Multiple sequence alignment - TraesCS2A01G379600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G379600 chr2A 100.000 3984 0 0 1 3984 622701320 622697337 0.000000e+00 7358
1 TraesCS2A01G379600 chr2A 98.596 855 12 0 1 855 77776889 77777743 0.000000e+00 1513
2 TraesCS2A01G379600 chr2A 98.478 854 13 0 1 854 622729356 622730209 0.000000e+00 1506
3 TraesCS2A01G379600 chr2B 93.075 1906 84 21 1464 3333 563030594 563028701 0.000000e+00 2745
4 TraesCS2A01G379600 chr2B 93.182 528 32 2 3289 3812 563028703 563028176 0.000000e+00 773
5 TraesCS2A01G379600 chr2B 97.306 297 8 0 1160 1456 798371643 798371939 4.590000e-139 505
6 TraesCS2A01G379600 chr2B 87.931 174 11 8 3813 3984 769078169 769078004 3.140000e-46 196
7 TraesCS2A01G379600 chr2D 94.577 1420 57 9 2578 3984 480164569 480163157 0.000000e+00 2178
8 TraesCS2A01G379600 chr2D 92.608 974 40 8 1578 2550 480165510 480164568 0.000000e+00 1371
9 TraesCS2A01G379600 chr2D 91.440 514 42 2 1837 2349 651321313 651320801 0.000000e+00 704
10 TraesCS2A01G379600 chr2D 92.988 328 19 3 1160 1485 516860940 516860615 3.600000e-130 475
11 TraesCS2A01G379600 chr2D 89.535 172 10 6 3812 3983 526525122 526524959 1.120000e-50 211
12 TraesCS2A01G379600 chr2D 90.323 124 4 1 1464 1587 480165839 480165724 5.330000e-34 156
13 TraesCS2A01G379600 chr2D 79.293 198 20 8 933 1128 636059507 636059685 6.990000e-23 119
14 TraesCS2A01G379600 chr4A 98.480 855 13 0 1 855 207676552 207675698 0.000000e+00 1507
15 TraesCS2A01G379600 chr4A 96.980 298 8 1 1160 1457 12206906 12206610 2.140000e-137 499
16 TraesCS2A01G379600 chr4A 96.040 303 12 0 1155 1457 629493299 629493601 9.950000e-136 494
17 TraesCS2A01G379600 chr4A 94.551 312 17 0 1158 1469 521958322 521958011 2.150000e-132 483
18 TraesCS2A01G379600 chr7A 98.250 857 15 0 1 857 105854452 105855308 0.000000e+00 1500
19 TraesCS2A01G379600 chr7A 97.693 867 18 2 1 867 601511411 601512275 0.000000e+00 1489
20 TraesCS2A01G379600 chr7A 96.644 298 10 0 1160 1457 709593948 709594245 2.770000e-136 496
21 TraesCS2A01G379600 chr6A 98.246 855 15 0 1 855 9063983 9063129 0.000000e+00 1496
22 TraesCS2A01G379600 chr6A 98.246 855 15 0 1 855 556794500 556793646 0.000000e+00 1496
23 TraesCS2A01G379600 chr6A 96.333 300 11 0 1159 1458 32227880 32228179 9.950000e-136 494
24 TraesCS2A01G379600 chr6A 94.286 140 7 1 3845 3984 5939215 5939077 3.120000e-51 213
25 TraesCS2A01G379600 chr6A 93.571 140 8 1 3845 3984 48520178 48520040 1.450000e-49 207
26 TraesCS2A01G379600 chr6A 91.837 147 11 1 3839 3984 97802542 97802688 1.880000e-48 204
27 TraesCS2A01G379600 chr5A 98.246 855 15 0 1 855 422433295 422432441 0.000000e+00 1496
28 TraesCS2A01G379600 chr5A 88.372 172 12 6 3813 3984 467400017 467400180 2.430000e-47 200
29 TraesCS2A01G379600 chr5A 87.791 172 13 6 3813 3984 567110966 567110803 1.130000e-45 195
30 TraesCS2A01G379600 chr1A 98.246 855 15 0 1 855 593767566 593766712 0.000000e+00 1496
31 TraesCS2A01G379600 chr1A 88.077 520 52 6 1837 2349 525021546 525021030 3.400000e-170 608
32 TraesCS2A01G379600 chr1A 96.667 300 10 0 1158 1457 520860760 520861059 2.140000e-137 499
33 TraesCS2A01G379600 chr3B 97.000 300 9 0 1158 1457 606376054 606376353 4.590000e-139 505
34 TraesCS2A01G379600 chr3B 88.439 173 12 6 3812 3984 428703824 428703660 6.750000e-48 202
35 TraesCS2A01G379600 chr4D 96.377 138 4 1 3847 3984 6660755 6660891 4.010000e-55 226
36 TraesCS2A01G379600 chr5D 89.595 173 15 3 3813 3984 384072188 384072358 2.410000e-52 217
37 TraesCS2A01G379600 chrUn 93.571 140 7 2 3845 3984 85304433 85304296 1.450000e-49 207
38 TraesCS2A01G379600 chrUn 91.429 140 11 1 3845 3984 20113032 20112894 1.460000e-44 191
39 TraesCS2A01G379600 chrUn 85.955 178 13 8 3805 3981 178721373 178721539 3.160000e-41 180
40 TraesCS2A01G379600 chrUn 85.635 181 14 8 3805 3984 196160484 196160315 3.160000e-41 180
41 TraesCS2A01G379600 chrUn 85.955 178 13 8 3805 3981 315744903 315745069 3.160000e-41 180
42 TraesCS2A01G379600 chrUn 85.635 181 14 8 3805 3984 333536961 333536792 3.160000e-41 180
43 TraesCS2A01G379600 chrUn 85.955 178 13 8 3805 3981 366701894 366702060 3.160000e-41 180
44 TraesCS2A01G379600 chrUn 85.955 178 13 8 3805 3981 366733478 366733644 3.160000e-41 180
45 TraesCS2A01G379600 chrUn 86.301 146 17 3 3839 3984 360048171 360048313 5.330000e-34 156
46 TraesCS2A01G379600 chr1D 87.209 172 14 6 3813 3984 96949792 96949629 5.260000e-44 189
47 TraesCS2A01G379600 chr6D 87.943 141 11 6 3845 3984 104342862 104342727 1.150000e-35 161
48 TraesCS2A01G379600 chr7D 79.111 225 23 10 908 1129 529690627 529690830 2.500000e-27 134
49 TraesCS2A01G379600 chr3A 78.061 196 23 7 929 1123 33590242 33590418 5.450000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G379600 chr2A 622697337 622701320 3983 True 7358 7358 100.000000 1 3984 1 chr2A.!!$R1 3983
1 TraesCS2A01G379600 chr2A 77776889 77777743 854 False 1513 1513 98.596000 1 855 1 chr2A.!!$F1 854
2 TraesCS2A01G379600 chr2A 622729356 622730209 853 False 1506 1506 98.478000 1 854 1 chr2A.!!$F2 853
3 TraesCS2A01G379600 chr2B 563028176 563030594 2418 True 1759 2745 93.128500 1464 3812 2 chr2B.!!$R2 2348
4 TraesCS2A01G379600 chr2D 480163157 480165839 2682 True 1235 2178 92.502667 1464 3984 3 chr2D.!!$R4 2520
5 TraesCS2A01G379600 chr2D 651320801 651321313 512 True 704 704 91.440000 1837 2349 1 chr2D.!!$R3 512
6 TraesCS2A01G379600 chr4A 207675698 207676552 854 True 1507 1507 98.480000 1 855 1 chr4A.!!$R2 854
7 TraesCS2A01G379600 chr7A 105854452 105855308 856 False 1500 1500 98.250000 1 857 1 chr7A.!!$F1 856
8 TraesCS2A01G379600 chr7A 601511411 601512275 864 False 1489 1489 97.693000 1 867 1 chr7A.!!$F2 866
9 TraesCS2A01G379600 chr6A 9063129 9063983 854 True 1496 1496 98.246000 1 855 1 chr6A.!!$R2 854
10 TraesCS2A01G379600 chr6A 556793646 556794500 854 True 1496 1496 98.246000 1 855 1 chr6A.!!$R4 854
11 TraesCS2A01G379600 chr5A 422432441 422433295 854 True 1496 1496 98.246000 1 855 1 chr5A.!!$R1 854
12 TraesCS2A01G379600 chr1A 593766712 593767566 854 True 1496 1496 98.246000 1 855 1 chr1A.!!$R2 854
13 TraesCS2A01G379600 chr1A 525021030 525021546 516 True 608 608 88.077000 1837 2349 1 chr1A.!!$R1 512

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
946 947 0.100146 CGTCTAGTAACGGGCAGACC 59.900 60.0 0.00 0.0 38.96 3.85 F
1016 1017 0.033601 ACCAGCCACAAAACCACAGA 60.034 50.0 0.00 0.0 0.00 3.41 F
1232 1233 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.0 0.00 0.0 0.00 4.73 F
1432 1433 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.0 13.26 0.0 46.56 4.01 F
1442 1443 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.0 13.26 0.0 0.00 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2121 2347 0.750546 GCAAGAGATCCATGGCAGCA 60.751 55.000 6.96 0.0 0.00 4.41 R
2169 2395 1.134037 ACCACGTAAAAGCACCAGGAA 60.134 47.619 0.00 0.0 0.00 3.36 R
2606 2841 1.468520 CACACATCCAACCCGACATTC 59.531 52.381 0.00 0.0 0.00 2.67 R
2644 2879 3.005155 AGAAGTCAGGCATTTTTCACTGC 59.995 43.478 0.00 0.0 37.66 4.40 R
3191 3451 3.280295 AGTACCAGTACAGATGGACTCG 58.720 50.000 10.41 0.0 40.51 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 2.510613 TGTAGACATGACCGAGACACA 58.489 47.619 0.00 0.00 0.00 3.72
359 360 1.182385 GCCCAGAGATACCTCTCCGG 61.182 65.000 0.00 0.00 46.38 5.14
422 423 4.389374 CAACATGTACCTTTGGAGACACT 58.611 43.478 0.00 0.00 42.67 3.55
480 481 3.533547 ACGTTTGGTAGCACACAAAGTA 58.466 40.909 11.43 0.00 37.27 2.24
489 490 1.130561 GCACACAAAGTATTCCTCCGC 59.869 52.381 0.00 0.00 0.00 5.54
857 858 5.165652 TCTAGGGCATATTTCCTTCAGGAT 58.834 41.667 0.00 0.00 44.98 3.24
859 860 5.930209 AGGGCATATTTCCTTCAGGATTA 57.070 39.130 0.00 0.00 44.98 1.75
860 861 5.635120 AGGGCATATTTCCTTCAGGATTAC 58.365 41.667 0.00 0.00 44.98 1.89
861 862 5.134339 AGGGCATATTTCCTTCAGGATTACA 59.866 40.000 0.00 0.00 44.98 2.41
863 864 6.064717 GGCATATTTCCTTCAGGATTACAGT 58.935 40.000 0.00 0.00 44.98 3.55
864 865 6.016777 GGCATATTTCCTTCAGGATTACAGTG 60.017 42.308 0.00 0.00 44.98 3.66
865 866 6.543831 GCATATTTCCTTCAGGATTACAGTGT 59.456 38.462 0.00 0.00 44.98 3.55
866 867 7.715249 GCATATTTCCTTCAGGATTACAGTGTA 59.285 37.037 0.00 0.00 44.98 2.90
867 868 9.784531 CATATTTCCTTCAGGATTACAGTGTAT 57.215 33.333 3.28 0.00 44.98 2.29
870 871 8.934023 TTTCCTTCAGGATTACAGTGTATTTT 57.066 30.769 3.28 0.00 44.98 1.82
871 872 8.561738 TTCCTTCAGGATTACAGTGTATTTTC 57.438 34.615 3.28 2.26 44.98 2.29
872 873 7.110155 TCCTTCAGGATTACAGTGTATTTTCC 58.890 38.462 3.28 10.82 39.78 3.13
873 874 7.037586 TCCTTCAGGATTACAGTGTATTTTCCT 60.038 37.037 17.82 17.82 39.78 3.36
874 875 8.265055 CCTTCAGGATTACAGTGTATTTTCCTA 58.735 37.037 20.88 11.57 37.39 2.94
875 876 9.838339 CTTCAGGATTACAGTGTATTTTCCTAT 57.162 33.333 20.88 5.64 31.11 2.57
883 884 9.590451 TTACAGTGTATTTTCCTATAAACGGAG 57.410 33.333 3.28 0.00 0.00 4.63
884 885 7.046033 ACAGTGTATTTTCCTATAAACGGAGG 58.954 38.462 0.00 0.00 0.00 4.30
885 886 6.482308 CAGTGTATTTTCCTATAAACGGAGGG 59.518 42.308 0.00 0.00 33.27 4.30
886 887 6.384886 AGTGTATTTTCCTATAAACGGAGGGA 59.615 38.462 0.00 0.00 33.27 4.20
887 888 6.704937 GTGTATTTTCCTATAAACGGAGGGAG 59.295 42.308 0.00 0.00 33.27 4.30
888 889 6.612456 TGTATTTTCCTATAAACGGAGGGAGA 59.388 38.462 0.00 0.00 33.27 3.71
889 890 6.570654 ATTTTCCTATAAACGGAGGGAGAA 57.429 37.500 0.00 0.00 33.27 2.87
890 891 6.377245 TTTTCCTATAAACGGAGGGAGAAA 57.623 37.500 0.00 0.00 33.27 2.52
891 892 5.609533 TTCCTATAAACGGAGGGAGAAAG 57.390 43.478 0.00 0.00 33.27 2.62
892 893 3.965347 TCCTATAAACGGAGGGAGAAAGG 59.035 47.826 0.00 0.00 33.27 3.11
893 894 3.965347 CCTATAAACGGAGGGAGAAAGGA 59.035 47.826 0.00 0.00 0.00 3.36
894 895 4.407945 CCTATAAACGGAGGGAGAAAGGAA 59.592 45.833 0.00 0.00 0.00 3.36
895 896 4.921644 ATAAACGGAGGGAGAAAGGAAA 57.078 40.909 0.00 0.00 0.00 3.13
896 897 3.588210 AAACGGAGGGAGAAAGGAAAA 57.412 42.857 0.00 0.00 0.00 2.29
897 898 2.861147 ACGGAGGGAGAAAGGAAAAG 57.139 50.000 0.00 0.00 0.00 2.27
898 899 2.335933 ACGGAGGGAGAAAGGAAAAGA 58.664 47.619 0.00 0.00 0.00 2.52
899 900 2.303311 ACGGAGGGAGAAAGGAAAAGAG 59.697 50.000 0.00 0.00 0.00 2.85
900 901 2.355209 CGGAGGGAGAAAGGAAAAGAGG 60.355 54.545 0.00 0.00 0.00 3.69
901 902 2.025793 GGAGGGAGAAAGGAAAAGAGGG 60.026 54.545 0.00 0.00 0.00 4.30
902 903 2.913617 GAGGGAGAAAGGAAAAGAGGGA 59.086 50.000 0.00 0.00 0.00 4.20
903 904 2.916269 AGGGAGAAAGGAAAAGAGGGAG 59.084 50.000 0.00 0.00 0.00 4.30
904 905 2.913617 GGGAGAAAGGAAAAGAGGGAGA 59.086 50.000 0.00 0.00 0.00 3.71
905 906 3.330998 GGGAGAAAGGAAAAGAGGGAGAA 59.669 47.826 0.00 0.00 0.00 2.87
906 907 4.202577 GGGAGAAAGGAAAAGAGGGAGAAA 60.203 45.833 0.00 0.00 0.00 2.52
907 908 5.007034 GGAGAAAGGAAAAGAGGGAGAAAG 58.993 45.833 0.00 0.00 0.00 2.62
908 909 4.991776 AGAAAGGAAAAGAGGGAGAAAGG 58.008 43.478 0.00 0.00 0.00 3.11
909 910 4.665483 AGAAAGGAAAAGAGGGAGAAAGGA 59.335 41.667 0.00 0.00 0.00 3.36
910 911 5.134509 AGAAAGGAAAAGAGGGAGAAAGGAA 59.865 40.000 0.00 0.00 0.00 3.36
911 912 5.403558 AAGGAAAAGAGGGAGAAAGGAAA 57.596 39.130 0.00 0.00 0.00 3.13
912 913 5.403558 AGGAAAAGAGGGAGAAAGGAAAA 57.596 39.130 0.00 0.00 0.00 2.29
913 914 5.389520 AGGAAAAGAGGGAGAAAGGAAAAG 58.610 41.667 0.00 0.00 0.00 2.27
914 915 5.134509 AGGAAAAGAGGGAGAAAGGAAAAGA 59.865 40.000 0.00 0.00 0.00 2.52
915 916 5.833667 GGAAAAGAGGGAGAAAGGAAAAGAA 59.166 40.000 0.00 0.00 0.00 2.52
916 917 6.323996 GGAAAAGAGGGAGAAAGGAAAAGAAA 59.676 38.462 0.00 0.00 0.00 2.52
917 918 7.147724 GGAAAAGAGGGAGAAAGGAAAAGAAAA 60.148 37.037 0.00 0.00 0.00 2.29
918 919 7.733773 AAAGAGGGAGAAAGGAAAAGAAAAA 57.266 32.000 0.00 0.00 0.00 1.94
939 940 2.253392 AAACGAGCGTCTAGTAACGG 57.747 50.000 6.16 0.00 42.81 4.44
940 941 0.449388 AACGAGCGTCTAGTAACGGG 59.551 55.000 6.16 0.00 42.81 5.28
941 942 1.298190 CGAGCGTCTAGTAACGGGC 60.298 63.158 6.16 0.00 42.81 6.13
942 943 1.805254 GAGCGTCTAGTAACGGGCA 59.195 57.895 6.16 0.00 42.81 5.36
943 944 0.248539 GAGCGTCTAGTAACGGGCAG 60.249 60.000 6.16 0.00 42.81 4.85
944 945 0.679002 AGCGTCTAGTAACGGGCAGA 60.679 55.000 6.16 0.00 42.81 4.26
945 946 0.525029 GCGTCTAGTAACGGGCAGAC 60.525 60.000 6.16 0.00 42.81 3.51
946 947 0.100146 CGTCTAGTAACGGGCAGACC 59.900 60.000 0.00 0.00 38.96 3.85
957 958 2.390427 GGCAGACCCGATAAAACCG 58.610 57.895 0.00 0.00 0.00 4.44
958 959 1.712018 GGCAGACCCGATAAAACCGC 61.712 60.000 0.00 0.00 0.00 5.68
959 960 2.003672 CAGACCCGATAAAACCGCG 58.996 57.895 0.00 0.00 0.00 6.46
960 961 1.812507 AGACCCGATAAAACCGCGC 60.813 57.895 0.00 0.00 0.00 6.86
961 962 2.816360 GACCCGATAAAACCGCGCC 61.816 63.158 0.00 0.00 0.00 6.53
962 963 3.579232 CCCGATAAAACCGCGCCC 61.579 66.667 0.00 0.00 0.00 6.13
963 964 2.820479 CCGATAAAACCGCGCCCA 60.820 61.111 0.00 0.00 0.00 5.36
964 965 2.400158 CCGATAAAACCGCGCCCAA 61.400 57.895 0.00 0.00 0.00 4.12
965 966 1.226184 CGATAAAACCGCGCCCAAC 60.226 57.895 0.00 0.00 0.00 3.77
966 967 1.877367 GATAAAACCGCGCCCAACA 59.123 52.632 0.00 0.00 0.00 3.33
967 968 0.241481 GATAAAACCGCGCCCAACAA 59.759 50.000 0.00 0.00 0.00 2.83
968 969 0.674534 ATAAAACCGCGCCCAACAAA 59.325 45.000 0.00 0.00 0.00 2.83
969 970 0.458669 TAAAACCGCGCCCAACAAAA 59.541 45.000 0.00 0.00 0.00 2.44
970 971 0.179070 AAAACCGCGCCCAACAAAAT 60.179 45.000 0.00 0.00 0.00 1.82
971 972 0.674534 AAACCGCGCCCAACAAAATA 59.325 45.000 0.00 0.00 0.00 1.40
972 973 0.674534 AACCGCGCCCAACAAAATAA 59.325 45.000 0.00 0.00 0.00 1.40
973 974 0.674534 ACCGCGCCCAACAAAATAAA 59.325 45.000 0.00 0.00 0.00 1.40
974 975 1.068741 ACCGCGCCCAACAAAATAAAA 59.931 42.857 0.00 0.00 0.00 1.52
975 976 1.457683 CCGCGCCCAACAAAATAAAAC 59.542 47.619 0.00 0.00 0.00 2.43
976 977 1.457683 CGCGCCCAACAAAATAAAACC 59.542 47.619 0.00 0.00 0.00 3.27
977 978 1.457683 GCGCCCAACAAAATAAAACCG 59.542 47.619 0.00 0.00 0.00 4.44
978 979 2.862921 GCGCCCAACAAAATAAAACCGA 60.863 45.455 0.00 0.00 0.00 4.69
979 980 3.381949 CGCCCAACAAAATAAAACCGAA 58.618 40.909 0.00 0.00 0.00 4.30
980 981 3.182772 CGCCCAACAAAATAAAACCGAAC 59.817 43.478 0.00 0.00 0.00 3.95
981 982 3.495377 GCCCAACAAAATAAAACCGAACC 59.505 43.478 0.00 0.00 0.00 3.62
982 983 4.059511 CCCAACAAAATAAAACCGAACCC 58.940 43.478 0.00 0.00 0.00 4.11
983 984 3.736759 CCAACAAAATAAAACCGAACCCG 59.263 43.478 0.00 0.00 0.00 5.28
994 995 3.009612 CGAACCCGGTTCAAAAGGA 57.990 52.632 26.39 0.00 42.05 3.36
995 996 0.589708 CGAACCCGGTTCAAAAGGAC 59.410 55.000 26.39 1.69 42.05 3.85
996 997 1.682740 GAACCCGGTTCAAAAGGACA 58.317 50.000 23.14 0.00 41.62 4.02
997 998 2.025898 GAACCCGGTTCAAAAGGACAA 58.974 47.619 23.14 0.00 41.62 3.18
998 999 1.395635 ACCCGGTTCAAAAGGACAAC 58.604 50.000 0.00 0.00 0.00 3.32
999 1000 0.671796 CCCGGTTCAAAAGGACAACC 59.328 55.000 0.00 0.00 36.91 3.77
1000 1001 1.394618 CCGGTTCAAAAGGACAACCA 58.605 50.000 0.00 0.00 39.79 3.67
1001 1002 1.336755 CCGGTTCAAAAGGACAACCAG 59.663 52.381 0.00 0.00 39.79 4.00
1002 1003 1.269051 CGGTTCAAAAGGACAACCAGC 60.269 52.381 0.00 0.00 39.79 4.85
1003 1004 1.068588 GGTTCAAAAGGACAACCAGCC 59.931 52.381 0.00 0.00 39.61 4.85
1004 1005 1.754226 GTTCAAAAGGACAACCAGCCA 59.246 47.619 0.00 0.00 38.94 4.75
1005 1006 1.398692 TCAAAAGGACAACCAGCCAC 58.601 50.000 0.00 0.00 38.94 5.01
1006 1007 1.110442 CAAAAGGACAACCAGCCACA 58.890 50.000 0.00 0.00 38.94 4.17
1007 1008 1.480137 CAAAAGGACAACCAGCCACAA 59.520 47.619 0.00 0.00 38.94 3.33
1008 1009 1.859302 AAAGGACAACCAGCCACAAA 58.141 45.000 0.00 0.00 38.94 2.83
1009 1010 1.859302 AAGGACAACCAGCCACAAAA 58.141 45.000 0.00 0.00 38.94 2.44
1010 1011 1.111277 AGGACAACCAGCCACAAAAC 58.889 50.000 0.00 0.00 38.94 2.43
1011 1012 0.104120 GGACAACCAGCCACAAAACC 59.896 55.000 0.00 0.00 35.97 3.27
1012 1013 0.820871 GACAACCAGCCACAAAACCA 59.179 50.000 0.00 0.00 0.00 3.67
1013 1014 0.534873 ACAACCAGCCACAAAACCAC 59.465 50.000 0.00 0.00 0.00 4.16
1014 1015 0.534412 CAACCAGCCACAAAACCACA 59.466 50.000 0.00 0.00 0.00 4.17
1015 1016 0.823460 AACCAGCCACAAAACCACAG 59.177 50.000 0.00 0.00 0.00 3.66
1016 1017 0.033601 ACCAGCCACAAAACCACAGA 60.034 50.000 0.00 0.00 0.00 3.41
1017 1018 1.331214 CCAGCCACAAAACCACAGAT 58.669 50.000 0.00 0.00 0.00 2.90
1018 1019 1.270550 CCAGCCACAAAACCACAGATC 59.729 52.381 0.00 0.00 0.00 2.75
1019 1020 2.233271 CAGCCACAAAACCACAGATCT 58.767 47.619 0.00 0.00 0.00 2.75
1020 1021 2.624838 CAGCCACAAAACCACAGATCTT 59.375 45.455 0.00 0.00 0.00 2.40
1021 1022 3.820467 CAGCCACAAAACCACAGATCTTA 59.180 43.478 0.00 0.00 0.00 2.10
1022 1023 4.074970 AGCCACAAAACCACAGATCTTAG 58.925 43.478 0.00 0.00 0.00 2.18
1023 1024 3.366374 GCCACAAAACCACAGATCTTAGC 60.366 47.826 0.00 0.00 0.00 3.09
1024 1025 3.120199 CCACAAAACCACAGATCTTAGCG 60.120 47.826 0.00 0.00 0.00 4.26
1025 1026 3.498397 CACAAAACCACAGATCTTAGCGT 59.502 43.478 0.00 0.00 0.00 5.07
1026 1027 3.498397 ACAAAACCACAGATCTTAGCGTG 59.502 43.478 0.00 0.00 0.00 5.34
1027 1028 3.678056 AAACCACAGATCTTAGCGTGA 57.322 42.857 11.46 0.00 0.00 4.35
1028 1029 3.678056 AACCACAGATCTTAGCGTGAA 57.322 42.857 11.46 0.00 0.00 3.18
1029 1030 3.895232 ACCACAGATCTTAGCGTGAAT 57.105 42.857 11.46 0.00 0.00 2.57
1030 1031 4.207891 ACCACAGATCTTAGCGTGAATT 57.792 40.909 11.46 0.00 0.00 2.17
1031 1032 5.339008 ACCACAGATCTTAGCGTGAATTA 57.661 39.130 11.46 0.00 0.00 1.40
1032 1033 5.109903 ACCACAGATCTTAGCGTGAATTAC 58.890 41.667 11.46 0.00 0.00 1.89
1033 1034 5.109210 CCACAGATCTTAGCGTGAATTACA 58.891 41.667 11.46 0.00 0.00 2.41
1034 1035 5.755375 CCACAGATCTTAGCGTGAATTACAT 59.245 40.000 11.46 0.00 0.00 2.29
1035 1036 6.074088 CCACAGATCTTAGCGTGAATTACATC 60.074 42.308 11.46 0.00 0.00 3.06
1036 1037 5.687730 ACAGATCTTAGCGTGAATTACATCG 59.312 40.000 0.00 0.00 0.00 3.84
1037 1038 4.681942 AGATCTTAGCGTGAATTACATCGC 59.318 41.667 0.00 0.00 43.54 4.58
1040 1041 4.454183 CGTGAATTACATCGCGCG 57.546 55.556 26.76 26.76 44.98 6.86
1041 1042 1.914389 CGTGAATTACATCGCGCGA 59.086 52.632 36.65 36.65 44.98 5.87
1042 1043 0.502695 CGTGAATTACATCGCGCGAT 59.497 50.000 37.68 37.68 44.98 4.58
1043 1044 1.458665 CGTGAATTACATCGCGCGATC 60.459 52.381 40.03 28.77 44.98 3.69
1044 1045 0.775861 TGAATTACATCGCGCGATCG 59.224 50.000 40.03 33.08 39.07 3.69
1045 1046 0.091344 GAATTACATCGCGCGATCGG 59.909 55.000 40.03 31.09 35.95 4.18
1046 1047 0.318360 AATTACATCGCGCGATCGGA 60.318 50.000 40.03 28.29 35.95 4.55
1047 1048 1.002250 ATTACATCGCGCGATCGGAC 61.002 55.000 40.03 0.00 35.95 4.79
1048 1049 3.850092 TACATCGCGCGATCGGACG 62.850 63.158 40.03 29.69 35.95 4.79
1055 1056 4.508128 GCGATCGGACGGCCAAGA 62.508 66.667 18.30 0.00 0.00 3.02
1056 1057 2.278857 CGATCGGACGGCCAAGAG 60.279 66.667 8.76 0.00 0.00 2.85
1057 1058 2.893398 GATCGGACGGCCAAGAGT 59.107 61.111 8.76 0.00 0.00 3.24
1058 1059 1.218316 GATCGGACGGCCAAGAGTT 59.782 57.895 8.76 0.00 0.00 3.01
1059 1060 0.391263 GATCGGACGGCCAAGAGTTT 60.391 55.000 8.76 0.00 0.00 2.66
1060 1061 0.673644 ATCGGACGGCCAAGAGTTTG 60.674 55.000 8.76 0.00 0.00 2.93
1061 1062 1.301401 CGGACGGCCAAGAGTTTGA 60.301 57.895 8.76 0.00 36.36 2.69
1062 1063 0.882927 CGGACGGCCAAGAGTTTGAA 60.883 55.000 8.76 0.00 36.36 2.69
1063 1064 1.534729 GGACGGCCAAGAGTTTGAAT 58.465 50.000 0.00 0.00 36.36 2.57
1064 1065 1.200020 GGACGGCCAAGAGTTTGAATG 59.800 52.381 0.00 0.00 36.36 2.67
1065 1066 2.151202 GACGGCCAAGAGTTTGAATGA 58.849 47.619 2.24 0.00 36.36 2.57
1066 1067 2.749621 GACGGCCAAGAGTTTGAATGAT 59.250 45.455 2.24 0.00 36.36 2.45
1067 1068 3.938963 GACGGCCAAGAGTTTGAATGATA 59.061 43.478 2.24 0.00 36.36 2.15
1068 1069 4.331968 ACGGCCAAGAGTTTGAATGATAA 58.668 39.130 2.24 0.00 36.36 1.75
1069 1070 4.396166 ACGGCCAAGAGTTTGAATGATAAG 59.604 41.667 2.24 0.00 36.36 1.73
1070 1071 4.635765 CGGCCAAGAGTTTGAATGATAAGA 59.364 41.667 2.24 0.00 36.36 2.10
1071 1072 5.123820 CGGCCAAGAGTTTGAATGATAAGAA 59.876 40.000 2.24 0.00 36.36 2.52
1072 1073 6.183360 CGGCCAAGAGTTTGAATGATAAGAAT 60.183 38.462 2.24 0.00 36.36 2.40
1073 1074 7.550712 GGCCAAGAGTTTGAATGATAAGAATT 58.449 34.615 0.00 0.00 36.36 2.17
1074 1075 8.037166 GGCCAAGAGTTTGAATGATAAGAATTT 58.963 33.333 0.00 0.00 36.36 1.82
1075 1076 8.866956 GCCAAGAGTTTGAATGATAAGAATTTG 58.133 33.333 0.00 0.00 36.36 2.32
1084 1085 9.577110 TTGAATGATAAGAATTTGAATGACAGC 57.423 29.630 0.00 0.00 0.00 4.40
1085 1086 8.192774 TGAATGATAAGAATTTGAATGACAGCC 58.807 33.333 0.00 0.00 0.00 4.85
1086 1087 7.649533 ATGATAAGAATTTGAATGACAGCCA 57.350 32.000 0.00 0.00 0.00 4.75
1087 1088 7.465353 TGATAAGAATTTGAATGACAGCCAA 57.535 32.000 0.00 0.00 0.00 4.52
1088 1089 8.070034 TGATAAGAATTTGAATGACAGCCAAT 57.930 30.769 0.00 0.00 0.00 3.16
1089 1090 8.533657 TGATAAGAATTTGAATGACAGCCAATT 58.466 29.630 0.00 0.00 0.00 2.32
1090 1091 8.712285 ATAAGAATTTGAATGACAGCCAATTG 57.288 30.769 0.00 0.00 0.00 2.32
1091 1092 6.349243 AGAATTTGAATGACAGCCAATTGA 57.651 33.333 7.12 0.00 0.00 2.57
1092 1093 6.761312 AGAATTTGAATGACAGCCAATTGAA 58.239 32.000 7.12 0.00 0.00 2.69
1093 1094 7.218614 AGAATTTGAATGACAGCCAATTGAAA 58.781 30.769 7.12 0.00 0.00 2.69
1094 1095 7.716123 AGAATTTGAATGACAGCCAATTGAAAA 59.284 29.630 7.12 0.00 0.00 2.29
1095 1096 7.989416 ATTTGAATGACAGCCAATTGAAAAT 57.011 28.000 7.12 0.00 0.00 1.82
1096 1097 7.424227 TTTGAATGACAGCCAATTGAAAATC 57.576 32.000 7.12 0.07 0.00 2.17
1097 1098 6.099159 TGAATGACAGCCAATTGAAAATCA 57.901 33.333 7.12 5.99 0.00 2.57
1098 1099 5.927689 TGAATGACAGCCAATTGAAAATCAC 59.072 36.000 7.12 0.00 0.00 3.06
1099 1100 5.733620 ATGACAGCCAATTGAAAATCACT 57.266 34.783 7.12 0.00 0.00 3.41
1100 1101 5.125100 TGACAGCCAATTGAAAATCACTC 57.875 39.130 7.12 0.00 0.00 3.51
1101 1102 4.583907 TGACAGCCAATTGAAAATCACTCA 59.416 37.500 7.12 0.00 0.00 3.41
1102 1103 5.130292 ACAGCCAATTGAAAATCACTCAG 57.870 39.130 7.12 0.00 0.00 3.35
1103 1104 3.924686 CAGCCAATTGAAAATCACTCAGC 59.075 43.478 7.12 0.00 0.00 4.26
1104 1105 3.830755 AGCCAATTGAAAATCACTCAGCT 59.169 39.130 7.12 0.00 0.00 4.24
1105 1106 3.924686 GCCAATTGAAAATCACTCAGCTG 59.075 43.478 7.63 7.63 0.00 4.24
1106 1107 4.321452 GCCAATTGAAAATCACTCAGCTGA 60.321 41.667 17.19 17.19 0.00 4.26
1107 1108 5.775686 CCAATTGAAAATCACTCAGCTGAA 58.224 37.500 18.85 3.02 0.00 3.02
1108 1109 6.218019 CCAATTGAAAATCACTCAGCTGAAA 58.782 36.000 18.85 6.00 0.00 2.69
1109 1110 6.702723 CCAATTGAAAATCACTCAGCTGAAAA 59.297 34.615 18.85 6.34 0.00 2.29
1110 1111 7.386848 CCAATTGAAAATCACTCAGCTGAAAAT 59.613 33.333 18.85 8.49 0.00 1.82
1111 1112 9.414295 CAATTGAAAATCACTCAGCTGAAAATA 57.586 29.630 18.85 4.04 0.00 1.40
1112 1113 9.635520 AATTGAAAATCACTCAGCTGAAAATAG 57.364 29.630 18.85 8.15 0.00 1.73
1113 1114 6.615088 TGAAAATCACTCAGCTGAAAATAGC 58.385 36.000 18.85 4.25 44.01 2.97
1114 1115 6.207221 TGAAAATCACTCAGCTGAAAATAGCA 59.793 34.615 18.85 6.78 46.07 3.49
1115 1116 6.579666 AAATCACTCAGCTGAAAATAGCAA 57.420 33.333 18.85 0.00 46.07 3.91
1116 1117 6.579666 AATCACTCAGCTGAAAATAGCAAA 57.420 33.333 18.85 0.00 46.07 3.68
1117 1118 6.579666 ATCACTCAGCTGAAAATAGCAAAA 57.420 33.333 18.85 0.00 46.07 2.44
1118 1119 5.762045 TCACTCAGCTGAAAATAGCAAAAC 58.238 37.500 18.85 0.00 46.07 2.43
1119 1120 4.919754 CACTCAGCTGAAAATAGCAAAACC 59.080 41.667 18.85 0.00 46.07 3.27
1120 1121 4.159377 TCAGCTGAAAATAGCAAAACCG 57.841 40.909 15.67 0.00 46.07 4.44
1121 1122 3.568007 TCAGCTGAAAATAGCAAAACCGT 59.432 39.130 15.67 0.00 46.07 4.83
1122 1123 4.037446 TCAGCTGAAAATAGCAAAACCGTT 59.963 37.500 15.67 0.00 46.07 4.44
1123 1124 5.239744 TCAGCTGAAAATAGCAAAACCGTTA 59.760 36.000 15.67 0.00 46.07 3.18
1124 1125 5.918011 CAGCTGAAAATAGCAAAACCGTTAA 59.082 36.000 8.42 0.00 46.07 2.01
1125 1126 6.419413 CAGCTGAAAATAGCAAAACCGTTAAA 59.581 34.615 8.42 0.00 46.07 1.52
1126 1127 6.981559 AGCTGAAAATAGCAAAACCGTTAAAA 59.018 30.769 0.00 0.00 46.07 1.52
1127 1128 7.492994 AGCTGAAAATAGCAAAACCGTTAAAAA 59.507 29.630 0.00 0.00 46.07 1.94
1149 1150 6.575162 AAAAGACCCAGATATGTTGTTGAC 57.425 37.500 0.00 0.00 0.00 3.18
1150 1151 4.908601 AGACCCAGATATGTTGTTGACA 57.091 40.909 0.00 0.00 43.71 3.58
1151 1152 5.241403 AGACCCAGATATGTTGTTGACAA 57.759 39.130 0.00 0.00 42.62 3.18
1164 1165 4.431416 TGTTGACAACTCATACCAACCT 57.569 40.909 18.73 0.00 37.04 3.50
1165 1166 4.133820 TGTTGACAACTCATACCAACCTG 58.866 43.478 18.73 0.00 37.04 4.00
1166 1167 4.134563 GTTGACAACTCATACCAACCTGT 58.865 43.478 11.18 0.00 33.13 4.00
1167 1168 3.738982 TGACAACTCATACCAACCTGTG 58.261 45.455 0.00 0.00 0.00 3.66
1181 1182 3.703001 ACCTGTGGTTGAGATGGTTAG 57.297 47.619 0.00 0.00 27.29 2.34
1182 1183 2.305927 ACCTGTGGTTGAGATGGTTAGG 59.694 50.000 0.00 0.00 27.29 2.69
1183 1184 2.305927 CCTGTGGTTGAGATGGTTAGGT 59.694 50.000 0.00 0.00 0.00 3.08
1184 1185 3.338249 CTGTGGTTGAGATGGTTAGGTG 58.662 50.000 0.00 0.00 0.00 4.00
1185 1186 2.039746 TGTGGTTGAGATGGTTAGGTGG 59.960 50.000 0.00 0.00 0.00 4.61
1186 1187 2.304761 GTGGTTGAGATGGTTAGGTGGA 59.695 50.000 0.00 0.00 0.00 4.02
1187 1188 2.304761 TGGTTGAGATGGTTAGGTGGAC 59.695 50.000 0.00 0.00 0.00 4.02
1188 1189 2.304761 GGTTGAGATGGTTAGGTGGACA 59.695 50.000 0.00 0.00 0.00 4.02
1189 1190 3.600388 GTTGAGATGGTTAGGTGGACAG 58.400 50.000 0.00 0.00 0.00 3.51
1190 1191 2.902608 TGAGATGGTTAGGTGGACAGT 58.097 47.619 0.00 0.00 0.00 3.55
1191 1192 2.567169 TGAGATGGTTAGGTGGACAGTG 59.433 50.000 0.00 0.00 0.00 3.66
1192 1193 1.909302 AGATGGTTAGGTGGACAGTGG 59.091 52.381 0.00 0.00 0.00 4.00
1193 1194 1.628846 GATGGTTAGGTGGACAGTGGT 59.371 52.381 0.00 0.00 0.00 4.16
1194 1195 2.402182 TGGTTAGGTGGACAGTGGTA 57.598 50.000 0.00 0.00 0.00 3.25
1195 1196 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
1196 1197 3.253220 TGGTTAGGTGGACAGTGGTATT 58.747 45.455 0.00 0.00 0.00 1.89
1197 1198 3.262405 TGGTTAGGTGGACAGTGGTATTC 59.738 47.826 0.00 0.00 0.00 1.75
1198 1199 3.518303 GGTTAGGTGGACAGTGGTATTCT 59.482 47.826 0.00 0.00 0.00 2.40
1199 1200 4.382793 GGTTAGGTGGACAGTGGTATTCTC 60.383 50.000 0.00 0.00 0.00 2.87
1200 1201 2.902608 AGGTGGACAGTGGTATTCTCA 58.097 47.619 0.00 0.00 0.00 3.27
1201 1202 3.248024 AGGTGGACAGTGGTATTCTCAA 58.752 45.455 0.00 0.00 0.00 3.02
1202 1203 3.008049 AGGTGGACAGTGGTATTCTCAAC 59.992 47.826 0.00 0.00 0.00 3.18
1203 1204 3.335579 GTGGACAGTGGTATTCTCAACC 58.664 50.000 0.00 0.00 37.53 3.77
1204 1205 2.304761 TGGACAGTGGTATTCTCAACCC 59.695 50.000 0.00 0.00 36.06 4.11
1205 1206 2.304761 GGACAGTGGTATTCTCAACCCA 59.695 50.000 0.00 0.00 36.06 4.51
1206 1207 3.335579 GACAGTGGTATTCTCAACCCAC 58.664 50.000 0.00 0.00 46.17 4.61
1207 1208 2.039879 ACAGTGGTATTCTCAACCCACC 59.960 50.000 4.15 0.00 46.84 4.61
1208 1209 2.039746 CAGTGGTATTCTCAACCCACCA 59.960 50.000 4.15 0.00 46.84 4.17
1209 1210 2.305927 AGTGGTATTCTCAACCCACCAG 59.694 50.000 4.15 0.00 46.84 4.00
1210 1211 1.633432 TGGTATTCTCAACCCACCAGG 59.367 52.381 0.00 0.00 43.78 4.45
1226 1227 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
1227 1228 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
1228 1229 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
1229 1230 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
1230 1231 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
1231 1232 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
1232 1233 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
1233 1234 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
1234 1235 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
1235 1236 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
1236 1237 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
1237 1238 1.953559 TCCTGGTGCTCGCATTATTC 58.046 50.000 0.00 0.00 0.00 1.75
1238 1239 0.947244 CCTGGTGCTCGCATTATTCC 59.053 55.000 0.00 0.00 0.00 3.01
1239 1240 1.475751 CCTGGTGCTCGCATTATTCCT 60.476 52.381 0.00 0.00 0.00 3.36
1240 1241 1.600957 CTGGTGCTCGCATTATTCCTG 59.399 52.381 0.00 0.00 0.00 3.86
1241 1242 0.947244 GGTGCTCGCATTATTCCTGG 59.053 55.000 0.00 0.00 0.00 4.45
1242 1243 1.475034 GGTGCTCGCATTATTCCTGGA 60.475 52.381 0.00 0.00 0.00 3.86
1243 1244 2.498167 GTGCTCGCATTATTCCTGGAT 58.502 47.619 0.00 0.00 0.00 3.41
1244 1245 2.880890 GTGCTCGCATTATTCCTGGATT 59.119 45.455 0.00 0.00 0.00 3.01
1245 1246 3.316308 GTGCTCGCATTATTCCTGGATTT 59.684 43.478 0.00 0.00 0.00 2.17
1246 1247 4.515191 GTGCTCGCATTATTCCTGGATTTA 59.485 41.667 0.00 0.00 0.00 1.40
1247 1248 5.182001 GTGCTCGCATTATTCCTGGATTTAT 59.818 40.000 0.00 0.00 0.00 1.40
1248 1249 5.769662 TGCTCGCATTATTCCTGGATTTATT 59.230 36.000 0.00 0.00 0.00 1.40
1249 1250 6.265196 TGCTCGCATTATTCCTGGATTTATTT 59.735 34.615 0.00 0.00 0.00 1.40
1250 1251 6.803807 GCTCGCATTATTCCTGGATTTATTTC 59.196 38.462 0.00 0.00 0.00 2.17
1251 1252 7.522073 GCTCGCATTATTCCTGGATTTATTTCA 60.522 37.037 0.00 0.00 0.00 2.69
1252 1253 7.874940 TCGCATTATTCCTGGATTTATTTCAG 58.125 34.615 0.00 0.00 0.00 3.02
1253 1254 7.719193 TCGCATTATTCCTGGATTTATTTCAGA 59.281 33.333 0.00 0.00 0.00 3.27
1254 1255 8.352201 CGCATTATTCCTGGATTTATTTCAGAA 58.648 33.333 0.00 0.00 0.00 3.02
1260 1261 9.807649 ATTCCTGGATTTATTTCAGAATTTTCG 57.192 29.630 0.00 0.00 0.00 3.46
1261 1262 7.771183 TCCTGGATTTATTTCAGAATTTTCGG 58.229 34.615 0.00 0.00 0.00 4.30
1262 1263 6.476706 CCTGGATTTATTTCAGAATTTTCGGC 59.523 38.462 0.00 0.00 0.00 5.54
1263 1264 6.033341 TGGATTTATTTCAGAATTTTCGGCG 58.967 36.000 0.00 0.00 0.00 6.46
1264 1265 6.127869 TGGATTTATTTCAGAATTTTCGGCGA 60.128 34.615 4.99 4.99 0.00 5.54
1265 1266 6.918022 GGATTTATTTCAGAATTTTCGGCGAT 59.082 34.615 11.76 0.00 0.00 4.58
1266 1267 7.096477 GGATTTATTTCAGAATTTTCGGCGATG 60.096 37.037 11.76 4.79 0.00 3.84
1267 1268 2.542766 TTCAGAATTTTCGGCGATGC 57.457 45.000 11.76 0.00 0.00 3.91
1268 1269 0.373370 TCAGAATTTTCGGCGATGCG 59.627 50.000 11.76 0.00 0.00 4.73
1279 1280 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
1280 1281 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
1281 1282 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
1282 1283 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
1283 1284 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
1284 1285 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
1285 1286 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
1286 1287 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
1287 1288 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
1288 1289 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
1289 1290 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
1290 1291 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
1313 1314 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
1316 1317 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
1318 1319 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
1321 1322 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
1322 1323 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
1323 1324 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
1324 1325 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
1325 1326 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
1326 1327 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
1327 1328 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
1328 1329 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
1329 1330 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
1330 1331 4.349501 CCTACGGTGACTTCGTAAATCTC 58.650 47.826 0.00 0.00 41.62 2.75
1331 1332 3.928727 ACGGTGACTTCGTAAATCTCA 57.071 42.857 0.00 0.00 39.22 3.27
1332 1333 4.247267 ACGGTGACTTCGTAAATCTCAA 57.753 40.909 0.00 0.00 39.22 3.02
1333 1334 4.235360 ACGGTGACTTCGTAAATCTCAAG 58.765 43.478 0.00 0.00 39.22 3.02
1334 1335 4.022589 ACGGTGACTTCGTAAATCTCAAGA 60.023 41.667 0.00 0.00 39.22 3.02
1335 1336 5.103000 CGGTGACTTCGTAAATCTCAAGAT 58.897 41.667 0.00 0.00 36.07 2.40
1336 1337 5.004821 CGGTGACTTCGTAAATCTCAAGATG 59.995 44.000 0.00 0.00 34.49 2.90
1337 1338 6.100004 GGTGACTTCGTAAATCTCAAGATGA 58.900 40.000 0.00 0.00 34.49 2.92
1338 1339 6.758886 GGTGACTTCGTAAATCTCAAGATGAT 59.241 38.462 0.00 0.00 34.49 2.45
1339 1340 7.921214 GGTGACTTCGTAAATCTCAAGATGATA 59.079 37.037 0.00 0.00 34.49 2.15
1340 1341 9.469807 GTGACTTCGTAAATCTCAAGATGATAT 57.530 33.333 0.00 0.00 34.49 1.63
1341 1342 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
1342 1343 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
1343 1344 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
1344 1345 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
1345 1346 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
1346 1347 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
1347 1348 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
1348 1349 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
1349 1350 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
1350 1351 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
1351 1352 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
1352 1353 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
1353 1354 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
1354 1355 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
1355 1356 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
1356 1357 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
1357 1358 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
1358 1359 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
1359 1360 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
1360 1361 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
1361 1362 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
1362 1363 1.878656 CGGCTCAGTCTTTCGGAGGT 61.879 60.000 0.00 0.00 38.48 3.85
1363 1364 0.390472 GGCTCAGTCTTTCGGAGGTG 60.390 60.000 0.00 0.00 38.48 4.00
1364 1365 1.016653 GCTCAGTCTTTCGGAGGTGC 61.017 60.000 0.00 0.00 38.48 5.01
1365 1366 0.605589 CTCAGTCTTTCGGAGGTGCT 59.394 55.000 0.00 0.00 35.32 4.40
1366 1367 0.603569 TCAGTCTTTCGGAGGTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
1367 1368 0.318441 CAGTCTTTCGGAGGTGCTCA 59.682 55.000 0.00 0.00 31.08 4.26
1368 1369 1.066573 CAGTCTTTCGGAGGTGCTCAT 60.067 52.381 0.00 0.00 31.08 2.90
1369 1370 2.166459 CAGTCTTTCGGAGGTGCTCATA 59.834 50.000 0.00 0.00 31.08 2.15
1370 1371 2.428890 AGTCTTTCGGAGGTGCTCATAG 59.571 50.000 0.00 0.00 31.08 2.23
1371 1372 1.757118 TCTTTCGGAGGTGCTCATAGG 59.243 52.381 0.00 0.00 31.08 2.57
1372 1373 0.830648 TTTCGGAGGTGCTCATAGGG 59.169 55.000 0.00 0.00 31.08 3.53
1373 1374 1.048724 TTCGGAGGTGCTCATAGGGG 61.049 60.000 0.00 0.00 31.08 4.79
1374 1375 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
1375 1376 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
1376 1377 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
1377 1378 1.133136 GGAGGTGCTCATAGGGGTAGA 60.133 57.143 0.00 0.00 31.08 2.59
1378 1379 2.243810 GAGGTGCTCATAGGGGTAGAG 58.756 57.143 0.00 0.00 0.00 2.43
1379 1380 1.576272 AGGTGCTCATAGGGGTAGAGT 59.424 52.381 0.00 0.00 0.00 3.24
1380 1381 1.689273 GGTGCTCATAGGGGTAGAGTG 59.311 57.143 0.00 0.00 0.00 3.51
1381 1382 2.389715 GTGCTCATAGGGGTAGAGTGT 58.610 52.381 0.00 0.00 0.00 3.55
1382 1383 2.101582 GTGCTCATAGGGGTAGAGTGTG 59.898 54.545 0.00 0.00 0.00 3.82
1383 1384 1.069358 GCTCATAGGGGTAGAGTGTGC 59.931 57.143 0.00 0.00 0.00 4.57
1384 1385 1.338337 CTCATAGGGGTAGAGTGTGCG 59.662 57.143 0.00 0.00 0.00 5.34
1385 1386 1.112113 CATAGGGGTAGAGTGTGCGT 58.888 55.000 0.00 0.00 0.00 5.24
1386 1387 1.112113 ATAGGGGTAGAGTGTGCGTG 58.888 55.000 0.00 0.00 0.00 5.34
1387 1388 0.251474 TAGGGGTAGAGTGTGCGTGT 60.251 55.000 0.00 0.00 0.00 4.49
1388 1389 1.374252 GGGGTAGAGTGTGCGTGTG 60.374 63.158 0.00 0.00 0.00 3.82
1389 1390 1.366366 GGGTAGAGTGTGCGTGTGT 59.634 57.895 0.00 0.00 0.00 3.72
1390 1391 0.944311 GGGTAGAGTGTGCGTGTGTG 60.944 60.000 0.00 0.00 0.00 3.82
1391 1392 1.557443 GGTAGAGTGTGCGTGTGTGC 61.557 60.000 0.00 0.00 0.00 4.57
1392 1393 1.660264 TAGAGTGTGCGTGTGTGCG 60.660 57.895 0.00 0.00 37.81 5.34
1393 1394 2.344521 TAGAGTGTGCGTGTGTGCGT 62.345 55.000 0.00 0.00 37.81 5.24
1394 1395 2.808958 GAGTGTGCGTGTGTGCGTT 61.809 57.895 0.00 0.00 37.81 4.84
1395 1396 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
1396 1397 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
1397 1398 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
1398 1399 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
1399 1400 0.233590 GTGCGTGTGTGCGTTCATAA 59.766 50.000 0.00 0.00 37.81 1.90
1400 1401 0.510790 TGCGTGTGTGCGTTCATAAG 59.489 50.000 0.00 0.00 37.81 1.73
1401 1402 0.179225 GCGTGTGTGCGTTCATAAGG 60.179 55.000 0.00 0.00 0.00 2.69
1402 1403 0.442310 CGTGTGTGCGTTCATAAGGG 59.558 55.000 0.00 0.00 0.00 3.95
1403 1404 1.519408 GTGTGTGCGTTCATAAGGGT 58.481 50.000 0.00 0.00 0.00 4.34
1404 1405 1.196808 GTGTGTGCGTTCATAAGGGTG 59.803 52.381 0.00 0.00 0.00 4.61
1405 1406 1.070914 TGTGTGCGTTCATAAGGGTGA 59.929 47.619 0.00 0.00 0.00 4.02
1406 1407 1.732259 GTGTGCGTTCATAAGGGTGAG 59.268 52.381 0.00 0.00 0.00 3.51
1407 1408 1.346395 TGTGCGTTCATAAGGGTGAGT 59.654 47.619 0.00 0.00 0.00 3.41
1408 1409 1.732259 GTGCGTTCATAAGGGTGAGTG 59.268 52.381 0.00 0.00 0.00 3.51
1409 1410 1.346395 TGCGTTCATAAGGGTGAGTGT 59.654 47.619 0.00 0.00 0.00 3.55
1410 1411 2.563620 TGCGTTCATAAGGGTGAGTGTA 59.436 45.455 0.00 0.00 0.00 2.90
1411 1412 3.196901 TGCGTTCATAAGGGTGAGTGTAT 59.803 43.478 0.00 0.00 0.00 2.29
1412 1413 3.555956 GCGTTCATAAGGGTGAGTGTATG 59.444 47.826 0.00 0.00 0.00 2.39
1413 1414 3.555956 CGTTCATAAGGGTGAGTGTATGC 59.444 47.826 0.00 0.00 0.00 3.14
1414 1415 3.452755 TCATAAGGGTGAGTGTATGCG 57.547 47.619 0.00 0.00 0.00 4.73
1415 1416 1.867233 CATAAGGGTGAGTGTATGCGC 59.133 52.381 0.00 0.00 0.00 6.09
1416 1417 0.179121 TAAGGGTGAGTGTATGCGCG 60.179 55.000 0.00 0.00 0.00 6.86
1417 1418 2.125673 GGGTGAGTGTATGCGCGT 60.126 61.111 8.43 7.55 0.00 6.01
1418 1419 2.452813 GGGTGAGTGTATGCGCGTG 61.453 63.158 13.61 0.00 0.00 5.34
1419 1420 1.736645 GGTGAGTGTATGCGCGTGT 60.737 57.895 13.61 0.00 0.00 4.49
1420 1421 0.457166 GGTGAGTGTATGCGCGTGTA 60.457 55.000 13.61 0.00 0.00 2.90
1421 1422 1.556564 GTGAGTGTATGCGCGTGTAT 58.443 50.000 13.61 4.63 0.00 2.29
1422 1423 2.542205 GGTGAGTGTATGCGCGTGTATA 60.542 50.000 13.61 2.40 0.00 1.47
1423 1424 3.305964 GTGAGTGTATGCGCGTGTATAT 58.694 45.455 13.61 0.00 0.00 0.86
1424 1425 3.119628 GTGAGTGTATGCGCGTGTATATG 59.880 47.826 13.61 0.00 0.00 1.78
1425 1426 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
1426 1427 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
1427 1428 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
1430 1431 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
1431 1432 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
1432 1433 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
1433 1434 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
1434 1435 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
1435 1436 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
1436 1437 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
1437 1438 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
1438 1439 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
1439 1440 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
1440 1441 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
1441 1442 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
1442 1443 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
1443 1444 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
1444 1445 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
1445 1446 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
1446 1447 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
1447 1448 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
1448 1449 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
1449 1450 3.070018 GCTTGTGTCTGTACTGATGCTT 58.930 45.455 5.69 0.00 0.00 3.91
1450 1451 4.245660 GCTTGTGTCTGTACTGATGCTTA 58.754 43.478 5.69 0.00 0.00 3.09
1451 1452 4.690748 GCTTGTGTCTGTACTGATGCTTAA 59.309 41.667 5.69 0.00 0.00 1.85
1452 1453 5.179368 GCTTGTGTCTGTACTGATGCTTAAA 59.821 40.000 5.69 0.00 0.00 1.52
1453 1454 6.293407 GCTTGTGTCTGTACTGATGCTTAAAA 60.293 38.462 5.69 0.00 0.00 1.52
1454 1455 7.561021 TTGTGTCTGTACTGATGCTTAAAAA 57.439 32.000 5.69 0.00 0.00 1.94
1498 1499 5.758924 AGAAGGAACGTTTTGATTTGCTAC 58.241 37.500 0.46 0.00 0.00 3.58
1499 1500 5.298276 AGAAGGAACGTTTTGATTTGCTACA 59.702 36.000 0.46 0.00 0.00 2.74
1500 1501 5.508200 AGGAACGTTTTGATTTGCTACAA 57.492 34.783 0.46 0.00 0.00 2.41
1501 1502 5.519722 AGGAACGTTTTGATTTGCTACAAG 58.480 37.500 0.46 0.00 0.00 3.16
1502 1503 4.148174 GGAACGTTTTGATTTGCTACAAGC 59.852 41.667 0.46 0.00 42.82 4.01
1503 1504 3.638484 ACGTTTTGATTTGCTACAAGCC 58.362 40.909 0.00 0.00 41.51 4.35
1504 1505 2.986479 CGTTTTGATTTGCTACAAGCCC 59.014 45.455 0.00 0.00 41.51 5.19
1505 1506 3.551863 CGTTTTGATTTGCTACAAGCCCA 60.552 43.478 0.00 0.00 41.51 5.36
1561 1562 2.340337 GTAAGCACCACGTAACCGATT 58.660 47.619 0.00 0.00 37.88 3.34
1639 1863 1.472276 CGCGACGATTCTTTCCTCCG 61.472 60.000 0.00 0.00 0.00 4.63
1887 2111 1.830408 CTTCCTCTCCCGCCTCGAT 60.830 63.158 0.00 0.00 0.00 3.59
2016 2240 2.981350 GGGAACAAGCGCCGGAAA 60.981 61.111 5.05 0.00 0.00 3.13
2172 2398 2.158957 TGCGTAGGATGAAGGTGATTCC 60.159 50.000 0.00 0.00 37.08 3.01
2182 2408 2.683211 AGGTGATTCCTGGTGCTTTT 57.317 45.000 0.00 0.00 46.19 2.27
2195 2421 2.550606 GGTGCTTTTACGTGGTGATTGA 59.449 45.455 0.00 0.00 0.00 2.57
2351 2581 1.514678 TTGTGCCCGCTGATGTTGTC 61.515 55.000 0.00 0.00 0.00 3.18
2355 2585 2.350895 CCGCTGATGTTGTCCCCA 59.649 61.111 0.00 0.00 0.00 4.96
2356 2586 1.746615 CCGCTGATGTTGTCCCCAG 60.747 63.158 0.00 0.00 0.00 4.45
2598 2832 8.680001 CATGATGACTTGATAAAATGTGAAGGA 58.320 33.333 0.00 0.00 0.00 3.36
2606 2841 7.938140 TGATAAAATGTGAAGGAAAGTAGGG 57.062 36.000 0.00 0.00 0.00 3.53
2628 2863 2.358125 TCGGGTTGGATGTGTGCG 60.358 61.111 0.00 0.00 0.00 5.34
2630 2865 2.672996 GGGTTGGATGTGTGCGCT 60.673 61.111 9.73 0.00 0.00 5.92
2631 2866 2.268076 GGGTTGGATGTGTGCGCTT 61.268 57.895 9.73 0.00 0.00 4.68
2644 2879 4.329801 TGTGTGCGCTTGATAAGTTGATAG 59.670 41.667 9.73 0.00 0.00 2.08
2658 2893 5.064441 AGTTGATAGCAGTGAAAAATGCC 57.936 39.130 0.00 0.00 43.60 4.40
2678 2913 3.869912 GCCTGACTTCTTTGCCACTATGA 60.870 47.826 0.00 0.00 0.00 2.15
2679 2914 4.521146 CCTGACTTCTTTGCCACTATGAT 58.479 43.478 0.00 0.00 0.00 2.45
2693 2928 5.545588 CCACTATGATGGTGACTAGGAATG 58.454 45.833 10.71 0.00 36.89 2.67
2949 3198 5.697473 TGATTTGTCAATTAGCACGGAAA 57.303 34.783 0.00 0.00 0.00 3.13
3047 3302 7.335673 GGGGAAGATCTTGAAGTTTCTTTAGAG 59.664 40.741 14.00 0.00 0.00 2.43
3048 3303 7.880713 GGGAAGATCTTGAAGTTTCTTTAGAGT 59.119 37.037 14.00 0.00 0.00 3.24
3049 3304 9.278978 GGAAGATCTTGAAGTTTCTTTAGAGTT 57.721 33.333 14.00 0.00 0.00 3.01
3205 3465 5.502153 ACATTAGACGAGTCCATCTGTAC 57.498 43.478 0.00 0.00 0.00 2.90
3262 3529 6.595682 TCATTATCTTGATCCAAGTTCCTCC 58.404 40.000 6.59 0.00 41.66 4.30
3456 3765 7.492669 TGTTTAATTTGTTTCGCTCATTTTCCA 59.507 29.630 0.00 0.00 0.00 3.53
3476 3785 2.163010 CACTGCAGGGTTCATGAATCAC 59.837 50.000 20.07 10.93 0.00 3.06
3672 3990 0.325671 AGAGTGGGATGTCGGTGGAT 60.326 55.000 0.00 0.00 0.00 3.41
3684 4005 2.044946 GTGGATTGCGGGCCTTCT 60.045 61.111 0.84 0.00 0.00 2.85
3820 4141 5.665812 TGTCCAGCATATTACTTACTCCCTT 59.334 40.000 0.00 0.00 0.00 3.95
3834 4155 4.674281 ACTCCCTTCGCTTCCTAAATAG 57.326 45.455 0.00 0.00 0.00 1.73
3835 4156 3.388350 ACTCCCTTCGCTTCCTAAATAGG 59.612 47.826 0.00 0.00 45.02 2.57
3895 4216 8.734218 ACTACATTCGGATGTATATAGACGAT 57.266 34.615 16.89 0.00 45.20 3.73
3927 4248 3.904136 AAGTTCACTCATTTTGCTCCG 57.096 42.857 0.00 0.00 0.00 4.63
3931 4252 4.393062 AGTTCACTCATTTTGCTCCGTATG 59.607 41.667 0.00 0.00 0.00 2.39
3942 4263 5.624344 TTGCTCCGTATGTAGTCTATAGC 57.376 43.478 0.00 0.00 0.00 2.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 5.300752 CGCTATTGGTTATTGACAGGAGAT 58.699 41.667 0.00 0.00 0.00 2.75
73 74 3.942748 GGTTCCGCTATTGGTTATTGACA 59.057 43.478 0.00 0.00 0.00 3.58
359 360 2.359900 AGGATTTGTCACTCCGATTGC 58.640 47.619 0.00 0.00 36.62 3.56
422 423 6.385759 TGGGTGATTATAAAGGAGCTCTACAA 59.614 38.462 14.64 0.00 0.00 2.41
489 490 3.016736 AGATTATGCAACTCCCGTTTGG 58.983 45.455 0.00 0.00 0.00 3.28
623 624 8.585471 AGTTGTCATTTGATTAACAGGATCAT 57.415 30.769 0.00 0.00 33.82 2.45
857 858 9.590451 CTCCGTTTATAGGAAAATACACTGTAA 57.410 33.333 0.00 0.00 37.32 2.41
859 860 7.046033 CCTCCGTTTATAGGAAAATACACTGT 58.954 38.462 0.00 0.00 37.32 3.55
860 861 6.482308 CCCTCCGTTTATAGGAAAATACACTG 59.518 42.308 0.00 0.00 37.32 3.66
861 862 6.384886 TCCCTCCGTTTATAGGAAAATACACT 59.615 38.462 0.00 0.00 37.32 3.55
863 864 6.612456 TCTCCCTCCGTTTATAGGAAAATACA 59.388 38.462 0.00 0.00 37.32 2.29
864 865 7.059202 TCTCCCTCCGTTTATAGGAAAATAC 57.941 40.000 0.00 0.00 37.32 1.89
865 866 7.679732 TTCTCCCTCCGTTTATAGGAAAATA 57.320 36.000 0.00 0.00 37.32 1.40
866 867 6.570654 TTCTCCCTCCGTTTATAGGAAAAT 57.429 37.500 0.00 0.00 37.32 1.82
867 868 6.377245 TTTCTCCCTCCGTTTATAGGAAAA 57.623 37.500 0.00 0.00 37.32 2.29
868 869 5.104652 CCTTTCTCCCTCCGTTTATAGGAAA 60.105 44.000 0.00 0.00 37.32 3.13
869 870 4.407945 CCTTTCTCCCTCCGTTTATAGGAA 59.592 45.833 0.00 0.00 37.32 3.36
870 871 3.965347 CCTTTCTCCCTCCGTTTATAGGA 59.035 47.826 0.00 0.00 34.58 2.94
871 872 3.965347 TCCTTTCTCCCTCCGTTTATAGG 59.035 47.826 0.00 0.00 0.00 2.57
872 873 5.609533 TTCCTTTCTCCCTCCGTTTATAG 57.390 43.478 0.00 0.00 0.00 1.31
873 874 6.214005 TCTTTTCCTTTCTCCCTCCGTTTATA 59.786 38.462 0.00 0.00 0.00 0.98
874 875 4.921644 TTTCCTTTCTCCCTCCGTTTAT 57.078 40.909 0.00 0.00 0.00 1.40
875 876 4.348754 TCTTTTCCTTTCTCCCTCCGTTTA 59.651 41.667 0.00 0.00 0.00 2.01
876 877 3.137728 TCTTTTCCTTTCTCCCTCCGTTT 59.862 43.478 0.00 0.00 0.00 3.60
877 878 2.709397 TCTTTTCCTTTCTCCCTCCGTT 59.291 45.455 0.00 0.00 0.00 4.44
878 879 2.303311 CTCTTTTCCTTTCTCCCTCCGT 59.697 50.000 0.00 0.00 0.00 4.69
879 880 2.355209 CCTCTTTTCCTTTCTCCCTCCG 60.355 54.545 0.00 0.00 0.00 4.63
880 881 2.025793 CCCTCTTTTCCTTTCTCCCTCC 60.026 54.545 0.00 0.00 0.00 4.30
881 882 2.913617 TCCCTCTTTTCCTTTCTCCCTC 59.086 50.000 0.00 0.00 0.00 4.30
882 883 2.916269 CTCCCTCTTTTCCTTTCTCCCT 59.084 50.000 0.00 0.00 0.00 4.20
883 884 2.913617 TCTCCCTCTTTTCCTTTCTCCC 59.086 50.000 0.00 0.00 0.00 4.30
884 885 4.642466 TTCTCCCTCTTTTCCTTTCTCC 57.358 45.455 0.00 0.00 0.00 3.71
885 886 5.007034 CCTTTCTCCCTCTTTTCCTTTCTC 58.993 45.833 0.00 0.00 0.00 2.87
886 887 4.665483 TCCTTTCTCCCTCTTTTCCTTTCT 59.335 41.667 0.00 0.00 0.00 2.52
887 888 4.986783 TCCTTTCTCCCTCTTTTCCTTTC 58.013 43.478 0.00 0.00 0.00 2.62
888 889 5.403558 TTCCTTTCTCCCTCTTTTCCTTT 57.596 39.130 0.00 0.00 0.00 3.11
889 890 5.403558 TTTCCTTTCTCCCTCTTTTCCTT 57.596 39.130 0.00 0.00 0.00 3.36
890 891 5.134509 TCTTTTCCTTTCTCCCTCTTTTCCT 59.865 40.000 0.00 0.00 0.00 3.36
891 892 5.386060 TCTTTTCCTTTCTCCCTCTTTTCC 58.614 41.667 0.00 0.00 0.00 3.13
892 893 6.961360 TTCTTTTCCTTTCTCCCTCTTTTC 57.039 37.500 0.00 0.00 0.00 2.29
893 894 7.733773 TTTTCTTTTCCTTTCTCCCTCTTTT 57.266 32.000 0.00 0.00 0.00 2.27
894 895 7.733773 TTTTTCTTTTCCTTTCTCCCTCTTT 57.266 32.000 0.00 0.00 0.00 2.52
918 919 2.982470 CCGTTACTAGACGCTCGTTTTT 59.018 45.455 0.00 0.00 41.50 1.94
919 920 2.589014 CCGTTACTAGACGCTCGTTTT 58.411 47.619 0.00 0.00 41.50 2.43
920 921 1.135575 CCCGTTACTAGACGCTCGTTT 60.136 52.381 0.00 0.00 41.50 3.60
921 922 0.449388 CCCGTTACTAGACGCTCGTT 59.551 55.000 0.00 0.00 41.50 3.85
922 923 1.986575 GCCCGTTACTAGACGCTCGT 61.987 60.000 0.00 0.00 41.50 4.18
923 924 1.298190 GCCCGTTACTAGACGCTCG 60.298 63.158 0.00 0.00 41.50 5.03
924 925 0.248539 CTGCCCGTTACTAGACGCTC 60.249 60.000 0.00 0.00 41.50 5.03
925 926 0.679002 TCTGCCCGTTACTAGACGCT 60.679 55.000 0.00 0.00 41.50 5.07
926 927 0.525029 GTCTGCCCGTTACTAGACGC 60.525 60.000 0.00 0.00 41.50 5.19
927 928 0.100146 GGTCTGCCCGTTACTAGACG 59.900 60.000 0.00 0.00 40.24 4.18
928 929 0.459078 GGGTCTGCCCGTTACTAGAC 59.541 60.000 0.00 0.00 46.51 2.59
929 930 2.892025 GGGTCTGCCCGTTACTAGA 58.108 57.895 0.00 0.00 46.51 2.43
939 940 1.712018 GCGGTTTTATCGGGTCTGCC 61.712 60.000 0.00 0.00 0.00 4.85
940 941 1.719709 GCGGTTTTATCGGGTCTGC 59.280 57.895 0.00 0.00 0.00 4.26
941 942 2.003672 CGCGGTTTTATCGGGTCTG 58.996 57.895 0.00 0.00 36.13 3.51
942 943 1.812507 GCGCGGTTTTATCGGGTCT 60.813 57.895 8.83 0.00 41.57 3.85
943 944 2.705220 GCGCGGTTTTATCGGGTC 59.295 61.111 8.83 0.00 41.57 4.46
944 945 2.820922 GGCGCGGTTTTATCGGGT 60.821 61.111 8.83 0.00 41.57 5.28
945 946 3.579232 GGGCGCGGTTTTATCGGG 61.579 66.667 8.83 0.00 42.26 5.14
946 947 2.400158 TTGGGCGCGGTTTTATCGG 61.400 57.895 8.83 0.00 0.00 4.18
947 948 1.226184 GTTGGGCGCGGTTTTATCG 60.226 57.895 8.83 0.00 0.00 2.92
948 949 0.241481 TTGTTGGGCGCGGTTTTATC 59.759 50.000 8.83 0.00 0.00 1.75
949 950 0.674534 TTTGTTGGGCGCGGTTTTAT 59.325 45.000 8.83 0.00 0.00 1.40
950 951 0.458669 TTTTGTTGGGCGCGGTTTTA 59.541 45.000 8.83 0.00 0.00 1.52
951 952 0.179070 ATTTTGTTGGGCGCGGTTTT 60.179 45.000 8.83 0.00 0.00 2.43
952 953 0.674534 TATTTTGTTGGGCGCGGTTT 59.325 45.000 8.83 0.00 0.00 3.27
953 954 0.674534 TTATTTTGTTGGGCGCGGTT 59.325 45.000 8.83 0.00 0.00 4.44
954 955 0.674534 TTTATTTTGTTGGGCGCGGT 59.325 45.000 8.83 0.00 0.00 5.68
955 956 1.457683 GTTTTATTTTGTTGGGCGCGG 59.542 47.619 8.83 0.00 0.00 6.46
956 957 1.457683 GGTTTTATTTTGTTGGGCGCG 59.542 47.619 0.00 0.00 0.00 6.86
957 958 1.457683 CGGTTTTATTTTGTTGGGCGC 59.542 47.619 0.00 0.00 0.00 6.53
958 959 3.014604 TCGGTTTTATTTTGTTGGGCG 57.985 42.857 0.00 0.00 0.00 6.13
959 960 3.495377 GGTTCGGTTTTATTTTGTTGGGC 59.505 43.478 0.00 0.00 0.00 5.36
960 961 4.059511 GGGTTCGGTTTTATTTTGTTGGG 58.940 43.478 0.00 0.00 0.00 4.12
961 962 3.736759 CGGGTTCGGTTTTATTTTGTTGG 59.263 43.478 0.00 0.00 0.00 3.77
962 963 4.957832 CGGGTTCGGTTTTATTTTGTTG 57.042 40.909 0.00 0.00 0.00 3.33
976 977 0.589708 GTCCTTTTGAACCGGGTTCG 59.410 55.000 29.26 17.54 44.55 3.95
977 978 1.682740 TGTCCTTTTGAACCGGGTTC 58.317 50.000 28.87 28.87 42.26 3.62
978 979 1.752498 GTTGTCCTTTTGAACCGGGTT 59.248 47.619 13.26 13.26 0.00 4.11
979 980 1.395635 GTTGTCCTTTTGAACCGGGT 58.604 50.000 6.32 0.00 0.00 5.28
980 981 0.671796 GGTTGTCCTTTTGAACCGGG 59.328 55.000 6.32 0.00 30.33 5.73
981 982 1.336755 CTGGTTGTCCTTTTGAACCGG 59.663 52.381 0.00 0.00 41.85 5.28
982 983 1.269051 GCTGGTTGTCCTTTTGAACCG 60.269 52.381 0.00 0.00 41.85 4.44
983 984 1.068588 GGCTGGTTGTCCTTTTGAACC 59.931 52.381 0.00 0.00 39.77 3.62
984 985 1.754226 TGGCTGGTTGTCCTTTTGAAC 59.246 47.619 0.00 0.00 34.23 3.18
985 986 1.754226 GTGGCTGGTTGTCCTTTTGAA 59.246 47.619 0.00 0.00 34.23 2.69
986 987 1.341482 TGTGGCTGGTTGTCCTTTTGA 60.341 47.619 0.00 0.00 34.23 2.69
987 988 1.110442 TGTGGCTGGTTGTCCTTTTG 58.890 50.000 0.00 0.00 34.23 2.44
988 989 1.859302 TTGTGGCTGGTTGTCCTTTT 58.141 45.000 0.00 0.00 34.23 2.27
989 990 1.859302 TTTGTGGCTGGTTGTCCTTT 58.141 45.000 0.00 0.00 34.23 3.11
990 991 1.480545 GTTTTGTGGCTGGTTGTCCTT 59.519 47.619 0.00 0.00 34.23 3.36
991 992 1.111277 GTTTTGTGGCTGGTTGTCCT 58.889 50.000 0.00 0.00 34.23 3.85
992 993 0.104120 GGTTTTGTGGCTGGTTGTCC 59.896 55.000 0.00 0.00 0.00 4.02
993 994 0.820871 TGGTTTTGTGGCTGGTTGTC 59.179 50.000 0.00 0.00 0.00 3.18
994 995 0.534873 GTGGTTTTGTGGCTGGTTGT 59.465 50.000 0.00 0.00 0.00 3.32
995 996 0.534412 TGTGGTTTTGTGGCTGGTTG 59.466 50.000 0.00 0.00 0.00 3.77
996 997 0.823460 CTGTGGTTTTGTGGCTGGTT 59.177 50.000 0.00 0.00 0.00 3.67
997 998 0.033601 TCTGTGGTTTTGTGGCTGGT 60.034 50.000 0.00 0.00 0.00 4.00
998 999 1.270550 GATCTGTGGTTTTGTGGCTGG 59.729 52.381 0.00 0.00 0.00 4.85
999 1000 2.233271 AGATCTGTGGTTTTGTGGCTG 58.767 47.619 0.00 0.00 0.00 4.85
1000 1001 2.664402 AGATCTGTGGTTTTGTGGCT 57.336 45.000 0.00 0.00 0.00 4.75
1001 1002 3.366374 GCTAAGATCTGTGGTTTTGTGGC 60.366 47.826 0.00 0.00 0.00 5.01
1002 1003 3.120199 CGCTAAGATCTGTGGTTTTGTGG 60.120 47.826 0.00 0.00 0.00 4.17
1003 1004 3.498397 ACGCTAAGATCTGTGGTTTTGTG 59.502 43.478 0.00 0.00 0.00 3.33
1004 1005 3.498397 CACGCTAAGATCTGTGGTTTTGT 59.502 43.478 0.00 0.00 0.00 2.83
1005 1006 3.745975 TCACGCTAAGATCTGTGGTTTTG 59.254 43.478 10.16 0.00 33.25 2.44
1006 1007 4.002906 TCACGCTAAGATCTGTGGTTTT 57.997 40.909 10.16 0.00 33.25 2.43
1007 1008 3.678056 TCACGCTAAGATCTGTGGTTT 57.322 42.857 10.16 0.00 33.25 3.27
1008 1009 3.678056 TTCACGCTAAGATCTGTGGTT 57.322 42.857 10.16 0.00 33.25 3.67
1009 1010 3.895232 ATTCACGCTAAGATCTGTGGT 57.105 42.857 10.16 0.00 33.25 4.16
1010 1011 5.109210 TGTAATTCACGCTAAGATCTGTGG 58.891 41.667 10.16 0.00 33.25 4.17
1011 1012 6.345329 CGATGTAATTCACGCTAAGATCTGTG 60.345 42.308 0.00 0.00 0.00 3.66
1012 1013 5.687730 CGATGTAATTCACGCTAAGATCTGT 59.312 40.000 0.00 0.00 0.00 3.41
1013 1014 5.387855 GCGATGTAATTCACGCTAAGATCTG 60.388 44.000 0.00 0.00 40.50 2.90
1014 1015 4.681942 GCGATGTAATTCACGCTAAGATCT 59.318 41.667 0.00 0.00 40.50 2.75
1015 1016 4.431728 CGCGATGTAATTCACGCTAAGATC 60.432 45.833 0.00 0.00 41.02 2.75
1016 1017 3.425525 CGCGATGTAATTCACGCTAAGAT 59.574 43.478 0.00 0.00 41.02 2.40
1017 1018 2.787129 CGCGATGTAATTCACGCTAAGA 59.213 45.455 0.00 0.00 41.02 2.10
1018 1019 2.656632 GCGCGATGTAATTCACGCTAAG 60.657 50.000 12.10 0.00 41.02 2.18
1019 1020 1.256895 GCGCGATGTAATTCACGCTAA 59.743 47.619 12.10 0.00 41.02 3.09
1020 1021 0.850217 GCGCGATGTAATTCACGCTA 59.150 50.000 12.10 0.00 41.02 4.26
1021 1022 1.636340 GCGCGATGTAATTCACGCT 59.364 52.632 12.10 0.00 41.02 5.07
1022 1023 1.714366 CGCGCGATGTAATTCACGC 60.714 57.895 28.94 0.00 40.38 5.34
1023 1024 0.502695 ATCGCGCGATGTAATTCACG 59.497 50.000 41.43 3.87 32.98 4.35
1024 1025 1.458665 CGATCGCGCGATGTAATTCAC 60.459 52.381 46.02 27.93 34.60 3.18
1025 1026 0.775861 CGATCGCGCGATGTAATTCA 59.224 50.000 46.02 17.76 34.60 2.57
1026 1027 0.091344 CCGATCGCGCGATGTAATTC 59.909 55.000 46.02 30.58 34.60 2.17
1027 1028 0.318360 TCCGATCGCGCGATGTAATT 60.318 50.000 46.02 25.74 34.60 1.40
1028 1029 1.002250 GTCCGATCGCGCGATGTAAT 61.002 55.000 46.02 26.56 34.60 1.89
1029 1030 1.656263 GTCCGATCGCGCGATGTAA 60.656 57.895 46.02 27.85 34.60 2.41
1030 1031 2.051614 GTCCGATCGCGCGATGTA 60.052 61.111 46.02 28.24 34.60 2.29
1038 1039 4.508128 TCTTGGCCGTCCGATCGC 62.508 66.667 10.32 0.00 34.14 4.58
1039 1040 2.278857 CTCTTGGCCGTCCGATCG 60.279 66.667 8.51 8.51 34.14 3.69
1040 1041 0.391263 AAACTCTTGGCCGTCCGATC 60.391 55.000 0.00 0.00 34.14 3.69
1041 1042 0.673644 CAAACTCTTGGCCGTCCGAT 60.674 55.000 0.00 0.00 34.14 4.18
1042 1043 1.301401 CAAACTCTTGGCCGTCCGA 60.301 57.895 0.00 0.00 34.14 4.55
1043 1044 0.882927 TTCAAACTCTTGGCCGTCCG 60.883 55.000 0.00 0.00 33.01 4.79
1044 1045 1.200020 CATTCAAACTCTTGGCCGTCC 59.800 52.381 0.00 0.00 33.01 4.79
1045 1046 2.151202 TCATTCAAACTCTTGGCCGTC 58.849 47.619 0.00 0.00 33.01 4.79
1046 1047 2.270352 TCATTCAAACTCTTGGCCGT 57.730 45.000 0.00 0.00 33.01 5.68
1047 1048 4.635765 TCTTATCATTCAAACTCTTGGCCG 59.364 41.667 0.00 0.00 33.01 6.13
1048 1049 6.515272 TTCTTATCATTCAAACTCTTGGCC 57.485 37.500 0.00 0.00 33.01 5.36
1049 1050 8.866956 CAAATTCTTATCATTCAAACTCTTGGC 58.133 33.333 0.00 0.00 33.01 4.52
1058 1059 9.577110 GCTGTCATTCAAATTCTTATCATTCAA 57.423 29.630 0.00 0.00 0.00 2.69
1059 1060 8.192774 GGCTGTCATTCAAATTCTTATCATTCA 58.807 33.333 0.00 0.00 0.00 2.57
1060 1061 8.192774 TGGCTGTCATTCAAATTCTTATCATTC 58.807 33.333 0.00 0.00 0.00 2.67
1061 1062 8.070034 TGGCTGTCATTCAAATTCTTATCATT 57.930 30.769 0.00 0.00 0.00 2.57
1062 1063 7.649533 TGGCTGTCATTCAAATTCTTATCAT 57.350 32.000 0.00 0.00 0.00 2.45
1063 1064 7.465353 TTGGCTGTCATTCAAATTCTTATCA 57.535 32.000 0.00 0.00 0.00 2.15
1064 1065 8.814235 CAATTGGCTGTCATTCAAATTCTTATC 58.186 33.333 0.00 0.00 0.00 1.75
1065 1066 8.533657 TCAATTGGCTGTCATTCAAATTCTTAT 58.466 29.630 5.42 0.00 0.00 1.73
1066 1067 7.894708 TCAATTGGCTGTCATTCAAATTCTTA 58.105 30.769 5.42 0.00 0.00 2.10
1067 1068 6.761312 TCAATTGGCTGTCATTCAAATTCTT 58.239 32.000 5.42 0.00 0.00 2.52
1068 1069 6.349243 TCAATTGGCTGTCATTCAAATTCT 57.651 33.333 5.42 0.00 0.00 2.40
1069 1070 7.424227 TTTCAATTGGCTGTCATTCAAATTC 57.576 32.000 5.42 0.00 0.00 2.17
1070 1071 7.804843 TTTTCAATTGGCTGTCATTCAAATT 57.195 28.000 5.42 0.00 0.00 1.82
1071 1072 7.662258 TGATTTTCAATTGGCTGTCATTCAAAT 59.338 29.630 5.42 0.00 0.00 2.32
1072 1073 6.990939 TGATTTTCAATTGGCTGTCATTCAAA 59.009 30.769 5.42 0.00 0.00 2.69
1073 1074 6.424509 GTGATTTTCAATTGGCTGTCATTCAA 59.575 34.615 5.42 0.00 0.00 2.69
1074 1075 5.927689 GTGATTTTCAATTGGCTGTCATTCA 59.072 36.000 5.42 0.00 0.00 2.57
1075 1076 6.161381 AGTGATTTTCAATTGGCTGTCATTC 58.839 36.000 5.42 0.00 0.00 2.67
1076 1077 6.105397 AGTGATTTTCAATTGGCTGTCATT 57.895 33.333 5.42 0.58 0.00 2.57
1077 1078 5.244402 TGAGTGATTTTCAATTGGCTGTCAT 59.756 36.000 5.42 0.00 0.00 3.06
1078 1079 4.583907 TGAGTGATTTTCAATTGGCTGTCA 59.416 37.500 5.42 3.32 0.00 3.58
1079 1080 5.125100 TGAGTGATTTTCAATTGGCTGTC 57.875 39.130 5.42 0.72 0.00 3.51
1080 1081 4.560108 GCTGAGTGATTTTCAATTGGCTGT 60.560 41.667 5.42 0.00 0.00 4.40
1081 1082 3.924686 GCTGAGTGATTTTCAATTGGCTG 59.075 43.478 5.42 0.00 0.00 4.85
1082 1083 3.830755 AGCTGAGTGATTTTCAATTGGCT 59.169 39.130 5.42 0.00 31.69 4.75
1083 1084 3.924686 CAGCTGAGTGATTTTCAATTGGC 59.075 43.478 8.42 0.00 0.00 4.52
1084 1085 5.381174 TCAGCTGAGTGATTTTCAATTGG 57.619 39.130 13.74 0.00 0.00 3.16
1085 1086 7.703298 TTTTCAGCTGAGTGATTTTCAATTG 57.297 32.000 17.43 0.00 0.00 2.32
1086 1087 9.635520 CTATTTTCAGCTGAGTGATTTTCAATT 57.364 29.630 17.43 4.37 0.00 2.32
1087 1088 7.758528 GCTATTTTCAGCTGAGTGATTTTCAAT 59.241 33.333 17.43 7.67 38.57 2.57
1088 1089 7.086376 GCTATTTTCAGCTGAGTGATTTTCAA 58.914 34.615 17.43 1.84 38.57 2.69
1089 1090 6.207221 TGCTATTTTCAGCTGAGTGATTTTCA 59.793 34.615 17.43 6.97 42.30 2.69
1090 1091 6.615088 TGCTATTTTCAGCTGAGTGATTTTC 58.385 36.000 17.43 4.51 42.30 2.29
1091 1092 6.579666 TGCTATTTTCAGCTGAGTGATTTT 57.420 33.333 17.43 1.99 42.30 1.82
1092 1093 6.579666 TTGCTATTTTCAGCTGAGTGATTT 57.420 33.333 17.43 3.03 42.30 2.17
1093 1094 6.579666 TTTGCTATTTTCAGCTGAGTGATT 57.420 33.333 17.43 6.50 42.30 2.57
1094 1095 6.385033 GTTTTGCTATTTTCAGCTGAGTGAT 58.615 36.000 17.43 13.90 42.30 3.06
1095 1096 5.278463 GGTTTTGCTATTTTCAGCTGAGTGA 60.278 40.000 17.43 7.34 42.30 3.41
1096 1097 4.919754 GGTTTTGCTATTTTCAGCTGAGTG 59.080 41.667 17.43 7.68 42.30 3.51
1097 1098 4.320494 CGGTTTTGCTATTTTCAGCTGAGT 60.320 41.667 17.43 9.79 42.30 3.41
1098 1099 4.161333 CGGTTTTGCTATTTTCAGCTGAG 58.839 43.478 17.43 6.01 42.30 3.35
1099 1100 3.568007 ACGGTTTTGCTATTTTCAGCTGA 59.432 39.130 13.74 13.74 42.30 4.26
1100 1101 3.900941 ACGGTTTTGCTATTTTCAGCTG 58.099 40.909 7.63 7.63 42.30 4.24
1101 1102 4.584327 AACGGTTTTGCTATTTTCAGCT 57.416 36.364 0.00 0.00 42.30 4.24
1102 1103 6.757026 TTTAACGGTTTTGCTATTTTCAGC 57.243 33.333 0.00 0.00 42.15 4.26
1125 1126 6.549364 TGTCAACAACATATCTGGGTCTTTTT 59.451 34.615 0.00 0.00 31.20 1.94
1126 1127 6.068010 TGTCAACAACATATCTGGGTCTTTT 58.932 36.000 0.00 0.00 31.20 2.27
1127 1128 5.630121 TGTCAACAACATATCTGGGTCTTT 58.370 37.500 0.00 0.00 31.20 2.52
1128 1129 5.241403 TGTCAACAACATATCTGGGTCTT 57.759 39.130 0.00 0.00 31.20 3.01
1129 1130 4.908601 TGTCAACAACATATCTGGGTCT 57.091 40.909 0.00 0.00 31.20 3.85
1142 1143 4.578516 CAGGTTGGTATGAGTTGTCAACAA 59.421 41.667 17.78 6.07 39.33 2.83
1143 1144 4.133820 CAGGTTGGTATGAGTTGTCAACA 58.866 43.478 17.78 0.00 39.33 3.33
1144 1145 4.024048 CACAGGTTGGTATGAGTTGTCAAC 60.024 45.833 7.68 7.68 35.88 3.18
1145 1146 4.133820 CACAGGTTGGTATGAGTTGTCAA 58.866 43.478 0.00 0.00 35.88 3.18
1146 1147 3.495983 CCACAGGTTGGTATGAGTTGTCA 60.496 47.826 0.00 0.00 41.10 3.58
1147 1148 3.074412 CCACAGGTTGGTATGAGTTGTC 58.926 50.000 0.00 0.00 41.10 3.18
1148 1149 3.140325 CCACAGGTTGGTATGAGTTGT 57.860 47.619 0.00 0.00 41.10 3.32
1161 1162 2.305927 CCTAACCATCTCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
1162 1163 2.305927 ACCTAACCATCTCAACCACAGG 59.694 50.000 0.00 0.00 0.00 4.00
1163 1164 3.338249 CACCTAACCATCTCAACCACAG 58.662 50.000 0.00 0.00 0.00 3.66
1164 1165 2.039746 CCACCTAACCATCTCAACCACA 59.960 50.000 0.00 0.00 0.00 4.17
1165 1166 2.304761 TCCACCTAACCATCTCAACCAC 59.695 50.000 0.00 0.00 0.00 4.16
1166 1167 2.304761 GTCCACCTAACCATCTCAACCA 59.695 50.000 0.00 0.00 0.00 3.67
1167 1168 2.304761 TGTCCACCTAACCATCTCAACC 59.695 50.000 0.00 0.00 0.00 3.77
1168 1169 3.008049 ACTGTCCACCTAACCATCTCAAC 59.992 47.826 0.00 0.00 0.00 3.18
1169 1170 3.007940 CACTGTCCACCTAACCATCTCAA 59.992 47.826 0.00 0.00 0.00 3.02
1170 1171 2.567169 CACTGTCCACCTAACCATCTCA 59.433 50.000 0.00 0.00 0.00 3.27
1171 1172 2.093447 CCACTGTCCACCTAACCATCTC 60.093 54.545 0.00 0.00 0.00 2.75
1172 1173 1.909302 CCACTGTCCACCTAACCATCT 59.091 52.381 0.00 0.00 0.00 2.90
1173 1174 1.628846 ACCACTGTCCACCTAACCATC 59.371 52.381 0.00 0.00 0.00 3.51
1174 1175 1.742308 ACCACTGTCCACCTAACCAT 58.258 50.000 0.00 0.00 0.00 3.55
1175 1176 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
1176 1177 3.518303 AGAATACCACTGTCCACCTAACC 59.482 47.826 0.00 0.00 0.00 2.85
1177 1178 4.222145 TGAGAATACCACTGTCCACCTAAC 59.778 45.833 0.00 0.00 0.00 2.34
1178 1179 4.422057 TGAGAATACCACTGTCCACCTAA 58.578 43.478 0.00 0.00 0.00 2.69
1179 1180 4.055710 TGAGAATACCACTGTCCACCTA 57.944 45.455 0.00 0.00 0.00 3.08
1180 1181 2.902608 TGAGAATACCACTGTCCACCT 58.097 47.619 0.00 0.00 0.00 4.00
1181 1182 3.335579 GTTGAGAATACCACTGTCCACC 58.664 50.000 0.00 0.00 0.00 4.61
1182 1183 3.335579 GGTTGAGAATACCACTGTCCAC 58.664 50.000 0.00 0.00 35.67 4.02
1183 1184 2.304761 GGGTTGAGAATACCACTGTCCA 59.695 50.000 0.00 0.00 37.40 4.02
1184 1185 2.304761 TGGGTTGAGAATACCACTGTCC 59.695 50.000 0.00 0.00 37.40 4.02
1185 1186 3.695830 TGGGTTGAGAATACCACTGTC 57.304 47.619 0.00 0.00 37.40 3.51
1190 1191 1.633432 CCTGGTGGGTTGAGAATACCA 59.367 52.381 0.00 0.00 38.98 3.25
1191 1192 2.420058 CCTGGTGGGTTGAGAATACC 57.580 55.000 0.00 0.00 34.82 2.73
1203 1204 1.549203 CAGGATTTGAACCCTGGTGG 58.451 55.000 0.00 0.00 44.68 4.61
1208 1209 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
1209 1210 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
1210 1211 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
1211 1212 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
1212 1213 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
1213 1214 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
1214 1215 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
1215 1216 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
1216 1217 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
1217 1218 2.498167 GAATAATGCGAGCACCAGGAT 58.502 47.619 0.00 0.00 0.00 3.24
1218 1219 1.475034 GGAATAATGCGAGCACCAGGA 60.475 52.381 0.00 0.00 0.00 3.86
1219 1220 0.947244 GGAATAATGCGAGCACCAGG 59.053 55.000 0.00 0.00 0.00 4.45
1220 1221 1.600957 CAGGAATAATGCGAGCACCAG 59.399 52.381 0.00 0.00 0.00 4.00
1221 1222 1.667236 CAGGAATAATGCGAGCACCA 58.333 50.000 0.00 0.00 0.00 4.17
1222 1223 0.947244 CCAGGAATAATGCGAGCACC 59.053 55.000 0.00 0.00 0.00 5.01
1223 1224 1.953559 TCCAGGAATAATGCGAGCAC 58.046 50.000 0.00 0.00 0.00 4.40
1224 1225 2.936919 ATCCAGGAATAATGCGAGCA 57.063 45.000 0.00 0.00 0.00 4.26
1225 1226 5.886960 ATAAATCCAGGAATAATGCGAGC 57.113 39.130 0.00 0.00 0.00 5.03
1226 1227 7.874940 TGAAATAAATCCAGGAATAATGCGAG 58.125 34.615 0.00 0.00 0.00 5.03
1227 1228 7.719193 TCTGAAATAAATCCAGGAATAATGCGA 59.281 33.333 0.00 0.00 0.00 5.10
1228 1229 7.874940 TCTGAAATAAATCCAGGAATAATGCG 58.125 34.615 0.00 0.00 0.00 4.73
1234 1235 9.807649 CGAAAATTCTGAAATAAATCCAGGAAT 57.192 29.630 0.00 0.00 0.00 3.01
1235 1236 8.250332 CCGAAAATTCTGAAATAAATCCAGGAA 58.750 33.333 0.00 0.00 0.00 3.36
1236 1237 7.630513 GCCGAAAATTCTGAAATAAATCCAGGA 60.631 37.037 0.00 0.00 0.00 3.86
1237 1238 6.476706 GCCGAAAATTCTGAAATAAATCCAGG 59.523 38.462 0.00 0.00 0.00 4.45
1238 1239 6.197096 CGCCGAAAATTCTGAAATAAATCCAG 59.803 38.462 0.00 0.00 0.00 3.86
1239 1240 6.033341 CGCCGAAAATTCTGAAATAAATCCA 58.967 36.000 0.00 0.00 0.00 3.41
1240 1241 6.262601 TCGCCGAAAATTCTGAAATAAATCC 58.737 36.000 0.00 0.00 0.00 3.01
1241 1242 7.565789 GCATCGCCGAAAATTCTGAAATAAATC 60.566 37.037 0.00 0.00 0.00 2.17
1242 1243 6.198966 GCATCGCCGAAAATTCTGAAATAAAT 59.801 34.615 0.00 0.00 0.00 1.40
1243 1244 5.514914 GCATCGCCGAAAATTCTGAAATAAA 59.485 36.000 0.00 0.00 0.00 1.40
1244 1245 5.034152 GCATCGCCGAAAATTCTGAAATAA 58.966 37.500 0.00 0.00 0.00 1.40
1245 1246 4.597079 GCATCGCCGAAAATTCTGAAATA 58.403 39.130 0.00 0.00 0.00 1.40
1246 1247 3.438360 GCATCGCCGAAAATTCTGAAAT 58.562 40.909 0.00 0.00 0.00 2.17
1247 1248 2.727607 CGCATCGCCGAAAATTCTGAAA 60.728 45.455 0.00 0.00 0.00 2.69
1248 1249 1.202020 CGCATCGCCGAAAATTCTGAA 60.202 47.619 0.00 0.00 0.00 3.02
1249 1250 0.373370 CGCATCGCCGAAAATTCTGA 59.627 50.000 0.00 0.00 0.00 3.27
1250 1251 2.845600 CGCATCGCCGAAAATTCTG 58.154 52.632 0.00 0.00 0.00 3.02
1262 1263 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
1263 1264 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
1264 1265 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
1265 1266 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
1266 1267 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
1267 1268 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
1268 1269 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
1269 1270 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
1270 1271 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
1271 1272 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
1272 1273 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
1273 1274 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
1274 1275 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
1295 1296 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
1296 1297 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
1309 1310 4.978186 TGAGATTTACGAAGTCACCGTAG 58.022 43.478 0.00 0.00 43.93 3.51
1310 1311 5.181811 TCTTGAGATTTACGAAGTCACCGTA 59.818 40.000 0.00 0.00 43.93 4.02
1311 1312 3.928727 TGAGATTTACGAAGTCACCGT 57.071 42.857 0.00 0.00 43.93 4.83
1312 1313 4.482386 TCTTGAGATTTACGAAGTCACCG 58.518 43.478 0.00 0.00 43.93 4.94
1313 1314 6.100004 TCATCTTGAGATTTACGAAGTCACC 58.900 40.000 0.00 0.00 35.39 4.02
1314 1315 7.763172 ATCATCTTGAGATTTACGAAGTCAC 57.237 36.000 0.00 0.00 35.39 3.67
1315 1316 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
1316 1317 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
1317 1318 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
1318 1319 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
1319 1320 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
1320 1321 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
1321 1322 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
1322 1323 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
1323 1324 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
1324 1325 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
1325 1326 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
1326 1327 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
1327 1328 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
1328 1329 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
1329 1330 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
1330 1331 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
1331 1332 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
1332 1333 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
1333 1334 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
1334 1335 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
1335 1336 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
1336 1337 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
1337 1338 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
1338 1339 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
1339 1340 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
1340 1341 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
1341 1342 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
1342 1343 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
1343 1344 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
1344 1345 0.390472 CACCTCCGAAAGACTGAGCC 60.390 60.000 0.00 0.00 0.00 4.70
1345 1346 1.016653 GCACCTCCGAAAGACTGAGC 61.017 60.000 0.00 0.00 0.00 4.26
1346 1347 0.605589 AGCACCTCCGAAAGACTGAG 59.394 55.000 0.00 0.00 0.00 3.35
1347 1348 0.603569 GAGCACCTCCGAAAGACTGA 59.396 55.000 0.00 0.00 0.00 3.41
1348 1349 0.318441 TGAGCACCTCCGAAAGACTG 59.682 55.000 0.00 0.00 0.00 3.51
1349 1350 1.270907 ATGAGCACCTCCGAAAGACT 58.729 50.000 0.00 0.00 0.00 3.24
1350 1351 2.482142 CCTATGAGCACCTCCGAAAGAC 60.482 54.545 0.00 0.00 0.00 3.01
1351 1352 1.757118 CCTATGAGCACCTCCGAAAGA 59.243 52.381 0.00 0.00 0.00 2.52
1352 1353 1.202580 CCCTATGAGCACCTCCGAAAG 60.203 57.143 0.00 0.00 0.00 2.62
1353 1354 0.830648 CCCTATGAGCACCTCCGAAA 59.169 55.000 0.00 0.00 0.00 3.46
1354 1355 1.048724 CCCCTATGAGCACCTCCGAA 61.049 60.000 0.00 0.00 0.00 4.30
1355 1356 1.457643 CCCCTATGAGCACCTCCGA 60.458 63.158 0.00 0.00 0.00 4.55
1356 1357 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
1357 1358 1.133136 TCTACCCCTATGAGCACCTCC 60.133 57.143 0.00 0.00 0.00 4.30
1358 1359 2.243810 CTCTACCCCTATGAGCACCTC 58.756 57.143 0.00 0.00 0.00 3.85
1359 1360 1.576272 ACTCTACCCCTATGAGCACCT 59.424 52.381 0.00 0.00 0.00 4.00
1360 1361 1.689273 CACTCTACCCCTATGAGCACC 59.311 57.143 0.00 0.00 0.00 5.01
1361 1362 2.101582 CACACTCTACCCCTATGAGCAC 59.898 54.545 0.00 0.00 0.00 4.40
1362 1363 2.388735 CACACTCTACCCCTATGAGCA 58.611 52.381 0.00 0.00 0.00 4.26
1363 1364 1.069358 GCACACTCTACCCCTATGAGC 59.931 57.143 0.00 0.00 0.00 4.26
1364 1365 1.338337 CGCACACTCTACCCCTATGAG 59.662 57.143 0.00 0.00 0.00 2.90
1365 1366 1.341679 ACGCACACTCTACCCCTATGA 60.342 52.381 0.00 0.00 0.00 2.15
1366 1367 1.112113 ACGCACACTCTACCCCTATG 58.888 55.000 0.00 0.00 0.00 2.23
1367 1368 1.112113 CACGCACACTCTACCCCTAT 58.888 55.000 0.00 0.00 0.00 2.57
1368 1369 0.251474 ACACGCACACTCTACCCCTA 60.251 55.000 0.00 0.00 0.00 3.53
1369 1370 1.533273 ACACGCACACTCTACCCCT 60.533 57.895 0.00 0.00 0.00 4.79
1370 1371 1.374252 CACACGCACACTCTACCCC 60.374 63.158 0.00 0.00 0.00 4.95
1371 1372 0.944311 CACACACGCACACTCTACCC 60.944 60.000 0.00 0.00 0.00 3.69
1372 1373 1.557443 GCACACACGCACACTCTACC 61.557 60.000 0.00 0.00 0.00 3.18
1373 1374 1.853319 GCACACACGCACACTCTAC 59.147 57.895 0.00 0.00 0.00 2.59
1374 1375 1.660264 CGCACACACGCACACTCTA 60.660 57.895 0.00 0.00 0.00 2.43
1375 1376 2.961721 CGCACACACGCACACTCT 60.962 61.111 0.00 0.00 0.00 3.24
1376 1377 2.680427 GAACGCACACACGCACACTC 62.680 60.000 0.00 0.00 36.19 3.51
1377 1378 2.808958 GAACGCACACACGCACACT 61.809 57.895 0.00 0.00 36.19 3.55
1378 1379 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
1379 1380 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
1380 1381 0.233590 TTATGAACGCACACACGCAC 59.766 50.000 0.00 0.00 36.19 5.34
1381 1382 0.510790 CTTATGAACGCACACACGCA 59.489 50.000 0.00 0.00 36.19 5.24
1382 1383 0.179225 CCTTATGAACGCACACACGC 60.179 55.000 0.00 0.00 36.19 5.34
1383 1384 0.442310 CCCTTATGAACGCACACACG 59.558 55.000 0.00 0.00 39.50 4.49
1384 1385 1.196808 CACCCTTATGAACGCACACAC 59.803 52.381 0.00 0.00 0.00 3.82
1385 1386 1.070914 TCACCCTTATGAACGCACACA 59.929 47.619 0.00 0.00 0.00 3.72
1386 1387 1.732259 CTCACCCTTATGAACGCACAC 59.268 52.381 0.00 0.00 0.00 3.82
1387 1388 1.346395 ACTCACCCTTATGAACGCACA 59.654 47.619 0.00 0.00 0.00 4.57
1388 1389 1.732259 CACTCACCCTTATGAACGCAC 59.268 52.381 0.00 0.00 0.00 5.34
1389 1390 1.346395 ACACTCACCCTTATGAACGCA 59.654 47.619 0.00 0.00 0.00 5.24
1390 1391 2.094762 ACACTCACCCTTATGAACGC 57.905 50.000 0.00 0.00 0.00 4.84
1391 1392 3.555956 GCATACACTCACCCTTATGAACG 59.444 47.826 0.00 0.00 0.00 3.95
1392 1393 3.555956 CGCATACACTCACCCTTATGAAC 59.444 47.826 0.00 0.00 0.00 3.18
1393 1394 3.792401 CGCATACACTCACCCTTATGAA 58.208 45.455 0.00 0.00 0.00 2.57
1394 1395 2.483013 GCGCATACACTCACCCTTATGA 60.483 50.000 0.30 0.00 0.00 2.15
1395 1396 1.867233 GCGCATACACTCACCCTTATG 59.133 52.381 0.30 0.00 0.00 1.90
1396 1397 1.538204 CGCGCATACACTCACCCTTAT 60.538 52.381 8.75 0.00 0.00 1.73
1397 1398 0.179121 CGCGCATACACTCACCCTTA 60.179 55.000 8.75 0.00 0.00 2.69
1398 1399 1.447838 CGCGCATACACTCACCCTT 60.448 57.895 8.75 0.00 0.00 3.95
1399 1400 2.184322 CGCGCATACACTCACCCT 59.816 61.111 8.75 0.00 0.00 4.34
1400 1401 2.125673 ACGCGCATACACTCACCC 60.126 61.111 5.73 0.00 0.00 4.61
1401 1402 0.457166 TACACGCGCATACACTCACC 60.457 55.000 5.73 0.00 0.00 4.02
1402 1403 1.556564 ATACACGCGCATACACTCAC 58.443 50.000 5.73 0.00 0.00 3.51
1403 1404 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
1404 1405 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
1405 1406 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
1406 1407 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
1407 1408 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
1408 1409 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
1409 1410 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
1410 1411 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
1411 1412 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
1415 1416 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
1416 1417 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
1417 1418 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
1418 1419 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
1419 1420 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
1420 1421 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
1421 1422 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
1422 1423 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
1423 1424 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
1424 1425 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
1425 1426 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
1426 1427 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
1427 1428 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
1428 1429 2.693069 AGCATCAGTACAGACACAAGC 58.307 47.619 0.00 0.00 0.00 4.01
1429 1430 6.785488 TTTAAGCATCAGTACAGACACAAG 57.215 37.500 0.00 0.00 0.00 3.16
1430 1431 7.561021 TTTTTAAGCATCAGTACAGACACAA 57.439 32.000 0.00 0.00 0.00 3.33
1454 1455 9.586435 CCTTCTTGTCAGTTAAAAACTTGATTT 57.414 29.630 0.00 0.00 40.46 2.17
1455 1456 8.966868 TCCTTCTTGTCAGTTAAAAACTTGATT 58.033 29.630 0.00 0.00 40.46 2.57
1456 1457 8.519799 TCCTTCTTGTCAGTTAAAAACTTGAT 57.480 30.769 0.00 0.00 40.46 2.57
1457 1458 7.931578 TCCTTCTTGTCAGTTAAAAACTTGA 57.068 32.000 0.00 0.00 40.46 3.02
1458 1459 7.218204 CGTTCCTTCTTGTCAGTTAAAAACTTG 59.782 37.037 0.00 0.00 40.46 3.16
1459 1460 7.094506 ACGTTCCTTCTTGTCAGTTAAAAACTT 60.095 33.333 0.00 0.00 40.46 2.66
1460 1461 6.373495 ACGTTCCTTCTTGTCAGTTAAAAACT 59.627 34.615 0.00 0.00 44.06 2.66
1461 1462 6.549061 ACGTTCCTTCTTGTCAGTTAAAAAC 58.451 36.000 0.00 0.00 0.00 2.43
1462 1463 6.746745 ACGTTCCTTCTTGTCAGTTAAAAA 57.253 33.333 0.00 0.00 0.00 1.94
1469 1470 4.875544 TCAAAACGTTCCTTCTTGTCAG 57.124 40.909 0.00 0.00 0.00 3.51
1498 1499 1.008538 GAAACGTGTGCTGGGCTTG 60.009 57.895 0.00 0.00 0.00 4.01
1499 1500 0.823356 ATGAAACGTGTGCTGGGCTT 60.823 50.000 0.00 0.00 0.00 4.35
1500 1501 0.823356 AATGAAACGTGTGCTGGGCT 60.823 50.000 0.00 0.00 0.00 5.19
1501 1502 0.031994 AAATGAAACGTGTGCTGGGC 59.968 50.000 0.00 0.00 0.00 5.36
1502 1503 1.066908 ACAAATGAAACGTGTGCTGGG 59.933 47.619 0.00 0.00 0.00 4.45
1503 1504 2.490328 ACAAATGAAACGTGTGCTGG 57.510 45.000 0.00 0.00 0.00 4.85
1504 1505 4.597079 AGTAACAAATGAAACGTGTGCTG 58.403 39.130 0.00 0.00 0.00 4.41
1505 1506 4.893424 AGTAACAAATGAAACGTGTGCT 57.107 36.364 0.00 0.00 0.00 4.40
1557 1558 4.923871 CCAGAAGGGTCGACATAATAATCG 59.076 45.833 18.91 0.00 39.72 3.34
1561 1562 4.960469 ACTTCCAGAAGGGTCGACATAATA 59.040 41.667 18.91 0.00 42.53 0.98
1639 1863 3.554692 CGGCCGATGCGAACAGAC 61.555 66.667 24.07 0.00 38.85 3.51
2121 2347 0.750546 GCAAGAGATCCATGGCAGCA 60.751 55.000 6.96 0.00 0.00 4.41
2169 2395 1.134037 ACCACGTAAAAGCACCAGGAA 60.134 47.619 0.00 0.00 0.00 3.36
2172 2398 1.588674 TCACCACGTAAAAGCACCAG 58.411 50.000 0.00 0.00 0.00 4.00
2351 2581 6.419484 AAGAGAAAATTTGGTTTACTGGGG 57.581 37.500 0.00 0.00 0.00 4.96
2598 2832 2.290705 CCAACCCGACATTCCCTACTTT 60.291 50.000 0.00 0.00 0.00 2.66
2606 2841 1.468520 CACACATCCAACCCGACATTC 59.531 52.381 0.00 0.00 0.00 2.67
2628 2863 6.668541 TTCACTGCTATCAACTTATCAAGC 57.331 37.500 0.00 0.00 0.00 4.01
2630 2865 9.844790 CATTTTTCACTGCTATCAACTTATCAA 57.155 29.630 0.00 0.00 0.00 2.57
2631 2866 7.970061 GCATTTTTCACTGCTATCAACTTATCA 59.030 33.333 0.00 0.00 35.49 2.15
2644 2879 3.005155 AGAAGTCAGGCATTTTTCACTGC 59.995 43.478 0.00 0.00 37.66 4.40
2658 2893 4.334759 CCATCATAGTGGCAAAGAAGTCAG 59.665 45.833 0.00 0.00 31.43 3.51
2678 2913 9.975218 ATAAAGTTTTACATTCCTAGTCACCAT 57.025 29.630 0.00 0.00 0.00 3.55
2679 2914 9.802039 AATAAAGTTTTACATTCCTAGTCACCA 57.198 29.630 0.00 0.00 0.00 4.17
2880 3118 4.141482 TGAGACACTTAACAAGCCCTTTCT 60.141 41.667 0.00 0.00 0.00 2.52
2949 3198 6.874664 TGCACAAACTGATGCATTTGATATTT 59.125 30.769 15.53 2.90 46.63 1.40
3191 3451 3.280295 AGTACCAGTACAGATGGACTCG 58.720 50.000 10.41 0.00 40.51 4.18
3262 3529 4.493708 CGAGACTTTGCAGTATTCATGCTG 60.494 45.833 0.77 0.77 44.17 4.41
3456 3765 2.440409 GTGATTCATGAACCCTGCAGT 58.560 47.619 11.07 0.00 0.00 4.40
3476 3785 4.744570 TCACTTTGTTCCTATGCTACTCG 58.255 43.478 0.00 0.00 0.00 4.18
3672 3990 0.109723 AAACTACAGAAGGCCCGCAA 59.890 50.000 0.00 0.00 0.00 4.85
3927 4248 7.852971 AGAGATTCCGCTATAGACTACATAC 57.147 40.000 3.21 0.00 0.00 2.39
3931 4252 9.396938 GTTTTAAGAGATTCCGCTATAGACTAC 57.603 37.037 3.21 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.