 CGTACCAAATTATCTACCATGCCAA 59.471 40.000 0.00 0.00 0.00 4.52
372 463 6.038825 CGTACCAAATTATCTACCATGCCAAA 59.961 38.462 0.00 0.00 0.00 3.28
373 464 6.865834 ACCAAATTATCTACCATGCCAAAA 57.134 33.333 0.00 0.00 0.00 2.44
374 465 7.251321 ACCAAATTATCTACCATGCCAAAAA 57.749 32.000 0.00 0.00 0.00 1.94
432 523 3.924918 TTTTTATTTAGCGCTGGTGCA 57.075 38.095 22.90 0.00 39.64 4.57
433 524 3.485947 TTTTATTTAGCGCTGGTGCAG 57.514 42.857 22.90 0.00 39.64 4.41
434 525 2.394930 TTATTTAGCGCTGGTGCAGA 57.605 45.000 22.90 0.00 39.64 4.26
435 526 2.620251 TATTTAGCGCTGGTGCAGAT 57.380 45.000 22.90 2.44 39.64 2.90
436 527 2.620251 ATTTAGCGCTGGTGCAGATA 57.380 45.000 22.90 0.00 39.64 1.98
437 528 1.651987 TTTAGCGCTGGTGCAGATAC 58.348 50.000 22.90 0.00 39.64 2.24
438 529 0.824109 TTAGCGCTGGTGCAGATACT 59.176 50.000 22.90 0.00 39.64 2.12
439 530 0.385751 TAGCGCTGGTGCAGATACTC 59.614 55.000 22.90 0.00 39.64 2.59
440 531 1.884926 GCGCTGGTGCAGATACTCC 60.885 63.158 0.00 0.00 39.64 3.85
441 532 1.819229 CGCTGGTGCAGATACTCCT 59.181 57.895 0.00 0.00 39.64 3.69
442 533 0.176680 CGCTGGTGCAGATACTCCTT 59.823 55.000 0.00 0.00 39.64 3.36
443 534 1.661341 GCTGGTGCAGATACTCCTTG 58.339 55.000 0.00 0.00 39.41 3.61
444 535 1.208052 GCTGGTGCAGATACTCCTTGA 59.792 52.381 0.00 0.00 39.41 3.02
445 536 2.355108 GCTGGTGCAGATACTCCTTGAA 60.355 50.000 0.00 0.00 39.41 2.69
446 537 3.529533 CTGGTGCAGATACTCCTTGAAG 58.470 50.000 0.00 0.00 32.44 3.02
447 538 2.284190 GGTGCAGATACTCCTTGAAGC 58.716 52.381 0.00 0.00 0.00 3.86
448 539 2.284190 GTGCAGATACTCCTTGAAGCC 58.716 52.381 0.00 0.00 0.00 4.35
449 540 1.908619 TGCAGATACTCCTTGAAGCCA 59.091 47.619 0.00 0.00 0.00 4.75
450 541 2.305635 TGCAGATACTCCTTGAAGCCAA 59.694 45.455 0.00 0.00 0.00 4.52
451 542 3.244875 TGCAGATACTCCTTGAAGCCAAA 60.245 43.478 0.00 0.00 0.00 3.28
452 543 3.758554 GCAGATACTCCTTGAAGCCAAAA 59.241 43.478 0.00 0.00 0.00 2.44
453 544 4.379918 GCAGATACTCCTTGAAGCCAAAAC 60.380 45.833 0.00 0.00 0.00 2.43
454 545 4.003648 AGATACTCCTTGAAGCCAAAACG 58.996 43.478 0.00 0.00 0.00 3.60
455 546 0.668535 ACTCCTTGAAGCCAAAACGC 59.331 50.000 0.00 0.00 0.00 4.84
456 547 0.039165 CTCCTTGAAGCCAAAACGCC 60.039 55.000 0.00 0.00 0.00 5.68
457 548 0.467290 TCCTTGAAGCCAAAACGCCT 60.467 50.000 0.00 0.00 0.00 5.52
458 549 0.039165 CCTTGAAGCCAAAACGCCTC 60.039 55.000 0.00 0.00 0.00 4.70
459 550 0.667993 CTTGAAGCCAAAACGCCTCA 59.332 50.000 0.00 0.00 0.00 3.86
460 551 0.383949 TTGAAGCCAAAACGCCTCAC 59.616 50.000 0.00 0.00 29.01 3.51
461 552 0.465460 TGAAGCCAAAACGCCTCACT 60.465 50.000 0.00 0.00 0.00 3.41
462 553 0.238553 GAAGCCAAAACGCCTCACTC 59.761 55.000 0.00 0.00 0.00 3.51
463 554 0.465460 AAGCCAAAACGCCTCACTCA 60.465 50.000 0.00 0.00 0.00 3.41
464 555 0.886490 AGCCAAAACGCCTCACTCAG 60.886 55.000 0.00 0.00 0.00 3.35
465 556 0.884704 GCCAAAACGCCTCACTCAGA 60.885 55.000 0.00 0.00 0.00 3.27
466 557 1.593196 CCAAAACGCCTCACTCAGAA 58.407 50.000 0.00 0.00 0.00 3.02
467 558 1.946768 CCAAAACGCCTCACTCAGAAA 59.053 47.619 0.00 0.00 0.00 2.52
468 559 2.357637 CCAAAACGCCTCACTCAGAAAA 59.642 45.455 0.00 0.00 0.00 2.29
469 560 3.181491 CCAAAACGCCTCACTCAGAAAAA 60.181 43.478 0.00 0.00 0.00 1.94
470 561 4.499696 CCAAAACGCCTCACTCAGAAAAAT 60.500 41.667 0.00 0.00 0.00 1.82
471 562 3.904136 AACGCCTCACTCAGAAAAATG 57.096 42.857 0.00 0.00 0.00 2.32
472 563 2.851195 ACGCCTCACTCAGAAAAATGT 58.149 42.857 0.00 0.00 0.00 2.71
473 564 2.808543 ACGCCTCACTCAGAAAAATGTC 59.191 45.455 0.00 0.00 0.00 3.06
474 565 2.160417 CGCCTCACTCAGAAAAATGTCC 59.840 50.000 0.00 0.00 0.00 4.02
482 573 7.155328 TCACTCAGAAAAATGTCCTTACTCTC 58.845 38.462 0.00 0.00 0.00 3.20
486 577 4.530946 AGAAAAATGTCCTTACTCTCCCGA 59.469 41.667 0.00 0.00 0.00 5.14
493 584 3.194968 GTCCTTACTCTCCCGACATCAAA 59.805 47.826 0.00 0.00 0.00 2.69
504 595 5.309638 TCCCGACATCAAATTACTCAAACA 58.690 37.500 0.00 0.00 0.00 2.83
509 600 7.351981 CGACATCAAATTACTCAAACACTTCA 58.648 34.615 0.00 0.00 0.00 3.02
512 603 6.385649 TCAAATTACTCAAACACTTCACCC 57.614 37.500 0.00 0.00 0.00 4.61
513 604 5.300792 TCAAATTACTCAAACACTTCACCCC 59.699 40.000 0.00 0.00 0.00 4.95
514 605 3.935818 TTACTCAAACACTTCACCCCA 57.064 42.857 0.00 0.00 0.00 4.96
529 1005 1.188863 CCCCAGCCAAAGATTGAAGG 58.811 55.000 0.00 0.00 0.00 3.46
538 1014 4.794003 GCCAAAGATTGAAGGAACACACAG 60.794 45.833 0.00 0.00 0.00 3.66
570 1046 9.352784 CATCTTAGATAACTCGGAATGAAGATC 57.647 37.037 0.00 0.00 30.66 2.75
648 1124 1.765314 CTCGACCTGGAAATGGAGGAT 59.235 52.381 0.00 0.00 33.16 3.24
669 1150 4.704833 GAAGTCAGCAGCGCCCCA 62.705 66.667 2.29 0.00 0.00 4.96
727 1216 1.152984 TGCCACCATGCCGGATAAG 60.153 57.895 5.05 0.00 38.63 1.73
770 1262 4.477975 CCCCTCGCACGACTCGAC 62.478 72.222 5.20 0.00 32.08 4.20
830 1326 3.615709 GCCACAAAGCCACCACCC 61.616 66.667 0.00 0.00 0.00 4.61
831 1327 3.294493 CCACAAAGCCACCACCCG 61.294 66.667 0.00 0.00 0.00 5.28
832 1328 3.977244 CACAAAGCCACCACCCGC 61.977 66.667 0.00 0.00 0.00 6.13
833 1329 4.204028 ACAAAGCCACCACCCGCT 62.204 61.111 0.00 0.00 36.74 5.52
852 1387 4.003788 CGTGCGTTCCCCTCACCT 62.004 66.667 0.00 0.00 0.00 4.00
888 1423 4.143333 CCCGCCGTCCAGTTCGAT 62.143 66.667 0.00 0.00 0.00 3.59
890 1425 1.140161 CCGCCGTCCAGTTCGATAA 59.860 57.895 0.00 0.00 0.00 1.75
891 1426 0.249322 CCGCCGTCCAGTTCGATAAT 60.249 55.000 0.00 0.00 0.00 1.28
892 1427 0.852777 CGCCGTCCAGTTCGATAATG 59.147 55.000 0.00 0.00 0.00 1.90
893 1428 0.582005 GCCGTCCAGTTCGATAATGC 59.418 55.000 0.00 0.00 0.00 3.56
894 1429 1.806623 GCCGTCCAGTTCGATAATGCT 60.807 52.381 0.00 0.00 0.00 3.79
895 1430 2.545113 GCCGTCCAGTTCGATAATGCTA 60.545 50.000 0.00 0.00 0.00 3.49
896 1431 3.050619 CCGTCCAGTTCGATAATGCTAC 58.949 50.000 0.00 0.00 0.00 3.58
897 1432 3.490249 CCGTCCAGTTCGATAATGCTACA 60.490 47.826 0.00 0.00 0.00 2.74
898 1433 3.486108 CGTCCAGTTCGATAATGCTACAC 59.514 47.826 0.00 0.00 0.00 2.90
899 1434 4.683832 GTCCAGTTCGATAATGCTACACT 58.316 43.478 0.00 0.00 0.00 3.55
900 1435 5.109903 GTCCAGTTCGATAATGCTACACTT 58.890 41.667 0.00 0.00 0.00 3.16
901 1436 6.270815 GTCCAGTTCGATAATGCTACACTTA 58.729 40.000 0.00 0.00 0.00 2.24
902 1437 6.198591 GTCCAGTTCGATAATGCTACACTTAC 59.801 42.308 0.00 0.00 0.00 2.34
903 1438 6.096423 TCCAGTTCGATAATGCTACACTTACT 59.904 38.462 0.00 0.00 0.00 2.24
904 1439 6.199154 CCAGTTCGATAATGCTACACTTACTG 59.801 42.308 0.00 0.00 0.00 2.74
905 1440 6.199154 CAGTTCGATAATGCTACACTTACTGG 59.801 42.308 0.00 0.00 0.00 4.00
906 1441 6.096423 AGTTCGATAATGCTACACTTACTGGA 59.904 38.462 0.00 0.00 0.00 3.86
907 1442 6.459670 TCGATAATGCTACACTTACTGGAA 57.540 37.500 0.00 0.00 0.00 3.53
908 1443 6.869695 TCGATAATGCTACACTTACTGGAAA 58.130 36.000 0.00 0.00 0.00 3.13
909 1444 7.497595 TCGATAATGCTACACTTACTGGAAAT 58.502 34.615 0.00 0.00 0.00 2.17
910 1445 7.985184 TCGATAATGCTACACTTACTGGAAATT 59.015 33.333 0.00 0.00 0.00 1.82
911 1446 8.612619 CGATAATGCTACACTTACTGGAAATTT 58.387 33.333 0.00 0.00 0.00 1.82
915 1450 7.575414 TGCTACACTTACTGGAAATTTTTCA 57.425 32.000 5.48 0.00 38.92 2.69
916 1451 7.422399 TGCTACACTTACTGGAAATTTTTCAC 58.578 34.615 5.48 0.00 38.92 3.18
917 1452 6.577427 GCTACACTTACTGGAAATTTTTCACG 59.423 38.462 5.48 0.00 38.92 4.35
918 1453 5.827666 ACACTTACTGGAAATTTTTCACGG 58.172 37.500 5.48 3.08 38.92 4.94
919 1454 5.591067 ACACTTACTGGAAATTTTTCACGGA 59.409 36.000 5.48 0.00 38.92 4.69
920 1455 5.912955 CACTTACTGGAAATTTTTCACGGAC 59.087 40.000 5.48 0.00 38.92 4.79
921 1456 3.619233 ACTGGAAATTTTTCACGGACG 57.381 42.857 5.48 0.00 38.92 4.79
922 1457 2.292292 ACTGGAAATTTTTCACGGACGG 59.708 45.455 5.48 0.00 38.92 4.79
923 1458 2.292292 CTGGAAATTTTTCACGGACGGT 59.708 45.455 5.48 0.00 38.92 4.83
924 1459 3.474600 TGGAAATTTTTCACGGACGGTA 58.525 40.909 5.48 0.00 38.92 4.02
925 1460 3.499157 TGGAAATTTTTCACGGACGGTAG 59.501 43.478 5.48 0.00 38.92 3.18
926 1461 3.485633 GAAATTTTTCACGGACGGTAGC 58.514 45.455 0.00 0.00 37.15 3.58
927 1462 2.467566 ATTTTTCACGGACGGTAGCT 57.532 45.000 0.00 0.00 0.00 3.32
928 1463 2.243602 TTTTTCACGGACGGTAGCTT 57.756 45.000 0.00 0.00 0.00 3.74
929 1464 3.383620 TTTTTCACGGACGGTAGCTTA 57.616 42.857 0.00 0.00 0.00 3.09
930 1465 2.352503 TTTCACGGACGGTAGCTTAC 57.647 50.000 0.00 0.00 0.00 2.34
931 1466 1.246649 TTCACGGACGGTAGCTTACA 58.753 50.000 0.00 0.00 0.00 2.41
932 1467 0.806868 TCACGGACGGTAGCTTACAG 59.193 55.000 0.00 0.00 0.00 2.74
933 1468 0.806868 CACGGACGGTAGCTTACAGA 59.193 55.000 0.00 0.00 0.00 3.41
934 1469 1.404391 CACGGACGGTAGCTTACAGAT 59.596 52.381 0.00 0.00 0.00 2.90
935 1470 1.404391 ACGGACGGTAGCTTACAGATG 59.596 52.381 0.00 0.00 0.00 2.90
936 1471 1.269102 CGGACGGTAGCTTACAGATGG 60.269 57.143 0.00 0.00 0.00 3.51
937 1472 2.029623 GGACGGTAGCTTACAGATGGA 58.970 52.381 0.00 0.00 0.00 3.41
938 1473 2.034812 GGACGGTAGCTTACAGATGGAG 59.965 54.545 0.00 0.00 0.00 3.86
939 1474 2.032620 ACGGTAGCTTACAGATGGAGG 58.967 52.381 0.00 0.00 0.00 4.30
940 1475 2.032620 CGGTAGCTTACAGATGGAGGT 58.967 52.381 0.00 0.00 0.00 3.85
941 1476 2.223829 CGGTAGCTTACAGATGGAGGTG 60.224 54.545 0.00 0.00 0.00 4.00
942 1477 2.103263 GGTAGCTTACAGATGGAGGTGG 59.897 54.545 0.00 0.00 0.00 4.61
943 1478 0.543749 AGCTTACAGATGGAGGTGGC 59.456 55.000 0.00 0.00 0.00 5.01
944 1479 0.253044 GCTTACAGATGGAGGTGGCA 59.747 55.000 0.00 0.00 0.00 4.92
945 1480 1.745141 GCTTACAGATGGAGGTGGCAG 60.745 57.143 0.00 0.00 0.00 4.85
946 1481 0.253044 TTACAGATGGAGGTGGCAGC 59.747 55.000 9.02 9.02 0.00 5.25
947 1482 0.909133 TACAGATGGAGGTGGCAGCA 60.909 55.000 20.04 0.00 0.00 4.41
948 1483 1.226542 CAGATGGAGGTGGCAGCAT 59.773 57.895 20.04 3.34 0.00 3.79
949 1484 0.395311 CAGATGGAGGTGGCAGCATT 60.395 55.000 20.04 0.00 0.00 3.56
950 1485 1.134007 CAGATGGAGGTGGCAGCATTA 60.134 52.381 20.04 4.35 0.00 1.90
951 1486 1.565759 AGATGGAGGTGGCAGCATTAA 59.434 47.619 20.04 1.58 0.00 1.40
952 1487 2.025037 AGATGGAGGTGGCAGCATTAAA 60.025 45.455 20.04 0.00 0.00 1.52
953 1488 2.530460 TGGAGGTGGCAGCATTAAAT 57.470 45.000 20.04 0.00 0.00 1.40
970 1505 6.389906 CATTAAATTCTTCACCAACCCACTC 58.610 40.000 0.00 0.00 0.00 3.51
971 1506 3.884037 AATTCTTCACCAACCCACTCT 57.116 42.857 0.00 0.00 0.00 3.24
974 1509 2.338809 TCTTCACCAACCCACTCTCAT 58.661 47.619 0.00 0.00 0.00 2.90
976 1511 3.907474 TCTTCACCAACCCACTCTCATAA 59.093 43.478 0.00 0.00 0.00 1.90
977 1512 3.981071 TCACCAACCCACTCTCATAAG 57.019 47.619 0.00 0.00 0.00 1.73
1087 1653 3.181467 GCTCCTCTTCAGCACATACATCT 60.181 47.826 0.00 0.00 36.82 2.90
1088 1654 4.370049 CTCCTCTTCAGCACATACATCTG 58.630 47.826 0.00 0.00 0.00 2.90
1089 1655 2.871022 CCTCTTCAGCACATACATCTGC 59.129 50.000 0.00 0.00 0.00 4.26
1090 1656 2.871022 CTCTTCAGCACATACATCTGCC 59.129 50.000 0.00 0.00 33.57 4.85
1091 1657 1.596260 CTTCAGCACATACATCTGCCG 59.404 52.381 0.00 0.00 33.57 5.69
1092 1658 0.179076 TCAGCACATACATCTGCCGG 60.179 55.000 0.00 0.00 33.57 6.13
1093 1659 1.524621 AGCACATACATCTGCCGGC 60.525 57.895 22.73 22.73 33.57 6.13
1094 1660 2.885676 GCACATACATCTGCCGGCG 61.886 63.158 23.90 16.91 0.00 6.46
1095 1661 1.521457 CACATACATCTGCCGGCGT 60.521 57.895 23.90 16.09 0.00 5.68
1096 1662 1.227263 ACATACATCTGCCGGCGTC 60.227 57.895 23.90 0.00 0.00 5.19
1097 1663 1.068083 CATACATCTGCCGGCGTCT 59.932 57.895 23.90 5.11 0.00 4.18
1099 1665 0.598562 ATACATCTGCCGGCGTCTAG 59.401 55.000 23.90 14.00 0.00 2.43
1113 1679 4.030134 GCGTCTAGCTAGCTTACTTTCA 57.970 45.455 24.88 1.10 44.04 2.69
1114 1680 4.039032 GCGTCTAGCTAGCTTACTTTCAG 58.961 47.826 24.88 12.35 44.04 3.02
1117 1683 5.740099 CGTCTAGCTAGCTTACTTTCAGAAC 59.260 44.000 24.88 10.73 0.00 3.01
1119 1686 4.891992 AGCTAGCTTACTTTCAGAACCA 57.108 40.909 12.68 0.00 0.00 3.67
1167 1747 7.484975 GTCTAGCTAGCTTACTTTCAGAATCA 58.515 38.462 24.88 0.00 0.00 2.57
1391 2028 1.630126 TAGAGGAGTACCGACGGCCT 61.630 60.000 15.39 12.44 41.83 5.19
1393 2030 4.509737 GGAGTACCGACGGCCTGC 62.510 72.222 15.39 11.83 0.00 4.85
1583 2220 3.376935 CTTCGGCGCCACCTCTCAT 62.377 63.158 28.98 0.00 35.61 2.90
1927 2601 1.577328 CCAACGTGACACCATGCCTC 61.577 60.000 0.00 0.00 32.58 4.70
1981 2655 2.035449 CCTCGTCCCGCTTTCATACATA 59.965 50.000 0.00 0.00 0.00 2.29
2467 3141 0.391130 GTGCTGCCACCAAGTCGATA 60.391 55.000 0.00 0.00 35.92 2.92
2641 3315 3.244700 CCCAGTTCTCAGAGTTGGTGAAT 60.245 47.826 13.69 0.00 0.00 2.57
2659 3333 3.496884 TGAATGACTTCTACAACAACGGC 59.503 43.478 0.00 0.00 32.29 5.68
2854 3528 1.292223 CTCAAGGAAGACCGCCGAA 59.708 57.895 0.00 0.00 41.83 4.30
3193 3867 2.797515 CGTGGAGACGTCAGTGTTC 58.202 57.895 19.50 5.73 40.91 3.18
3196 3870 2.081212 GGAGACGTCAGTGTTCGCG 61.081 63.158 19.50 0.00 0.00 5.87
3303 3977 2.287069 CCGCACAACAAAACCGTATTGA 60.287 45.455 0.00 0.00 0.00 2.57
3677 4380 5.123936 GGGTAGCCAGTAGAACTTTTATGG 58.876 45.833 5.96 0.00 0.00 2.74
3763 4470 1.450312 GATCAACCAGCCCTCGTGG 60.450 63.158 0.00 0.00 41.30 4.94
3773 4480 1.227263 CCCTCGTGGCAATAGTCCG 60.227 63.158 0.00 0.00 0.00 4.79
3885 4592 3.388024 TCTCTGAATTCTATGAACGGGGG 59.612 47.826 7.05 0.00 0.00 5.40
3917 4624 6.070951 TCTCTGAATTCACAATCTCCCATT 57.929 37.500 3.38 0.00 0.00 3.16
3934 4641 6.323739 TCTCCCATTTAGTTTTTGCAGTTTCT 59.676 34.615 0.00 0.00 0.00 2.52
3958 4666 8.585881 TCTGTATTCTGCTTACTAGTTTCAGTT 58.414 33.333 0.00 2.40 0.00 3.16
4011 4725 4.527816 TGGTGTTATTCAACTACCGTACCT 59.472 41.667 0.00 0.00 38.04 3.08
4103 4848 2.874701 TGAAGTTTCTCTGTGCTTCTGC 59.125 45.455 0.00 0.00 38.41 4.26
4270 7014 4.893524 ACATTGACCATATAGGAGACGTGA 59.106 41.667 0.00 0.00 41.22 4.35
4320 7064 1.019278 CCTGCCAACTAACGCGTCAT 61.019 55.000 14.44 0.00 0.00 3.06
4380 7179 7.229707 TCCTAATCTCGAATTCAGTAGGAGAAG 59.770 40.741 13.54 8.35 37.31 2.85
4387 7186 5.814705 CGAATTCAGTAGGAGAAGCAGAAAT 59.185 40.000 6.22 0.00 0.00 2.17
4482 8915 5.616488 TTCCTTATAAGTCGGTGTTTTGC 57.384 39.130 11.50 0.00 0.00 3.68
4513 8946 2.426738 ACAAAGCTGCTAGTTTGTTGCA 59.573 40.909 11.37 0.00 42.85 4.08
4569 9003 6.440965 AGGTAGCCAGTAGAACTTCTAACATT 59.559 38.462 0.00 0.00 29.58 2.71
4570 9004 7.038231 AGGTAGCCAGTAGAACTTCTAACATTT 60.038 37.037 0.00 0.00 29.58 2.32
4650 9090 3.620488 TCTAAATCAATGGTCTGGTGGC 58.380 45.455 0.00 0.00 0.00 5.01
4776 9216 6.565234 ACATAGACCACGATCAGAAAGTTAG 58.435 40.000 0.00 0.00 0.00 2.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 4.217118 GGGCTCAAGATTGAATATTCGCAT 59.783 41.667 10.80 5.43 36.64 4.73
57 58 3.364366 CGGGCTCAAGATTGAATATTCGC 60.364 47.826 10.80 5.26 36.64 4.70
58 59 3.187227 CCGGGCTCAAGATTGAATATTCG 59.813 47.826 10.80 0.00 36.64 3.34
59 60 3.503748 CCCGGGCTCAAGATTGAATATTC 59.496 47.826 8.08 8.60 36.64 1.75
61 62 2.815589 GCCCGGGCTCAAGATTGAATAT 60.816 50.000 38.76 0.00 36.64 1.28
62 63 1.476833 GCCCGGGCTCAAGATTGAATA 60.477 52.381 38.76 0.00 36.64 1.75
63 64 0.753111 GCCCGGGCTCAAGATTGAAT 60.753 55.000 38.76 0.00 36.64 2.57
64 65 1.378514 GCCCGGGCTCAAGATTGAA 60.379 57.895 38.76 0.00 36.64 2.69
65 66 2.272146 GCCCGGGCTCAAGATTGA 59.728 61.111 38.76 0.00 38.26 2.57
76 77 4.864334 GGTGCAGATGAGCCCGGG 62.864 72.222 19.09 19.09 0.00 5.73
77 78 3.790437 AGGTGCAGATGAGCCCGG 61.790 66.667 0.00 0.00 32.32 5.73
78 79 2.513204 CAGGTGCAGATGAGCCCG 60.513 66.667 0.00 0.00 32.32 6.13
79 80 2.124403 CCAGGTGCAGATGAGCCC 60.124 66.667 0.00 0.00 0.00 5.19
80 81 2.124403 CCCAGGTGCAGATGAGCC 60.124 66.667 0.00 0.00 0.00 4.70
81 82 2.827642 GCCCAGGTGCAGATGAGC 60.828 66.667 0.00 0.00 0.00 4.26
82 83 1.001764 TTGCCCAGGTGCAGATGAG 60.002 57.895 3.19 0.00 43.21 2.90
83 84 1.001764 CTTGCCCAGGTGCAGATGA 60.002 57.895 3.19 0.00 43.21 2.92
85 86 0.112995 TTTCTTGCCCAGGTGCAGAT 59.887 50.000 3.19 0.00 43.21 2.90
86 87 0.112995 ATTTCTTGCCCAGGTGCAGA 59.887 50.000 3.19 1.88 43.21 4.26
87 88 1.838112 TATTTCTTGCCCAGGTGCAG 58.162 50.000 3.19 0.00 43.21 4.41
88 89 2.300956 TTATTTCTTGCCCAGGTGCA 57.699 45.000 0.00 0.00 40.07 4.57
89 90 3.195396 TGAATTATTTCTTGCCCAGGTGC 59.805 43.478 0.00 0.00 32.78 5.01
90 91 4.675146 CGTGAATTATTTCTTGCCCAGGTG 60.675 45.833 0.00 0.00 32.78 4.00
92 93 3.694072 TCGTGAATTATTTCTTGCCCAGG 59.306 43.478 0.00 0.00 32.78 4.45
93 94 4.963276 TCGTGAATTATTTCTTGCCCAG 57.037 40.909 0.00 0.00 32.78 4.45
95 96 7.595311 ATTTTTCGTGAATTATTTCTTGCCC 57.405 32.000 0.00 0.00 32.78 5.36
137 228 4.716794 ACCATGCACAAACAATTTGGATT 58.283 34.783 4.27 0.00 44.81 3.01
139 230 3.834489 ACCATGCACAAACAATTTGGA 57.166 38.095 4.27 0.00 44.81 3.53
140 231 4.880759 TCTACCATGCACAAACAATTTGG 58.119 39.130 6.28 0.00 44.81 3.28
141 232 8.706492 ATTATCTACCATGCACAAACAATTTG 57.294 30.769 0.00 0.00 45.95 2.32
143 234 9.153721 CAAATTATCTACCATGCACAAACAATT 57.846 29.630 0.00 0.00 0.00 2.32
148 239 6.210385 ACACCAAATTATCTACCATGCACAAA 59.790 34.615 0.00 0.00 0.00 2.83
149 240 5.714333 ACACCAAATTATCTACCATGCACAA 59.286 36.000 0.00 0.00 0.00 3.33
150 241 5.125257 CACACCAAATTATCTACCATGCACA 59.875 40.000 0.00 0.00 0.00 4.57
151 242 5.125417 ACACACCAAATTATCTACCATGCAC 59.875 40.000 0.00 0.00 0.00 4.57
152 243 5.125257 CACACACCAAATTATCTACCATGCA 59.875 40.000 0.00 0.00 0.00 3.96
153 244 5.356751 TCACACACCAAATTATCTACCATGC 59.643 40.000 0.00 0.00 0.00 4.06
154 245 6.823182 TCTCACACACCAAATTATCTACCATG 59.177 38.462 0.00 0.00 0.00 3.66
155 246 6.957631 TCTCACACACCAAATTATCTACCAT 58.042 36.000 0.00 0.00 0.00 3.55
156 247 6.367374 TCTCACACACCAAATTATCTACCA 57.633 37.500 0.00 0.00 0.00 3.25
157 248 6.238484 GCATCTCACACACCAAATTATCTACC 60.238 42.308 0.00 0.00 0.00 3.18
158 249 6.510157 CGCATCTCACACACCAAATTATCTAC 60.510 42.308 0.00 0.00 0.00 2.59
159 250 5.523552 CGCATCTCACACACCAAATTATCTA 59.476 40.000 0.00 0.00 0.00 1.98
160 251 4.333649 CGCATCTCACACACCAAATTATCT 59.666 41.667 0.00 0.00 0.00 1.98
161 252 4.591202 CGCATCTCACACACCAAATTATC 58.409 43.478 0.00 0.00 0.00 1.75
162 253 3.181497 GCGCATCTCACACACCAAATTAT 60.181 43.478 0.30 0.00 0.00 1.28
163 254 2.161410 GCGCATCTCACACACCAAATTA 59.839 45.455 0.30 0.00 0.00 1.40
164 255 1.068333 GCGCATCTCACACACCAAATT 60.068 47.619 0.30 0.00 0.00 1.82
165 256 0.523072 GCGCATCTCACACACCAAAT 59.477 50.000 0.30 0.00 0.00 2.32
166 257 0.534877 AGCGCATCTCACACACCAAA 60.535 50.000 11.47 0.00 0.00 3.28
167 258 0.950555 GAGCGCATCTCACACACCAA 60.951 55.000 11.47 0.00 41.51 3.67
168 259 1.374631 GAGCGCATCTCACACACCA 60.375 57.895 11.47 0.00 41.51 4.17
169 260 2.103042 GGAGCGCATCTCACACACC 61.103 63.158 11.47 0.00 43.70 4.16
170 261 0.950555 TTGGAGCGCATCTCACACAC 60.951 55.000 11.47 0.00 43.70 3.82
171 262 0.250252 TTTGGAGCGCATCTCACACA 60.250 50.000 11.47 0.00 43.70 3.72
172 263 1.089920 ATTTGGAGCGCATCTCACAC 58.910 50.000 11.47 0.00 43.70 3.82
173 264 1.825090 AATTTGGAGCGCATCTCACA 58.175 45.000 11.47 0.00 43.70 3.58
174 265 2.421424 AGAAATTTGGAGCGCATCTCAC 59.579 45.455 11.47 0.00 43.70 3.51
175 266 2.421073 CAGAAATTTGGAGCGCATCTCA 59.579 45.455 11.47 0.00 43.70 3.27
176 267 2.679837 TCAGAAATTTGGAGCGCATCTC 59.320 45.455 11.47 0.00 41.15 2.75
177 268 2.681848 CTCAGAAATTTGGAGCGCATCT 59.318 45.455 11.47 0.00 0.00 2.90
178 269 2.793933 GCTCAGAAATTTGGAGCGCATC 60.794 50.000 19.77 4.01 43.83 3.91
179 270 1.133790 GCTCAGAAATTTGGAGCGCAT 59.866 47.619 19.77 0.00 43.83 4.73
180 271 0.523072 GCTCAGAAATTTGGAGCGCA 59.477 50.000 19.77 0.00 43.83 6.09
181 272 3.319245 GCTCAGAAATTTGGAGCGC 57.681 52.632 19.77 0.00 43.83 5.92
187 278 7.171848 TCAAATGTCCAAATGCTCAGAAATTTG 59.828 33.333 0.00 7.78 41.90 2.32
188 279 7.218614 TCAAATGTCCAAATGCTCAGAAATTT 58.781 30.769 0.00 0.00 28.34 1.82
189 280 6.761312 TCAAATGTCCAAATGCTCAGAAATT 58.239 32.000 0.00 0.00 0.00 1.82
190 281 6.014840 ACTCAAATGTCCAAATGCTCAGAAAT 60.015 34.615 0.00 0.00 0.00 2.17
191 282 5.302568 ACTCAAATGTCCAAATGCTCAGAAA 59.697 36.000 0.00 0.00 0.00 2.52
192 283 4.828939 ACTCAAATGTCCAAATGCTCAGAA 59.171 37.500 0.00 0.00 0.00 3.02
193 284 4.401022 ACTCAAATGTCCAAATGCTCAGA 58.599 39.130 0.00 0.00 0.00 3.27
194 285 4.778534 ACTCAAATGTCCAAATGCTCAG 57.221 40.909 0.00 0.00 0.00 3.35
195 286 4.156556 GCTACTCAAATGTCCAAATGCTCA 59.843 41.667 0.00 0.00 0.00 4.26
196 287 4.397417 AGCTACTCAAATGTCCAAATGCTC 59.603 41.667 0.00 0.00 0.00 4.26
197 288 4.338879 AGCTACTCAAATGTCCAAATGCT 58.661 39.130 0.00 0.00 0.00 3.79
198 289 4.397417 AGAGCTACTCAAATGTCCAAATGC 59.603 41.667 0.00 0.00 32.06 3.56
199 290 6.116680 GAGAGCTACTCAAATGTCCAAATG 57.883 41.667 7.93 0.00 44.36 2.32
232 323 9.003658 GTTCATATACTATTCTGACCCAATTGG 57.996 37.037 18.21 18.21 41.37 3.16
233 324 9.559732 TGTTCATATACTATTCTGACCCAATTG 57.440 33.333 0.00 0.00 0.00 2.32
253 344 8.736244 GGGTATGTTAAACAGTGTATTGTTCAT 58.264 33.333 0.00 0.55 40.24 2.57
254 345 7.175293 GGGGTATGTTAAACAGTGTATTGTTCA 59.825 37.037 0.00 0.00 40.24 3.18
255 346 7.175293 TGGGGTATGTTAAACAGTGTATTGTTC 59.825 37.037 0.00 0.00 40.24 3.18
256 347 7.005296 TGGGGTATGTTAAACAGTGTATTGTT 58.995 34.615 0.00 0.00 42.82 2.83
257 348 6.544650 TGGGGTATGTTAAACAGTGTATTGT 58.455 36.000 0.00 0.00 0.00 2.71
258 349 7.455641 TTGGGGTATGTTAAACAGTGTATTG 57.544 36.000 0.00 0.00 0.00 1.90
259 350 8.658840 ATTTGGGGTATGTTAAACAGTGTATT 57.341 30.769 0.00 0.00 0.00 1.89
260 351 8.658840 AATTTGGGGTATGTTAAACAGTGTAT 57.341 30.769 0.00 0.00 0.00 2.29
261 352 8.361139 CAAATTTGGGGTATGTTAAACAGTGTA 58.639 33.333 10.49 0.00 0.00 2.90
262 353 6.987403 AATTTGGGGTATGTTAAACAGTGT 57.013 33.333 0.00 0.00 0.00 3.55
263 354 7.213678 ACAAATTTGGGGTATGTTAAACAGTG 58.786 34.615 21.74 0.00 0.00 3.66
264 355 7.289084 AGACAAATTTGGGGTATGTTAAACAGT 59.711 33.333 21.74 0.00 0.00 3.55
265 356 7.666623 AGACAAATTTGGGGTATGTTAAACAG 58.333 34.615 21.74 0.00 0.00 3.16
266 357 7.604657 AGACAAATTTGGGGTATGTTAAACA 57.395 32.000 21.74 0.00 0.00 2.83
267 358 8.896320 AAAGACAAATTTGGGGTATGTTAAAC 57.104 30.769 21.74 0.00 0.00 2.01
268 359 9.907229 AAAAAGACAAATTTGGGGTATGTTAAA 57.093 25.926 21.74 0.00 0.00 1.52
291 382 6.467677 ACATCTGAGTAGCTCTTAGCAAAAA 58.532 36.000 0.00 0.00 45.56 1.94
292 383 6.042638 ACATCTGAGTAGCTCTTAGCAAAA 57.957 37.500 0.00 0.00 45.56 2.44
293 384 5.394663 GGACATCTGAGTAGCTCTTAGCAAA 60.395 44.000 0.00 0.00 45.56 3.68
294 385 4.098654 GGACATCTGAGTAGCTCTTAGCAA 59.901 45.833 0.00 0.00 45.56 3.91
295 386 3.634448 GGACATCTGAGTAGCTCTTAGCA 59.366 47.826 0.00 0.00 45.56 3.49
296 387 3.634448 TGGACATCTGAGTAGCTCTTAGC 59.366 47.826 0.00 0.00 42.84 3.09
297 388 5.843673 TTGGACATCTGAGTAGCTCTTAG 57.156 43.478 0.00 0.00 0.00 2.18
298 389 6.381133 TCATTTGGACATCTGAGTAGCTCTTA 59.619 38.462 0.00 0.00 0.00 2.10
299 390 5.188555 TCATTTGGACATCTGAGTAGCTCTT 59.811 40.000 0.00 0.00 0.00 2.85
300 391 4.713814 TCATTTGGACATCTGAGTAGCTCT 59.286 41.667 0.00 0.00 0.00 4.09
301 392 5.016051 TCATTTGGACATCTGAGTAGCTC 57.984 43.478 0.00 0.00 0.00 4.09
302 393 5.627182 ATCATTTGGACATCTGAGTAGCT 57.373 39.130 0.00 0.00 0.00 3.32
303 394 6.317140 TCAAATCATTTGGACATCTGAGTAGC 59.683 38.462 10.30 0.00 40.98 3.58
304 395 7.854557 TCAAATCATTTGGACATCTGAGTAG 57.145 36.000 10.30 0.00 40.98 2.57
305 396 8.634335 TTTCAAATCATTTGGACATCTGAGTA 57.366 30.769 10.30 0.00 40.98 2.59
306 397 7.528996 TTTCAAATCATTTGGACATCTGAGT 57.471 32.000 10.30 0.00 40.98 3.41
307 398 8.997621 AATTTCAAATCATTTGGACATCTGAG 57.002 30.769 10.30 0.00 40.98 3.35
308 399 9.210329 CAAATTTCAAATCATTTGGACATCTGA 57.790 29.630 10.30 0.00 40.98 3.27
317 408 7.042187 TGTTCGGTCCAAATTTCAAATCATTTG 60.042 33.333 3.46 3.46 39.25 2.32
318 409 6.989169 TGTTCGGTCCAAATTTCAAATCATTT 59.011 30.769 0.00 0.00 0.00 2.32
319 410 6.520272 TGTTCGGTCCAAATTTCAAATCATT 58.480 32.000 0.00 0.00 0.00 2.57
320 411 6.095432 TGTTCGGTCCAAATTTCAAATCAT 57.905 33.333 0.00 0.00 0.00 2.45
321 412 5.521906 TGTTCGGTCCAAATTTCAAATCA 57.478 34.783 0.00 0.00 0.00 2.57
322 413 6.089417 GTGATGTTCGGTCCAAATTTCAAATC 59.911 38.462 0.00 0.00 0.00 2.17
323 414 5.925969 GTGATGTTCGGTCCAAATTTCAAAT 59.074 36.000 0.00 0.00 0.00 2.32
324 415 5.285651 GTGATGTTCGGTCCAAATTTCAAA 58.714 37.500 0.00 0.00 0.00 2.69
325 416 4.555708 CGTGATGTTCGGTCCAAATTTCAA 60.556 41.667 0.00 0.00 0.00 2.69
326 417 3.058570 CGTGATGTTCGGTCCAAATTTCA 60.059 43.478 0.00 0.00 0.00 2.69
327 418 3.058501 ACGTGATGTTCGGTCCAAATTTC 60.059 43.478 0.00 0.00 0.00 2.17
328 419 2.882137 ACGTGATGTTCGGTCCAAATTT 59.118 40.909 0.00 0.00 0.00 1.82
329 420 2.500229 ACGTGATGTTCGGTCCAAATT 58.500 42.857 0.00 0.00 0.00 1.82
330 421 2.178912 ACGTGATGTTCGGTCCAAAT 57.821 45.000 0.00 0.00 0.00 2.32
331 422 2.406130 GTACGTGATGTTCGGTCCAAA 58.594 47.619 0.00 0.00 0.00 3.28
332 423 1.337074 GGTACGTGATGTTCGGTCCAA 60.337 52.381 0.00 0.00 0.00 3.53
333 424 0.244450 GGTACGTGATGTTCGGTCCA 59.756 55.000 0.00 0.00 0.00 4.02
334 425 0.244450 TGGTACGTGATGTTCGGTCC 59.756 55.000 0.00 0.00 0.00 4.46
335 426 2.068837 TTGGTACGTGATGTTCGGTC 57.931 50.000 0.00 0.00 0.00 4.79
336 427 2.529780 TTTGGTACGTGATGTTCGGT 57.470 45.000 0.00 0.00 0.00 4.69
337 428 5.522460 AGATAATTTGGTACGTGATGTTCGG 59.478 40.000 0.00 0.00 0.00 4.30
338 429 6.583912 AGATAATTTGGTACGTGATGTTCG 57.416 37.500 0.00 0.00 0.00 3.95
339 430 7.493320 TGGTAGATAATTTGGTACGTGATGTTC 59.507 37.037 0.00 0.00 0.00 3.18
340 431 7.332557 TGGTAGATAATTTGGTACGTGATGTT 58.667 34.615 0.00 0.00 0.00 2.71
341 432 6.880484 TGGTAGATAATTTGGTACGTGATGT 58.120 36.000 0.00 0.00 0.00 3.06
342 433 7.571244 GCATGGTAGATAATTTGGTACGTGATG 60.571 40.741 0.00 0.00 0.00 3.07
343 434 6.426937 GCATGGTAGATAATTTGGTACGTGAT 59.573 38.462 0.00 0.00 0.00 3.06
344 435 5.756347 GCATGGTAGATAATTTGGTACGTGA 59.244 40.000 0.00 0.00 0.00 4.35
345 436 5.049680 GGCATGGTAGATAATTTGGTACGTG 60.050 44.000 0.00 0.00 0.00 4.49
346 437 5.061179 GGCATGGTAGATAATTTGGTACGT 58.939 41.667 0.00 0.00 0.00 3.57
347 438 5.060506 TGGCATGGTAGATAATTTGGTACG 58.939 41.667 0.00 0.00 0.00 3.67
348 439 6.952773 TTGGCATGGTAGATAATTTGGTAC 57.047 37.500 0.00 0.00 0.00 3.34
349 440 7.962995 TTTTGGCATGGTAGATAATTTGGTA 57.037 32.000 0.00 0.00 0.00 3.25
350 441 6.865834 TTTTGGCATGGTAGATAATTTGGT 57.134 33.333 0.00 0.00 0.00 3.67
412 503 3.504134 TCTGCACCAGCGCTAAATAAAAA 59.496 39.130 10.99 0.00 46.23 1.94
413 504 3.078097 TCTGCACCAGCGCTAAATAAAA 58.922 40.909 10.99 0.00 46.23 1.52
414 505 2.705730 TCTGCACCAGCGCTAAATAAA 58.294 42.857 10.99 0.00 46.23 1.40
415 506 2.394930 TCTGCACCAGCGCTAAATAA 57.605 45.000 10.99 0.00 46.23 1.40
416 507 2.620251 ATCTGCACCAGCGCTAAATA 57.380 45.000 10.99 0.00 46.23 1.40
417 508 2.158900 AGTATCTGCACCAGCGCTAAAT 60.159 45.455 10.99 0.00 46.23 1.40
418 509 1.207089 AGTATCTGCACCAGCGCTAAA 59.793 47.619 10.99 0.00 46.23 1.85
419 510 0.824109 AGTATCTGCACCAGCGCTAA 59.176 50.000 10.99 0.00 46.23 3.09
420 511 0.385751 GAGTATCTGCACCAGCGCTA 59.614 55.000 10.99 0.00 46.23 4.26
421 512 1.142748 GAGTATCTGCACCAGCGCT 59.857 57.895 2.64 2.64 46.23 5.92
422 513 1.884926 GGAGTATCTGCACCAGCGC 60.885 63.158 0.00 0.00 46.23 5.92
423 514 0.176680 AAGGAGTATCTGCACCAGCG 59.823 55.000 0.00 0.00 46.23 5.18
424 515 1.208052 TCAAGGAGTATCTGCACCAGC 59.792 52.381 0.00 0.00 42.57 4.85
425 516 3.529533 CTTCAAGGAGTATCTGCACCAG 58.470 50.000 0.00 0.00 33.73 4.00
426 517 2.355108 GCTTCAAGGAGTATCTGCACCA 60.355 50.000 0.00 0.00 33.73 4.17
427 518 2.284190 GCTTCAAGGAGTATCTGCACC 58.716 52.381 0.00 0.00 33.73 5.01
428 519 2.284190 GGCTTCAAGGAGTATCTGCAC 58.716 52.381 0.00 0.00 33.73 4.57
429 520 1.908619 TGGCTTCAAGGAGTATCTGCA 59.091 47.619 0.00 0.00 33.73 4.41
430 521 2.698855 TGGCTTCAAGGAGTATCTGC 57.301 50.000 0.00 0.00 33.73 4.26
431 522 4.142816 CGTTTTGGCTTCAAGGAGTATCTG 60.143 45.833 0.00 0.00 33.73 2.90
432 523 4.003648 CGTTTTGGCTTCAAGGAGTATCT 58.996 43.478 0.00 0.00 33.73 1.98
433 524 3.426292 GCGTTTTGGCTTCAAGGAGTATC 60.426 47.826 0.00 0.00 0.00 2.24
434 525 2.488153 GCGTTTTGGCTTCAAGGAGTAT 59.512 45.455 0.00 0.00 0.00 2.12
435 526 1.877443 GCGTTTTGGCTTCAAGGAGTA 59.123 47.619 0.00 0.00 0.00 2.59
436 527 0.668535 GCGTTTTGGCTTCAAGGAGT 59.331 50.000 0.00 0.00 0.00 3.85
437 528 0.039165 GGCGTTTTGGCTTCAAGGAG 60.039 55.000 0.00 0.00 40.72 3.69
438 529 2.037871 GGCGTTTTGGCTTCAAGGA 58.962 52.632 0.00 0.00 40.72 3.36
439 530 4.653555 GGCGTTTTGGCTTCAAGG 57.346 55.556 0.00 0.00 40.72 3.61
446 537 0.884704 TCTGAGTGAGGCGTTTTGGC 60.885 55.000 0.00 0.00 45.27 4.52
447 538 1.593196 TTCTGAGTGAGGCGTTTTGG 58.407 50.000 0.00 0.00 0.00 3.28
448 539 3.691049 TTTTCTGAGTGAGGCGTTTTG 57.309 42.857 0.00 0.00 0.00 2.44
449 540 4.097892 ACATTTTTCTGAGTGAGGCGTTTT 59.902 37.500 0.00 0.00 0.00 2.43
450 541 3.632145 ACATTTTTCTGAGTGAGGCGTTT 59.368 39.130 0.00 0.00 0.00 3.60
451 542 3.214328 ACATTTTTCTGAGTGAGGCGTT 58.786 40.909 0.00 0.00 0.00 4.84
452 543 2.808543 GACATTTTTCTGAGTGAGGCGT 59.191 45.455 0.00 0.00 0.00 5.68
453 544 2.160417 GGACATTTTTCTGAGTGAGGCG 59.840 50.000 0.00 0.00 0.00 5.52
454 545 3.416156 AGGACATTTTTCTGAGTGAGGC 58.584 45.455 0.00 0.00 0.00 4.70
455 546 6.234177 AGTAAGGACATTTTTCTGAGTGAGG 58.766 40.000 0.00 0.00 0.00 3.86
456 547 7.158021 AGAGTAAGGACATTTTTCTGAGTGAG 58.842 38.462 0.00 0.00 0.00 3.51
457 548 7.067496 AGAGTAAGGACATTTTTCTGAGTGA 57.933 36.000 0.00 0.00 0.00 3.41
458 549 6.370166 GGAGAGTAAGGACATTTTTCTGAGTG 59.630 42.308 0.00 0.00 0.00 3.51
459 550 6.468543 GGAGAGTAAGGACATTTTTCTGAGT 58.531 40.000 0.00 0.00 0.00 3.41
460 551 5.877564 GGGAGAGTAAGGACATTTTTCTGAG 59.122 44.000 0.00 0.00 0.00 3.35
461 552 5.568825 CGGGAGAGTAAGGACATTTTTCTGA 60.569 44.000 0.00 0.00 0.00 3.27
462 553 4.631813 CGGGAGAGTAAGGACATTTTTCTG 59.368 45.833 0.00 0.00 0.00 3.02
463 554 4.530946 TCGGGAGAGTAAGGACATTTTTCT 59.469 41.667 0.00 0.00 0.00 2.52
464 555 4.630505 GTCGGGAGAGTAAGGACATTTTTC 59.369 45.833 0.00 0.00 41.26 2.29
465 556 4.041198 TGTCGGGAGAGTAAGGACATTTTT 59.959 41.667 0.00 0.00 41.26 1.94
466 557 3.581332 TGTCGGGAGAGTAAGGACATTTT 59.419 43.478 0.00 0.00 41.26 1.82
467 558 3.170717 TGTCGGGAGAGTAAGGACATTT 58.829 45.455 0.00 0.00 41.26 2.32
468 559 2.816411 TGTCGGGAGAGTAAGGACATT 58.184 47.619 0.00 0.00 41.26 2.71
469 560 2.526888 TGTCGGGAGAGTAAGGACAT 57.473 50.000 0.00 0.00 41.26 3.06
470 561 2.291346 TGATGTCGGGAGAGTAAGGACA 60.291 50.000 0.00 0.00 41.26 4.02
471 562 2.376109 TGATGTCGGGAGAGTAAGGAC 58.624 52.381 0.00 0.00 41.26 3.85
472 563 2.820728 TGATGTCGGGAGAGTAAGGA 57.179 50.000 0.00 0.00 41.26 3.36
473 564 3.887621 TTTGATGTCGGGAGAGTAAGG 57.112 47.619 0.00 0.00 41.26 2.69
474 565 6.574350 AGTAATTTGATGTCGGGAGAGTAAG 58.426 40.000 0.00 0.00 41.26 2.34
482 573 5.181245 AGTGTTTGAGTAATTTGATGTCGGG 59.819 40.000 0.00 0.00 0.00 5.14
486 577 7.425606 GGTGAAGTGTTTGAGTAATTTGATGT 58.574 34.615 0.00 0.00 0.00 3.06
493 584 4.398319 CTGGGGTGAAGTGTTTGAGTAAT 58.602 43.478 0.00 0.00 0.00 1.89
504 595 0.779997 ATCTTTGGCTGGGGTGAAGT 59.220 50.000 0.00 0.00 0.00 3.01
509 600 1.550869 CCTTCAATCTTTGGCTGGGGT 60.551 52.381 0.00 0.00 0.00 4.95
512 603 2.892852 TGTTCCTTCAATCTTTGGCTGG 59.107 45.455 0.00 0.00 0.00 4.85
513 604 3.318839 TGTGTTCCTTCAATCTTTGGCTG 59.681 43.478 0.00 0.00 0.00 4.85
514 605 3.319122 GTGTGTTCCTTCAATCTTTGGCT 59.681 43.478 0.00 0.00 0.00 4.75
529 1005 1.233019 AGATGCACTGCTGTGTGTTC 58.767 50.000 22.70 16.51 45.44 3.18
538 1014 3.738282 CCGAGTTATCTAAGATGCACTGC 59.262 47.826 0.00 0.00 0.00 4.40
570 1046 2.097954 TGCTGCTGTGTTTCTTCAGTTG 59.902 45.455 0.00 0.00 34.57 3.16
648 1124 2.047844 GCGCTGCTGACTTCCTCA 60.048 61.111 0.00 0.00 0.00 3.86
669 1150 1.778027 CGGGCCTTTTCGTTTCGTGT 61.778 55.000 0.84 0.00 0.00 4.49
696 1185 2.528127 TGGCACGAGGGGGAAGAA 60.528 61.111 0.00 0.00 0.00 2.52
761 1253 1.228490 AGGAACTGGGTCGAGTCGT 60.228 57.895 13.12 0.00 37.18 4.34
832 1328 3.691342 TGAGGGGAACGCACGGAG 61.691 66.667 0.00 0.00 46.88 4.63
833 1329 3.998672 GTGAGGGGAACGCACGGA 61.999 66.667 0.00 0.00 46.88 4.69
846 1365 2.698855 CCACTGGATTGGTAGGTGAG 57.301 55.000 0.00 0.00 0.00 3.51
890 1425 8.082242 GTGAAAAATTTCCAGTAAGTGTAGCAT 58.918 33.333 3.60 0.00 36.36 3.79
891 1426 7.422399 GTGAAAAATTTCCAGTAAGTGTAGCA 58.578 34.615 3.60 0.00 36.36 3.49
892 1427 6.577427 CGTGAAAAATTTCCAGTAAGTGTAGC 59.423 38.462 3.60 0.00 36.36 3.58
893 1428 7.041644 TCCGTGAAAAATTTCCAGTAAGTGTAG 60.042 37.037 3.60 0.00 36.36 2.74
894 1429 6.766944 TCCGTGAAAAATTTCCAGTAAGTGTA 59.233 34.615 3.60 0.00 36.36 2.90
895 1430 5.591067 TCCGTGAAAAATTTCCAGTAAGTGT 59.409 36.000 3.60 0.00 36.36 3.55
896 1431 5.912955 GTCCGTGAAAAATTTCCAGTAAGTG 59.087 40.000 3.60 0.00 36.36 3.16
897 1432 5.277634 CGTCCGTGAAAAATTTCCAGTAAGT 60.278 40.000 3.60 0.00 36.36 2.24
898 1433 5.144359 CGTCCGTGAAAAATTTCCAGTAAG 58.856 41.667 3.60 0.00 36.36 2.34
899 1434 4.023878 CCGTCCGTGAAAAATTTCCAGTAA 60.024 41.667 3.60 0.00 36.36 2.24
900 1435 3.499157 CCGTCCGTGAAAAATTTCCAGTA 59.501 43.478 3.60 0.00 36.36 2.74
901 1436 2.292292 CCGTCCGTGAAAAATTTCCAGT 59.708 45.455 3.60 0.00 36.36 4.00
902 1437 2.292292 ACCGTCCGTGAAAAATTTCCAG 59.708 45.455 3.60 0.00 36.36 3.86
903 1438 2.299521 ACCGTCCGTGAAAAATTTCCA 58.700 42.857 3.60 0.00 36.36 3.53
904 1439 3.668757 GCTACCGTCCGTGAAAAATTTCC 60.669 47.826 3.60 0.00 36.36 3.13
905 1440 3.187842 AGCTACCGTCCGTGAAAAATTTC 59.812 43.478 0.00 0.00 37.69 2.17
906 1441 3.143728 AGCTACCGTCCGTGAAAAATTT 58.856 40.909 0.00 0.00 0.00 1.82
907 1442 2.774687 AGCTACCGTCCGTGAAAAATT 58.225 42.857 0.00 0.00 0.00 1.82
908 1443 2.467566 AGCTACCGTCCGTGAAAAAT 57.532 45.000 0.00 0.00 0.00 1.82
909 1444 2.243602 AAGCTACCGTCCGTGAAAAA 57.756 45.000 0.00 0.00 0.00 1.94
910 1445 2.035704 TGTAAGCTACCGTCCGTGAAAA 59.964 45.455 0.00 0.00 0.00 2.29
911 1446 1.612950 TGTAAGCTACCGTCCGTGAAA 59.387 47.619 0.00 0.00 0.00 2.69
912 1447 1.200716 CTGTAAGCTACCGTCCGTGAA 59.799 52.381 0.00 0.00 0.00 3.18
913 1448 0.806868 CTGTAAGCTACCGTCCGTGA 59.193 55.000 0.00 0.00 0.00 4.35
914 1449 0.806868 TCTGTAAGCTACCGTCCGTG 59.193 55.000 0.00 0.00 0.00 4.94
915 1450 1.404391 CATCTGTAAGCTACCGTCCGT 59.596 52.381 0.00 0.00 0.00 4.69
916 1451 1.269102 CCATCTGTAAGCTACCGTCCG 60.269 57.143 0.00 0.00 0.00 4.79
917 1452 2.029623 TCCATCTGTAAGCTACCGTCC 58.970 52.381 0.00 0.00 0.00 4.79
918 1453 2.034812 CCTCCATCTGTAAGCTACCGTC 59.965 54.545 0.00 0.00 0.00 4.79
919 1454 2.032620 CCTCCATCTGTAAGCTACCGT 58.967 52.381 0.00 0.00 0.00 4.83
920 1455 2.032620 ACCTCCATCTGTAAGCTACCG 58.967 52.381 0.00 0.00 0.00 4.02
921 1456 2.103263 CCACCTCCATCTGTAAGCTACC 59.897 54.545 0.00 0.00 0.00 3.18
922 1457 2.483889 GCCACCTCCATCTGTAAGCTAC 60.484 54.545 0.00 0.00 0.00 3.58
923 1458 1.762957 GCCACCTCCATCTGTAAGCTA 59.237 52.381 0.00 0.00 0.00 3.32
924 1459 0.543749 GCCACCTCCATCTGTAAGCT 59.456 55.000 0.00 0.00 0.00 3.74
925 1460 0.253044 TGCCACCTCCATCTGTAAGC 59.747 55.000 0.00 0.00 0.00 3.09
926 1461 1.745141 GCTGCCACCTCCATCTGTAAG 60.745 57.143 0.00 0.00 0.00 2.34
927 1462 0.253044 GCTGCCACCTCCATCTGTAA 59.747 55.000 0.00 0.00 0.00 2.41
928 1463 0.909133 TGCTGCCACCTCCATCTGTA 60.909 55.000 0.00 0.00 0.00 2.74
929 1464 1.569030 ATGCTGCCACCTCCATCTGT 61.569 55.000 0.00 0.00 0.00 3.41
930 1465 0.395311 AATGCTGCCACCTCCATCTG 60.395 55.000 0.00 0.00 0.00 2.90
931 1466 1.216064 TAATGCTGCCACCTCCATCT 58.784 50.000 0.00 0.00 0.00 2.90
932 1467 2.057137 TTAATGCTGCCACCTCCATC 57.943 50.000 0.00 0.00 0.00 3.51
933 1468 2.530460 TTTAATGCTGCCACCTCCAT 57.470 45.000 0.00 0.00 0.00 3.41
934 1469 2.530460 ATTTAATGCTGCCACCTCCA 57.470 45.000 0.00 0.00 0.00 3.86
935 1470 3.026694 AGAATTTAATGCTGCCACCTCC 58.973 45.455 0.00 0.00 0.00 4.30
936 1471 4.158394 TGAAGAATTTAATGCTGCCACCTC 59.842 41.667 0.00 0.00 0.00 3.85
937 1472 4.082026 GTGAAGAATTTAATGCTGCCACCT 60.082 41.667 0.00 0.00 0.00 4.00
938 1473 4.176271 GTGAAGAATTTAATGCTGCCACC 58.824 43.478 0.00 0.00 0.00 4.61
939 1474 4.176271 GGTGAAGAATTTAATGCTGCCAC 58.824 43.478 9.06 9.06 0.00 5.01
940 1475 3.831333 TGGTGAAGAATTTAATGCTGCCA 59.169 39.130 0.00 0.00 0.00 4.92
941 1476 4.454728 TGGTGAAGAATTTAATGCTGCC 57.545 40.909 0.00 0.00 0.00 4.85
942 1477 4.627035 GGTTGGTGAAGAATTTAATGCTGC 59.373 41.667 0.00 0.00 0.00 5.25
943 1478 5.170748 GGGTTGGTGAAGAATTTAATGCTG 58.829 41.667 0.00 0.00 0.00 4.41
944 1479 4.837860 TGGGTTGGTGAAGAATTTAATGCT 59.162 37.500 0.00 0.00 0.00 3.79
945 1480 4.929211 GTGGGTTGGTGAAGAATTTAATGC 59.071 41.667 0.00 0.00 0.00 3.56
946 1481 6.209391 AGAGTGGGTTGGTGAAGAATTTAATG 59.791 38.462 0.00 0.00 0.00 1.90
947 1482 6.314917 AGAGTGGGTTGGTGAAGAATTTAAT 58.685 36.000 0.00 0.00 0.00 1.40
948 1483 5.701224 AGAGTGGGTTGGTGAAGAATTTAA 58.299 37.500 0.00 0.00 0.00 1.52
949 1484 5.163141 TGAGAGTGGGTTGGTGAAGAATTTA 60.163 40.000 0.00 0.00 0.00 1.40
950 1485 4.145052 GAGAGTGGGTTGGTGAAGAATTT 58.855 43.478 0.00 0.00 0.00 1.82
951 1486 3.138283 TGAGAGTGGGTTGGTGAAGAATT 59.862 43.478 0.00 0.00 0.00 2.17
952 1487 2.711009 TGAGAGTGGGTTGGTGAAGAAT 59.289 45.455 0.00 0.00 0.00 2.40
953 1488 2.123589 TGAGAGTGGGTTGGTGAAGAA 58.876 47.619 0.00 0.00 0.00 2.52
970 1505 6.307776 TGAGGAGGTAGGTATGACTTATGAG 58.692 44.000 0.00 0.00 0.00 2.90
971 1506 6.275692 TGAGGAGGTAGGTATGACTTATGA 57.724 41.667 0.00 0.00 0.00 2.15
974 1509 4.168283 AGCTGAGGAGGTAGGTATGACTTA 59.832 45.833 0.00 0.00 0.00 2.24
976 1511 2.516277 AGCTGAGGAGGTAGGTATGACT 59.484 50.000 0.00 0.00 0.00 3.41
977 1512 2.625790 CAGCTGAGGAGGTAGGTATGAC 59.374 54.545 8.42 0.00 0.00 3.06
1087 1653 3.900892 GCTAGCTAGACGCCGGCA 61.901 66.667 28.98 5.45 40.39 5.69
1088 1654 1.793134 TAAGCTAGCTAGACGCCGGC 61.793 60.000 25.15 19.07 40.39 6.13
1089 1655 0.040246 GTAAGCTAGCTAGACGCCGG 60.040 60.000 25.15 0.00 40.39 6.13
1090 1656 0.945813 AGTAAGCTAGCTAGACGCCG 59.054 55.000 25.15 0.00 40.39 6.46
1091 1657 3.181489 TGAAAGTAAGCTAGCTAGACGCC 60.181 47.826 25.15 13.03 40.39 5.68
1092 1658 4.030134 TGAAAGTAAGCTAGCTAGACGC 57.970 45.455 25.15 10.20 39.57 5.19
1093 1659 5.487153 TCTGAAAGTAAGCTAGCTAGACG 57.513 43.478 25.15 6.45 33.76 4.18
1094 1660 6.037726 GGTTCTGAAAGTAAGCTAGCTAGAC 58.962 44.000 25.15 18.61 33.76 2.59
1095 1661 5.715279 TGGTTCTGAAAGTAAGCTAGCTAGA 59.285 40.000 25.15 12.34 33.76 2.43
1096 1662 5.967088 TGGTTCTGAAAGTAAGCTAGCTAG 58.033 41.667 19.70 16.84 33.76 3.42
1097 1663 5.995565 TGGTTCTGAAAGTAAGCTAGCTA 57.004 39.130 19.70 3.63 33.76 3.32
1099 1665 5.238583 TCTTGGTTCTGAAAGTAAGCTAGC 58.761 41.667 6.62 6.62 30.95 3.42
1100 1666 8.035394 TGTATCTTGGTTCTGAAAGTAAGCTAG 58.965 37.037 0.00 0.00 33.76 3.42
1101 1667 7.817962 GTGTATCTTGGTTCTGAAAGTAAGCTA 59.182 37.037 0.00 0.00 33.76 3.32
1104 1670 7.962964 TGTGTATCTTGGTTCTGAAAGTAAG 57.037 36.000 0.00 0.00 33.76 2.34
1106 1672 8.590204 TGTATGTGTATCTTGGTTCTGAAAGTA 58.410 33.333 0.00 0.00 33.76 2.24
1107 1673 7.387948 GTGTATGTGTATCTTGGTTCTGAAAGT 59.612 37.037 0.00 0.00 33.76 2.66
1108 1674 7.148407 GGTGTATGTGTATCTTGGTTCTGAAAG 60.148 40.741 0.00 0.00 0.00 2.62
1109 1675 6.653320 GGTGTATGTGTATCTTGGTTCTGAAA 59.347 38.462 0.00 0.00 0.00 2.69
1110 1676 6.013725 AGGTGTATGTGTATCTTGGTTCTGAA 60.014 38.462 0.00 0.00 0.00 3.02
1111 1677 5.483937 AGGTGTATGTGTATCTTGGTTCTGA 59.516 40.000 0.00 0.00 0.00 3.27
1112 1678 5.582269 CAGGTGTATGTGTATCTTGGTTCTG 59.418 44.000 0.00 0.00 0.00 3.02
1113 1679 5.734720 CAGGTGTATGTGTATCTTGGTTCT 58.265 41.667 0.00 0.00 0.00 3.01
1114 1680 4.332819 GCAGGTGTATGTGTATCTTGGTTC 59.667 45.833 0.00 0.00 0.00 3.62
1117 1683 3.206150 GGCAGGTGTATGTGTATCTTGG 58.794 50.000 0.00 0.00 0.00 3.61
1119 1686 2.158957 CCGGCAGGTGTATGTGTATCTT 60.159 50.000 0.00 0.00 0.00 2.40
1167 1747 2.158957 CCGGCAGGTGTATGTGTATCTT 60.159 50.000 0.00 0.00 0.00 2.40
1203 1836 2.414825 GCAGAGAAGTACTGAAGCAAGC 59.585 50.000 0.00 0.00 37.54 4.01
1211 1848 4.738124 TCGAAAGATGCAGAGAAGTACTG 58.262 43.478 0.00 0.00 35.23 2.74
1391 2028 3.716195 CCCTCCATGGTCACCGCA 61.716 66.667 12.58 0.00 0.00 5.69
1393 2030 4.838152 CGCCCTCCATGGTCACCG 62.838 72.222 12.58 7.39 0.00 4.94
1487 2124 4.821589 CTCTCCTTGACGCGGCCC 62.822 72.222 10.82 0.00 0.00 5.80
1583 2220 2.038975 CCCTCCTTGGTCCTCCGA 59.961 66.667 0.00 0.00 36.30 4.55
2089 2763 0.892358 CTTCCTTTGGCTGCAGCTCA 60.892 55.000 35.82 27.97 41.70 4.26
2326 3000 1.934399 GCGAGCATCATGTAGGAGCTC 60.934 57.143 4.71 4.71 46.07 4.09
2434 3108 1.742761 CAGCACGGATGACCTCAATT 58.257 50.000 0.00 0.00 0.00 2.32
2641 3315 1.414919 AGGCCGTTGTTGTAGAAGTCA 59.585 47.619 0.00 0.00 0.00 3.41
2659 3333 1.339151 CCGGAGAGGTTTGAAGGAAGG 60.339 57.143 0.00 0.00 34.51 3.46
2854 3528 3.054875 TGAGCTTGAGTATGTCAATGGCT 60.055 43.478 6.25 6.25 45.02 4.75
3193 3867 1.512734 GAATGTGGCAAGCTTCGCG 60.513 57.895 0.00 0.00 0.00 5.87
3196 3870 0.179179 GCTCGAATGTGGCAAGCTTC 60.179 55.000 0.00 0.00 0.00 3.86
3238 3912 2.185608 GCAGCCTCGACCTCCTTC 59.814 66.667 0.00 0.00 0.00 3.46
3677 4380 9.623687 CACACTAACTTTTTAACTTACGTACAC 57.376 33.333 0.00 0.00 0.00 2.90
3714 4421 5.894298 TGGAGCCAGTAGATTTATCATGT 57.106 39.130 0.00 0.00 0.00 3.21
3755 4462 1.227263 CGGACTATTGCCACGAGGG 60.227 63.158 0.00 0.00 40.85 4.30
3763 4470 2.973945 AGTTGGTTCTCGGACTATTGC 58.026 47.619 0.00 0.00 0.00 3.56
3857 4564 7.764443 CCCGTTCATAGAATTCAGAGAACTTAA 59.236 37.037 22.83 1.74 34.71 1.85
3875 4582 3.728373 GCCCTCACCCCCGTTCAT 61.728 66.667 0.00 0.00 0.00 2.57
3885 4592 3.006247 GTGAATTCAGAGAAGCCCTCAC 58.994 50.000 8.80 0.00 44.40 3.51
3934 4641 8.988934 CAAACTGAAACTAGTAAGCAGAATACA 58.011 33.333 20.09 0.00 0.00 2.29
3958 4666 4.209538 CATGTGCCTCCATAGAAATCCAA 58.790 43.478 0.00 0.00 0.00 3.53
4011 4725 1.199615 TGGATTCACAGGTATGCGGA 58.800 50.000 0.00 0.00 0.00 5.54
4270 7014 2.091541 CGGTGCAAAGGGACATACATT 58.908 47.619 0.00 0.00 37.04 2.71
4320 7064 6.897706 TGACATCTTCATTTGATCCAACAA 57.102 33.333 0.00 0.00 0.00 2.83
4380 7179 6.105333 AGATGACTACTTGACTGATTTCTGC 58.895 40.000 0.00 0.00 0.00 4.26
4387 7186 6.223852 GGTTTGAAGATGACTACTTGACTGA 58.776 40.000 0.00 0.00 0.00 3.41
4467 8900 4.023536 GGAAGATTGCAAAACACCGACTTA 60.024 41.667 1.71 0.00 0.00 2.24
4482 8915 5.181748 ACTAGCAGCTTTGTAGGAAGATTG 58.818 41.667 0.00 0.00 0.00 2.67
4569 9003 8.091449 CCAGGCATTGTACCATTTTAACTTAAA 58.909 33.333 0.00 0.00 0.00 1.52
4570 9004 7.233757 ACCAGGCATTGTACCATTTTAACTTAA 59.766 33.333 0.00 0.00 0.00 1.85
4650 9090 5.618640 GCACTATTTGAAGTTGCCTCAAGAG 60.619 44.000 0.00 0.00 0.00 2.85
4669 9109 8.845227 TGAAAACACAATAGATTCTTTGCACTA 58.155 29.630 0.00 0.00 0.00 2.74
4776 9216 2.087646 GCTCCAGAACTCCAACCATTC 58.912 52.381 0.00 0.00 0.00 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.