Multiple sequence alignment - TraesCS2A01G380700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G380700 chr2A 100.000 5008 0 0 1 5008 624309260 624314267 0.000000e+00 9249.0
1 TraesCS2A01G380700 chr2A 90.909 242 21 1 666 906 753568847 753568606 1.740000e-84 324.0
2 TraesCS2A01G380700 chr2A 88.583 254 28 1 654 906 444369669 444369416 1.750000e-79 307.0
3 TraesCS2A01G380700 chr2A 87.407 270 29 5 639 906 84977800 84977534 6.300000e-79 305.0
4 TraesCS2A01G380700 chr2B 94.205 1691 64 16 2409 4081 564876118 564877792 0.000000e+00 2549.0
5 TraesCS2A01G380700 chr2B 90.213 1359 64 20 961 2292 564874430 564875746 0.000000e+00 1709.0
6 TraesCS2A01G380700 chr2B 86.182 825 72 24 4132 4942 564877794 564878590 0.000000e+00 854.0
7 TraesCS2A01G380700 chr2D 88.097 1571 112 35 2993 4525 481573593 481575126 0.000000e+00 1796.0
8 TraesCS2A01G380700 chr2D 90.505 1306 73 26 961 2256 481571553 481572817 0.000000e+00 1677.0
9 TraesCS2A01G380700 chr2D 85.118 551 69 10 41 584 522552170 522551626 7.330000e-153 551.0
10 TraesCS2A01G380700 chr2D 89.634 328 22 7 4574 4898 481575197 481575515 1.680000e-109 407.0
11 TraesCS2A01G380700 chr2D 96.035 227 8 1 2745 2970 481573374 481573600 7.920000e-98 368.0
12 TraesCS2A01G380700 chr2D 83.740 246 25 7 2254 2499 481572871 481573101 8.440000e-53 219.0
13 TraesCS2A01G380700 chr2D 85.897 156 13 3 2555 2710 481573230 481573376 1.870000e-34 158.0
14 TraesCS2A01G380700 chr7D 89.966 588 55 3 1 584 102570619 102571206 0.000000e+00 756.0
15 TraesCS2A01G380700 chr7D 90.756 357 31 1 7 361 290518845 290519201 4.540000e-130 475.0
16 TraesCS2A01G380700 chr7B 83.502 594 85 10 1 584 511919189 511919779 4.410000e-150 542.0
17 TraesCS2A01G380700 chr7B 83.505 582 89 6 8 584 511843216 511843795 2.050000e-148 536.0
18 TraesCS2A01G380700 chr4D 91.969 386 27 3 203 584 417363327 417362942 5.700000e-149 538.0
19 TraesCS2A01G380700 chr4D 82.852 589 94 6 1 584 374627570 374626984 5.750000e-144 521.0
20 TraesCS2A01G380700 chr4D 89.604 202 20 1 7 208 417365209 417365009 6.430000e-64 255.0
21 TraesCS2A01G380700 chr3D 87.582 459 54 2 1 456 85212686 85213144 3.430000e-146 529.0
22 TraesCS2A01G380700 chr1A 82.704 503 81 5 87 584 179549948 179550449 4.600000e-120 442.0
23 TraesCS2A01G380700 chr3A 91.949 236 19 0 671 906 550659561 550659326 1.040000e-86 331.0
24 TraesCS2A01G380700 chr1B 90.833 240 21 1 667 906 152079622 152079860 2.250000e-83 320.0
25 TraesCS2A01G380700 chr1B 78.857 175 34 3 412 584 659541430 659541257 1.140000e-21 115.0
26 TraesCS2A01G380700 chr3B 90.204 245 23 1 662 906 662420056 662419813 8.090000e-83 318.0
27 TraesCS2A01G380700 chr3B 89.879 247 23 1 662 906 742450170 742449924 2.910000e-82 316.0
28 TraesCS2A01G380700 chr5A 89.286 252 25 2 656 906 636223078 636223328 1.050000e-81 315.0
29 TraesCS2A01G380700 chr5A 100.000 30 0 0 4300 4329 598853064 598853035 7.000000e-04 56.5
30 TraesCS2A01G380700 chr6A 89.113 248 27 0 659 906 111203011 111203258 4.870000e-80 309.0
31 TraesCS2A01G380700 chr4B 88.350 206 23 1 380 584 545232889 545233094 3.870000e-61 246.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G380700 chr2A 624309260 624314267 5007 False 9249.000000 9249 100.000000 1 5008 1 chr2A.!!$F1 5007
1 TraesCS2A01G380700 chr2B 564874430 564878590 4160 False 1704.000000 2549 90.200000 961 4942 3 chr2B.!!$F1 3981
2 TraesCS2A01G380700 chr2D 481571553 481575515 3962 False 770.833333 1796 88.984667 961 4898 6 chr2D.!!$F1 3937
3 TraesCS2A01G380700 chr2D 522551626 522552170 544 True 551.000000 551 85.118000 41 584 1 chr2D.!!$R1 543
4 TraesCS2A01G380700 chr7D 102570619 102571206 587 False 756.000000 756 89.966000 1 584 1 chr7D.!!$F1 583
5 TraesCS2A01G380700 chr7B 511919189 511919779 590 False 542.000000 542 83.502000 1 584 1 chr7B.!!$F2 583
6 TraesCS2A01G380700 chr7B 511843216 511843795 579 False 536.000000 536 83.505000 8 584 1 chr7B.!!$F1 576
7 TraesCS2A01G380700 chr4D 374626984 374627570 586 True 521.000000 521 82.852000 1 584 1 chr4D.!!$R1 583
8 TraesCS2A01G380700 chr4D 417362942 417365209 2267 True 396.500000 538 90.786500 7 584 2 chr4D.!!$R2 577
9 TraesCS2A01G380700 chr1A 179549948 179550449 501 False 442.000000 442 82.704000 87 584 1 chr1A.!!$F1 497

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
832 2528 0.316841 TTTTTGCTCCCGCCACAATC 59.683 50.0 0.00 0.00 34.43 2.67 F
1787 3496 0.321919 CAGGACTAAGCTTGCAGGCA 60.322 55.0 23.85 1.69 34.17 4.75 F
1788 3497 0.322008 AGGACTAAGCTTGCAGGCAC 60.322 55.0 23.85 8.27 34.17 5.01 F
1790 3499 0.951040 GACTAAGCTTGCAGGCACGT 60.951 55.0 23.85 15.58 34.17 4.49 F
3246 5379 0.667184 CGGCCATGAAAACAAGCACC 60.667 55.0 2.24 0.00 0.00 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2593 4709 0.116342 TCTACAGGCAAGGGAGTGGA 59.884 55.000 0.00 0.00 0.00 4.02 R
3224 5357 0.313672 GCTTGTTTTCATGGCCGACA 59.686 50.000 0.00 0.00 0.00 4.35 R
3228 5361 0.667184 CGGTGCTTGTTTTCATGGCC 60.667 55.000 0.00 0.00 0.00 5.36 R
3609 5760 2.162208 TGTGCTTTTGCCTTCGATGATC 59.838 45.455 0.00 0.00 46.87 2.92 R
4968 7168 0.038159 AGACTGTCTACCTGCGCAAC 60.038 55.000 13.05 6.92 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.753452 TGGCAACTTAAAACAACGACCA 59.247 40.909 0.00 0.00 37.61 4.02
56 57 4.443063 GGCAACTTAAAACAACGACCATTC 59.557 41.667 0.00 0.00 0.00 2.67
314 2004 9.665719 TCTGCATATTATGAAGTTTGTAGTTGA 57.334 29.630 10.83 0.00 37.22 3.18
450 2145 8.766000 TTTTGAGAGTCGTGCTGTTAATTATA 57.234 30.769 0.00 0.00 0.00 0.98
456 2151 7.495934 AGAGTCGTGCTGTTAATTATAAAGCAT 59.504 33.333 15.95 5.01 44.93 3.79
458 2153 8.548721 AGTCGTGCTGTTAATTATAAAGCATAC 58.451 33.333 15.95 15.89 44.93 2.39
492 2187 4.993705 TTTTCTCTTTCTAGAGGCCCAA 57.006 40.909 0.00 0.00 46.57 4.12
506 2201 1.234821 GCCCAAGTCGTCATGTTTGA 58.765 50.000 0.00 0.00 0.00 2.69
532 2227 2.955660 GTCAGTCCCATGACCAAAAACA 59.044 45.455 0.00 0.00 43.12 2.83
541 2236 1.678627 TGACCAAAAACACATCCCACG 59.321 47.619 0.00 0.00 0.00 4.94
587 2283 4.572985 GGTGTTTTACCGCTAAAAGGTT 57.427 40.909 0.00 0.00 42.81 3.50
588 2284 5.687770 GGTGTTTTACCGCTAAAAGGTTA 57.312 39.130 0.00 0.00 42.81 2.85
589 2285 6.070897 GGTGTTTTACCGCTAAAAGGTTAA 57.929 37.500 0.00 0.00 42.81 2.01
590 2286 6.502652 GGTGTTTTACCGCTAAAAGGTTAAA 58.497 36.000 0.00 0.00 42.81 1.52
591 2287 6.977502 GGTGTTTTACCGCTAAAAGGTTAAAA 59.022 34.615 1.86 1.68 40.48 1.52
592 2288 7.652909 GGTGTTTTACCGCTAAAAGGTTAAAAT 59.347 33.333 1.86 0.00 40.48 1.82
593 2289 9.033481 GTGTTTTACCGCTAAAAGGTTAAAATT 57.967 29.630 1.86 0.00 40.48 1.82
594 2290 9.032420 TGTTTTACCGCTAAAAGGTTAAAATTG 57.968 29.630 1.86 0.00 40.48 2.32
595 2291 7.640616 TTTACCGCTAAAAGGTTAAAATTGC 57.359 32.000 0.00 0.00 42.81 3.56
596 2292 4.562082 ACCGCTAAAAGGTTAAAATTGCC 58.438 39.130 0.00 0.00 39.29 4.52
597 2293 4.282449 ACCGCTAAAAGGTTAAAATTGCCT 59.718 37.500 0.00 0.00 39.29 4.75
598 2294 5.477637 ACCGCTAAAAGGTTAAAATTGCCTA 59.522 36.000 0.00 0.00 39.29 3.93
599 2295 6.015265 ACCGCTAAAAGGTTAAAATTGCCTAA 60.015 34.615 0.00 0.00 39.29 2.69
600 2296 6.869388 CCGCTAAAAGGTTAAAATTGCCTAAA 59.131 34.615 0.00 0.00 31.43 1.85
601 2297 7.385478 CCGCTAAAAGGTTAAAATTGCCTAAAA 59.615 33.333 0.00 0.00 31.43 1.52
602 2298 8.766151 CGCTAAAAGGTTAAAATTGCCTAAAAA 58.234 29.630 0.00 0.00 31.43 1.94
650 2346 7.502120 TTCAGATCCTGAAAAACTTTCTCAG 57.498 36.000 6.91 0.00 45.84 3.35
651 2347 6.595682 TCAGATCCTGAAAAACTTTCTCAGT 58.404 36.000 4.51 0.00 37.57 3.41
652 2348 7.056635 TCAGATCCTGAAAAACTTTCTCAGTT 58.943 34.615 4.51 0.00 41.58 3.16
653 2349 8.210946 TCAGATCCTGAAAAACTTTCTCAGTTA 58.789 33.333 4.51 0.00 40.13 2.24
654 2350 9.007901 CAGATCCTGAAAAACTTTCTCAGTTAT 57.992 33.333 4.51 0.00 38.03 1.89
655 2351 9.225436 AGATCCTGAAAAACTTTCTCAGTTATC 57.775 33.333 4.51 6.68 45.77 1.75
656 2352 8.924511 ATCCTGAAAAACTTTCTCAGTTATCA 57.075 30.769 4.51 0.00 45.77 2.15
657 2353 8.746052 TCCTGAAAAACTTTCTCAGTTATCAA 57.254 30.769 4.51 0.00 45.77 2.57
658 2354 9.184523 TCCTGAAAAACTTTCTCAGTTATCAAA 57.815 29.630 4.51 0.00 45.77 2.69
659 2355 9.801873 CCTGAAAAACTTTCTCAGTTATCAAAA 57.198 29.630 4.51 0.00 45.77 2.44
697 2393 8.621286 ACTCCCTTCATTTTAAAATATAGTGCG 58.379 33.333 12.98 3.58 0.00 5.34
698 2394 8.514330 TCCCTTCATTTTAAAATATAGTGCGT 57.486 30.769 12.98 0.00 0.00 5.24
699 2395 8.617809 TCCCTTCATTTTAAAATATAGTGCGTC 58.382 33.333 12.98 0.00 0.00 5.19
700 2396 8.621286 CCCTTCATTTTAAAATATAGTGCGTCT 58.379 33.333 12.98 0.00 0.00 4.18
711 2407 3.599412 GTGCGTCTACACTTCCCAA 57.401 52.632 0.00 0.00 37.58 4.12
712 2408 1.429463 GTGCGTCTACACTTCCCAAG 58.571 55.000 0.00 0.00 37.58 3.61
713 2409 0.320374 TGCGTCTACACTTCCCAAGG 59.680 55.000 0.00 0.00 0.00 3.61
714 2410 0.320697 GCGTCTACACTTCCCAAGGT 59.679 55.000 0.00 0.00 0.00 3.50
715 2411 1.270678 GCGTCTACACTTCCCAAGGTT 60.271 52.381 0.00 0.00 0.00 3.50
716 2412 2.685100 CGTCTACACTTCCCAAGGTTC 58.315 52.381 0.00 0.00 0.00 3.62
717 2413 2.036733 CGTCTACACTTCCCAAGGTTCA 59.963 50.000 0.00 0.00 0.00 3.18
718 2414 3.493699 CGTCTACACTTCCCAAGGTTCAA 60.494 47.826 0.00 0.00 0.00 2.69
719 2415 3.813724 GTCTACACTTCCCAAGGTTCAAC 59.186 47.826 0.00 0.00 0.00 3.18
720 2416 3.714798 TCTACACTTCCCAAGGTTCAACT 59.285 43.478 0.00 0.00 0.00 3.16
721 2417 3.382083 ACACTTCCCAAGGTTCAACTT 57.618 42.857 0.00 0.00 0.00 2.66
722 2418 3.708451 ACACTTCCCAAGGTTCAACTTT 58.292 40.909 0.00 0.00 0.00 2.66
723 2419 3.447229 ACACTTCCCAAGGTTCAACTTTG 59.553 43.478 5.40 5.40 35.28 2.77
724 2420 3.699038 CACTTCCCAAGGTTCAACTTTGA 59.301 43.478 13.76 0.00 37.36 2.69
725 2421 3.699538 ACTTCCCAAGGTTCAACTTTGAC 59.300 43.478 13.76 0.00 37.36 3.18
726 2422 2.661718 TCCCAAGGTTCAACTTTGACC 58.338 47.619 13.76 0.00 37.36 4.02
727 2423 2.024846 TCCCAAGGTTCAACTTTGACCA 60.025 45.455 13.76 0.00 37.36 4.02
728 2424 2.965147 CCCAAGGTTCAACTTTGACCAT 59.035 45.455 13.76 0.00 37.36 3.55
729 2425 4.141135 TCCCAAGGTTCAACTTTGACCATA 60.141 41.667 13.76 0.00 37.36 2.74
730 2426 4.586841 CCCAAGGTTCAACTTTGACCATAA 59.413 41.667 13.76 0.00 37.36 1.90
731 2427 5.069781 CCCAAGGTTCAACTTTGACCATAAA 59.930 40.000 13.76 0.00 37.36 1.40
732 2428 6.239572 CCCAAGGTTCAACTTTGACCATAAAT 60.240 38.462 13.76 0.00 37.36 1.40
733 2429 7.216494 CCAAGGTTCAACTTTGACCATAAATT 58.784 34.615 13.76 0.00 37.36 1.82
734 2430 7.714813 CCAAGGTTCAACTTTGACCATAAATTT 59.285 33.333 13.76 0.00 37.36 1.82
735 2431 9.757227 CAAGGTTCAACTTTGACCATAAATTTA 57.243 29.630 6.54 0.00 37.36 1.40
737 2433 9.758651 AGGTTCAACTTTGACCATAAATTTAAC 57.241 29.630 1.21 0.00 36.83 2.01
738 2434 8.984764 GGTTCAACTTTGACCATAAATTTAACC 58.015 33.333 1.21 0.00 36.83 2.85
739 2435 9.535878 GTTCAACTTTGACCATAAATTTAACCA 57.464 29.630 1.21 0.00 36.83 3.67
741 2437 9.535878 TCAACTTTGACCATAAATTTAACCAAC 57.464 29.630 1.21 0.00 31.01 3.77
742 2438 8.484008 CAACTTTGACCATAAATTTAACCAACG 58.516 33.333 1.21 5.06 0.00 4.10
743 2439 7.942990 ACTTTGACCATAAATTTAACCAACGA 58.057 30.769 1.21 0.00 0.00 3.85
744 2440 8.079809 ACTTTGACCATAAATTTAACCAACGAG 58.920 33.333 1.21 3.35 0.00 4.18
745 2441 7.747155 TTGACCATAAATTTAACCAACGAGA 57.253 32.000 1.21 0.00 0.00 4.04
746 2442 7.136289 TGACCATAAATTTAACCAACGAGAC 57.864 36.000 1.21 0.00 0.00 3.36
747 2443 6.149807 TGACCATAAATTTAACCAACGAGACC 59.850 38.462 1.21 0.00 0.00 3.85
748 2444 6.005198 ACCATAAATTTAACCAACGAGACCA 58.995 36.000 1.21 0.00 0.00 4.02
749 2445 6.490721 ACCATAAATTTAACCAACGAGACCAA 59.509 34.615 1.21 0.00 0.00 3.67
750 2446 7.177744 ACCATAAATTTAACCAACGAGACCAAT 59.822 33.333 1.21 0.00 0.00 3.16
751 2447 8.032451 CCATAAATTTAACCAACGAGACCAATT 58.968 33.333 1.21 0.00 0.00 2.32
752 2448 8.859156 CATAAATTTAACCAACGAGACCAATTG 58.141 33.333 1.21 0.00 0.00 2.32
753 2449 3.907894 TTAACCAACGAGACCAATTGC 57.092 42.857 0.00 0.00 0.00 3.56
754 2450 1.981256 AACCAACGAGACCAATTGCT 58.019 45.000 0.00 0.00 0.00 3.91
755 2451 1.981256 ACCAACGAGACCAATTGCTT 58.019 45.000 0.00 0.00 0.00 3.91
756 2452 1.880027 ACCAACGAGACCAATTGCTTC 59.120 47.619 0.00 0.00 0.00 3.86
757 2453 1.135972 CCAACGAGACCAATTGCTTCG 60.136 52.381 17.34 17.34 0.00 3.79
758 2454 1.798223 CAACGAGACCAATTGCTTCGA 59.202 47.619 22.62 0.00 0.00 3.71
759 2455 1.714794 ACGAGACCAATTGCTTCGAG 58.285 50.000 22.62 12.94 0.00 4.04
760 2456 1.272490 ACGAGACCAATTGCTTCGAGA 59.728 47.619 22.62 0.00 0.00 4.04
761 2457 1.923204 CGAGACCAATTGCTTCGAGAG 59.077 52.381 15.14 0.00 0.00 3.20
762 2458 2.416027 CGAGACCAATTGCTTCGAGAGA 60.416 50.000 15.14 0.00 39.20 3.10
821 2517 9.722056 ACGAATTCACTGATATAATTTTTGCTC 57.278 29.630 6.22 0.00 0.00 4.26
822 2518 9.173939 CGAATTCACTGATATAATTTTTGCTCC 57.826 33.333 6.22 0.00 0.00 4.70
823 2519 9.468532 GAATTCACTGATATAATTTTTGCTCCC 57.531 33.333 0.00 0.00 0.00 4.30
824 2520 6.618287 TCACTGATATAATTTTTGCTCCCG 57.382 37.500 0.00 0.00 0.00 5.14
825 2521 5.008613 TCACTGATATAATTTTTGCTCCCGC 59.991 40.000 0.00 0.00 0.00 6.13
826 2522 4.278419 ACTGATATAATTTTTGCTCCCGCC 59.722 41.667 0.00 0.00 34.43 6.13
827 2523 4.211125 TGATATAATTTTTGCTCCCGCCA 58.789 39.130 0.00 0.00 34.43 5.69
828 2524 2.959507 ATAATTTTTGCTCCCGCCAC 57.040 45.000 0.00 0.00 34.43 5.01
829 2525 1.621992 TAATTTTTGCTCCCGCCACA 58.378 45.000 0.00 0.00 34.43 4.17
830 2526 0.755686 AATTTTTGCTCCCGCCACAA 59.244 45.000 0.00 0.00 34.43 3.33
831 2527 0.975887 ATTTTTGCTCCCGCCACAAT 59.024 45.000 0.00 0.00 34.43 2.71
832 2528 0.316841 TTTTTGCTCCCGCCACAATC 59.683 50.000 0.00 0.00 34.43 2.67
833 2529 1.861542 TTTTGCTCCCGCCACAATCG 61.862 55.000 0.00 0.00 34.43 3.34
834 2530 4.776322 TGCTCCCGCCACAATCGG 62.776 66.667 0.00 0.00 46.05 4.18
835 2531 4.778143 GCTCCCGCCACAATCGGT 62.778 66.667 0.66 0.00 45.09 4.69
836 2532 2.511600 CTCCCGCCACAATCGGTC 60.512 66.667 0.66 0.00 45.09 4.79
837 2533 3.000819 TCCCGCCACAATCGGTCT 61.001 61.111 0.66 0.00 45.09 3.85
838 2534 2.046314 CCCGCCACAATCGGTCTT 60.046 61.111 0.66 0.00 45.09 3.01
839 2535 2.398554 CCCGCCACAATCGGTCTTG 61.399 63.158 0.66 0.00 45.09 3.02
840 2536 2.398554 CCGCCACAATCGGTCTTGG 61.399 63.158 0.00 0.00 41.85 3.61
841 2537 1.671054 CGCCACAATCGGTCTTGGT 60.671 57.895 0.00 0.00 0.00 3.67
842 2538 0.390603 CGCCACAATCGGTCTTGGTA 60.391 55.000 0.00 0.00 0.00 3.25
843 2539 1.369625 GCCACAATCGGTCTTGGTAG 58.630 55.000 0.00 0.00 0.00 3.18
844 2540 1.338769 GCCACAATCGGTCTTGGTAGT 60.339 52.381 0.00 0.00 0.00 2.73
845 2541 2.874457 GCCACAATCGGTCTTGGTAGTT 60.874 50.000 0.00 0.00 0.00 2.24
846 2542 3.618019 GCCACAATCGGTCTTGGTAGTTA 60.618 47.826 0.00 0.00 0.00 2.24
847 2543 4.571919 CCACAATCGGTCTTGGTAGTTAA 58.428 43.478 0.00 0.00 0.00 2.01
848 2544 4.998672 CCACAATCGGTCTTGGTAGTTAAA 59.001 41.667 0.00 0.00 0.00 1.52
849 2545 5.646360 CCACAATCGGTCTTGGTAGTTAAAT 59.354 40.000 0.00 0.00 0.00 1.40
850 2546 6.150474 CCACAATCGGTCTTGGTAGTTAAATT 59.850 38.462 0.00 0.00 0.00 1.82
851 2547 7.308951 CCACAATCGGTCTTGGTAGTTAAATTT 60.309 37.037 0.00 0.00 0.00 1.82
852 2548 8.723311 CACAATCGGTCTTGGTAGTTAAATTTA 58.277 33.333 0.00 0.00 0.00 1.40
853 2549 8.724229 ACAATCGGTCTTGGTAGTTAAATTTAC 58.276 33.333 0.00 0.00 0.00 2.01
854 2550 6.949578 TCGGTCTTGGTAGTTAAATTTACG 57.050 37.500 0.00 0.00 0.00 3.18
855 2551 6.686630 TCGGTCTTGGTAGTTAAATTTACGA 58.313 36.000 0.00 0.00 0.00 3.43
856 2552 7.322664 TCGGTCTTGGTAGTTAAATTTACGAT 58.677 34.615 0.00 0.00 0.00 3.73
857 2553 7.489113 TCGGTCTTGGTAGTTAAATTTACGATC 59.511 37.037 0.00 0.00 0.00 3.69
858 2554 7.276218 CGGTCTTGGTAGTTAAATTTACGATCA 59.724 37.037 0.00 0.00 0.00 2.92
859 2555 8.938906 GGTCTTGGTAGTTAAATTTACGATCAA 58.061 33.333 0.00 2.83 0.00 2.57
871 2567 6.853279 ATTTACGATCAAAATTGAAGCACG 57.147 33.333 0.00 6.83 41.13 5.34
872 2568 5.599359 TTACGATCAAAATTGAAGCACGA 57.401 34.783 15.95 0.00 41.13 4.35
873 2569 4.481930 ACGATCAAAATTGAAGCACGAA 57.518 36.364 15.95 0.00 41.13 3.85
874 2570 4.466828 ACGATCAAAATTGAAGCACGAAG 58.533 39.130 15.95 0.00 41.13 3.79
875 2571 4.213270 ACGATCAAAATTGAAGCACGAAGA 59.787 37.500 15.95 0.00 41.13 2.87
876 2572 5.106555 ACGATCAAAATTGAAGCACGAAGAT 60.107 36.000 15.95 0.00 41.13 2.40
877 2573 6.092122 ACGATCAAAATTGAAGCACGAAGATA 59.908 34.615 15.95 0.00 41.13 1.98
878 2574 6.626488 CGATCAAAATTGAAGCACGAAGATAG 59.374 38.462 0.00 0.00 41.13 2.08
879 2575 7.464577 CGATCAAAATTGAAGCACGAAGATAGA 60.465 37.037 0.00 0.00 41.13 1.98
880 2576 7.065216 TCAAAATTGAAGCACGAAGATAGAG 57.935 36.000 0.00 0.00 33.55 2.43
881 2577 6.092670 TCAAAATTGAAGCACGAAGATAGAGG 59.907 38.462 0.00 0.00 33.55 3.69
882 2578 5.344743 AATTGAAGCACGAAGATAGAGGA 57.655 39.130 0.00 0.00 0.00 3.71
883 2579 4.801330 TTGAAGCACGAAGATAGAGGAA 57.199 40.909 0.00 0.00 0.00 3.36
884 2580 4.801330 TGAAGCACGAAGATAGAGGAAA 57.199 40.909 0.00 0.00 0.00 3.13
885 2581 4.495422 TGAAGCACGAAGATAGAGGAAAC 58.505 43.478 0.00 0.00 0.00 2.78
886 2582 4.021456 TGAAGCACGAAGATAGAGGAAACA 60.021 41.667 0.00 0.00 0.00 2.83
887 2583 3.851098 AGCACGAAGATAGAGGAAACAC 58.149 45.455 0.00 0.00 0.00 3.32
888 2584 3.511934 AGCACGAAGATAGAGGAAACACT 59.488 43.478 0.00 0.00 34.78 3.55
889 2585 4.705507 AGCACGAAGATAGAGGAAACACTA 59.294 41.667 0.00 0.00 37.92 2.74
890 2586 4.799428 GCACGAAGATAGAGGAAACACTAC 59.201 45.833 0.00 0.00 36.31 2.73
891 2587 5.621555 GCACGAAGATAGAGGAAACACTACA 60.622 44.000 0.00 0.00 36.31 2.74
892 2588 6.565234 CACGAAGATAGAGGAAACACTACAT 58.435 40.000 0.00 0.00 36.31 2.29
893 2589 7.036220 CACGAAGATAGAGGAAACACTACATT 58.964 38.462 0.00 0.00 36.31 2.71
894 2590 7.009631 CACGAAGATAGAGGAAACACTACATTG 59.990 40.741 0.00 0.00 36.31 2.82
895 2591 7.036220 CGAAGATAGAGGAAACACTACATTGT 58.964 38.462 0.00 0.00 36.31 2.71
896 2592 8.188799 CGAAGATAGAGGAAACACTACATTGTA 58.811 37.037 0.00 0.00 36.31 2.41
897 2593 9.871238 GAAGATAGAGGAAACACTACATTGTAA 57.129 33.333 0.00 0.00 36.31 2.41
903 2599 9.349713 AGAGGAAACACTACATTGTAAAATTGA 57.650 29.630 0.00 0.00 0.00 2.57
904 2600 9.612620 GAGGAAACACTACATTGTAAAATTGAG 57.387 33.333 0.00 0.00 0.00 3.02
905 2601 8.576442 AGGAAACACTACATTGTAAAATTGAGG 58.424 33.333 0.00 0.00 0.00 3.86
906 2602 8.357402 GGAAACACTACATTGTAAAATTGAGGT 58.643 33.333 0.00 0.00 0.00 3.85
907 2603 9.180678 GAAACACTACATTGTAAAATTGAGGTG 57.819 33.333 0.00 3.12 0.00 4.00
908 2604 6.677913 ACACTACATTGTAAAATTGAGGTGC 58.322 36.000 0.00 0.00 0.00 5.01
909 2605 6.264292 ACACTACATTGTAAAATTGAGGTGCA 59.736 34.615 0.00 0.00 0.00 4.57
910 2606 7.144661 CACTACATTGTAAAATTGAGGTGCAA 58.855 34.615 0.00 0.00 41.53 4.08
912 2608 8.028938 ACTACATTGTAAAATTGAGGTGCAATC 58.971 33.333 0.00 0.00 46.25 2.67
913 2609 6.996509 ACATTGTAAAATTGAGGTGCAATCT 58.003 32.000 0.00 0.00 46.25 2.40
914 2610 7.444299 ACATTGTAAAATTGAGGTGCAATCTT 58.556 30.769 0.00 0.00 46.25 2.40
915 2611 8.584157 ACATTGTAAAATTGAGGTGCAATCTTA 58.416 29.630 0.00 0.00 46.25 2.10
916 2612 9.421806 CATTGTAAAATTGAGGTGCAATCTTAA 57.578 29.630 0.00 0.00 46.25 1.85
917 2613 9.643693 ATTGTAAAATTGAGGTGCAATCTTAAG 57.356 29.630 0.00 0.00 46.25 1.85
918 2614 8.402798 TGTAAAATTGAGGTGCAATCTTAAGA 57.597 30.769 7.82 7.82 46.25 2.10
919 2615 8.855110 TGTAAAATTGAGGTGCAATCTTAAGAA 58.145 29.630 9.71 0.00 46.25 2.52
920 2616 9.691362 GTAAAATTGAGGTGCAATCTTAAGAAA 57.309 29.630 9.71 0.00 46.25 2.52
922 2618 9.612066 AAAATTGAGGTGCAATCTTAAGAAAAA 57.388 25.926 9.71 0.00 46.25 1.94
923 2619 8.822652 AATTGAGGTGCAATCTTAAGAAAAAG 57.177 30.769 9.71 1.18 46.25 2.27
924 2620 6.959639 TGAGGTGCAATCTTAAGAAAAAGT 57.040 33.333 9.71 0.00 0.00 2.66
925 2621 6.970484 TGAGGTGCAATCTTAAGAAAAAGTC 58.030 36.000 9.71 2.05 0.00 3.01
926 2622 6.002062 AGGTGCAATCTTAAGAAAAAGTCG 57.998 37.500 9.71 0.00 0.00 4.18
927 2623 4.617223 GGTGCAATCTTAAGAAAAAGTCGC 59.383 41.667 9.71 5.40 0.00 5.19
928 2624 5.212194 GTGCAATCTTAAGAAAAAGTCGCA 58.788 37.500 9.71 7.77 0.00 5.10
929 2625 5.115622 GTGCAATCTTAAGAAAAAGTCGCAC 59.884 40.000 9.71 14.88 38.47 5.34
930 2626 4.318332 GCAATCTTAAGAAAAAGTCGCACG 59.682 41.667 9.71 0.00 0.00 5.34
931 2627 3.515071 TCTTAAGAAAAAGTCGCACGC 57.485 42.857 1.68 0.00 0.00 5.34
932 2628 2.097104 TCTTAAGAAAAAGTCGCACGCG 60.097 45.455 3.53 3.53 41.35 6.01
933 2629 0.509499 TAAGAAAAAGTCGCACGCGG 59.491 50.000 12.47 0.00 40.25 6.46
934 2630 2.711185 AAGAAAAAGTCGCACGCGGC 62.711 55.000 12.47 8.18 45.28 6.53
959 2655 3.617538 GCGACGCGTGTATCAGCC 61.618 66.667 20.70 0.00 0.00 4.85
977 2673 2.034179 AGCCGGCAAAAACAGAAACTAC 59.966 45.455 31.54 0.00 0.00 2.73
978 2674 2.223618 GCCGGCAAAAACAGAAACTACA 60.224 45.455 24.80 0.00 0.00 2.74
1065 2761 3.082579 GCCATCGGCCGAGAGAAGT 62.083 63.158 33.87 13.01 44.06 3.01
1114 2810 0.534203 GAACACCACGCCCTTCTTCA 60.534 55.000 0.00 0.00 0.00 3.02
1224 2920 2.825836 GGGCGCAAGATCCACCTG 60.826 66.667 10.83 0.00 43.02 4.00
1342 3042 3.574614 TGCTAAAGAATTCGCCTTTTGC 58.425 40.909 14.02 14.02 45.60 3.68
1376 3076 1.076632 TTTTGGTGGTGCCGAGGTT 60.077 52.632 0.00 0.00 41.21 3.50
1384 3084 1.733526 GTGCCGAGGTTGTTGCTTT 59.266 52.632 0.00 0.00 0.00 3.51
1434 3136 4.130286 AGTGAGTTCTGTAGCTTATGGC 57.870 45.455 0.00 0.00 42.19 4.40
1461 3164 2.291217 GGGGTCTTTCTGGCTTGAATCT 60.291 50.000 0.00 0.00 0.00 2.40
1486 3189 6.491745 TCATGCCTTGTGTGTTAAAGGAATTA 59.508 34.615 5.64 0.00 44.93 1.40
1641 3348 6.481954 AGTTGTGTAGAACCGATTTGATTC 57.518 37.500 0.00 0.00 0.00 2.52
1685 3394 2.298446 ACGATATCAGGCATCTCCAGTG 59.702 50.000 3.12 0.00 37.29 3.66
1722 3431 0.401738 TGTAAGCCAAGCTGCCTTCT 59.598 50.000 0.00 0.00 39.62 2.85
1739 3448 0.911769 TCTGCATACCCTCCAACCTG 59.088 55.000 0.00 0.00 0.00 4.00
1787 3496 0.321919 CAGGACTAAGCTTGCAGGCA 60.322 55.000 23.85 1.69 34.17 4.75
1788 3497 0.322008 AGGACTAAGCTTGCAGGCAC 60.322 55.000 23.85 8.27 34.17 5.01
1789 3498 1.639298 GGACTAAGCTTGCAGGCACG 61.639 60.000 23.85 12.46 34.17 5.34
1790 3499 0.951040 GACTAAGCTTGCAGGCACGT 60.951 55.000 23.85 15.58 34.17 4.49
1791 3500 1.230635 ACTAAGCTTGCAGGCACGTG 61.231 55.000 23.85 12.28 34.17 4.49
1866 3597 1.468520 GCGCCTTGCAGAACTATGAAA 59.531 47.619 0.00 0.00 45.45 2.69
2206 3937 2.986728 ACAAACCTCATACCCCTCTGTT 59.013 45.455 0.00 0.00 0.00 3.16
2267 4054 6.906901 TCCAGATAACTCCAACCCTAGTTATT 59.093 38.462 8.63 0.00 44.81 1.40
2274 4061 4.941713 TCCAACCCTAGTTATTTGGCAAT 58.058 39.130 0.00 0.00 38.75 3.56
2276 4063 4.432712 CAACCCTAGTTATTTGGCAATGC 58.567 43.478 0.00 0.00 33.27 3.56
2292 4079 3.119990 GCAATGCATAACGTTGTACACCT 60.120 43.478 11.99 0.00 45.50 4.00
2321 4187 7.834881 TTACTCTCTTCACTCTTCCTGTAAA 57.165 36.000 0.00 0.00 0.00 2.01
2339 4205 7.939039 TCCTGTAAATATTCCCTCTTGCAATAG 59.061 37.037 0.00 1.42 0.00 1.73
2347 4213 4.501071 TCCCTCTTGCAATAGTTCGTTAC 58.499 43.478 10.58 0.00 0.00 2.50
2361 4227 4.077108 GTTCGTTACCCTCCCTTTCAAAT 58.923 43.478 0.00 0.00 0.00 2.32
2377 4243 6.818142 CCTTTCAAATTTCCAGTGTCAAGTTT 59.182 34.615 0.00 0.00 0.00 2.66
2380 4246 6.337356 TCAAATTTCCAGTGTCAAGTTTTCC 58.663 36.000 0.00 0.00 0.00 3.13
2387 4253 2.362077 AGTGTCAAGTTTTCCACATGCC 59.638 45.455 0.00 0.00 0.00 4.40
2388 4254 2.100584 GTGTCAAGTTTTCCACATGCCA 59.899 45.455 0.00 0.00 0.00 4.92
2396 4262 5.192176 AGTTTTCCACATGCCAATGTTTTT 58.808 33.333 0.00 0.00 44.94 1.94
2595 4711 6.879400 ACTTGTCAAGTCTATCCACTATTCC 58.121 40.000 12.62 0.00 37.02 3.01
2679 4795 3.565516 GCGAGGGACATTTGTTTTTCTC 58.434 45.455 0.00 0.00 0.00 2.87
2808 4925 6.377146 ACACTTGAATTGTTTCCAAGTACTGT 59.623 34.615 8.63 2.42 34.42 3.55
2824 4941 3.498774 ACTGTTGGATCTCAGCAAGTT 57.501 42.857 11.04 0.00 36.18 2.66
2901 5018 4.640771 TTGCCTTCTCTGGTACATTCTT 57.359 40.909 0.00 0.00 38.20 2.52
3028 5145 7.606751 GCATGTGCTGTAGGTTTTTCCTAGC 62.607 48.000 0.00 0.00 44.17 3.42
3065 5183 2.609459 CCACGCAAAGACATCATCTACC 59.391 50.000 0.00 0.00 36.27 3.18
3198 5331 9.535878 TTTTTCTTAAACATCGGTGCTTATTTT 57.464 25.926 0.00 0.00 0.00 1.82
3202 5335 9.997482 TCTTAAACATCGGTGCTTATTTTTATC 57.003 29.630 0.00 0.00 0.00 1.75
3215 5348 6.650239 TTATTTTTATCGCACAGACGCTTA 57.350 33.333 0.00 0.00 0.00 3.09
3224 5357 2.893637 CACAGACGCTTACTTAGGCAT 58.106 47.619 0.00 0.00 0.00 4.40
3228 5361 1.852895 GACGCTTACTTAGGCATGTCG 59.147 52.381 0.00 0.00 0.00 4.35
3246 5379 0.667184 CGGCCATGAAAACAAGCACC 60.667 55.000 2.24 0.00 0.00 5.01
3322 5455 4.307432 CATTGTACGTGGTCTCAAAGAGT 58.693 43.478 0.00 0.00 0.00 3.24
3440 5591 1.065053 TCCATTATTGGTGTGTCCCCG 60.065 52.381 3.65 0.00 44.06 5.73
3474 5625 1.978542 CGACACCTCTGAAACTACCG 58.021 55.000 0.00 0.00 0.00 4.02
3489 5640 4.803098 ACTACCGCTTATTCAGTTGTCT 57.197 40.909 0.00 0.00 0.00 3.41
3653 5804 4.637483 ATGTTGATGGCTTTATGGAACG 57.363 40.909 0.00 0.00 0.00 3.95
3654 5805 2.163412 TGTTGATGGCTTTATGGAACGC 59.837 45.455 0.00 0.00 0.00 4.84
3741 5894 4.082679 TGTTGTGTTTGTAGCCGTCTTTTT 60.083 37.500 0.00 0.00 0.00 1.94
3766 5919 4.282957 TGTATGTTTGCATTGTCCATGGTT 59.717 37.500 12.58 0.00 36.58 3.67
3768 5921 1.799994 GTTTGCATTGTCCATGGTTGC 59.200 47.619 12.58 16.35 32.81 4.17
3784 5937 3.631686 TGGTTGCTGTGGTATATTGATGC 59.368 43.478 0.00 0.00 0.00 3.91
3824 5977 2.039216 TGCCTGGAACTTCCGTAAATCA 59.961 45.455 0.00 0.00 40.17 2.57
3846 5999 0.107643 TCACCTCGGTTTGCACATCA 59.892 50.000 0.00 0.00 0.00 3.07
3847 6000 0.518636 CACCTCGGTTTGCACATCAG 59.481 55.000 0.00 0.00 0.00 2.90
3852 6005 3.120199 CCTCGGTTTGCACATCAGTAAAG 60.120 47.826 0.00 0.00 0.00 1.85
3861 6014 7.872163 TTGCACATCAGTAAAGCTAAAATTG 57.128 32.000 0.00 0.00 0.00 2.32
3862 6015 5.863397 TGCACATCAGTAAAGCTAAAATTGC 59.137 36.000 0.00 0.00 0.00 3.56
3863 6016 5.003778 GCACATCAGTAAAGCTAAAATTGCG 59.996 40.000 0.00 0.00 35.28 4.85
3904 6059 7.889873 TCTCATTTTTCTTAGTTGGGTTCAA 57.110 32.000 0.00 0.00 0.00 2.69
3912 6067 2.928416 GTTGGGTTCAACCTCTCCG 58.072 57.895 6.51 0.00 45.50 4.63
3954 6109 4.034510 GTCATGAACTTGGCTATACACTGC 59.965 45.833 0.00 0.00 0.00 4.40
4089 6250 6.245408 TCATACTGGTATCTTTGCCTTTGTT 58.755 36.000 0.00 0.00 0.00 2.83
4218 6379 2.676076 GAGCGGTTTTGGTTAGACGTA 58.324 47.619 0.00 0.00 0.00 3.57
4220 6381 1.124839 GCGGTTTTGGTTAGACGTACG 59.875 52.381 15.01 15.01 0.00 3.67
4234 6395 3.622163 AGACGTACGATCGATCAACTTCT 59.378 43.478 24.34 22.71 34.70 2.85
4300 6461 2.622064 ATCGAAGCACCAGTAATCCC 57.378 50.000 0.00 0.00 0.00 3.85
4311 6472 3.282885 CCAGTAATCCCAGCCTTTTCTC 58.717 50.000 0.00 0.00 0.00 2.87
4383 6548 1.689813 TGTTCTGGAGCGTCAACCTTA 59.310 47.619 0.00 0.00 0.00 2.69
4400 6565 3.989698 TAGCCGCTCACGCTGAAGC 62.990 63.158 0.00 0.00 38.22 3.86
4422 6587 2.579787 CTCGGCCGTCACACGATC 60.580 66.667 27.15 0.00 46.05 3.69
4426 6591 2.509336 GCCGTCACACGATCCCAG 60.509 66.667 0.00 0.00 46.05 4.45
4461 6626 1.471684 CTTGAAATGCTGACCTGAGCC 59.528 52.381 0.00 0.00 38.28 4.70
4462 6627 0.694771 TGAAATGCTGACCTGAGCCT 59.305 50.000 0.00 0.00 38.28 4.58
4464 6629 0.392193 AAATGCTGACCTGAGCCTCG 60.392 55.000 0.00 0.00 38.28 4.63
4465 6630 1.548357 AATGCTGACCTGAGCCTCGT 61.548 55.000 0.00 0.00 38.28 4.18
4466 6631 2.125753 GCTGACCTGAGCCTCGTG 60.126 66.667 0.00 0.00 32.35 4.35
4467 6632 2.640302 GCTGACCTGAGCCTCGTGA 61.640 63.158 0.00 0.00 32.35 4.35
4468 6633 1.510383 CTGACCTGAGCCTCGTGAG 59.490 63.158 0.00 0.00 0.00 3.51
4469 6634 2.183046 GACCTGAGCCTCGTGAGC 59.817 66.667 0.00 0.00 0.00 4.26
4470 6635 2.283532 ACCTGAGCCTCGTGAGCT 60.284 61.111 0.00 0.00 45.23 4.09
4471 6636 2.183811 CCTGAGCCTCGTGAGCTG 59.816 66.667 0.00 0.00 41.75 4.24
4491 6656 4.078516 CCCGTCGTCCCCAGGTTC 62.079 72.222 0.00 0.00 0.00 3.62
4533 6703 2.968156 GTGTGCGTGCCCGTGTTA 60.968 61.111 0.00 0.00 36.15 2.41
4534 6704 2.663520 TGTGCGTGCCCGTGTTAG 60.664 61.111 0.00 0.00 36.15 2.34
4535 6705 2.663852 GTGCGTGCCCGTGTTAGT 60.664 61.111 0.00 0.00 36.15 2.24
4547 6717 1.652588 CGTGTTAGTGTTCGTTGCGTG 60.653 52.381 0.00 0.00 0.00 5.34
4548 6718 0.931702 TGTTAGTGTTCGTTGCGTGG 59.068 50.000 0.00 0.00 0.00 4.94
4549 6719 0.233848 GTTAGTGTTCGTTGCGTGGG 59.766 55.000 0.00 0.00 0.00 4.61
4550 6720 0.104487 TTAGTGTTCGTTGCGTGGGA 59.896 50.000 0.00 0.00 0.00 4.37
4551 6721 0.319211 TAGTGTTCGTTGCGTGGGAG 60.319 55.000 0.00 0.00 0.00 4.30
4552 6722 1.885850 GTGTTCGTTGCGTGGGAGT 60.886 57.895 0.00 0.00 0.00 3.85
4553 6723 1.153329 TGTTCGTTGCGTGGGAGTT 60.153 52.632 0.00 0.00 0.00 3.01
4554 6724 0.745128 TGTTCGTTGCGTGGGAGTTT 60.745 50.000 0.00 0.00 0.00 2.66
4555 6725 0.041576 GTTCGTTGCGTGGGAGTTTC 60.042 55.000 0.00 0.00 0.00 2.78
4557 6727 0.878523 TCGTTGCGTGGGAGTTTCTG 60.879 55.000 0.00 0.00 0.00 3.02
4565 6735 1.661463 TGGGAGTTTCTGCCATCTCT 58.339 50.000 5.92 0.00 46.73 3.10
4567 6737 1.472376 GGGAGTTTCTGCCATCTCTCG 60.472 57.143 2.54 0.00 41.77 4.04
4568 6738 1.285578 GAGTTTCTGCCATCTCTCGC 58.714 55.000 0.00 0.00 0.00 5.03
4569 6739 0.901124 AGTTTCTGCCATCTCTCGCT 59.099 50.000 0.00 0.00 0.00 4.93
4571 6741 0.107993 TTTCTGCCATCTCTCGCTGG 60.108 55.000 0.00 0.00 35.53 4.85
4573 6743 2.685017 TGCCATCTCTCGCTGGGT 60.685 61.111 0.00 0.00 32.90 4.51
4574 6744 2.249413 CTGCCATCTCTCGCTGGGTT 62.249 60.000 0.00 0.00 32.90 4.11
4575 6745 1.522580 GCCATCTCTCGCTGGGTTC 60.523 63.158 0.00 0.00 32.90 3.62
4576 6746 1.900351 CCATCTCTCGCTGGGTTCA 59.100 57.895 0.00 0.00 0.00 3.18
4591 6786 1.541588 GGTTCAGGTTCAGCCATGTTC 59.458 52.381 0.00 0.00 40.61 3.18
4775 6974 3.183775 CAGTAACGCTATATGCCGGTTTC 59.816 47.826 1.90 0.00 38.78 2.78
4776 6975 2.614829 AACGCTATATGCCGGTTTCT 57.385 45.000 1.90 0.00 38.78 2.52
4778 6977 2.480845 ACGCTATATGCCGGTTTCTTC 58.519 47.619 1.90 0.00 38.78 2.87
4779 6978 1.798813 CGCTATATGCCGGTTTCTTCC 59.201 52.381 1.90 0.00 38.78 3.46
4780 6979 2.152016 GCTATATGCCGGTTTCTTCCC 58.848 52.381 1.90 0.00 35.15 3.97
4822 7021 5.858475 CAGTACTGCAATTTCTTTCCTACG 58.142 41.667 10.54 0.00 0.00 3.51
4830 7029 6.183360 TGCAATTTCTTTCCTACGTTTGTCTT 60.183 34.615 0.00 0.00 0.00 3.01
4831 7030 6.359883 GCAATTTCTTTCCTACGTTTGTCTTC 59.640 38.462 0.00 0.00 0.00 2.87
4843 7042 7.697291 CCTACGTTTGTCTTCTAGATGTTCTAC 59.303 40.741 0.00 0.00 0.00 2.59
4863 7063 8.821894 GTTCTACTATGTTCTTAATCCTGCAAG 58.178 37.037 0.00 0.00 0.00 4.01
4898 7098 1.452833 GCCTGGATGTCTCCCTTGC 60.453 63.158 0.00 0.00 41.29 4.01
4901 7101 1.457346 CTGGATGTCTCCCTTGCAAC 58.543 55.000 0.00 0.00 41.29 4.17
4903 7103 0.329596 GGATGTCTCCCTTGCAACCT 59.670 55.000 0.00 0.00 35.28 3.50
4908 7108 2.224523 TGTCTCCCTTGCAACCTGTAAG 60.225 50.000 0.00 0.00 39.36 2.34
4910 7110 2.038557 TCTCCCTTGCAACCTGTAAGAC 59.961 50.000 0.00 0.00 41.68 3.01
4913 7113 1.542547 CCTTGCAACCTGTAAGACGGT 60.543 52.381 0.00 0.00 41.68 4.83
4914 7114 1.531149 CTTGCAACCTGTAAGACGGTG 59.469 52.381 0.00 0.00 41.68 4.94
4915 7115 0.753867 TGCAACCTGTAAGACGGTGA 59.246 50.000 0.00 0.00 34.07 4.02
4917 7117 2.224426 TGCAACCTGTAAGACGGTGAAT 60.224 45.455 0.00 0.00 34.07 2.57
4918 7118 2.812011 GCAACCTGTAAGACGGTGAATT 59.188 45.455 0.00 0.00 34.07 2.17
4919 7119 3.364964 GCAACCTGTAAGACGGTGAATTG 60.365 47.826 0.00 0.00 34.07 2.32
4920 7120 3.764237 ACCTGTAAGACGGTGAATTGT 57.236 42.857 0.00 0.00 34.07 2.71
4921 7121 4.081322 ACCTGTAAGACGGTGAATTGTT 57.919 40.909 0.00 0.00 34.07 2.83
4922 7122 4.062991 ACCTGTAAGACGGTGAATTGTTC 58.937 43.478 0.00 0.00 34.07 3.18
4925 7125 4.312443 TGTAAGACGGTGAATTGTTCCTC 58.688 43.478 0.00 0.00 0.00 3.71
4926 7126 3.771577 AAGACGGTGAATTGTTCCTCT 57.228 42.857 0.00 0.00 0.00 3.69
4932 7132 5.617252 ACGGTGAATTGTTCCTCTTTCTTA 58.383 37.500 0.00 0.00 0.00 2.10
4942 7142 7.523293 TGTTCCTCTTTCTTAATGCAAATGA 57.477 32.000 0.00 0.00 0.00 2.57
4943 7143 7.596494 TGTTCCTCTTTCTTAATGCAAATGAG 58.404 34.615 0.00 0.00 0.00 2.90
4944 7144 7.231317 TGTTCCTCTTTCTTAATGCAAATGAGT 59.769 33.333 0.00 0.00 0.00 3.41
4945 7145 7.765695 TCCTCTTTCTTAATGCAAATGAGTT 57.234 32.000 0.00 0.00 0.00 3.01
4946 7146 8.181904 TCCTCTTTCTTAATGCAAATGAGTTT 57.818 30.769 0.00 0.00 0.00 2.66
4947 7147 8.084073 TCCTCTTTCTTAATGCAAATGAGTTTG 58.916 33.333 0.00 0.00 45.92 2.93
4958 7158 4.847633 CAAATGAGTTTGCTCTTTCGTCA 58.152 39.130 0.00 0.00 42.13 4.35
4959 7159 4.474226 AATGAGTTTGCTCTTTCGTCAC 57.526 40.909 0.00 0.00 42.13 3.67
4960 7160 2.899976 TGAGTTTGCTCTTTCGTCACA 58.100 42.857 0.00 0.00 42.13 3.58
4961 7161 3.266636 TGAGTTTGCTCTTTCGTCACAA 58.733 40.909 0.00 0.00 42.13 3.33
4962 7162 3.876914 TGAGTTTGCTCTTTCGTCACAAT 59.123 39.130 0.00 0.00 42.13 2.71
4963 7163 5.053811 TGAGTTTGCTCTTTCGTCACAATA 58.946 37.500 0.00 0.00 42.13 1.90
4964 7164 5.177511 TGAGTTTGCTCTTTCGTCACAATAG 59.822 40.000 0.00 0.00 42.13 1.73
4965 7165 4.083802 AGTTTGCTCTTTCGTCACAATAGC 60.084 41.667 0.00 0.00 0.00 2.97
4966 7166 3.038788 TGCTCTTTCGTCACAATAGCA 57.961 42.857 0.00 0.00 36.23 3.49
4967 7167 2.995939 TGCTCTTTCGTCACAATAGCAG 59.004 45.455 0.00 0.00 33.84 4.24
4968 7168 2.349886 GCTCTTTCGTCACAATAGCAGG 59.650 50.000 0.00 0.00 0.00 4.85
4969 7169 3.589988 CTCTTTCGTCACAATAGCAGGT 58.410 45.455 0.00 0.00 0.00 4.00
4970 7170 3.997021 CTCTTTCGTCACAATAGCAGGTT 59.003 43.478 0.00 0.00 0.00 3.50
4971 7171 3.745975 TCTTTCGTCACAATAGCAGGTTG 59.254 43.478 0.00 0.00 0.00 3.77
4972 7172 1.438651 TCGTCACAATAGCAGGTTGC 58.561 50.000 0.00 0.00 45.46 4.17
4981 7181 2.047274 GCAGGTTGCGCAGGTAGA 60.047 61.111 11.31 0.00 31.71 2.59
4982 7182 2.391389 GCAGGTTGCGCAGGTAGAC 61.391 63.158 11.31 5.22 31.71 2.59
4983 7183 1.005037 CAGGTTGCGCAGGTAGACA 60.005 57.895 11.31 0.00 0.00 3.41
4984 7184 1.016130 CAGGTTGCGCAGGTAGACAG 61.016 60.000 11.31 0.00 0.00 3.51
4985 7185 1.004918 GGTTGCGCAGGTAGACAGT 60.005 57.895 11.31 0.00 0.00 3.55
4986 7186 1.014564 GGTTGCGCAGGTAGACAGTC 61.015 60.000 11.31 0.00 0.00 3.51
4987 7187 0.038159 GTTGCGCAGGTAGACAGTCT 60.038 55.000 11.31 8.50 0.00 3.24
4988 7188 0.243907 TTGCGCAGGTAGACAGTCTC 59.756 55.000 11.31 0.00 0.00 3.36
4989 7189 1.139947 GCGCAGGTAGACAGTCTCC 59.860 63.158 6.27 8.53 0.00 3.71
4990 7190 1.429825 CGCAGGTAGACAGTCTCCG 59.570 63.158 6.27 6.47 0.00 4.63
4991 7191 1.025113 CGCAGGTAGACAGTCTCCGA 61.025 60.000 6.27 0.00 0.00 4.55
4992 7192 0.452585 GCAGGTAGACAGTCTCCGAC 59.547 60.000 6.27 0.00 0.00 4.79
4993 7193 1.096416 CAGGTAGACAGTCTCCGACC 58.904 60.000 6.27 9.63 32.18 4.79
4994 7194 0.392729 AGGTAGACAGTCTCCGACCG 60.393 60.000 6.27 0.00 32.60 4.79
4995 7195 1.428620 GTAGACAGTCTCCGACCGC 59.571 63.158 6.27 0.00 32.18 5.68
4996 7196 1.025647 GTAGACAGTCTCCGACCGCT 61.026 60.000 6.27 0.00 32.18 5.52
4997 7197 0.322277 TAGACAGTCTCCGACCGCTT 60.322 55.000 6.27 0.00 32.18 4.68
4998 7198 0.322277 AGACAGTCTCCGACCGCTTA 60.322 55.000 0.00 0.00 32.18 3.09
4999 7199 0.739561 GACAGTCTCCGACCGCTTAT 59.260 55.000 0.00 0.00 32.18 1.73
5000 7200 1.945394 GACAGTCTCCGACCGCTTATA 59.055 52.381 0.00 0.00 32.18 0.98
5001 7201 1.948145 ACAGTCTCCGACCGCTTATAG 59.052 52.381 0.00 0.00 32.18 1.31
5002 7202 1.948145 CAGTCTCCGACCGCTTATAGT 59.052 52.381 0.00 0.00 32.18 2.12
5003 7203 2.358267 CAGTCTCCGACCGCTTATAGTT 59.642 50.000 0.00 0.00 32.18 2.24
5004 7204 3.562973 CAGTCTCCGACCGCTTATAGTTA 59.437 47.826 0.00 0.00 32.18 2.24
5005 7205 3.563390 AGTCTCCGACCGCTTATAGTTAC 59.437 47.826 0.00 0.00 32.18 2.50
5006 7206 3.563390 GTCTCCGACCGCTTATAGTTACT 59.437 47.826 0.00 0.00 0.00 2.24
5007 7207 3.812053 TCTCCGACCGCTTATAGTTACTC 59.188 47.826 0.00 0.00 0.00 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.362677 TCCCTAGCTCTTCAACATACCTT 58.637 43.478 0.00 0.00 0.00 3.50
10 11 4.851639 ACAATCCCTAGCTCTTCAACAT 57.148 40.909 0.00 0.00 0.00 2.71
53 54 1.151587 AGTCTGGGGGTGTGGGAAT 60.152 57.895 0.00 0.00 0.00 3.01
56 57 3.330720 GGAGTCTGGGGGTGTGGG 61.331 72.222 0.00 0.00 0.00 4.61
142 143 1.666234 GATCCTCCTTGCGATCGCC 60.666 63.158 35.12 18.76 41.09 5.54
149 150 0.249657 CTACTGCCGATCCTCCTTGC 60.250 60.000 0.00 0.00 0.00 4.01
303 1993 5.466728 TCTGCAGTCTGAATCAACTACAAAC 59.533 40.000 14.67 0.00 0.00 2.93
314 2004 1.002888 CCACCTGTCTGCAGTCTGAAT 59.997 52.381 14.67 1.55 41.02 2.57
450 2145 9.454859 AGAAAATTTAGCTAGACTGTATGCTTT 57.545 29.630 0.00 0.00 37.02 3.51
492 2187 4.133820 TGACCAAATCAAACATGACGACT 58.866 39.130 0.00 0.00 33.02 4.18
529 2224 1.071542 TCACATGACGTGGGATGTGTT 59.928 47.619 22.08 0.00 46.39 3.32
532 2227 2.559698 TTTCACATGACGTGGGATGT 57.440 45.000 0.00 0.00 46.36 3.06
541 2236 9.941664 CCACTTTATTCATCTATTTCACATGAC 57.058 33.333 0.00 0.00 0.00 3.06
626 2322 7.056635 ACTGAGAAAGTTTTTCAGGATCTGAA 58.943 34.615 29.51 6.28 41.51 3.02
627 2323 6.595682 ACTGAGAAAGTTTTTCAGGATCTGA 58.404 36.000 29.51 0.00 41.98 3.27
628 2324 6.874288 ACTGAGAAAGTTTTTCAGGATCTG 57.126 37.500 29.51 12.79 41.98 2.90
671 2367 8.621286 CGCACTATATTTTAAAATGAAGGGAGT 58.379 33.333 21.19 12.23 0.00 3.85
672 2368 8.621286 ACGCACTATATTTTAAAATGAAGGGAG 58.379 33.333 21.19 20.15 0.00 4.30
673 2369 8.514330 ACGCACTATATTTTAAAATGAAGGGA 57.486 30.769 21.19 2.85 0.00 4.20
674 2370 8.621286 AGACGCACTATATTTTAAAATGAAGGG 58.379 33.333 21.19 18.51 0.00 3.95
693 2389 1.429463 CTTGGGAAGTGTAGACGCAC 58.571 55.000 0.00 0.00 39.51 5.34
694 2390 0.320374 CCTTGGGAAGTGTAGACGCA 59.680 55.000 0.00 0.00 0.00 5.24
695 2391 0.320697 ACCTTGGGAAGTGTAGACGC 59.679 55.000 0.00 0.00 0.00 5.19
696 2392 2.036733 TGAACCTTGGGAAGTGTAGACG 59.963 50.000 0.00 0.00 0.00 4.18
697 2393 3.764237 TGAACCTTGGGAAGTGTAGAC 57.236 47.619 0.00 0.00 0.00 2.59
698 2394 3.714798 AGTTGAACCTTGGGAAGTGTAGA 59.285 43.478 0.00 0.00 0.00 2.59
699 2395 4.086706 AGTTGAACCTTGGGAAGTGTAG 57.913 45.455 0.00 0.00 0.00 2.74
700 2396 4.513406 AAGTTGAACCTTGGGAAGTGTA 57.487 40.909 0.00 0.00 0.00 2.90
701 2397 3.382083 AAGTTGAACCTTGGGAAGTGT 57.618 42.857 0.00 0.00 0.00 3.55
702 2398 3.699038 TCAAAGTTGAACCTTGGGAAGTG 59.301 43.478 6.80 0.00 33.55 3.16
703 2399 3.699538 GTCAAAGTTGAACCTTGGGAAGT 59.300 43.478 6.80 0.00 39.21 3.01
704 2400 3.068165 GGTCAAAGTTGAACCTTGGGAAG 59.932 47.826 6.80 0.00 38.96 3.46
705 2401 3.028130 GGTCAAAGTTGAACCTTGGGAA 58.972 45.455 6.80 0.00 38.96 3.97
706 2402 2.024846 TGGTCAAAGTTGAACCTTGGGA 60.025 45.455 6.80 0.00 44.20 4.37
707 2403 2.383855 TGGTCAAAGTTGAACCTTGGG 58.616 47.619 6.80 0.00 44.20 4.12
708 2404 5.782893 TTATGGTCAAAGTTGAACCTTGG 57.217 39.130 6.80 0.00 44.20 3.61
709 2405 8.661352 AAATTTATGGTCAAAGTTGAACCTTG 57.339 30.769 6.62 0.29 44.20 3.61
711 2407 9.758651 GTTAAATTTATGGTCAAAGTTGAACCT 57.241 29.630 6.62 0.00 44.20 3.50
712 2408 8.984764 GGTTAAATTTATGGTCAAAGTTGAACC 58.015 33.333 6.62 6.25 44.20 3.62
713 2409 9.535878 TGGTTAAATTTATGGTCAAAGTTGAAC 57.464 29.630 1.98 1.98 45.04 3.18
715 2411 9.535878 GTTGGTTAAATTTATGGTCAAAGTTGA 57.464 29.630 0.00 0.00 34.20 3.18
716 2412 8.484008 CGTTGGTTAAATTTATGGTCAAAGTTG 58.516 33.333 0.00 0.00 29.44 3.16
717 2413 8.414778 TCGTTGGTTAAATTTATGGTCAAAGTT 58.585 29.630 0.00 0.00 31.36 2.66
718 2414 7.942990 TCGTTGGTTAAATTTATGGTCAAAGT 58.057 30.769 0.00 0.00 0.00 2.66
719 2415 8.293867 TCTCGTTGGTTAAATTTATGGTCAAAG 58.706 33.333 0.00 4.88 0.00 2.77
720 2416 8.077386 GTCTCGTTGGTTAAATTTATGGTCAAA 58.923 33.333 0.00 0.00 0.00 2.69
721 2417 7.308710 GGTCTCGTTGGTTAAATTTATGGTCAA 60.309 37.037 0.00 0.00 0.00 3.18
722 2418 6.149807 GGTCTCGTTGGTTAAATTTATGGTCA 59.850 38.462 0.00 0.00 0.00 4.02
723 2419 6.149807 TGGTCTCGTTGGTTAAATTTATGGTC 59.850 38.462 0.00 0.00 0.00 4.02
724 2420 6.005198 TGGTCTCGTTGGTTAAATTTATGGT 58.995 36.000 0.00 0.00 0.00 3.55
725 2421 6.503589 TGGTCTCGTTGGTTAAATTTATGG 57.496 37.500 0.00 0.00 0.00 2.74
726 2422 8.859156 CAATTGGTCTCGTTGGTTAAATTTATG 58.141 33.333 0.00 0.00 0.00 1.90
727 2423 7.544217 GCAATTGGTCTCGTTGGTTAAATTTAT 59.456 33.333 7.72 0.00 0.00 1.40
728 2424 6.864165 GCAATTGGTCTCGTTGGTTAAATTTA 59.136 34.615 7.72 0.00 0.00 1.40
729 2425 5.694458 GCAATTGGTCTCGTTGGTTAAATTT 59.306 36.000 7.72 0.00 0.00 1.82
730 2426 5.010617 AGCAATTGGTCTCGTTGGTTAAATT 59.989 36.000 3.82 0.00 30.16 1.82
731 2427 4.522789 AGCAATTGGTCTCGTTGGTTAAAT 59.477 37.500 3.82 0.00 30.16 1.40
732 2428 3.886505 AGCAATTGGTCTCGTTGGTTAAA 59.113 39.130 3.82 0.00 30.16 1.52
733 2429 3.482436 AGCAATTGGTCTCGTTGGTTAA 58.518 40.909 3.82 0.00 30.16 2.01
734 2430 3.134574 AGCAATTGGTCTCGTTGGTTA 57.865 42.857 3.82 0.00 30.16 2.85
735 2431 1.981256 AGCAATTGGTCTCGTTGGTT 58.019 45.000 3.82 0.00 30.16 3.67
736 2432 1.880027 GAAGCAATTGGTCTCGTTGGT 59.120 47.619 11.16 0.00 35.32 3.67
737 2433 1.135972 CGAAGCAATTGGTCTCGTTGG 60.136 52.381 22.55 4.65 0.00 3.77
738 2434 1.798223 TCGAAGCAATTGGTCTCGTTG 59.202 47.619 26.18 12.40 32.38 4.10
739 2435 2.069273 CTCGAAGCAATTGGTCTCGTT 58.931 47.619 26.18 9.42 32.38 3.85
740 2436 1.272490 TCTCGAAGCAATTGGTCTCGT 59.728 47.619 26.18 9.72 32.38 4.18
741 2437 1.923204 CTCTCGAAGCAATTGGTCTCG 59.077 52.381 23.79 23.79 0.00 4.04
742 2438 3.238108 TCTCTCGAAGCAATTGGTCTC 57.762 47.619 11.16 9.64 0.00 3.36
743 2439 3.685139 TTCTCTCGAAGCAATTGGTCT 57.315 42.857 11.16 1.36 0.00 3.85
744 2440 4.749245 TTTTCTCTCGAAGCAATTGGTC 57.251 40.909 11.16 4.02 0.00 4.02
795 2491 9.722056 GAGCAAAAATTATATCAGTGAATTCGT 57.278 29.630 0.00 0.00 0.00 3.85
796 2492 9.173939 GGAGCAAAAATTATATCAGTGAATTCG 57.826 33.333 0.00 0.00 0.00 3.34
797 2493 9.468532 GGGAGCAAAAATTATATCAGTGAATTC 57.531 33.333 0.00 0.00 0.00 2.17
798 2494 8.137437 CGGGAGCAAAAATTATATCAGTGAATT 58.863 33.333 0.00 0.00 0.00 2.17
799 2495 7.651808 CGGGAGCAAAAATTATATCAGTGAAT 58.348 34.615 0.00 0.00 0.00 2.57
800 2496 7.026631 CGGGAGCAAAAATTATATCAGTGAA 57.973 36.000 0.00 0.00 0.00 3.18
801 2497 6.618287 CGGGAGCAAAAATTATATCAGTGA 57.382 37.500 0.00 0.00 0.00 3.41
823 2519 0.390603 TACCAAGACCGATTGTGGCG 60.391 55.000 0.00 0.00 34.27 5.69
824 2520 1.338769 ACTACCAAGACCGATTGTGGC 60.339 52.381 0.00 0.00 34.27 5.01
825 2521 2.762535 ACTACCAAGACCGATTGTGG 57.237 50.000 0.00 0.00 37.17 4.17
826 2522 6.737254 ATTTAACTACCAAGACCGATTGTG 57.263 37.500 0.00 0.00 0.00 3.33
827 2523 7.754851 AAATTTAACTACCAAGACCGATTGT 57.245 32.000 0.00 0.00 0.00 2.71
828 2524 7.901377 CGTAAATTTAACTACCAAGACCGATTG 59.099 37.037 0.00 0.00 0.00 2.67
829 2525 7.818930 TCGTAAATTTAACTACCAAGACCGATT 59.181 33.333 0.00 0.00 0.00 3.34
830 2526 7.322664 TCGTAAATTTAACTACCAAGACCGAT 58.677 34.615 0.00 0.00 0.00 4.18
831 2527 6.686630 TCGTAAATTTAACTACCAAGACCGA 58.313 36.000 0.00 0.00 0.00 4.69
832 2528 6.949578 TCGTAAATTTAACTACCAAGACCG 57.050 37.500 0.00 0.00 0.00 4.79
833 2529 8.483307 TGATCGTAAATTTAACTACCAAGACC 57.517 34.615 0.00 0.00 0.00 3.85
845 2541 8.845648 CGTGCTTCAATTTTGATCGTAAATTTA 58.154 29.630 12.93 0.00 37.00 1.40
846 2542 7.593273 TCGTGCTTCAATTTTGATCGTAAATTT 59.407 29.630 12.93 0.00 37.00 1.82
847 2543 7.081349 TCGTGCTTCAATTTTGATCGTAAATT 58.919 30.769 10.79 10.79 37.00 1.82
848 2544 6.607689 TCGTGCTTCAATTTTGATCGTAAAT 58.392 32.000 0.00 1.02 37.00 1.40
849 2545 5.991568 TCGTGCTTCAATTTTGATCGTAAA 58.008 33.333 0.00 0.00 37.00 2.01
850 2546 5.599359 TCGTGCTTCAATTTTGATCGTAA 57.401 34.783 0.00 0.00 37.00 3.18
851 2547 5.407084 TCTTCGTGCTTCAATTTTGATCGTA 59.593 36.000 0.00 0.00 37.00 3.43
852 2548 4.213270 TCTTCGTGCTTCAATTTTGATCGT 59.787 37.500 0.00 0.00 37.00 3.73
853 2549 4.711721 TCTTCGTGCTTCAATTTTGATCG 58.288 39.130 0.00 0.00 37.00 3.69
854 2550 7.688372 TCTATCTTCGTGCTTCAATTTTGATC 58.312 34.615 0.00 0.00 37.00 2.92
855 2551 7.201679 CCTCTATCTTCGTGCTTCAATTTTGAT 60.202 37.037 0.00 0.00 37.00 2.57
856 2552 6.092670 CCTCTATCTTCGTGCTTCAATTTTGA 59.907 38.462 0.00 0.00 34.92 2.69
857 2553 6.092670 TCCTCTATCTTCGTGCTTCAATTTTG 59.907 38.462 0.00 0.00 0.00 2.44
858 2554 6.173339 TCCTCTATCTTCGTGCTTCAATTTT 58.827 36.000 0.00 0.00 0.00 1.82
859 2555 5.734720 TCCTCTATCTTCGTGCTTCAATTT 58.265 37.500 0.00 0.00 0.00 1.82
860 2556 5.344743 TCCTCTATCTTCGTGCTTCAATT 57.655 39.130 0.00 0.00 0.00 2.32
861 2557 5.344743 TTCCTCTATCTTCGTGCTTCAAT 57.655 39.130 0.00 0.00 0.00 2.57
862 2558 4.801330 TTCCTCTATCTTCGTGCTTCAA 57.199 40.909 0.00 0.00 0.00 2.69
863 2559 4.021456 TGTTTCCTCTATCTTCGTGCTTCA 60.021 41.667 0.00 0.00 0.00 3.02
864 2560 4.327627 GTGTTTCCTCTATCTTCGTGCTTC 59.672 45.833 0.00 0.00 0.00 3.86
865 2561 4.021016 AGTGTTTCCTCTATCTTCGTGCTT 60.021 41.667 0.00 0.00 0.00 3.91
866 2562 3.511934 AGTGTTTCCTCTATCTTCGTGCT 59.488 43.478 0.00 0.00 0.00 4.40
867 2563 3.851098 AGTGTTTCCTCTATCTTCGTGC 58.149 45.455 0.00 0.00 0.00 5.34
868 2564 5.950883 TGTAGTGTTTCCTCTATCTTCGTG 58.049 41.667 0.00 0.00 0.00 4.35
869 2565 6.777213 ATGTAGTGTTTCCTCTATCTTCGT 57.223 37.500 0.00 0.00 0.00 3.85
870 2566 7.036220 ACAATGTAGTGTTTCCTCTATCTTCG 58.964 38.462 0.00 0.00 0.00 3.79
871 2567 9.871238 TTACAATGTAGTGTTTCCTCTATCTTC 57.129 33.333 0.00 0.00 32.75 2.87
877 2573 9.349713 TCAATTTTACAATGTAGTGTTTCCTCT 57.650 29.630 0.00 0.00 32.75 3.69
878 2574 9.612620 CTCAATTTTACAATGTAGTGTTTCCTC 57.387 33.333 0.00 0.00 32.75 3.71
879 2575 8.576442 CCTCAATTTTACAATGTAGTGTTTCCT 58.424 33.333 0.00 0.00 32.75 3.36
880 2576 8.357402 ACCTCAATTTTACAATGTAGTGTTTCC 58.643 33.333 0.00 0.00 32.75 3.13
881 2577 9.180678 CACCTCAATTTTACAATGTAGTGTTTC 57.819 33.333 0.00 0.00 32.75 2.78
882 2578 7.651704 GCACCTCAATTTTACAATGTAGTGTTT 59.348 33.333 6.90 0.00 32.75 2.83
883 2579 7.145323 GCACCTCAATTTTACAATGTAGTGTT 58.855 34.615 6.90 0.00 32.75 3.32
884 2580 6.264292 TGCACCTCAATTTTACAATGTAGTGT 59.736 34.615 6.90 0.00 35.43 3.55
885 2581 6.676950 TGCACCTCAATTTTACAATGTAGTG 58.323 36.000 0.00 0.00 0.00 2.74
886 2582 6.892658 TGCACCTCAATTTTACAATGTAGT 57.107 33.333 0.00 0.00 0.00 2.73
887 2583 8.246180 AGATTGCACCTCAATTTTACAATGTAG 58.754 33.333 0.00 0.00 44.95 2.74
888 2584 8.121305 AGATTGCACCTCAATTTTACAATGTA 57.879 30.769 0.00 0.00 44.95 2.29
889 2585 6.996509 AGATTGCACCTCAATTTTACAATGT 58.003 32.000 0.00 0.00 44.95 2.71
890 2586 7.894376 AAGATTGCACCTCAATTTTACAATG 57.106 32.000 0.00 0.00 44.95 2.82
891 2587 9.643693 CTTAAGATTGCACCTCAATTTTACAAT 57.356 29.630 0.00 0.00 44.95 2.71
892 2588 8.855110 TCTTAAGATTGCACCTCAATTTTACAA 58.145 29.630 0.00 0.00 44.95 2.41
893 2589 8.402798 TCTTAAGATTGCACCTCAATTTTACA 57.597 30.769 0.00 0.00 44.95 2.41
894 2590 9.691362 TTTCTTAAGATTGCACCTCAATTTTAC 57.309 29.630 5.89 0.00 44.95 2.01
896 2592 9.612066 TTTTTCTTAAGATTGCACCTCAATTTT 57.388 25.926 5.89 0.00 44.95 1.82
897 2593 9.264719 CTTTTTCTTAAGATTGCACCTCAATTT 57.735 29.630 5.89 0.00 44.95 1.82
898 2594 8.424133 ACTTTTTCTTAAGATTGCACCTCAATT 58.576 29.630 5.89 0.00 44.95 2.32
900 2596 7.346751 ACTTTTTCTTAAGATTGCACCTCAA 57.653 32.000 5.89 0.00 39.32 3.02
901 2597 6.293407 CGACTTTTTCTTAAGATTGCACCTCA 60.293 38.462 5.89 0.00 0.00 3.86
902 2598 6.080406 CGACTTTTTCTTAAGATTGCACCTC 58.920 40.000 5.89 0.00 0.00 3.85
903 2599 5.562890 GCGACTTTTTCTTAAGATTGCACCT 60.563 40.000 5.89 0.00 0.00 4.00
904 2600 4.617223 GCGACTTTTTCTTAAGATTGCACC 59.383 41.667 5.89 0.00 0.00 5.01
905 2601 5.115622 GTGCGACTTTTTCTTAAGATTGCAC 59.884 40.000 23.12 23.12 38.21 4.57
906 2602 5.212194 GTGCGACTTTTTCTTAAGATTGCA 58.788 37.500 12.08 12.08 0.00 4.08
907 2603 4.318332 CGTGCGACTTTTTCTTAAGATTGC 59.682 41.667 5.89 7.12 0.00 3.56
908 2604 4.318332 GCGTGCGACTTTTTCTTAAGATTG 59.682 41.667 5.89 0.00 0.00 2.67
909 2605 4.464112 GCGTGCGACTTTTTCTTAAGATT 58.536 39.130 5.89 0.00 0.00 2.40
910 2606 3.423123 CGCGTGCGACTTTTTCTTAAGAT 60.423 43.478 8.89 0.00 42.83 2.40
911 2607 2.097104 CGCGTGCGACTTTTTCTTAAGA 60.097 45.455 8.89 0.00 42.83 2.10
912 2608 2.222624 CGCGTGCGACTTTTTCTTAAG 58.777 47.619 8.89 0.00 42.83 1.85
913 2609 1.070443 CCGCGTGCGACTTTTTCTTAA 60.070 47.619 16.91 0.00 42.83 1.85
914 2610 0.509499 CCGCGTGCGACTTTTTCTTA 59.491 50.000 16.91 0.00 42.83 2.10
915 2611 1.278637 CCGCGTGCGACTTTTTCTT 59.721 52.632 16.91 0.00 42.83 2.52
916 2612 2.935955 CCGCGTGCGACTTTTTCT 59.064 55.556 16.91 0.00 42.83 2.52
917 2613 2.795389 GCCGCGTGCGACTTTTTC 60.795 61.111 16.91 0.00 42.83 2.29
942 2638 3.617538 GGCTGATACACGCGTCGC 61.618 66.667 9.86 7.29 0.00 5.19
943 2639 3.312504 CGGCTGATACACGCGTCG 61.313 66.667 9.86 8.08 0.00 5.12
944 2640 2.954868 CCGGCTGATACACGCGTC 60.955 66.667 9.86 0.00 0.00 5.19
947 2643 1.917782 TTTTGCCGGCTGATACACGC 61.918 55.000 29.70 0.00 0.00 5.34
948 2644 0.519519 TTTTTGCCGGCTGATACACG 59.480 50.000 29.70 0.00 0.00 4.49
949 2645 1.268352 TGTTTTTGCCGGCTGATACAC 59.732 47.619 29.70 16.42 0.00 2.90
950 2646 1.539388 CTGTTTTTGCCGGCTGATACA 59.461 47.619 29.70 22.85 0.00 2.29
951 2647 1.810151 TCTGTTTTTGCCGGCTGATAC 59.190 47.619 29.70 19.76 0.00 2.24
952 2648 2.192664 TCTGTTTTTGCCGGCTGATA 57.807 45.000 29.70 3.37 0.00 2.15
953 2649 1.327303 TTCTGTTTTTGCCGGCTGAT 58.673 45.000 29.70 0.00 0.00 2.90
954 2650 1.107114 TTTCTGTTTTTGCCGGCTGA 58.893 45.000 29.70 13.94 0.00 4.26
955 2651 1.202405 AGTTTCTGTTTTTGCCGGCTG 60.202 47.619 29.70 8.80 0.00 4.85
956 2652 1.111277 AGTTTCTGTTTTTGCCGGCT 58.889 45.000 29.70 0.00 0.00 5.52
957 2653 2.223618 TGTAGTTTCTGTTTTTGCCGGC 60.224 45.455 22.73 22.73 0.00 6.13
958 2654 3.628017 CTGTAGTTTCTGTTTTTGCCGG 58.372 45.455 0.00 0.00 0.00 6.13
959 2655 3.042887 GCTGTAGTTTCTGTTTTTGCCG 58.957 45.455 0.00 0.00 0.00 5.69
1023 2719 2.619646 GGGTTTGTTCGGAAGCTAAACA 59.380 45.455 18.63 4.59 33.99 2.83
1065 2761 0.757188 GGGCGGATCTCTCAGAGGAA 60.757 60.000 0.57 0.00 0.00 3.36
1095 2791 0.534203 TGAAGAAGGGCGTGGTGTTC 60.534 55.000 0.00 0.00 0.00 3.18
1096 2792 0.110486 ATGAAGAAGGGCGTGGTGTT 59.890 50.000 0.00 0.00 0.00 3.32
1114 2810 5.174395 CGAGATGTTGAACTTTCTGAGGAT 58.826 41.667 6.18 0.00 0.00 3.24
1184 2880 0.929244 CCAGTTCATCCTCCCCCAAT 59.071 55.000 0.00 0.00 0.00 3.16
1224 2920 2.351726 GAGGCCGATGTTGACATTGTAC 59.648 50.000 0.00 3.50 36.57 2.90
1342 3042 3.059188 ACCAAAACGCACTTAAGATGACG 60.059 43.478 10.09 12.81 0.00 4.35
1345 3045 3.004315 ACCACCAAAACGCACTTAAGATG 59.996 43.478 10.09 5.15 0.00 2.90
1351 3051 1.140804 GCACCACCAAAACGCACTT 59.859 52.632 0.00 0.00 0.00 3.16
1376 3076 3.822167 TGCATCAGATTCAGAAAGCAACA 59.178 39.130 6.96 0.00 30.56 3.33
1384 3084 2.995283 CAGGGTTGCATCAGATTCAGA 58.005 47.619 0.00 0.00 0.00 3.27
1434 3136 3.372440 AGCCAGAAAGACCCCTAAATG 57.628 47.619 0.00 0.00 0.00 2.32
1461 3164 3.826524 TCCTTTAACACACAAGGCATGA 58.173 40.909 0.00 0.00 39.69 3.07
1534 3237 5.376625 ACACTAAAGATTTGAGCAACCAGA 58.623 37.500 0.00 0.00 0.00 3.86
1535 3238 5.695851 ACACTAAAGATTTGAGCAACCAG 57.304 39.130 0.00 0.00 0.00 4.00
1536 3239 6.272318 CAAACACTAAAGATTTGAGCAACCA 58.728 36.000 5.92 0.00 35.73 3.67
1537 3240 5.691754 CCAAACACTAAAGATTTGAGCAACC 59.308 40.000 10.86 0.00 35.73 3.77
1538 3241 6.273071 ACCAAACACTAAAGATTTGAGCAAC 58.727 36.000 10.86 0.00 35.73 4.17
1539 3242 6.463995 ACCAAACACTAAAGATTTGAGCAA 57.536 33.333 10.86 0.00 35.73 3.91
1540 3243 7.575414 TTACCAAACACTAAAGATTTGAGCA 57.425 32.000 10.86 0.00 35.73 4.26
1641 3348 3.823873 AGTCTAGAGAATATGCCAGGACG 59.176 47.826 0.00 0.00 0.00 4.79
1722 3431 0.548926 TCCAGGTTGGAGGGTATGCA 60.549 55.000 0.00 0.00 42.67 3.96
1739 3448 4.887655 CCCCTTGGTAGTTGTCAATTATCC 59.112 45.833 0.00 0.00 0.00 2.59
1791 3500 5.875359 ACAGATTTACAGTAAGTGCTAAGGC 59.125 40.000 0.00 0.00 39.26 4.35
1996 3727 6.584488 TGCAGCCAAATAAATTTAGCATGAT 58.416 32.000 3.94 0.00 36.96 2.45
1997 3728 5.975282 TGCAGCCAAATAAATTTAGCATGA 58.025 33.333 3.94 0.00 36.96 3.07
2235 3966 5.893824 GGGTTGGAGTTATCTGGATTCATTT 59.106 40.000 0.00 0.00 0.00 2.32
2236 3967 5.194537 AGGGTTGGAGTTATCTGGATTCATT 59.805 40.000 0.00 0.00 0.00 2.57
2267 4054 3.253432 TGTACAACGTTATGCATTGCCAA 59.747 39.130 3.54 0.00 0.00 4.52
2274 4061 5.502153 AAAAAGGTGTACAACGTTATGCA 57.498 34.783 12.58 0.00 35.86 3.96
2321 4187 5.930135 ACGAACTATTGCAAGAGGGAATAT 58.070 37.500 23.99 0.00 38.83 1.28
2339 4205 2.845363 TGAAAGGGAGGGTAACGAAC 57.155 50.000 0.00 0.00 37.60 3.95
2347 4213 3.259123 CACTGGAAATTTGAAAGGGAGGG 59.741 47.826 0.00 0.00 0.00 4.30
2361 4227 4.082845 TGTGGAAAACTTGACACTGGAAA 58.917 39.130 0.00 0.00 35.02 3.13
2396 4262 3.724508 TTGCATTTTCTGGAAGCGAAA 57.275 38.095 0.00 0.00 30.85 3.46
2400 4266 4.625028 AGTCTTTTGCATTTTCTGGAAGC 58.375 39.130 0.00 0.00 36.47 3.86
2401 4267 6.940714 CAAAGTCTTTTGCATTTTCTGGAAG 58.059 36.000 0.00 0.00 36.47 3.46
2582 4698 4.503991 GCAAGGGAGTGGAATAGTGGATAG 60.504 50.000 0.00 0.00 0.00 2.08
2588 4704 1.561542 CAGGCAAGGGAGTGGAATAGT 59.438 52.381 0.00 0.00 0.00 2.12
2589 4705 1.561542 ACAGGCAAGGGAGTGGAATAG 59.438 52.381 0.00 0.00 0.00 1.73
2590 4706 1.668826 ACAGGCAAGGGAGTGGAATA 58.331 50.000 0.00 0.00 0.00 1.75
2591 4707 1.561542 CTACAGGCAAGGGAGTGGAAT 59.438 52.381 0.00 0.00 0.00 3.01
2592 4708 0.984230 CTACAGGCAAGGGAGTGGAA 59.016 55.000 0.00 0.00 0.00 3.53
2593 4709 0.116342 TCTACAGGCAAGGGAGTGGA 59.884 55.000 0.00 0.00 0.00 4.02
2594 4710 0.984230 TTCTACAGGCAAGGGAGTGG 59.016 55.000 0.00 0.00 0.00 4.00
2595 4711 4.141620 ACATATTCTACAGGCAAGGGAGTG 60.142 45.833 0.00 0.00 0.00 3.51
2679 4795 3.679389 AGTTGCTGACAGAACATAAGGG 58.321 45.455 6.65 0.00 0.00 3.95
2808 4925 6.053632 TCTGAATAACTTGCTGAGATCCAA 57.946 37.500 0.00 0.00 0.00 3.53
2901 5018 2.526888 AGAACCCAGTGAGATACCGA 57.473 50.000 0.00 0.00 0.00 4.69
3028 5145 3.168193 GCGTGGGAATAAAAACATGACG 58.832 45.455 0.00 0.00 0.00 4.35
3065 5183 8.012957 AGGAGAATGATGGTAAGTAGTAAGTG 57.987 38.462 0.00 0.00 0.00 3.16
3198 5331 2.933495 AGTAAGCGTCTGTGCGATAA 57.067 45.000 0.00 0.00 40.67 1.75
3202 5335 1.269166 CCTAAGTAAGCGTCTGTGCG 58.731 55.000 0.00 0.00 40.67 5.34
3224 5357 0.313672 GCTTGTTTTCATGGCCGACA 59.686 50.000 0.00 0.00 0.00 4.35
3228 5361 0.667184 CGGTGCTTGTTTTCATGGCC 60.667 55.000 0.00 0.00 0.00 5.36
3246 5379 2.223711 ACTGGCTTTTGCTTAAACACCG 60.224 45.455 0.00 0.00 46.54 4.94
3360 5493 8.009513 TCCCATGTTCATGGATTTATATTTCCA 58.990 33.333 27.26 6.62 45.69 3.53
3440 5591 2.310577 GTGTCGCAGCATTTTCAGAAC 58.689 47.619 0.00 0.00 0.00 3.01
3511 5662 5.525745 TCAGCTTACATTCAAACGAACAAGA 59.474 36.000 0.00 0.00 0.00 3.02
3514 5665 4.024387 GGTCAGCTTACATTCAAACGAACA 60.024 41.667 0.00 0.00 0.00 3.18
3609 5760 2.162208 TGTGCTTTTGCCTTCGATGATC 59.838 45.455 0.00 0.00 46.87 2.92
3685 5838 5.630264 GTCGTTCCTTTCTAGTTTCTCAGAC 59.370 44.000 0.00 0.00 0.00 3.51
3686 5839 5.535406 AGTCGTTCCTTTCTAGTTTCTCAGA 59.465 40.000 0.00 0.00 0.00 3.27
3741 5894 4.158209 CCATGGACAATGCAAACATACAGA 59.842 41.667 5.56 0.00 34.62 3.41
3766 5919 2.880268 GCAGCATCAATATACCACAGCA 59.120 45.455 0.00 0.00 0.00 4.41
3768 5921 4.383173 TCAGCAGCATCAATATACCACAG 58.617 43.478 0.00 0.00 0.00 3.66
3824 5977 0.107410 TGTGCAAACCGAGGTGACTT 60.107 50.000 0.00 0.00 44.43 3.01
3846 5999 5.699097 TGAACCGCAATTTTAGCTTTACT 57.301 34.783 0.00 0.00 0.00 2.24
3847 6000 5.918576 AGTTGAACCGCAATTTTAGCTTTAC 59.081 36.000 0.00 0.00 39.03 2.01
3852 6005 5.651172 AAAAGTTGAACCGCAATTTTAGC 57.349 34.783 0.00 0.00 43.10 3.09
3861 6014 4.510340 TGAGAAGACTAAAAGTTGAACCGC 59.490 41.667 0.00 0.00 0.00 5.68
3862 6015 6.787085 ATGAGAAGACTAAAAGTTGAACCG 57.213 37.500 0.00 0.00 0.00 4.44
3863 6016 9.803315 AAAAATGAGAAGACTAAAAGTTGAACC 57.197 29.630 0.00 0.00 0.00 3.62
3908 6063 6.994221 ACATCCTCTTACATAATTACCGGAG 58.006 40.000 9.46 0.00 0.00 4.63
3912 6067 9.778741 TTCATGACATCCTCTTACATAATTACC 57.221 33.333 0.00 0.00 0.00 2.85
3954 6109 6.814954 AATACAGAGGGCTATACATATGGG 57.185 41.667 7.80 0.00 0.00 4.00
4040 6200 8.532977 AAATCACGCAAAACTAGCAATAAAAT 57.467 26.923 0.00 0.00 0.00 1.82
4048 6209 5.734498 CAGTATGAAATCACGCAAAACTAGC 59.266 40.000 0.00 0.00 39.69 3.42
4089 6250 2.894765 TCAGTCAGTTTGTCCACGGATA 59.105 45.455 0.00 0.00 0.00 2.59
4122 6283 2.789491 TTGTGCGTTTTCATGCATCA 57.211 40.000 0.00 0.00 46.79 3.07
4123 6284 4.650545 AATTTGTGCGTTTTCATGCATC 57.349 36.364 0.00 0.00 46.79 3.91
4128 6289 8.635877 TTAACAGTAAATTTGTGCGTTTTCAT 57.364 26.923 0.00 0.00 0.00 2.57
4159 6320 9.212641 CTTCTCATTCAGAAAAACTATCAGTCA 57.787 33.333 0.00 0.00 40.83 3.41
4218 6379 2.534298 CAGCAGAAGTTGATCGATCGT 58.466 47.619 20.03 4.99 0.00 3.73
4220 6381 2.606725 CACCAGCAGAAGTTGATCGATC 59.393 50.000 18.72 18.72 0.00 3.69
4234 6395 2.049185 AACGTTGCAACCACCAGCA 61.049 52.632 23.42 0.00 39.32 4.41
4290 6451 3.282885 GAGAAAAGGCTGGGATTACTGG 58.717 50.000 0.00 0.00 0.00 4.00
4300 6461 1.334869 GTGTGTGTGGAGAAAAGGCTG 59.665 52.381 0.00 0.00 0.00 4.85
4311 6472 3.006859 TCTGGATTACTCTGTGTGTGTGG 59.993 47.826 0.00 0.00 0.00 4.17
4497 6662 0.999228 CGGCGTGCTAGAAGCGATAG 60.999 60.000 0.00 0.00 46.26 2.08
4498 6663 1.008881 CGGCGTGCTAGAAGCGATA 60.009 57.895 0.00 0.00 46.26 2.92
4503 6668 3.463505 CACACGGCGTGCTAGAAG 58.536 61.111 37.21 17.44 39.19 2.85
4525 6695 0.233848 GCAACGAACACTAACACGGG 59.766 55.000 0.00 0.00 0.00 5.28
4527 6697 0.573521 ACGCAACGAACACTAACACG 59.426 50.000 0.00 0.00 0.00 4.49
4530 6700 0.233848 CCCACGCAACGAACACTAAC 59.766 55.000 0.00 0.00 0.00 2.34
4531 6701 0.104487 TCCCACGCAACGAACACTAA 59.896 50.000 0.00 0.00 0.00 2.24
4532 6702 0.319211 CTCCCACGCAACGAACACTA 60.319 55.000 0.00 0.00 0.00 2.74
4533 6703 1.594293 CTCCCACGCAACGAACACT 60.594 57.895 0.00 0.00 0.00 3.55
4534 6704 1.433837 AACTCCCACGCAACGAACAC 61.434 55.000 0.00 0.00 0.00 3.32
4535 6705 0.745128 AAACTCCCACGCAACGAACA 60.745 50.000 0.00 0.00 0.00 3.18
4547 6717 1.472376 CGAGAGATGGCAGAAACTCCC 60.472 57.143 0.00 0.00 0.00 4.30
4548 6718 1.933247 CGAGAGATGGCAGAAACTCC 58.067 55.000 0.00 0.00 0.00 3.85
4549 6719 1.134848 AGCGAGAGATGGCAGAAACTC 60.135 52.381 0.00 0.00 0.00 3.01
4550 6720 0.901124 AGCGAGAGATGGCAGAAACT 59.099 50.000 0.00 0.00 0.00 2.66
4551 6721 1.005340 CAGCGAGAGATGGCAGAAAC 58.995 55.000 0.00 0.00 45.32 2.78
4552 6722 3.448267 CAGCGAGAGATGGCAGAAA 57.552 52.632 0.00 0.00 45.32 2.52
4561 6731 0.832135 AACCTGAACCCAGCGAGAGA 60.832 55.000 0.00 0.00 39.07 3.10
4562 6732 0.390472 GAACCTGAACCCAGCGAGAG 60.390 60.000 0.00 0.00 39.07 3.20
4563 6733 1.118965 TGAACCTGAACCCAGCGAGA 61.119 55.000 0.00 0.00 39.07 4.04
4564 6734 0.671781 CTGAACCTGAACCCAGCGAG 60.672 60.000 0.00 0.00 39.07 5.03
4565 6735 1.371183 CTGAACCTGAACCCAGCGA 59.629 57.895 0.00 0.00 39.07 4.93
4567 6737 3.673599 GCTGAACCTGAACCCAGC 58.326 61.111 0.00 0.00 44.00 4.85
4568 6738 0.038744 ATGGCTGAACCTGAACCCAG 59.961 55.000 0.00 0.00 40.22 4.45
4569 6739 0.251297 CATGGCTGAACCTGAACCCA 60.251 55.000 0.00 0.00 40.22 4.51
4571 6741 1.541588 GAACATGGCTGAACCTGAACC 59.458 52.381 0.00 0.00 40.22 3.62
4573 6743 2.957402 AGAACATGGCTGAACCTGAA 57.043 45.000 0.00 0.00 40.22 3.02
4574 6744 2.027192 GGTAGAACATGGCTGAACCTGA 60.027 50.000 0.00 0.00 40.22 3.86
4575 6745 2.026822 AGGTAGAACATGGCTGAACCTG 60.027 50.000 10.03 0.00 40.22 4.00
4576 6746 2.237392 GAGGTAGAACATGGCTGAACCT 59.763 50.000 10.43 10.43 40.22 3.50
4780 6979 1.980772 CTGGAAGCAAAGCAGGGGG 60.981 63.158 0.00 0.00 0.00 5.40
4807 7006 7.639945 AGAAGACAAACGTAGGAAAGAAATTG 58.360 34.615 0.00 0.00 0.00 2.32
4809 7008 8.365647 TCTAGAAGACAAACGTAGGAAAGAAAT 58.634 33.333 0.00 0.00 0.00 2.17
4818 7017 8.452534 AGTAGAACATCTAGAAGACAAACGTAG 58.547 37.037 1.17 0.00 28.01 3.51
4843 7042 6.259608 CACTCCTTGCAGGATTAAGAACATAG 59.740 42.308 0.00 0.00 44.81 2.23
4853 7053 2.957402 TCAACACTCCTTGCAGGATT 57.043 45.000 0.00 0.00 44.81 3.01
4857 7057 4.318332 TGAACTATCAACACTCCTTGCAG 58.682 43.478 0.00 0.00 30.99 4.41
4863 7063 3.265791 CAGGCTGAACTATCAACACTCC 58.734 50.000 9.42 0.00 34.49 3.85
4870 7070 3.378512 AGACATCCAGGCTGAACTATCA 58.621 45.455 17.94 0.00 30.74 2.15
4898 7098 3.813166 ACAATTCACCGTCTTACAGGTTG 59.187 43.478 0.00 0.00 39.00 3.77
4901 7101 3.435671 GGAACAATTCACCGTCTTACAGG 59.564 47.826 0.00 0.00 0.00 4.00
4903 7103 4.039973 AGAGGAACAATTCACCGTCTTACA 59.960 41.667 0.00 0.00 0.00 2.41
4908 7108 4.065789 AGAAAGAGGAACAATTCACCGTC 58.934 43.478 0.00 0.00 0.00 4.79
4910 7110 6.554334 TTAAGAAAGAGGAACAATTCACCG 57.446 37.500 0.00 0.00 0.00 4.94
4913 7113 7.523293 TGCATTAAGAAAGAGGAACAATTCA 57.477 32.000 0.00 0.00 0.00 2.57
4914 7114 8.816640 TTTGCATTAAGAAAGAGGAACAATTC 57.183 30.769 0.00 0.00 0.00 2.17
4915 7115 9.211485 CATTTGCATTAAGAAAGAGGAACAATT 57.789 29.630 0.00 0.00 0.00 2.32
4917 7117 7.950512 TCATTTGCATTAAGAAAGAGGAACAA 58.049 30.769 0.00 0.00 0.00 2.83
4918 7118 7.231317 ACTCATTTGCATTAAGAAAGAGGAACA 59.769 33.333 5.57 0.00 0.00 3.18
4919 7119 7.597386 ACTCATTTGCATTAAGAAAGAGGAAC 58.403 34.615 5.57 0.00 0.00 3.62
4920 7120 7.765695 ACTCATTTGCATTAAGAAAGAGGAA 57.234 32.000 5.57 0.00 0.00 3.36
4921 7121 7.765695 AACTCATTTGCATTAAGAAAGAGGA 57.234 32.000 5.57 0.00 0.00 3.71
4922 7122 8.236084 CAAACTCATTTGCATTAAGAAAGAGG 57.764 34.615 5.57 0.00 38.92 3.69
4942 7142 4.083802 GCTATTGTGACGAAAGAGCAAACT 60.084 41.667 0.00 0.00 40.68 2.66
4943 7143 4.151798 GCTATTGTGACGAAAGAGCAAAC 58.848 43.478 0.00 0.00 40.68 2.93
4944 7144 3.812609 TGCTATTGTGACGAAAGAGCAAA 59.187 39.130 2.97 0.00 45.88 3.68
4945 7145 3.398406 TGCTATTGTGACGAAAGAGCAA 58.602 40.909 2.97 0.00 45.88 3.91
4946 7146 2.995939 CTGCTATTGTGACGAAAGAGCA 59.004 45.455 5.14 5.14 46.47 4.26
4947 7147 2.349886 CCTGCTATTGTGACGAAAGAGC 59.650 50.000 0.00 0.00 41.22 4.09
4948 7148 3.589988 ACCTGCTATTGTGACGAAAGAG 58.410 45.455 0.00 0.00 0.00 2.85
4949 7149 3.678056 ACCTGCTATTGTGACGAAAGA 57.322 42.857 0.00 0.00 0.00 2.52
4950 7150 3.667960 GCAACCTGCTATTGTGACGAAAG 60.668 47.826 0.00 0.00 40.96 2.62
4951 7151 2.225491 GCAACCTGCTATTGTGACGAAA 59.775 45.455 0.00 0.00 40.96 3.46
4952 7152 1.804151 GCAACCTGCTATTGTGACGAA 59.196 47.619 0.00 0.00 40.96 3.85
4953 7153 1.438651 GCAACCTGCTATTGTGACGA 58.561 50.000 0.00 0.00 40.96 4.20
4954 7154 0.095245 CGCAACCTGCTATTGTGACG 59.905 55.000 3.54 0.00 42.25 4.35
4955 7155 0.179189 GCGCAACCTGCTATTGTGAC 60.179 55.000 0.30 2.05 42.25 3.67
4956 7156 0.605050 TGCGCAACCTGCTATTGTGA 60.605 50.000 8.16 0.00 42.25 3.58
4957 7157 0.179181 CTGCGCAACCTGCTATTGTG 60.179 55.000 13.05 4.87 42.25 3.33
4958 7158 1.308069 CCTGCGCAACCTGCTATTGT 61.308 55.000 13.05 0.00 42.25 2.71
4959 7159 1.308069 ACCTGCGCAACCTGCTATTG 61.308 55.000 13.05 0.00 42.25 1.90
4960 7160 0.251916 TACCTGCGCAACCTGCTATT 59.748 50.000 13.05 0.00 42.25 1.73
4961 7161 0.179073 CTACCTGCGCAACCTGCTAT 60.179 55.000 13.05 0.00 42.25 2.97
4962 7162 1.218047 CTACCTGCGCAACCTGCTA 59.782 57.895 13.05 0.00 42.25 3.49
4963 7163 2.046892 CTACCTGCGCAACCTGCT 60.047 61.111 13.05 0.00 42.25 4.24
4964 7164 2.047274 TCTACCTGCGCAACCTGC 60.047 61.111 13.05 0.00 40.69 4.85
4965 7165 1.005037 TGTCTACCTGCGCAACCTG 60.005 57.895 13.05 0.00 0.00 4.00
4966 7166 1.293498 CTGTCTACCTGCGCAACCT 59.707 57.895 13.05 0.00 0.00 3.50
4967 7167 1.004918 ACTGTCTACCTGCGCAACC 60.005 57.895 13.05 0.00 0.00 3.77
4968 7168 0.038159 AGACTGTCTACCTGCGCAAC 60.038 55.000 13.05 6.92 0.00 4.17
4969 7169 0.243907 GAGACTGTCTACCTGCGCAA 59.756 55.000 13.05 0.00 0.00 4.85
4970 7170 1.595993 GGAGACTGTCTACCTGCGCA 61.596 60.000 10.98 10.98 0.00 6.09
4971 7171 1.139947 GGAGACTGTCTACCTGCGC 59.860 63.158 10.86 0.00 0.00 6.09
4972 7172 1.025113 TCGGAGACTGTCTACCTGCG 61.025 60.000 14.28 8.24 41.92 5.18
4973 7173 2.869636 TCGGAGACTGTCTACCTGC 58.130 57.895 14.28 0.00 0.00 4.85
4985 7185 3.812053 GAGTAACTATAAGCGGTCGGAGA 59.188 47.826 0.00 0.00 0.00 3.71
4986 7186 4.144534 GAGTAACTATAAGCGGTCGGAG 57.855 50.000 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.