Multiple sequence alignment - TraesCS2A01G378100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G378100 chr2A 100.000 3491 0 0 1 3491 620710457 620713947 0.000000e+00 6447.0
1 TraesCS2A01G378100 chr2A 99.447 723 4 0 1 723 736450729 736450007 0.000000e+00 1314.0
2 TraesCS2A01G378100 chr2A 100.000 377 0 0 3115 3491 620726978 620727354 0.000000e+00 697.0
3 TraesCS2A01G378100 chr2A 79.769 173 33 2 2057 2228 735862403 735862574 1.320000e-24 124.0
4 TraesCS2A01G378100 chr2D 96.460 1695 54 4 888 2582 477830878 477832566 0.000000e+00 2793.0
5 TraesCS2A01G378100 chr2D 89.970 329 30 2 2752 3078 477832769 477833096 4.170000e-114 422.0
6 TraesCS2A01G378100 chr2D 93.284 134 8 1 2580 2712 477832636 477832769 2.750000e-46 196.0
7 TraesCS2A01G378100 chr2D 80.114 176 33 2 2054 2228 603693085 603693259 2.830000e-26 130.0
8 TraesCS2A01G378100 chr2B 95.379 1623 72 3 887 2509 559909683 559911302 0.000000e+00 2579.0
9 TraesCS2A01G378100 chr2B 98.757 724 9 0 1 724 721701963 721702686 0.000000e+00 1288.0
10 TraesCS2A01G378100 chr2B 88.529 401 41 4 2690 3089 559911753 559912149 6.780000e-132 481.0
11 TraesCS2A01G378100 chr2B 89.894 188 10 3 2500 2679 559911327 559911513 2.100000e-57 233.0
12 TraesCS2A01G378100 chr2B 78.977 176 35 2 2054 2228 734460095 734460269 6.120000e-23 119.0
13 TraesCS2A01G378100 chr3B 98.895 724 8 0 1 724 785319653 785320376 0.000000e+00 1293.0
14 TraesCS2A01G378100 chr6B 98.630 730 8 2 1 729 707175976 707175248 0.000000e+00 1291.0
15 TraesCS2A01G378100 chr6B 87.302 63 8 0 2968 3030 47985403 47985341 4.830000e-09 73.1
16 TraesCS2A01G378100 chr4A 98.893 723 8 0 1 723 622191109 622191831 0.000000e+00 1291.0
17 TraesCS2A01G378100 chr4A 99.206 378 3 0 3114 3491 629414829 629414452 0.000000e+00 682.0
18 TraesCS2A01G378100 chr4A 98.947 380 4 0 3112 3491 572359819 572360198 0.000000e+00 680.0
19 TraesCS2A01G378100 chr4A 88.636 176 18 2 2849 3023 538208105 538208279 2.730000e-51 213.0
20 TraesCS2A01G378100 chr4A 86.364 176 22 2 2849 3023 586386244 586386070 1.280000e-44 191.0
21 TraesCS2A01G378100 chr5A 95.166 724 21 3 1 724 395308220 395308929 0.000000e+00 1131.0
22 TraesCS2A01G378100 chr5A 94.890 724 23 3 1 724 78914013 78913304 0.000000e+00 1120.0
23 TraesCS2A01G378100 chr7A 94.882 723 22 4 1 723 85816136 85816843 0.000000e+00 1116.0
24 TraesCS2A01G378100 chr7A 75.839 149 19 10 2826 2973 38694152 38694284 3.760000e-05 60.2
25 TraesCS2A01G378100 chr7B 94.744 723 24 3 1 723 537733952 537733244 0.000000e+00 1112.0
26 TraesCS2A01G378100 chr7B 99.204 377 3 0 3115 3491 297777452 297777076 0.000000e+00 680.0
27 TraesCS2A01G378100 chr6A 99.472 379 2 0 3113 3491 94109808 94109430 0.000000e+00 689.0
28 TraesCS2A01G378100 chr6A 99.469 377 2 0 3115 3491 94097619 94097243 0.000000e+00 686.0
29 TraesCS2A01G378100 chr6A 99.469 377 2 0 3115 3491 445507753 445507377 0.000000e+00 686.0
30 TraesCS2A01G378100 chr1B 99.204 377 3 0 3115 3491 6902035 6902411 0.000000e+00 680.0
31 TraesCS2A01G378100 chr1B 99.204 377 3 0 3115 3491 6914291 6914667 0.000000e+00 680.0
32 TraesCS2A01G378100 chr5B 84.470 264 29 5 2826 3089 327747757 327748008 2.080000e-62 250.0
33 TraesCS2A01G378100 chrUn 75.839 149 19 10 2826 2973 288487625 288487757 3.760000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G378100 chr2A 620710457 620713947 3490 False 6447.000000 6447 100.000000 1 3491 1 chr2A.!!$F1 3490
1 TraesCS2A01G378100 chr2A 736450007 736450729 722 True 1314.000000 1314 99.447000 1 723 1 chr2A.!!$R1 722
2 TraesCS2A01G378100 chr2D 477830878 477833096 2218 False 1137.000000 2793 93.238000 888 3078 3 chr2D.!!$F2 2190
3 TraesCS2A01G378100 chr2B 721701963 721702686 723 False 1288.000000 1288 98.757000 1 724 1 chr2B.!!$F1 723
4 TraesCS2A01G378100 chr2B 559909683 559912149 2466 False 1097.666667 2579 91.267333 887 3089 3 chr2B.!!$F3 2202
5 TraesCS2A01G378100 chr3B 785319653 785320376 723 False 1293.000000 1293 98.895000 1 724 1 chr3B.!!$F1 723
6 TraesCS2A01G378100 chr6B 707175248 707175976 728 True 1291.000000 1291 98.630000 1 729 1 chr6B.!!$R2 728
7 TraesCS2A01G378100 chr4A 622191109 622191831 722 False 1291.000000 1291 98.893000 1 723 1 chr4A.!!$F3 722
8 TraesCS2A01G378100 chr5A 395308220 395308929 709 False 1131.000000 1131 95.166000 1 724 1 chr5A.!!$F1 723
9 TraesCS2A01G378100 chr5A 78913304 78914013 709 True 1120.000000 1120 94.890000 1 724 1 chr5A.!!$R1 723
10 TraesCS2A01G378100 chr7A 85816136 85816843 707 False 1116.000000 1116 94.882000 1 723 1 chr7A.!!$F2 722
11 TraesCS2A01G378100 chr7B 537733244 537733952 708 True 1112.000000 1112 94.744000 1 723 1 chr7B.!!$R2 722

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
784 785 0.035439 CACCGCCCAGGACAACTAAT 60.035 55.0 0.0 0.0 45.0 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2747 3089 0.034198 TCACGGGTGATTTGCTTCGA 59.966 50.0 0.0 0.0 34.14 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
197 198 6.564709 TGATTCTGAACTTCTGAATGTTGG 57.435 37.500 22.01 4.28 42.53 3.77
200 201 6.773976 TTCTGAACTTCTGAATGTTGGTTT 57.226 33.333 6.94 0.00 30.89 3.27
724 725 7.486551 GCTAAAACTCATGTCTCTAGTAGTGTG 59.513 40.741 0.00 0.00 0.00 3.82
725 726 4.974368 ACTCATGTCTCTAGTAGTGTGC 57.026 45.455 0.00 0.00 0.00 4.57
729 730 1.810755 TGTCTCTAGTAGTGTGCGTGG 59.189 52.381 0.00 0.00 0.00 4.94
730 731 2.082231 GTCTCTAGTAGTGTGCGTGGA 58.918 52.381 0.00 0.00 0.00 4.02
731 732 2.486982 GTCTCTAGTAGTGTGCGTGGAA 59.513 50.000 0.00 0.00 0.00 3.53
732 733 3.128938 GTCTCTAGTAGTGTGCGTGGAAT 59.871 47.826 0.00 0.00 0.00 3.01
733 734 3.128764 TCTCTAGTAGTGTGCGTGGAATG 59.871 47.826 0.00 0.00 0.00 2.67
734 735 2.823747 TCTAGTAGTGTGCGTGGAATGT 59.176 45.455 0.00 0.00 0.00 2.71
735 736 2.543777 AGTAGTGTGCGTGGAATGTT 57.456 45.000 0.00 0.00 0.00 2.71
736 737 2.413837 AGTAGTGTGCGTGGAATGTTC 58.586 47.619 0.00 0.00 0.00 3.18
737 738 1.126113 GTAGTGTGCGTGGAATGTTCG 59.874 52.381 0.00 0.00 0.00 3.95
738 739 0.531974 AGTGTGCGTGGAATGTTCGT 60.532 50.000 0.00 0.00 0.00 3.85
739 740 0.306533 GTGTGCGTGGAATGTTCGTT 59.693 50.000 0.00 0.00 0.00 3.85
740 741 0.584396 TGTGCGTGGAATGTTCGTTC 59.416 50.000 0.00 0.00 0.00 3.95
741 742 0.450482 GTGCGTGGAATGTTCGTTCG 60.450 55.000 0.00 0.00 0.00 3.95
742 743 0.876777 TGCGTGGAATGTTCGTTCGT 60.877 50.000 0.00 0.00 0.00 3.85
743 744 0.179258 GCGTGGAATGTTCGTTCGTC 60.179 55.000 0.00 0.00 0.00 4.20
744 745 1.415374 CGTGGAATGTTCGTTCGTCT 58.585 50.000 0.00 0.00 0.00 4.18
745 746 1.790623 CGTGGAATGTTCGTTCGTCTT 59.209 47.619 0.00 0.00 0.00 3.01
746 747 2.220133 CGTGGAATGTTCGTTCGTCTTT 59.780 45.455 0.00 0.00 0.00 2.52
747 748 3.541711 GTGGAATGTTCGTTCGTCTTTG 58.458 45.455 0.00 0.00 0.00 2.77
748 749 2.032377 TGGAATGTTCGTTCGTCTTTGC 60.032 45.455 0.00 0.00 0.00 3.68
749 750 2.571206 GAATGTTCGTTCGTCTTTGCC 58.429 47.619 0.00 0.00 0.00 4.52
750 751 0.872388 ATGTTCGTTCGTCTTTGCCC 59.128 50.000 0.00 0.00 0.00 5.36
751 752 0.179067 TGTTCGTTCGTCTTTGCCCT 60.179 50.000 0.00 0.00 0.00 5.19
752 753 0.942252 GTTCGTTCGTCTTTGCCCTT 59.058 50.000 0.00 0.00 0.00 3.95
753 754 1.332686 GTTCGTTCGTCTTTGCCCTTT 59.667 47.619 0.00 0.00 0.00 3.11
754 755 0.941542 TCGTTCGTCTTTGCCCTTTG 59.058 50.000 0.00 0.00 0.00 2.77
755 756 0.941542 CGTTCGTCTTTGCCCTTTGA 59.058 50.000 0.00 0.00 0.00 2.69
756 757 1.332375 CGTTCGTCTTTGCCCTTTGAA 59.668 47.619 0.00 0.00 0.00 2.69
757 758 2.602217 CGTTCGTCTTTGCCCTTTGAAG 60.602 50.000 0.00 0.00 0.00 3.02
758 759 0.951558 TCGTCTTTGCCCTTTGAAGC 59.048 50.000 0.00 0.00 0.00 3.86
759 760 0.039165 CGTCTTTGCCCTTTGAAGCC 60.039 55.000 0.00 0.00 0.00 4.35
760 761 0.318441 GTCTTTGCCCTTTGAAGCCC 59.682 55.000 0.00 0.00 0.00 5.19
761 762 0.831711 TCTTTGCCCTTTGAAGCCCC 60.832 55.000 0.00 0.00 0.00 5.80
762 763 2.158561 CTTTGCCCTTTGAAGCCCCG 62.159 60.000 0.00 0.00 0.00 5.73
763 764 2.648613 TTTGCCCTTTGAAGCCCCGA 62.649 55.000 0.00 0.00 0.00 5.14
764 765 3.062466 GCCCTTTGAAGCCCCGAC 61.062 66.667 0.00 0.00 0.00 4.79
765 766 2.361230 CCCTTTGAAGCCCCGACC 60.361 66.667 0.00 0.00 0.00 4.79
766 767 2.434331 CCTTTGAAGCCCCGACCA 59.566 61.111 0.00 0.00 0.00 4.02
767 768 1.971695 CCTTTGAAGCCCCGACCAC 60.972 63.158 0.00 0.00 0.00 4.16
768 769 1.971695 CTTTGAAGCCCCGACCACC 60.972 63.158 0.00 0.00 0.00 4.61
769 770 3.835790 TTTGAAGCCCCGACCACCG 62.836 63.158 0.00 0.00 38.18 4.94
779 780 3.948719 GACCACCGCCCAGGACAA 61.949 66.667 0.00 0.00 45.00 3.18
780 781 4.265056 ACCACCGCCCAGGACAAC 62.265 66.667 0.00 0.00 45.00 3.32
781 782 3.953775 CCACCGCCCAGGACAACT 61.954 66.667 0.00 0.00 45.00 3.16
782 783 2.589157 CCACCGCCCAGGACAACTA 61.589 63.158 0.00 0.00 45.00 2.24
783 784 1.373435 CACCGCCCAGGACAACTAA 59.627 57.895 0.00 0.00 45.00 2.24
784 785 0.035439 CACCGCCCAGGACAACTAAT 60.035 55.000 0.00 0.00 45.00 1.73
785 786 0.696501 ACCGCCCAGGACAACTAATT 59.303 50.000 0.00 0.00 45.00 1.40
786 787 1.074889 ACCGCCCAGGACAACTAATTT 59.925 47.619 0.00 0.00 45.00 1.82
787 788 1.743394 CCGCCCAGGACAACTAATTTC 59.257 52.381 0.00 0.00 45.00 2.17
788 789 1.743394 CGCCCAGGACAACTAATTTCC 59.257 52.381 0.00 0.00 0.00 3.13
789 790 2.618045 CGCCCAGGACAACTAATTTCCT 60.618 50.000 0.00 0.00 40.63 3.36
790 791 3.370103 CGCCCAGGACAACTAATTTCCTA 60.370 47.826 0.00 0.00 37.69 2.94
791 792 4.200092 GCCCAGGACAACTAATTTCCTAG 58.800 47.826 0.00 0.00 37.69 3.02
792 793 4.324331 GCCCAGGACAACTAATTTCCTAGT 60.324 45.833 0.00 0.00 37.69 2.57
793 794 5.806734 GCCCAGGACAACTAATTTCCTAGTT 60.807 44.000 0.00 0.00 41.75 2.24
794 795 6.246163 CCCAGGACAACTAATTTCCTAGTTT 58.754 40.000 0.00 0.00 39.57 2.66
795 796 7.399634 CCCAGGACAACTAATTTCCTAGTTTA 58.600 38.462 0.00 0.00 39.57 2.01
796 797 8.053355 CCCAGGACAACTAATTTCCTAGTTTAT 58.947 37.037 0.00 0.00 39.57 1.40
797 798 9.110502 CCAGGACAACTAATTTCCTAGTTTATC 57.889 37.037 0.00 0.00 39.57 1.75
798 799 9.667107 CAGGACAACTAATTTCCTAGTTTATCA 57.333 33.333 0.00 0.00 39.57 2.15
816 817 9.358406 AGTTTATCAAATATCAATCATGGAGCA 57.642 29.630 0.00 0.00 0.00 4.26
817 818 9.970395 GTTTATCAAATATCAATCATGGAGCAA 57.030 29.630 0.00 0.00 0.00 3.91
822 823 9.577222 TCAAATATCAATCATGGAGCAATAAGA 57.423 29.630 0.00 0.00 0.00 2.10
823 824 9.622004 CAAATATCAATCATGGAGCAATAAGAC 57.378 33.333 0.00 0.00 0.00 3.01
824 825 7.934855 ATATCAATCATGGAGCAATAAGACC 57.065 36.000 0.00 0.00 0.00 3.85
825 826 4.129380 TCAATCATGGAGCAATAAGACCG 58.871 43.478 0.00 0.00 0.00 4.79
826 827 1.953559 TCATGGAGCAATAAGACCGC 58.046 50.000 0.00 0.00 0.00 5.68
827 828 1.486310 TCATGGAGCAATAAGACCGCT 59.514 47.619 0.00 0.00 39.12 5.52
828 829 2.698274 TCATGGAGCAATAAGACCGCTA 59.302 45.455 0.00 0.00 35.75 4.26
829 830 2.596904 TGGAGCAATAAGACCGCTAC 57.403 50.000 0.00 0.00 37.11 3.58
830 831 2.108168 TGGAGCAATAAGACCGCTACT 58.892 47.619 0.00 0.00 37.51 2.57
831 832 2.500098 TGGAGCAATAAGACCGCTACTT 59.500 45.455 0.00 0.00 37.51 2.24
832 833 2.866762 GGAGCAATAAGACCGCTACTTG 59.133 50.000 0.00 0.00 35.75 3.16
833 834 2.280628 AGCAATAAGACCGCTACTTGC 58.719 47.619 0.00 0.00 39.80 4.01
854 855 3.186106 TGCATACGCATGTGCACC 58.814 55.556 15.69 0.00 46.79 5.01
855 856 2.405805 TGCATACGCATGTGCACCC 61.406 57.895 15.69 1.56 46.79 4.61
856 857 2.405805 GCATACGCATGTGCACCCA 61.406 57.895 15.69 0.00 42.26 4.51
857 858 1.932011 GCATACGCATGTGCACCCAA 61.932 55.000 15.69 0.00 42.26 4.12
858 859 0.740149 CATACGCATGTGCACCCAAT 59.260 50.000 15.69 0.00 42.21 3.16
859 860 0.740149 ATACGCATGTGCACCCAATG 59.260 50.000 15.69 12.65 42.21 2.82
860 861 0.607762 TACGCATGTGCACCCAATGT 60.608 50.000 15.69 9.07 42.21 2.71
877 878 3.103289 TGTCGACACACATCGCGC 61.103 61.111 15.76 0.00 41.97 6.86
878 879 4.178255 GTCGACACACATCGCGCG 62.178 66.667 26.76 26.76 41.97 6.86
899 900 2.158871 GGGTCACGGAACCTGCATATAA 60.159 50.000 8.20 0.00 36.31 0.98
920 921 0.543749 ACAAGATCCTACCCAGCAGC 59.456 55.000 0.00 0.00 0.00 5.25
926 927 2.103143 CTACCCAGCAGCTCGTCG 59.897 66.667 0.00 0.00 0.00 5.12
947 948 3.062639 CGCACACAAACTAAGAGCCATAG 59.937 47.826 0.00 0.00 0.00 2.23
976 977 7.720957 CCCATCTCATAATTTTCAGTCATACCA 59.279 37.037 0.00 0.00 0.00 3.25
1320 1321 0.973632 TGGTGCCTAGCTTCTTCGAA 59.026 50.000 0.00 0.00 0.00 3.71
1470 1471 1.291132 GCTACATCTTCCACGGCTTC 58.709 55.000 0.00 0.00 0.00 3.86
1473 1474 2.125106 ATCTTCCACGGCTTCGGC 60.125 61.111 0.00 0.00 38.38 5.54
1515 1516 1.746991 GCACCTCTACAGGCAAGGC 60.747 63.158 0.00 0.00 45.05 4.35
1536 1537 1.078143 GCAAGAGGGGATTGCGTCT 60.078 57.895 0.00 0.00 43.15 4.18
1537 1538 1.092345 GCAAGAGGGGATTGCGTCTC 61.092 60.000 0.00 0.00 43.15 3.36
1570 1571 0.179116 CGACATCTCAGTCCTGCAGG 60.179 60.000 27.87 27.87 35.07 4.85
1575 1576 1.739562 CTCAGTCCTGCAGGCGTTC 60.740 63.158 28.91 16.83 34.44 3.95
1592 1593 0.888619 TTCGAGTGCAAGATCCTCGT 59.111 50.000 19.30 0.00 46.10 4.18
1593 1594 0.888619 TCGAGTGCAAGATCCTCGTT 59.111 50.000 19.30 0.00 46.10 3.85
1675 1676 2.668632 GGGAGTTCGACATGGCCA 59.331 61.111 8.56 8.56 0.00 5.36
2199 2200 2.507992 CCTCTGTTCGCCGAGCAG 60.508 66.667 22.82 22.82 41.21 4.24
2292 2293 2.281484 GTCCTGACCGCTGGCAAA 60.281 61.111 0.00 0.00 33.46 3.68
2372 2373 0.327867 AAGCTGATGGATGGAGGGGA 60.328 55.000 0.00 0.00 0.00 4.81
2482 2483 9.525826 ACAATTTAGAGGAATTGATTCAGTCTT 57.474 29.630 15.02 0.00 45.47 3.01
2502 2536 4.511454 TCTTGTGTCTGAAAATTCGACTGG 59.489 41.667 14.48 6.71 34.32 4.00
2521 2555 1.768870 GGGCAGTCTTAGCTAATGGGA 59.231 52.381 6.64 0.00 0.00 4.37
2531 2565 9.775539 AGTCTTAGCTAATGGGATGAGAATATA 57.224 33.333 6.64 0.00 0.00 0.86
2714 3056 0.680061 AAGTGTCTGAAGTCCGACCC 59.320 55.000 0.00 0.00 0.00 4.46
2715 3057 0.469331 AGTGTCTGAAGTCCGACCCA 60.469 55.000 0.00 0.00 0.00 4.51
2719 3061 0.112606 TCTGAAGTCCGACCCACTCT 59.887 55.000 0.00 0.00 0.00 3.24
2720 3062 0.528470 CTGAAGTCCGACCCACTCTC 59.472 60.000 0.00 0.00 0.00 3.20
2721 3063 0.178973 TGAAGTCCGACCCACTCTCA 60.179 55.000 0.00 0.00 0.00 3.27
2730 3072 2.673833 GACCCACTCTCACACTAAACG 58.326 52.381 0.00 0.00 0.00 3.60
2733 3075 3.255149 ACCCACTCTCACACTAAACGTAG 59.745 47.826 0.00 0.00 0.00 3.51
2738 3080 0.244450 TCACACTAAACGTAGGGGCG 59.756 55.000 0.00 0.00 34.75 6.13
2771 3113 4.378978 CGAAGCAAATCACCCGTGAAAATA 60.379 41.667 0.91 0.00 43.58 1.40
2782 3124 7.051623 TCACCCGTGAAAATATAATAGCAAGT 58.948 34.615 0.00 0.00 36.53 3.16
2855 3197 9.772973 ACGAGAAGTGCCACATTTATATTAATA 57.227 29.630 0.00 0.00 0.00 0.98
2891 3233 4.440880 ACAGCAAATGTAGCATCTCTCTC 58.559 43.478 0.00 0.00 41.60 3.20
2892 3234 4.081254 ACAGCAAATGTAGCATCTCTCTCA 60.081 41.667 0.00 0.00 41.60 3.27
2952 3296 4.285863 TGAAACACTCCCAACAAAGGAAT 58.714 39.130 0.00 0.00 31.49 3.01
2975 3319 9.813446 GAATTATGCAGAAAAATCCTTCTTCAT 57.187 29.630 0.00 4.38 40.74 2.57
3019 3364 0.661020 CAAAAACTTCGACCACCGCT 59.339 50.000 0.00 0.00 38.37 5.52
3020 3365 0.661020 AAAAACTTCGACCACCGCTG 59.339 50.000 0.00 0.00 38.37 5.18
3023 3368 2.432628 CTTCGACCACCGCTGTCC 60.433 66.667 0.00 0.00 38.37 4.02
3030 3375 4.003788 CACCGCTGTCCCCGAAGT 62.004 66.667 0.00 0.00 0.00 3.01
3068 3413 1.968493 AGAAACGGTCTCCACTAAGCA 59.032 47.619 0.00 0.00 0.00 3.91
3078 3423 5.010617 GGTCTCCACTAAGCAAAAATCCAAA 59.989 40.000 0.00 0.00 0.00 3.28
3084 3429 8.043710 TCCACTAAGCAAAAATCCAAAAGAAAA 58.956 29.630 0.00 0.00 0.00 2.29
3089 3434 7.030075 AGCAAAAATCCAAAAGAAAACCATG 57.970 32.000 0.00 0.00 0.00 3.66
3090 3435 5.686841 GCAAAAATCCAAAAGAAAACCATGC 59.313 36.000 0.00 0.00 0.00 4.06
3091 3436 6.459985 GCAAAAATCCAAAAGAAAACCATGCT 60.460 34.615 0.00 0.00 0.00 3.79
3092 3437 6.622833 AAAATCCAAAAGAAAACCATGCTG 57.377 33.333 0.00 0.00 0.00 4.41
3093 3438 5.549742 AATCCAAAAGAAAACCATGCTGA 57.450 34.783 0.00 0.00 0.00 4.26
3094 3439 5.549742 ATCCAAAAGAAAACCATGCTGAA 57.450 34.783 0.00 0.00 0.00 3.02
3095 3440 5.350504 TCCAAAAGAAAACCATGCTGAAA 57.649 34.783 0.00 0.00 0.00 2.69
3096 3441 5.927819 TCCAAAAGAAAACCATGCTGAAAT 58.072 33.333 0.00 0.00 0.00 2.17
3097 3442 6.355747 TCCAAAAGAAAACCATGCTGAAATT 58.644 32.000 0.00 0.00 0.00 1.82
3098 3443 6.827762 TCCAAAAGAAAACCATGCTGAAATTT 59.172 30.769 0.00 0.00 0.00 1.82
3099 3444 6.913673 CCAAAAGAAAACCATGCTGAAATTTG 59.086 34.615 0.00 0.00 0.00 2.32
3100 3445 7.201714 CCAAAAGAAAACCATGCTGAAATTTGA 60.202 33.333 0.00 0.00 0.00 2.69
3101 3446 7.486802 AAAGAAAACCATGCTGAAATTTGAG 57.513 32.000 0.00 0.00 0.00 3.02
3102 3447 6.409524 AGAAAACCATGCTGAAATTTGAGA 57.590 33.333 9.00 0.00 0.00 3.27
3103 3448 7.001099 AGAAAACCATGCTGAAATTTGAGAT 57.999 32.000 9.00 0.00 0.00 2.75
3104 3449 6.872020 AGAAAACCATGCTGAAATTTGAGATG 59.128 34.615 9.00 8.90 0.00 2.90
3105 3450 4.730949 ACCATGCTGAAATTTGAGATGG 57.269 40.909 22.31 22.31 35.90 3.51
3106 3451 3.449737 ACCATGCTGAAATTTGAGATGGG 59.550 43.478 24.98 17.35 34.39 4.00
3107 3452 3.454375 CATGCTGAAATTTGAGATGGGC 58.546 45.455 9.00 0.00 0.00 5.36
3108 3453 2.811410 TGCTGAAATTTGAGATGGGCT 58.189 42.857 9.00 0.00 0.00 5.19
3109 3454 3.966979 TGCTGAAATTTGAGATGGGCTA 58.033 40.909 9.00 0.00 0.00 3.93
3110 3455 4.539726 TGCTGAAATTTGAGATGGGCTAT 58.460 39.130 9.00 0.00 0.00 2.97
3111 3456 5.693961 TGCTGAAATTTGAGATGGGCTATA 58.306 37.500 9.00 0.00 0.00 1.31
3112 3457 5.766670 TGCTGAAATTTGAGATGGGCTATAG 59.233 40.000 9.00 0.00 0.00 1.31
3113 3458 5.182760 GCTGAAATTTGAGATGGGCTATAGG 59.817 44.000 9.00 0.00 0.00 2.57
3114 3459 6.266131 TGAAATTTGAGATGGGCTATAGGT 57.734 37.500 1.04 0.00 0.00 3.08
3115 3460 6.064060 TGAAATTTGAGATGGGCTATAGGTG 58.936 40.000 1.04 0.00 0.00 4.00
3116 3461 5.912149 AATTTGAGATGGGCTATAGGTGA 57.088 39.130 1.04 0.00 0.00 4.02
3117 3462 6.460103 AATTTGAGATGGGCTATAGGTGAT 57.540 37.500 1.04 0.00 0.00 3.06
3118 3463 4.897509 TTGAGATGGGCTATAGGTGATG 57.102 45.455 1.04 0.00 0.00 3.07
3119 3464 3.176411 TGAGATGGGCTATAGGTGATGG 58.824 50.000 1.04 0.00 0.00 3.51
3120 3465 2.503356 GAGATGGGCTATAGGTGATGGG 59.497 54.545 1.04 0.00 0.00 4.00
3121 3466 1.561542 GATGGGCTATAGGTGATGGGG 59.438 57.143 1.04 0.00 0.00 4.96
3122 3467 0.270699 TGGGCTATAGGTGATGGGGT 59.729 55.000 1.04 0.00 0.00 4.95
3123 3468 1.346046 TGGGCTATAGGTGATGGGGTT 60.346 52.381 1.04 0.00 0.00 4.11
3124 3469 2.089868 TGGGCTATAGGTGATGGGGTTA 60.090 50.000 1.04 0.00 0.00 2.85
3125 3470 3.190439 GGGCTATAGGTGATGGGGTTAT 58.810 50.000 1.04 0.00 0.00 1.89
3126 3471 3.054361 GGGCTATAGGTGATGGGGTTATG 60.054 52.174 1.04 0.00 0.00 1.90
3127 3472 3.587506 GGCTATAGGTGATGGGGTTATGT 59.412 47.826 1.04 0.00 0.00 2.29
3128 3473 4.781087 GGCTATAGGTGATGGGGTTATGTA 59.219 45.833 1.04 0.00 0.00 2.29
3129 3474 5.338137 GGCTATAGGTGATGGGGTTATGTAC 60.338 48.000 1.04 0.00 0.00 2.90
3130 3475 5.338137 GCTATAGGTGATGGGGTTATGTACC 60.338 48.000 1.04 0.00 46.99 3.34
3131 3476 3.145559 AGGTGATGGGGTTATGTACCT 57.854 47.619 0.00 0.00 46.86 3.08
3132 3477 4.289837 AGGTGATGGGGTTATGTACCTA 57.710 45.455 0.00 0.00 46.86 3.08
3133 3478 4.232091 AGGTGATGGGGTTATGTACCTAG 58.768 47.826 0.00 0.00 46.86 3.02
3134 3479 3.326880 GGTGATGGGGTTATGTACCTAGG 59.673 52.174 7.41 7.41 46.86 3.02
3135 3480 3.326880 GTGATGGGGTTATGTACCTAGGG 59.673 52.174 14.81 0.00 46.86 3.53
3136 3481 3.050876 TGATGGGGTTATGTACCTAGGGT 60.051 47.826 14.81 1.17 46.86 4.34
3137 3482 4.172441 TGATGGGGTTATGTACCTAGGGTA 59.828 45.833 14.81 0.12 46.86 3.69
3138 3483 4.203342 TGGGGTTATGTACCTAGGGTAG 57.797 50.000 14.81 0.00 46.86 3.18
3148 3493 1.718280 CCTAGGGTAGGGTCATGGAC 58.282 60.000 0.00 0.00 42.42 4.02
3167 3512 4.321718 GGACCTGTTCCAAGTAACTTACC 58.678 47.826 0.00 0.00 45.10 2.85
3168 3513 4.321718 GACCTGTTCCAAGTAACTTACCC 58.678 47.826 0.00 0.00 0.00 3.69
3169 3514 3.073503 ACCTGTTCCAAGTAACTTACCCC 59.926 47.826 0.00 0.00 0.00 4.95
3170 3515 3.073356 CCTGTTCCAAGTAACTTACCCCA 59.927 47.826 0.00 0.00 0.00 4.96
3171 3516 4.446600 CCTGTTCCAAGTAACTTACCCCAA 60.447 45.833 0.00 0.00 0.00 4.12
3172 3517 4.721132 TGTTCCAAGTAACTTACCCCAAG 58.279 43.478 0.00 0.00 40.38 3.61
3173 3518 4.412858 TGTTCCAAGTAACTTACCCCAAGA 59.587 41.667 0.00 0.00 37.71 3.02
3174 3519 4.628963 TCCAAGTAACTTACCCCAAGAC 57.371 45.455 0.00 0.00 37.71 3.01
3175 3520 3.975312 TCCAAGTAACTTACCCCAAGACA 59.025 43.478 0.00 0.00 37.71 3.41
3176 3521 4.600111 TCCAAGTAACTTACCCCAAGACAT 59.400 41.667 0.00 0.00 37.71 3.06
3177 3522 4.941873 CCAAGTAACTTACCCCAAGACATC 59.058 45.833 0.00 0.00 37.71 3.06
3178 3523 4.838904 AGTAACTTACCCCAAGACATCC 57.161 45.455 0.00 0.00 37.71 3.51
3179 3524 4.436079 AGTAACTTACCCCAAGACATCCT 58.564 43.478 0.00 0.00 37.71 3.24
3180 3525 4.850386 AGTAACTTACCCCAAGACATCCTT 59.150 41.667 0.00 0.00 37.71 3.36
3181 3526 6.027482 AGTAACTTACCCCAAGACATCCTTA 58.973 40.000 0.00 0.00 37.71 2.69
3182 3527 5.437191 AACTTACCCCAAGACATCCTTAG 57.563 43.478 0.00 0.00 37.71 2.18
3183 3528 4.695606 ACTTACCCCAAGACATCCTTAGA 58.304 43.478 0.00 0.00 37.71 2.10
3184 3529 5.098663 ACTTACCCCAAGACATCCTTAGAA 58.901 41.667 0.00 0.00 37.71 2.10
3185 3530 5.189934 ACTTACCCCAAGACATCCTTAGAAG 59.810 44.000 0.00 0.00 37.71 2.85
3186 3531 3.803340 ACCCCAAGACATCCTTAGAAGA 58.197 45.455 0.00 0.00 32.86 2.87
3187 3532 3.777522 ACCCCAAGACATCCTTAGAAGAG 59.222 47.826 0.00 0.00 32.86 2.85
3188 3533 3.135530 CCCCAAGACATCCTTAGAAGAGG 59.864 52.174 0.00 0.00 38.20 3.69
3189 3534 3.777522 CCCAAGACATCCTTAGAAGAGGT 59.222 47.826 0.00 0.00 38.04 3.85
3190 3535 4.141824 CCCAAGACATCCTTAGAAGAGGTC 60.142 50.000 0.00 0.00 43.55 3.85
3191 3536 4.440802 CCAAGACATCCTTAGAAGAGGTCG 60.441 50.000 0.56 0.00 46.73 4.79
3192 3537 2.691011 AGACATCCTTAGAAGAGGTCGC 59.309 50.000 0.56 0.00 46.73 5.19
3193 3538 1.757699 ACATCCTTAGAAGAGGTCGCC 59.242 52.381 0.00 0.00 38.04 5.54
3194 3539 2.035632 CATCCTTAGAAGAGGTCGCCT 58.964 52.381 0.00 0.00 38.04 5.52
3195 3540 2.233305 TCCTTAGAAGAGGTCGCCTT 57.767 50.000 0.00 0.00 38.04 4.35
3196 3541 2.100989 TCCTTAGAAGAGGTCGCCTTC 58.899 52.381 0.00 0.00 40.10 3.46
3197 3542 1.137282 CCTTAGAAGAGGTCGCCTTCC 59.863 57.143 0.00 0.00 40.54 3.46
3198 3543 1.825474 CTTAGAAGAGGTCGCCTTCCA 59.175 52.381 0.00 0.00 40.54 3.53
3199 3544 1.475403 TAGAAGAGGTCGCCTTCCAG 58.525 55.000 0.00 0.00 40.54 3.86
3200 3545 0.543174 AGAAGAGGTCGCCTTCCAGT 60.543 55.000 0.00 0.00 40.54 4.00
3201 3546 0.108567 GAAGAGGTCGCCTTCCAGTC 60.109 60.000 0.00 0.00 35.26 3.51
3202 3547 1.878656 AAGAGGTCGCCTTCCAGTCG 61.879 60.000 0.00 0.00 31.76 4.18
3203 3548 2.282958 AGGTCGCCTTCCAGTCGA 60.283 61.111 0.00 0.00 0.00 4.20
3205 3550 2.126031 GTCGCCTTCCAGTCGACC 60.126 66.667 13.01 0.00 44.62 4.79
3206 3551 2.599281 TCGCCTTCCAGTCGACCA 60.599 61.111 13.01 0.00 0.00 4.02
3207 3552 2.204461 TCGCCTTCCAGTCGACCAA 61.204 57.895 13.01 1.85 0.00 3.67
3208 3553 1.079127 CGCCTTCCAGTCGACCAAT 60.079 57.895 13.01 0.00 0.00 3.16
3209 3554 1.361668 CGCCTTCCAGTCGACCAATG 61.362 60.000 13.01 3.93 0.00 2.82
3210 3555 0.036388 GCCTTCCAGTCGACCAATGA 60.036 55.000 13.01 0.62 0.00 2.57
3211 3556 2.009042 GCCTTCCAGTCGACCAATGAG 61.009 57.143 13.01 4.36 0.00 2.90
3212 3557 1.406069 CCTTCCAGTCGACCAATGAGG 60.406 57.143 13.01 9.82 45.67 3.86
3213 3558 1.550524 CTTCCAGTCGACCAATGAGGA 59.449 52.381 13.01 7.58 41.22 3.71
3214 3559 0.895530 TCCAGTCGACCAATGAGGAC 59.104 55.000 13.01 0.00 41.22 3.85
3215 3560 0.608130 CCAGTCGACCAATGAGGACA 59.392 55.000 13.01 0.00 41.22 4.02
3216 3561 1.673033 CCAGTCGACCAATGAGGACAC 60.673 57.143 13.01 0.00 41.22 3.67
3217 3562 1.000843 CAGTCGACCAATGAGGACACA 59.999 52.381 13.01 0.00 41.22 3.72
3218 3563 1.000955 AGTCGACCAATGAGGACACAC 59.999 52.381 13.01 0.00 41.22 3.82
3219 3564 1.000955 GTCGACCAATGAGGACACACT 59.999 52.381 3.51 0.00 41.22 3.55
3220 3565 1.272490 TCGACCAATGAGGACACACTC 59.728 52.381 0.00 0.00 41.22 3.51
3221 3566 1.714794 GACCAATGAGGACACACTCG 58.285 55.000 0.00 0.00 41.22 4.18
3222 3567 1.272490 GACCAATGAGGACACACTCGA 59.728 52.381 0.00 0.00 41.22 4.04
3223 3568 1.000955 ACCAATGAGGACACACTCGAC 59.999 52.381 0.00 0.00 41.22 4.20
3224 3569 1.273606 CCAATGAGGACACACTCGACT 59.726 52.381 0.00 0.00 41.22 4.18
3225 3570 2.332104 CAATGAGGACACACTCGACTG 58.668 52.381 0.00 0.00 40.39 3.51
3226 3571 0.891373 ATGAGGACACACTCGACTGG 59.109 55.000 0.00 0.00 40.39 4.00
3227 3572 1.080434 GAGGACACACTCGACTGGC 60.080 63.158 0.00 0.00 0.00 4.85
3228 3573 2.048127 GGACACACTCGACTGGCC 60.048 66.667 0.00 0.00 0.00 5.36
3229 3574 2.574955 GGACACACTCGACTGGCCT 61.575 63.158 3.32 0.00 32.05 5.19
3230 3575 1.373497 GACACACTCGACTGGCCTG 60.373 63.158 8.29 8.29 0.00 4.85
3231 3576 1.806461 GACACACTCGACTGGCCTGA 61.806 60.000 17.64 1.94 0.00 3.86
3232 3577 1.367471 CACACTCGACTGGCCTGAA 59.633 57.895 17.64 0.48 0.00 3.02
3233 3578 0.668706 CACACTCGACTGGCCTGAAG 60.669 60.000 17.64 12.30 0.00 3.02
3234 3579 1.079543 CACTCGACTGGCCTGAAGG 60.080 63.158 17.64 4.92 38.53 3.46
3235 3580 1.228894 ACTCGACTGGCCTGAAGGA 60.229 57.895 17.64 8.92 37.39 3.36
3236 3581 1.216710 CTCGACTGGCCTGAAGGAC 59.783 63.158 17.64 0.00 45.93 3.85
3237 3582 1.228894 TCGACTGGCCTGAAGGACT 60.229 57.895 17.64 0.00 45.91 3.85
3238 3583 1.216710 CGACTGGCCTGAAGGACTC 59.783 63.158 17.64 1.06 45.91 3.36
3239 3584 1.216710 GACTGGCCTGAAGGACTCG 59.783 63.158 17.64 0.00 45.91 4.18
3240 3585 1.228894 ACTGGCCTGAAGGACTCGA 60.229 57.895 17.64 0.00 45.91 4.04
3241 3586 1.216710 CTGGCCTGAAGGACTCGAC 59.783 63.158 3.32 0.00 45.91 4.20
3242 3587 2.232298 CTGGCCTGAAGGACTCGACC 62.232 65.000 3.32 0.00 45.91 4.79
3243 3588 2.283529 GGCCTGAAGGACTCGACCA 61.284 63.158 0.00 0.00 41.12 4.02
3244 3589 1.079750 GCCTGAAGGACTCGACCAC 60.080 63.158 0.00 0.00 37.39 4.16
3245 3590 1.213013 CCTGAAGGACTCGACCACG 59.787 63.158 0.00 0.00 37.39 4.94
3246 3591 1.241990 CCTGAAGGACTCGACCACGA 61.242 60.000 0.00 0.00 41.24 4.35
3247 3592 2.756731 CCTGAAGGACTCGACCACGAA 61.757 57.143 0.00 0.00 42.23 3.85
3248 3593 4.586815 CCTGAAGGACTCGACCACGAAG 62.587 59.091 0.00 0.00 42.23 3.79
3255 3600 3.016997 TCGACCACGAAGACTCACT 57.983 52.632 0.00 0.00 45.74 3.41
3256 3601 0.873054 TCGACCACGAAGACTCACTC 59.127 55.000 0.00 0.00 45.74 3.51
3257 3602 0.452950 CGACCACGAAGACTCACTCG 60.453 60.000 0.00 0.00 42.66 4.18
3258 3603 0.873054 GACCACGAAGACTCACTCGA 59.127 55.000 2.16 0.00 0.00 4.04
3259 3604 0.592148 ACCACGAAGACTCACTCGAC 59.408 55.000 2.16 0.00 0.00 4.20
3260 3605 0.109689 CCACGAAGACTCACTCGACC 60.110 60.000 2.16 0.00 0.00 4.79
3261 3606 0.591659 CACGAAGACTCACTCGACCA 59.408 55.000 2.16 0.00 0.00 4.02
3262 3607 0.592148 ACGAAGACTCACTCGACCAC 59.408 55.000 2.16 0.00 0.00 4.16
3263 3608 0.109689 CGAAGACTCACTCGACCACC 60.110 60.000 0.00 0.00 0.00 4.61
3264 3609 0.959553 GAAGACTCACTCGACCACCA 59.040 55.000 0.00 0.00 0.00 4.17
3265 3610 0.962489 AAGACTCACTCGACCACCAG 59.038 55.000 0.00 0.00 0.00 4.00
3266 3611 0.896019 AGACTCACTCGACCACCAGG 60.896 60.000 0.00 0.00 42.21 4.45
3267 3612 0.894184 GACTCACTCGACCACCAGGA 60.894 60.000 0.00 0.00 38.69 3.86
3268 3613 0.896019 ACTCACTCGACCACCAGGAG 60.896 60.000 0.00 0.00 38.69 3.69
3269 3614 1.599606 CTCACTCGACCACCAGGAGG 61.600 65.000 0.33 0.33 38.69 4.30
3279 3624 3.811702 CCAGGAGGTCAAGAGGCA 58.188 61.111 0.00 0.00 0.00 4.75
3280 3625 1.601171 CCAGGAGGTCAAGAGGCAG 59.399 63.158 0.00 0.00 0.00 4.85
3281 3626 1.197430 CCAGGAGGTCAAGAGGCAGT 61.197 60.000 0.00 0.00 0.00 4.40
3282 3627 0.248843 CAGGAGGTCAAGAGGCAGTC 59.751 60.000 0.00 0.00 0.00 3.51
3283 3628 0.116143 AGGAGGTCAAGAGGCAGTCT 59.884 55.000 0.00 0.00 36.94 3.24
3284 3629 0.248843 GGAGGTCAAGAGGCAGTCTG 59.751 60.000 0.00 0.00 34.84 3.51
3285 3630 0.390998 GAGGTCAAGAGGCAGTCTGC 60.391 60.000 16.93 16.93 44.08 4.26
3295 3640 2.941333 CAGTCTGCACTGCAACGG 59.059 61.111 4.99 4.07 43.77 4.44
3296 3641 2.974698 AGTCTGCACTGCAACGGC 60.975 61.111 4.99 0.00 38.41 5.68
3297 3642 4.030452 GTCTGCACTGCAACGGCC 62.030 66.667 4.99 0.00 38.41 6.13
3298 3643 4.254709 TCTGCACTGCAACGGCCT 62.255 61.111 4.99 0.00 38.41 5.19
3299 3644 4.034258 CTGCACTGCAACGGCCTG 62.034 66.667 4.99 0.00 38.41 4.85
3300 3645 4.873810 TGCACTGCAACGGCCTGT 62.874 61.111 0.00 0.00 40.13 4.00
3301 3646 2.668212 GCACTGCAACGGCCTGTA 60.668 61.111 0.00 0.00 40.13 2.74
3302 3647 2.258013 GCACTGCAACGGCCTGTAA 61.258 57.895 0.00 0.00 40.13 2.41
3303 3648 1.586154 GCACTGCAACGGCCTGTAAT 61.586 55.000 0.00 0.00 40.13 1.89
3304 3649 0.447801 CACTGCAACGGCCTGTAATC 59.552 55.000 0.00 0.00 40.13 1.75
3305 3650 0.036164 ACTGCAACGGCCTGTAATCA 59.964 50.000 0.00 0.00 40.13 2.57
3306 3651 1.164411 CTGCAACGGCCTGTAATCAA 58.836 50.000 0.00 0.00 40.13 2.57
3307 3652 1.131126 CTGCAACGGCCTGTAATCAAG 59.869 52.381 0.00 0.00 40.13 3.02
3308 3653 1.165270 GCAACGGCCTGTAATCAAGT 58.835 50.000 0.00 0.00 0.00 3.16
3309 3654 2.289756 TGCAACGGCCTGTAATCAAGTA 60.290 45.455 0.00 0.00 40.13 2.24
3310 3655 2.351726 GCAACGGCCTGTAATCAAGTAG 59.648 50.000 0.00 0.00 0.00 2.57
3311 3656 3.857052 CAACGGCCTGTAATCAAGTAGA 58.143 45.455 0.00 0.00 0.00 2.59
3312 3657 3.521947 ACGGCCTGTAATCAAGTAGAC 57.478 47.619 0.00 0.00 0.00 2.59
3313 3658 3.097614 ACGGCCTGTAATCAAGTAGACT 58.902 45.455 0.00 0.00 0.00 3.24
3314 3659 3.514309 ACGGCCTGTAATCAAGTAGACTT 59.486 43.478 0.00 0.00 36.45 3.01
3315 3660 4.020485 ACGGCCTGTAATCAAGTAGACTTT 60.020 41.667 0.00 0.00 33.11 2.66
3316 3661 5.186409 ACGGCCTGTAATCAAGTAGACTTTA 59.814 40.000 0.00 0.00 33.11 1.85
3317 3662 6.127140 ACGGCCTGTAATCAAGTAGACTTTAT 60.127 38.462 0.00 0.00 33.11 1.40
3318 3663 6.201044 CGGCCTGTAATCAAGTAGACTTTATG 59.799 42.308 0.00 0.00 33.11 1.90
3319 3664 7.272978 GGCCTGTAATCAAGTAGACTTTATGA 58.727 38.462 0.00 0.00 33.11 2.15
3320 3665 7.934120 GGCCTGTAATCAAGTAGACTTTATGAT 59.066 37.037 0.00 0.00 33.11 2.45
3321 3666 9.982651 GCCTGTAATCAAGTAGACTTTATGATA 57.017 33.333 0.00 0.00 33.11 2.15
3343 3688 4.764143 AGGCACTTTATGTGGGGC 57.236 55.556 0.56 0.00 46.27 5.80
3344 3689 1.378514 AGGCACTTTATGTGGGGCG 60.379 57.895 0.56 0.00 46.27 6.13
3345 3690 1.677633 GGCACTTTATGTGGGGCGT 60.678 57.895 0.56 0.00 46.27 5.68
3346 3691 1.248101 GGCACTTTATGTGGGGCGTT 61.248 55.000 0.56 0.00 46.27 4.84
3347 3692 1.455248 GCACTTTATGTGGGGCGTTA 58.545 50.000 0.56 0.00 46.27 3.18
3348 3693 1.131693 GCACTTTATGTGGGGCGTTAC 59.868 52.381 0.56 0.00 46.27 2.50
3349 3694 1.741145 CACTTTATGTGGGGCGTTACC 59.259 52.381 0.00 0.00 42.68 2.85
3350 3695 1.351683 ACTTTATGTGGGGCGTTACCA 59.648 47.619 0.00 0.00 42.05 3.25
3351 3696 2.014128 CTTTATGTGGGGCGTTACCAG 58.986 52.381 0.00 0.00 42.05 4.00
3352 3697 0.985760 TTATGTGGGGCGTTACCAGT 59.014 50.000 0.00 0.00 42.05 4.00
3353 3698 1.863325 TATGTGGGGCGTTACCAGTA 58.137 50.000 0.00 0.00 42.05 2.74
3354 3699 0.985760 ATGTGGGGCGTTACCAGTAA 59.014 50.000 0.00 0.00 42.05 2.24
3355 3700 0.035176 TGTGGGGCGTTACCAGTAAC 59.965 55.000 10.09 10.09 42.05 2.50
3362 3707 3.148340 GTTACCAGTAACGCCCCAG 57.852 57.895 5.02 0.00 36.47 4.45
3363 3708 0.609662 GTTACCAGTAACGCCCCAGA 59.390 55.000 5.02 0.00 36.47 3.86
3364 3709 0.609662 TTACCAGTAACGCCCCAGAC 59.390 55.000 0.00 0.00 0.00 3.51
3365 3710 0.251922 TACCAGTAACGCCCCAGACT 60.252 55.000 0.00 0.00 0.00 3.24
3366 3711 1.125711 ACCAGTAACGCCCCAGACTT 61.126 55.000 0.00 0.00 0.00 3.01
3367 3712 0.899720 CCAGTAACGCCCCAGACTTA 59.100 55.000 0.00 0.00 0.00 2.24
3368 3713 1.276989 CCAGTAACGCCCCAGACTTAA 59.723 52.381 0.00 0.00 0.00 1.85
3369 3714 2.344025 CAGTAACGCCCCAGACTTAAC 58.656 52.381 0.00 0.00 0.00 2.01
3370 3715 2.028385 CAGTAACGCCCCAGACTTAACT 60.028 50.000 0.00 0.00 0.00 2.24
3371 3716 2.233186 AGTAACGCCCCAGACTTAACTC 59.767 50.000 0.00 0.00 0.00 3.01
3372 3717 1.053424 AACGCCCCAGACTTAACTCA 58.947 50.000 0.00 0.00 0.00 3.41
3373 3718 0.320697 ACGCCCCAGACTTAACTCAC 59.679 55.000 0.00 0.00 0.00 3.51
3374 3719 0.391263 CGCCCCAGACTTAACTCACC 60.391 60.000 0.00 0.00 0.00 4.02
3375 3720 0.984995 GCCCCAGACTTAACTCACCT 59.015 55.000 0.00 0.00 0.00 4.00
3376 3721 1.351350 GCCCCAGACTTAACTCACCTT 59.649 52.381 0.00 0.00 0.00 3.50
3377 3722 2.570302 GCCCCAGACTTAACTCACCTTA 59.430 50.000 0.00 0.00 0.00 2.69
3378 3723 3.008704 GCCCCAGACTTAACTCACCTTAA 59.991 47.826 0.00 0.00 0.00 1.85
3379 3724 4.506095 GCCCCAGACTTAACTCACCTTAAA 60.506 45.833 0.00 0.00 0.00 1.52
3380 3725 5.001874 CCCCAGACTTAACTCACCTTAAAC 58.998 45.833 0.00 0.00 0.00 2.01
3381 3726 5.001874 CCCAGACTTAACTCACCTTAAACC 58.998 45.833 0.00 0.00 0.00 3.27
3382 3727 5.001874 CCAGACTTAACTCACCTTAAACCC 58.998 45.833 0.00 0.00 0.00 4.11
3383 3728 5.221864 CCAGACTTAACTCACCTTAAACCCT 60.222 44.000 0.00 0.00 0.00 4.34
3384 3729 5.932883 CAGACTTAACTCACCTTAAACCCTC 59.067 44.000 0.00 0.00 0.00 4.30
3385 3730 5.845065 AGACTTAACTCACCTTAAACCCTCT 59.155 40.000 0.00 0.00 0.00 3.69
3386 3731 6.014413 AGACTTAACTCACCTTAAACCCTCTC 60.014 42.308 0.00 0.00 0.00 3.20
3387 3732 5.012871 ACTTAACTCACCTTAAACCCTCTCC 59.987 44.000 0.00 0.00 0.00 3.71
3388 3733 3.277416 ACTCACCTTAAACCCTCTCCT 57.723 47.619 0.00 0.00 0.00 3.69
3389 3734 2.907042 ACTCACCTTAAACCCTCTCCTG 59.093 50.000 0.00 0.00 0.00 3.86
3390 3735 1.628846 TCACCTTAAACCCTCTCCTGC 59.371 52.381 0.00 0.00 0.00 4.85
3391 3736 0.613777 ACCTTAAACCCTCTCCTGCG 59.386 55.000 0.00 0.00 0.00 5.18
3392 3737 0.613777 CCTTAAACCCTCTCCTGCGT 59.386 55.000 0.00 0.00 0.00 5.24
3393 3738 1.676014 CCTTAAACCCTCTCCTGCGTG 60.676 57.143 0.00 0.00 0.00 5.34
3394 3739 0.323629 TTAAACCCTCTCCTGCGTGG 59.676 55.000 0.00 0.00 37.10 4.94
3395 3740 1.550130 TAAACCCTCTCCTGCGTGGG 61.550 60.000 0.00 0.00 44.89 4.61
3398 3743 4.463879 CCTCTCCTGCGTGGGCTG 62.464 72.222 0.00 0.00 40.82 4.85
3404 3749 4.845580 CTGCGTGGGCTGGCTAGG 62.846 72.222 0.00 1.58 40.82 3.02
3407 3752 4.162690 CGTGGGCTGGCTAGGGTC 62.163 72.222 0.00 0.00 0.00 4.46
3408 3753 3.798511 GTGGGCTGGCTAGGGTCC 61.799 72.222 0.00 0.00 0.00 4.46
3409 3754 4.024984 TGGGCTGGCTAGGGTCCT 62.025 66.667 0.00 0.00 0.00 3.85
3410 3755 3.483869 GGGCTGGCTAGGGTCCTG 61.484 72.222 0.00 0.00 0.00 3.86
3411 3756 3.483869 GGCTGGCTAGGGTCCTGG 61.484 72.222 0.00 0.00 0.00 4.45
3416 3761 4.840005 GCTAGGGTCCTGGCGCAC 62.840 72.222 10.83 0.00 40.50 5.34
3417 3762 3.077556 CTAGGGTCCTGGCGCACT 61.078 66.667 10.83 3.67 0.00 4.40
3418 3763 3.075005 TAGGGTCCTGGCGCACTC 61.075 66.667 10.83 0.00 0.00 3.51
3419 3764 3.602075 TAGGGTCCTGGCGCACTCT 62.602 63.158 10.83 6.46 0.00 3.24
3420 3765 2.219449 TAGGGTCCTGGCGCACTCTA 62.219 60.000 10.83 5.27 0.00 2.43
3421 3766 2.435693 GGGTCCTGGCGCACTCTAT 61.436 63.158 10.83 0.00 0.00 1.98
3422 3767 1.113517 GGGTCCTGGCGCACTCTATA 61.114 60.000 10.83 0.00 0.00 1.31
3423 3768 0.969894 GGTCCTGGCGCACTCTATAT 59.030 55.000 10.83 0.00 0.00 0.86
3424 3769 2.168496 GGTCCTGGCGCACTCTATATA 58.832 52.381 10.83 0.00 0.00 0.86
3425 3770 2.561419 GGTCCTGGCGCACTCTATATAA 59.439 50.000 10.83 0.00 0.00 0.98
3426 3771 3.367498 GGTCCTGGCGCACTCTATATAAG 60.367 52.174 10.83 0.00 0.00 1.73
3427 3772 2.231478 TCCTGGCGCACTCTATATAAGC 59.769 50.000 10.83 0.00 0.00 3.09
3428 3773 2.611518 CTGGCGCACTCTATATAAGCC 58.388 52.381 10.83 0.00 43.05 4.35
3429 3774 2.743636 GGCGCACTCTATATAAGCCA 57.256 50.000 10.83 0.00 42.37 4.75
3430 3775 2.288825 TGGCGCACTCTATATAAGCCAC 60.289 50.000 10.83 0.00 46.73 5.01
3431 3776 2.338500 GCGCACTCTATATAAGCCACC 58.662 52.381 0.30 0.00 0.00 4.61
3432 3777 2.931320 GCGCACTCTATATAAGCCACCC 60.931 54.545 0.30 0.00 0.00 4.61
3433 3778 2.563179 CGCACTCTATATAAGCCACCCT 59.437 50.000 0.00 0.00 0.00 4.34
3434 3779 3.367498 CGCACTCTATATAAGCCACCCTC 60.367 52.174 0.00 0.00 0.00 4.30
3435 3780 3.055747 GCACTCTATATAAGCCACCCTCC 60.056 52.174 0.00 0.00 0.00 4.30
3436 3781 4.421131 CACTCTATATAAGCCACCCTCCT 58.579 47.826 0.00 0.00 0.00 3.69
3437 3782 4.464597 CACTCTATATAAGCCACCCTCCTC 59.535 50.000 0.00 0.00 0.00 3.71
3438 3783 4.027437 CTCTATATAAGCCACCCTCCTCC 58.973 52.174 0.00 0.00 0.00 4.30
3439 3784 2.815357 ATATAAGCCACCCTCCTCCA 57.185 50.000 0.00 0.00 0.00 3.86
3440 3785 1.802553 TATAAGCCACCCTCCTCCAC 58.197 55.000 0.00 0.00 0.00 4.02
3441 3786 0.253160 ATAAGCCACCCTCCTCCACA 60.253 55.000 0.00 0.00 0.00 4.17
3442 3787 0.909610 TAAGCCACCCTCCTCCACAG 60.910 60.000 0.00 0.00 0.00 3.66
3443 3788 3.721706 GCCACCCTCCTCCACAGG 61.722 72.222 0.00 0.00 42.01 4.00
3444 3789 3.721706 CCACCCTCCTCCACAGGC 61.722 72.222 0.00 0.00 40.12 4.85
3445 3790 2.930019 CACCCTCCTCCACAGGCA 60.930 66.667 0.00 0.00 40.12 4.75
3446 3791 2.608988 ACCCTCCTCCACAGGCAG 60.609 66.667 0.00 0.00 40.12 4.85
3447 3792 2.284921 CCCTCCTCCACAGGCAGA 60.285 66.667 0.00 0.00 40.12 4.26
3448 3793 2.365586 CCCTCCTCCACAGGCAGAG 61.366 68.421 0.00 0.00 40.12 3.35
3451 3796 3.406200 CCTCCACAGGCAGAGGGG 61.406 72.222 0.00 0.00 45.08 4.79
3452 3797 2.608988 CTCCACAGGCAGAGGGGT 60.609 66.667 0.00 0.00 0.00 4.95
3453 3798 2.121963 TCCACAGGCAGAGGGGTT 60.122 61.111 0.00 0.00 0.00 4.11
3454 3799 2.190488 CTCCACAGGCAGAGGGGTTC 62.190 65.000 0.00 0.00 0.00 3.62
3455 3800 2.046892 CACAGGCAGAGGGGTTCG 60.047 66.667 0.00 0.00 0.00 3.95
3456 3801 3.322466 ACAGGCAGAGGGGTTCGG 61.322 66.667 0.00 0.00 0.00 4.30
3457 3802 4.785453 CAGGCAGAGGGGTTCGGC 62.785 72.222 0.00 0.00 44.98 5.54
3465 3810 2.751688 GGGGTTCGGCACCTTGTA 59.248 61.111 0.00 0.00 46.38 2.41
3466 3811 1.073548 GGGGTTCGGCACCTTGTAA 59.926 57.895 0.00 0.00 46.38 2.41
3467 3812 0.323087 GGGGTTCGGCACCTTGTAAT 60.323 55.000 0.00 0.00 46.38 1.89
3468 3813 1.541379 GGGTTCGGCACCTTGTAATT 58.459 50.000 0.00 0.00 46.38 1.40
3469 3814 1.471287 GGGTTCGGCACCTTGTAATTC 59.529 52.381 0.00 0.00 46.38 2.17
3470 3815 2.156098 GGTTCGGCACCTTGTAATTCA 58.844 47.619 0.00 0.00 43.29 2.57
3471 3816 2.752903 GGTTCGGCACCTTGTAATTCAT 59.247 45.455 0.00 0.00 43.29 2.57
3472 3817 3.942748 GGTTCGGCACCTTGTAATTCATA 59.057 43.478 0.00 0.00 43.29 2.15
3473 3818 4.201881 GGTTCGGCACCTTGTAATTCATAC 60.202 45.833 0.00 0.00 43.29 2.39
3474 3819 4.209307 TCGGCACCTTGTAATTCATACA 57.791 40.909 0.00 0.00 42.75 2.29
3475 3820 4.776349 TCGGCACCTTGTAATTCATACAT 58.224 39.130 0.00 0.00 43.84 2.29
3476 3821 5.189928 TCGGCACCTTGTAATTCATACATT 58.810 37.500 0.00 0.00 43.84 2.71
3477 3822 5.295787 TCGGCACCTTGTAATTCATACATTC 59.704 40.000 0.00 0.00 43.84 2.67
3478 3823 5.065859 CGGCACCTTGTAATTCATACATTCA 59.934 40.000 0.00 0.00 43.84 2.57
3479 3824 6.238731 CGGCACCTTGTAATTCATACATTCAT 60.239 38.462 0.00 0.00 43.84 2.57
3480 3825 7.041440 CGGCACCTTGTAATTCATACATTCATA 60.041 37.037 0.00 0.00 43.84 2.15
3481 3826 8.629158 GGCACCTTGTAATTCATACATTCATAA 58.371 33.333 0.00 0.00 43.84 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
197 198 7.532682 TTTTAGACATTTGGCAGTTCAAAAC 57.467 32.000 0.00 0.00 39.64 2.43
200 201 7.652909 CAGAATTTTAGACATTTGGCAGTTCAA 59.347 33.333 0.00 0.00 0.00 2.69
268 269 9.632807 GAGAAAGCAACTATATCATAGGTACAG 57.367 37.037 0.00 0.00 0.00 2.74
724 725 0.179258 GACGAACGAACATTCCACGC 60.179 55.000 0.14 0.00 0.00 5.34
725 726 1.415374 AGACGAACGAACATTCCACG 58.585 50.000 0.14 0.00 0.00 4.94
729 730 2.571206 GGCAAAGACGAACGAACATTC 58.429 47.619 0.14 0.00 0.00 2.67
730 731 1.265905 GGGCAAAGACGAACGAACATT 59.734 47.619 0.14 0.00 0.00 2.71
731 732 0.872388 GGGCAAAGACGAACGAACAT 59.128 50.000 0.14 0.00 0.00 2.71
732 733 0.179067 AGGGCAAAGACGAACGAACA 60.179 50.000 0.14 0.00 0.00 3.18
733 734 0.942252 AAGGGCAAAGACGAACGAAC 59.058 50.000 0.14 0.00 0.00 3.95
734 735 1.332375 CAAAGGGCAAAGACGAACGAA 59.668 47.619 0.14 0.00 0.00 3.85
735 736 0.941542 CAAAGGGCAAAGACGAACGA 59.058 50.000 0.14 0.00 0.00 3.85
736 737 0.941542 TCAAAGGGCAAAGACGAACG 59.058 50.000 0.00 0.00 0.00 3.95
737 738 2.858646 GCTTCAAAGGGCAAAGACGAAC 60.859 50.000 0.00 0.00 0.00 3.95
738 739 1.336755 GCTTCAAAGGGCAAAGACGAA 59.663 47.619 0.00 0.00 0.00 3.85
739 740 0.951558 GCTTCAAAGGGCAAAGACGA 59.048 50.000 0.00 0.00 0.00 4.20
740 741 0.039165 GGCTTCAAAGGGCAAAGACG 60.039 55.000 0.00 0.00 0.00 4.18
741 742 0.318441 GGGCTTCAAAGGGCAAAGAC 59.682 55.000 0.00 0.00 0.00 3.01
742 743 0.831711 GGGGCTTCAAAGGGCAAAGA 60.832 55.000 0.00 0.00 0.00 2.52
743 744 1.673477 GGGGCTTCAAAGGGCAAAG 59.327 57.895 0.00 0.00 0.00 2.77
744 745 2.206536 CGGGGCTTCAAAGGGCAAA 61.207 57.895 0.00 0.00 0.00 3.68
745 746 2.600173 CGGGGCTTCAAAGGGCAA 60.600 61.111 0.00 0.00 0.00 4.52
746 747 3.575247 TCGGGGCTTCAAAGGGCA 61.575 61.111 0.00 0.00 0.00 5.36
747 748 3.062466 GTCGGGGCTTCAAAGGGC 61.062 66.667 0.00 0.00 0.00 5.19
748 749 2.361230 GGTCGGGGCTTCAAAGGG 60.361 66.667 0.00 0.00 0.00 3.95
749 750 1.971695 GTGGTCGGGGCTTCAAAGG 60.972 63.158 0.00 0.00 0.00 3.11
750 751 1.971695 GGTGGTCGGGGCTTCAAAG 60.972 63.158 0.00 0.00 0.00 2.77
751 752 2.114411 GGTGGTCGGGGCTTCAAA 59.886 61.111 0.00 0.00 0.00 2.69
752 753 4.323477 CGGTGGTCGGGGCTTCAA 62.323 66.667 0.00 0.00 34.75 2.69
762 763 3.948719 TTGTCCTGGGCGGTGGTC 61.949 66.667 0.00 0.00 0.00 4.02
763 764 4.265056 GTTGTCCTGGGCGGTGGT 62.265 66.667 0.00 0.00 0.00 4.16
764 765 2.119484 TTAGTTGTCCTGGGCGGTGG 62.119 60.000 0.00 0.00 0.00 4.61
765 766 0.035439 ATTAGTTGTCCTGGGCGGTG 60.035 55.000 0.00 0.00 0.00 4.94
766 767 0.696501 AATTAGTTGTCCTGGGCGGT 59.303 50.000 0.00 0.00 0.00 5.68
767 768 1.743394 GAAATTAGTTGTCCTGGGCGG 59.257 52.381 0.00 0.00 0.00 6.13
768 769 1.743394 GGAAATTAGTTGTCCTGGGCG 59.257 52.381 0.00 0.00 0.00 6.13
769 770 3.087370 AGGAAATTAGTTGTCCTGGGC 57.913 47.619 0.00 0.00 40.37 5.36
770 771 5.437191 ACTAGGAAATTAGTTGTCCTGGG 57.563 43.478 10.27 4.68 42.65 4.45
771 772 9.110502 GATAAACTAGGAAATTAGTTGTCCTGG 57.889 37.037 5.97 5.60 41.70 4.45
772 773 9.667107 TGATAAACTAGGAAATTAGTTGTCCTG 57.333 33.333 5.97 0.28 41.70 3.86
790 791 9.358406 TGCTCCATGATTGATATTTGATAAACT 57.642 29.630 0.00 0.00 0.00 2.66
791 792 9.970395 TTGCTCCATGATTGATATTTGATAAAC 57.030 29.630 0.00 0.00 0.00 2.01
796 797 9.577222 TCTTATTGCTCCATGATTGATATTTGA 57.423 29.630 0.00 0.00 0.00 2.69
797 798 9.622004 GTCTTATTGCTCCATGATTGATATTTG 57.378 33.333 0.00 0.00 0.00 2.32
798 799 8.800332 GGTCTTATTGCTCCATGATTGATATTT 58.200 33.333 0.00 0.00 0.00 1.40
799 800 7.120285 CGGTCTTATTGCTCCATGATTGATATT 59.880 37.037 0.00 0.00 0.00 1.28
800 801 6.596888 CGGTCTTATTGCTCCATGATTGATAT 59.403 38.462 0.00 0.00 0.00 1.63
801 802 5.934043 CGGTCTTATTGCTCCATGATTGATA 59.066 40.000 0.00 0.00 0.00 2.15
802 803 4.758674 CGGTCTTATTGCTCCATGATTGAT 59.241 41.667 0.00 0.00 0.00 2.57
803 804 4.129380 CGGTCTTATTGCTCCATGATTGA 58.871 43.478 0.00 0.00 0.00 2.57
804 805 3.304257 GCGGTCTTATTGCTCCATGATTG 60.304 47.826 0.00 0.00 0.00 2.67
805 806 2.880890 GCGGTCTTATTGCTCCATGATT 59.119 45.455 0.00 0.00 0.00 2.57
806 807 2.105477 AGCGGTCTTATTGCTCCATGAT 59.895 45.455 0.00 0.00 32.44 2.45
807 808 1.486310 AGCGGTCTTATTGCTCCATGA 59.514 47.619 0.00 0.00 32.44 3.07
808 809 1.959042 AGCGGTCTTATTGCTCCATG 58.041 50.000 0.00 0.00 32.44 3.66
809 810 2.700897 AGTAGCGGTCTTATTGCTCCAT 59.299 45.455 0.00 0.00 40.06 3.41
810 811 2.108168 AGTAGCGGTCTTATTGCTCCA 58.892 47.619 0.00 0.00 40.06 3.86
811 812 2.866762 CAAGTAGCGGTCTTATTGCTCC 59.133 50.000 0.00 0.00 40.06 4.70
812 813 2.285488 GCAAGTAGCGGTCTTATTGCTC 59.715 50.000 14.74 0.00 40.06 4.26
813 814 2.280628 GCAAGTAGCGGTCTTATTGCT 58.719 47.619 14.74 0.00 42.58 3.91
814 815 2.739293 GCAAGTAGCGGTCTTATTGC 57.261 50.000 9.27 9.27 36.27 3.56
838 839 1.932011 TTGGGTGCACATGCGTATGC 61.932 55.000 20.43 1.14 45.83 3.14
839 840 0.740149 ATTGGGTGCACATGCGTATG 59.260 50.000 20.43 12.28 45.83 2.39
840 841 0.740149 CATTGGGTGCACATGCGTAT 59.260 50.000 20.43 0.00 45.83 3.06
841 842 0.607762 ACATTGGGTGCACATGCGTA 60.608 50.000 20.43 0.00 45.83 4.42
842 843 1.902918 ACATTGGGTGCACATGCGT 60.903 52.632 20.43 5.76 45.83 5.24
843 844 1.444724 CACATTGGGTGCACATGCG 60.445 57.895 20.43 4.22 45.83 4.73
844 845 4.582760 CACATTGGGTGCACATGC 57.417 55.556 20.43 0.39 41.36 4.06
860 861 3.103289 GCGCGATGTGTGTCGACA 61.103 61.111 15.76 15.76 44.06 4.35
861 862 4.178255 CGCGCGATGTGTGTCGAC 62.178 66.667 28.94 9.11 44.06 4.20
877 878 2.233605 TATGCAGGTTCCGTGACCCG 62.234 60.000 0.00 0.00 40.73 5.28
878 879 0.180406 ATATGCAGGTTCCGTGACCC 59.820 55.000 0.00 0.00 40.73 4.46
879 880 2.902705 TATATGCAGGTTCCGTGACC 57.097 50.000 0.00 0.00 40.11 4.02
880 881 4.393680 TGTTTTATATGCAGGTTCCGTGAC 59.606 41.667 0.00 0.00 0.00 3.67
881 882 4.580868 TGTTTTATATGCAGGTTCCGTGA 58.419 39.130 0.00 0.00 0.00 4.35
882 883 4.955925 TGTTTTATATGCAGGTTCCGTG 57.044 40.909 0.00 0.00 0.00 4.94
883 884 5.250200 TCTTGTTTTATATGCAGGTTCCGT 58.750 37.500 0.00 0.00 0.00 4.69
884 885 5.811399 TCTTGTTTTATATGCAGGTTCCG 57.189 39.130 0.00 0.00 0.00 4.30
885 886 6.547510 AGGATCTTGTTTTATATGCAGGTTCC 59.452 38.462 0.00 0.00 31.99 3.62
899 900 2.619074 GCTGCTGGGTAGGATCTTGTTT 60.619 50.000 0.00 0.00 0.00 2.83
920 921 2.390938 TCTTAGTTTGTGTGCGACGAG 58.609 47.619 0.00 0.00 0.00 4.18
926 927 4.003648 ACTATGGCTCTTAGTTTGTGTGC 58.996 43.478 0.00 0.00 0.00 4.57
947 948 7.630242 TGACTGAAAATTATGAGATGGGAAC 57.370 36.000 0.00 0.00 0.00 3.62
976 977 5.099575 GTGTCCACAAATTCGACAAAGTTT 58.900 37.500 0.00 0.00 38.20 2.66
1309 1310 1.876156 CTTGTTGGCTTCGAAGAAGCT 59.124 47.619 28.95 0.00 45.90 3.74
1320 1321 1.507141 CGCCGAACTTCTTGTTGGCT 61.507 55.000 14.73 0.00 43.80 4.75
1473 1474 4.139420 CAGAGCAAGGCGAACGCG 62.139 66.667 3.53 3.53 43.06 6.01
1515 1516 2.830370 GCAATCCCCTCTTGCCGG 60.830 66.667 0.00 0.00 42.47 6.13
1521 1522 3.635510 GGAGACGCAATCCCCTCT 58.364 61.111 0.00 0.00 0.00 3.69
1560 1561 3.288308 CTCGAACGCCTGCAGGACT 62.288 63.158 37.21 18.93 37.39 3.85
1570 1571 0.737715 AGGATCTTGCACTCGAACGC 60.738 55.000 0.00 0.00 0.00 4.84
2205 2206 1.135373 TCCACGATCAGCTTCTCGTTC 60.135 52.381 15.68 0.00 45.15 3.95
2271 2272 2.738521 CCAGCGGTCAGGACGTTG 60.739 66.667 0.00 0.00 41.31 4.10
2292 2293 4.479993 GCCTCTCCGCTGCCATGT 62.480 66.667 0.00 0.00 0.00 3.21
2372 2373 1.010046 TCCTCATGTCCTCCCCTTCAT 59.990 52.381 0.00 0.00 0.00 2.57
2482 2483 3.138304 CCCAGTCGAATTTTCAGACACA 58.862 45.455 13.63 0.00 35.06 3.72
2502 2536 3.071602 TCATCCCATTAGCTAAGACTGCC 59.928 47.826 12.54 0.00 0.00 4.85
2531 2565 6.208644 CAGGAACAATCGACACAAAGAAATT 58.791 36.000 0.00 0.00 0.00 1.82
2536 2570 2.290367 TGCAGGAACAATCGACACAAAG 59.710 45.455 0.00 0.00 0.00 2.77
2539 2573 1.202639 ACTGCAGGAACAATCGACACA 60.203 47.619 19.93 0.00 0.00 3.72
2540 2574 1.512926 ACTGCAGGAACAATCGACAC 58.487 50.000 19.93 0.00 0.00 3.67
2541 2575 3.610040 ATACTGCAGGAACAATCGACA 57.390 42.857 19.93 0.00 0.00 4.35
2542 2576 4.025647 GCTTATACTGCAGGAACAATCGAC 60.026 45.833 19.93 0.00 0.00 4.20
2685 2798 5.511545 GGACTTCAGACACTTGTTCAGGTAT 60.512 44.000 0.00 0.00 0.00 2.73
2714 3056 3.367087 CCCCTACGTTTAGTGTGAGAGTG 60.367 52.174 0.00 0.00 0.00 3.51
2715 3057 2.824341 CCCCTACGTTTAGTGTGAGAGT 59.176 50.000 0.00 0.00 0.00 3.24
2719 3061 0.244450 CGCCCCTACGTTTAGTGTGA 59.756 55.000 0.00 0.00 0.00 3.58
2720 3062 1.356527 GCGCCCCTACGTTTAGTGTG 61.357 60.000 0.00 0.00 34.88 3.82
2721 3063 1.079612 GCGCCCCTACGTTTAGTGT 60.080 57.895 0.00 0.00 34.88 3.55
2730 3072 4.410400 AGTTGCCTGCGCCCCTAC 62.410 66.667 4.18 0.00 0.00 3.18
2738 3080 0.242017 ATTTGCTTCGAGTTGCCTGC 59.758 50.000 5.02 0.00 0.00 4.85
2746 3088 0.443869 CACGGGTGATTTGCTTCGAG 59.556 55.000 0.00 0.00 0.00 4.04
2747 3089 0.034198 TCACGGGTGATTTGCTTCGA 59.966 50.000 0.00 0.00 34.14 3.71
2771 3113 8.421784 TCGAGTATTTTCCTCACTTGCTATTAT 58.578 33.333 0.00 0.00 0.00 1.28
2807 3149 2.897271 AATGACTGGGCCACATACAA 57.103 45.000 0.00 0.00 0.00 2.41
2862 3204 8.373981 AGAGATGCTACATTTGCTGTAATCTAT 58.626 33.333 1.01 0.00 37.74 1.98
2865 3207 6.705381 AGAGAGATGCTACATTTGCTGTAATC 59.295 38.462 0.00 0.00 39.82 1.75
2891 3233 7.550551 TGGTGTGCTATCTCTTTAGATTTCTTG 59.449 37.037 0.00 0.00 39.55 3.02
2892 3234 7.624549 TGGTGTGCTATCTCTTTAGATTTCTT 58.375 34.615 0.00 0.00 39.55 2.52
2975 3319 0.323816 TGTGTTGGTGGTTGCAGGAA 60.324 50.000 0.00 0.00 0.00 3.36
3019 3364 3.998672 GCGGACACTTCGGGGACA 61.999 66.667 0.00 0.00 0.00 4.02
3020 3365 4.754667 GGCGGACACTTCGGGGAC 62.755 72.222 0.00 0.00 0.00 4.46
3027 3372 2.032071 CCTTTCCGGCGGACACTT 59.968 61.111 31.23 0.00 0.00 3.16
3030 3375 2.167398 CTTCTCCTTTCCGGCGGACA 62.167 60.000 31.23 22.64 0.00 4.02
3068 3413 6.827762 TCAGCATGGTTTTCTTTTGGATTTTT 59.172 30.769 0.00 0.00 36.16 1.94
3078 3423 6.819284 TCTCAAATTTCAGCATGGTTTTCTT 58.181 32.000 0.00 0.00 36.16 2.52
3084 3429 3.449737 CCCATCTCAAATTTCAGCATGGT 59.550 43.478 14.67 0.00 36.16 3.55
3089 3434 5.182760 CCTATAGCCCATCTCAAATTTCAGC 59.817 44.000 0.00 0.00 0.00 4.26
3090 3435 6.206243 CACCTATAGCCCATCTCAAATTTCAG 59.794 42.308 0.00 0.00 0.00 3.02
3091 3436 6.064060 CACCTATAGCCCATCTCAAATTTCA 58.936 40.000 0.00 0.00 0.00 2.69
3092 3437 6.299141 TCACCTATAGCCCATCTCAAATTTC 58.701 40.000 0.00 0.00 0.00 2.17
3093 3438 6.266131 TCACCTATAGCCCATCTCAAATTT 57.734 37.500 0.00 0.00 0.00 1.82
3094 3439 5.912149 TCACCTATAGCCCATCTCAAATT 57.088 39.130 0.00 0.00 0.00 1.82
3095 3440 5.280882 CCATCACCTATAGCCCATCTCAAAT 60.281 44.000 0.00 0.00 0.00 2.32
3096 3441 4.042062 CCATCACCTATAGCCCATCTCAAA 59.958 45.833 0.00 0.00 0.00 2.69
3097 3442 3.584406 CCATCACCTATAGCCCATCTCAA 59.416 47.826 0.00 0.00 0.00 3.02
3098 3443 3.176411 CCATCACCTATAGCCCATCTCA 58.824 50.000 0.00 0.00 0.00 3.27
3099 3444 2.503356 CCCATCACCTATAGCCCATCTC 59.497 54.545 0.00 0.00 0.00 2.75
3100 3445 2.555664 CCCATCACCTATAGCCCATCT 58.444 52.381 0.00 0.00 0.00 2.90
3101 3446 1.561542 CCCCATCACCTATAGCCCATC 59.438 57.143 0.00 0.00 0.00 3.51
3102 3447 1.132069 ACCCCATCACCTATAGCCCAT 60.132 52.381 0.00 0.00 0.00 4.00
3103 3448 0.270699 ACCCCATCACCTATAGCCCA 59.729 55.000 0.00 0.00 0.00 5.36
3104 3449 1.446016 AACCCCATCACCTATAGCCC 58.554 55.000 0.00 0.00 0.00 5.19
3105 3450 3.587506 ACATAACCCCATCACCTATAGCC 59.412 47.826 0.00 0.00 0.00 3.93
3106 3451 4.910458 ACATAACCCCATCACCTATAGC 57.090 45.455 0.00 0.00 0.00 2.97
3107 3452 6.295719 GGTACATAACCCCATCACCTATAG 57.704 45.833 0.00 0.00 43.16 1.31
3121 3466 4.808042 TGACCCTACCCTAGGTACATAAC 58.192 47.826 8.29 0.00 44.73 1.89
3122 3467 5.399991 CATGACCCTACCCTAGGTACATAA 58.600 45.833 8.29 0.00 44.73 1.90
3123 3468 4.202749 CCATGACCCTACCCTAGGTACATA 60.203 50.000 8.29 0.00 44.73 2.29
3124 3469 3.439558 CCATGACCCTACCCTAGGTACAT 60.440 52.174 8.29 0.00 44.73 2.29
3125 3470 2.090943 CCATGACCCTACCCTAGGTACA 60.091 54.545 8.29 0.00 44.73 2.90
3126 3471 2.178544 TCCATGACCCTACCCTAGGTAC 59.821 54.545 8.29 0.00 44.73 3.34
3127 3472 2.178544 GTCCATGACCCTACCCTAGGTA 59.821 54.545 8.29 0.00 44.73 3.08
3128 3473 1.062352 GTCCATGACCCTACCCTAGGT 60.062 57.143 8.29 0.00 44.73 3.08
3129 3474 1.718280 GTCCATGACCCTACCCTAGG 58.282 60.000 0.06 0.06 45.81 3.02
3130 3475 1.718280 GGTCCATGACCCTACCCTAG 58.282 60.000 1.68 0.00 46.19 3.02
3131 3476 3.961588 GGTCCATGACCCTACCCTA 57.038 57.895 1.68 0.00 46.19 3.53
3132 3477 4.831613 GGTCCATGACCCTACCCT 57.168 61.111 1.68 0.00 46.19 4.34
3148 3493 3.073356 TGGGGTAAGTTACTTGGAACAGG 59.927 47.826 12.65 0.00 42.39 4.00
3149 3494 4.360951 TGGGGTAAGTTACTTGGAACAG 57.639 45.455 12.65 0.00 42.39 3.16
3150 3495 4.412858 TCTTGGGGTAAGTTACTTGGAACA 59.587 41.667 12.65 0.00 37.65 3.18
3151 3496 4.758674 GTCTTGGGGTAAGTTACTTGGAAC 59.241 45.833 12.65 0.00 37.65 3.62
3152 3497 4.412858 TGTCTTGGGGTAAGTTACTTGGAA 59.587 41.667 12.65 1.29 37.65 3.53
3153 3498 3.975312 TGTCTTGGGGTAAGTTACTTGGA 59.025 43.478 12.65 2.76 37.65 3.53
3154 3499 4.360951 TGTCTTGGGGTAAGTTACTTGG 57.639 45.455 12.65 0.68 37.65 3.61
3155 3500 4.941873 GGATGTCTTGGGGTAAGTTACTTG 59.058 45.833 12.65 0.35 37.65 3.16
3156 3501 4.850386 AGGATGTCTTGGGGTAAGTTACTT 59.150 41.667 12.65 2.32 37.65 2.24
3157 3502 4.436079 AGGATGTCTTGGGGTAAGTTACT 58.564 43.478 12.65 0.00 37.65 2.24
3158 3503 4.838904 AGGATGTCTTGGGGTAAGTTAC 57.161 45.455 4.32 4.32 37.65 2.50
3159 3504 6.266080 TCTAAGGATGTCTTGGGGTAAGTTA 58.734 40.000 0.00 0.00 37.65 2.24
3160 3505 5.098663 TCTAAGGATGTCTTGGGGTAAGTT 58.901 41.667 0.00 0.00 37.65 2.66
3161 3506 4.695606 TCTAAGGATGTCTTGGGGTAAGT 58.304 43.478 0.00 0.00 37.65 2.24
3162 3507 5.425539 TCTTCTAAGGATGTCTTGGGGTAAG 59.574 44.000 0.00 0.00 36.93 2.34
3163 3508 5.347124 TCTTCTAAGGATGTCTTGGGGTAA 58.653 41.667 0.00 0.00 36.93 2.85
3164 3509 4.955335 TCTTCTAAGGATGTCTTGGGGTA 58.045 43.478 0.00 0.00 36.93 3.69
3165 3510 3.777522 CTCTTCTAAGGATGTCTTGGGGT 59.222 47.826 0.00 0.00 36.93 4.95
3166 3511 3.135530 CCTCTTCTAAGGATGTCTTGGGG 59.864 52.174 0.00 0.00 38.87 4.96
3167 3512 3.777522 ACCTCTTCTAAGGATGTCTTGGG 59.222 47.826 0.00 0.00 38.87 4.12
3168 3513 4.440802 CGACCTCTTCTAAGGATGTCTTGG 60.441 50.000 0.00 0.00 38.87 3.61
3169 3514 4.677584 CGACCTCTTCTAAGGATGTCTTG 58.322 47.826 0.00 0.00 38.87 3.02
3170 3515 3.131400 GCGACCTCTTCTAAGGATGTCTT 59.869 47.826 0.00 0.00 38.87 3.01
3171 3516 2.691011 GCGACCTCTTCTAAGGATGTCT 59.309 50.000 0.00 0.00 38.87 3.41
3172 3517 2.223852 GGCGACCTCTTCTAAGGATGTC 60.224 54.545 0.00 0.00 38.87 3.06
3173 3518 1.757699 GGCGACCTCTTCTAAGGATGT 59.242 52.381 0.00 0.00 38.87 3.06
3174 3519 2.035632 AGGCGACCTCTTCTAAGGATG 58.964 52.381 0.00 0.00 38.87 3.51
3175 3520 2.463047 AGGCGACCTCTTCTAAGGAT 57.537 50.000 0.00 0.00 38.87 3.24
3176 3521 2.100989 GAAGGCGACCTCTTCTAAGGA 58.899 52.381 0.00 0.00 38.87 3.36
3177 3522 1.137282 GGAAGGCGACCTCTTCTAAGG 59.863 57.143 0.00 0.00 40.17 2.69
3178 3523 1.825474 TGGAAGGCGACCTCTTCTAAG 59.175 52.381 0.00 0.00 40.17 2.18
3179 3524 1.825474 CTGGAAGGCGACCTCTTCTAA 59.175 52.381 0.00 0.00 40.17 2.10
3180 3525 1.272536 ACTGGAAGGCGACCTCTTCTA 60.273 52.381 0.00 0.00 40.17 2.10
3181 3526 0.543174 ACTGGAAGGCGACCTCTTCT 60.543 55.000 0.00 0.00 40.17 2.85
3182 3527 0.108567 GACTGGAAGGCGACCTCTTC 60.109 60.000 0.00 0.00 39.30 2.87
3183 3528 1.976112 GACTGGAAGGCGACCTCTT 59.024 57.895 0.00 0.00 39.30 2.85
3184 3529 3.701454 GACTGGAAGGCGACCTCT 58.299 61.111 0.00 0.00 39.30 3.69
3191 3536 0.036388 TCATTGGTCGACTGGAAGGC 60.036 55.000 16.46 0.00 40.17 4.35
3192 3537 1.406069 CCTCATTGGTCGACTGGAAGG 60.406 57.143 16.46 11.99 39.30 3.46
3193 3538 1.550524 TCCTCATTGGTCGACTGGAAG 59.449 52.381 16.46 6.98 37.21 3.46
3194 3539 1.275291 GTCCTCATTGGTCGACTGGAA 59.725 52.381 16.46 6.59 37.07 3.53
3195 3540 0.895530 GTCCTCATTGGTCGACTGGA 59.104 55.000 16.46 10.47 37.07 3.86
3196 3541 0.608130 TGTCCTCATTGGTCGACTGG 59.392 55.000 16.46 8.42 37.07 4.00
3197 3542 1.000843 TGTGTCCTCATTGGTCGACTG 59.999 52.381 16.46 6.21 37.07 3.51
3198 3543 1.000955 GTGTGTCCTCATTGGTCGACT 59.999 52.381 16.46 0.00 37.07 4.18
3199 3544 1.000955 AGTGTGTCCTCATTGGTCGAC 59.999 52.381 7.13 7.13 37.07 4.20
3200 3545 1.272490 GAGTGTGTCCTCATTGGTCGA 59.728 52.381 0.00 0.00 37.07 4.20
3201 3546 1.714794 GAGTGTGTCCTCATTGGTCG 58.285 55.000 0.00 0.00 37.07 4.79
3202 3547 1.272490 TCGAGTGTGTCCTCATTGGTC 59.728 52.381 0.00 0.00 37.07 4.02
3203 3548 1.000955 GTCGAGTGTGTCCTCATTGGT 59.999 52.381 0.00 0.00 37.07 3.67
3204 3549 1.273606 AGTCGAGTGTGTCCTCATTGG 59.726 52.381 0.00 0.00 37.10 3.16
3205 3550 2.332104 CAGTCGAGTGTGTCCTCATTG 58.668 52.381 12.29 0.00 0.00 2.82
3206 3551 1.273606 CCAGTCGAGTGTGTCCTCATT 59.726 52.381 18.64 0.00 0.00 2.57
3207 3552 0.891373 CCAGTCGAGTGTGTCCTCAT 59.109 55.000 18.64 0.00 0.00 2.90
3208 3553 1.806461 GCCAGTCGAGTGTGTCCTCA 61.806 60.000 18.64 0.00 0.00 3.86
3209 3554 1.080434 GCCAGTCGAGTGTGTCCTC 60.080 63.158 18.64 0.00 0.00 3.71
3210 3555 2.574955 GGCCAGTCGAGTGTGTCCT 61.575 63.158 18.64 0.00 0.00 3.85
3211 3556 2.048127 GGCCAGTCGAGTGTGTCC 60.048 66.667 18.64 12.43 0.00 4.02
3212 3557 1.373497 CAGGCCAGTCGAGTGTGTC 60.373 63.158 18.64 11.58 0.00 3.67
3213 3558 1.399744 TTCAGGCCAGTCGAGTGTGT 61.400 55.000 18.64 0.20 0.00 3.72
3214 3559 0.668706 CTTCAGGCCAGTCGAGTGTG 60.669 60.000 18.64 10.74 0.00 3.82
3215 3560 1.668294 CTTCAGGCCAGTCGAGTGT 59.332 57.895 18.64 0.00 0.00 3.55
3216 3561 1.079543 CCTTCAGGCCAGTCGAGTG 60.080 63.158 13.55 13.55 0.00 3.51
3217 3562 1.228894 TCCTTCAGGCCAGTCGAGT 60.229 57.895 5.01 0.00 34.44 4.18
3218 3563 1.216710 GTCCTTCAGGCCAGTCGAG 59.783 63.158 5.01 0.00 34.44 4.04
3219 3564 1.228894 AGTCCTTCAGGCCAGTCGA 60.229 57.895 5.01 0.00 34.44 4.20
3220 3565 1.216710 GAGTCCTTCAGGCCAGTCG 59.783 63.158 5.01 0.00 34.44 4.18
3221 3566 1.216710 CGAGTCCTTCAGGCCAGTC 59.783 63.158 5.01 0.00 34.44 3.51
3222 3567 1.228894 TCGAGTCCTTCAGGCCAGT 60.229 57.895 5.01 0.00 34.44 4.00
3223 3568 1.216710 GTCGAGTCCTTCAGGCCAG 59.783 63.158 5.01 0.00 34.44 4.85
3224 3569 2.283529 GGTCGAGTCCTTCAGGCCA 61.284 63.158 5.01 0.00 34.44 5.36
3225 3570 2.283529 TGGTCGAGTCCTTCAGGCC 61.284 63.158 0.00 0.00 34.44 5.19
3226 3571 1.079750 GTGGTCGAGTCCTTCAGGC 60.080 63.158 0.00 0.00 34.44 4.85
3227 3572 1.213013 CGTGGTCGAGTCCTTCAGG 59.787 63.158 0.00 0.00 39.71 3.86
3228 3573 0.596577 TTCGTGGTCGAGTCCTTCAG 59.403 55.000 0.00 0.00 46.81 3.02
3229 3574 0.596577 CTTCGTGGTCGAGTCCTTCA 59.403 55.000 0.00 0.00 46.81 3.02
3230 3575 0.879765 TCTTCGTGGTCGAGTCCTTC 59.120 55.000 0.00 0.00 46.81 3.46
3231 3576 0.597072 GTCTTCGTGGTCGAGTCCTT 59.403 55.000 0.00 0.00 46.81 3.36
3232 3577 0.250814 AGTCTTCGTGGTCGAGTCCT 60.251 55.000 0.00 0.00 46.81 3.85
3233 3578 0.168568 GAGTCTTCGTGGTCGAGTCC 59.831 60.000 0.00 0.00 46.81 3.85
3234 3579 0.873054 TGAGTCTTCGTGGTCGAGTC 59.127 55.000 0.00 0.00 46.81 3.36
3235 3580 0.592148 GTGAGTCTTCGTGGTCGAGT 59.408 55.000 0.00 0.00 46.81 4.18
3236 3581 0.875728 AGTGAGTCTTCGTGGTCGAG 59.124 55.000 0.00 0.00 46.81 4.04
3237 3582 0.873054 GAGTGAGTCTTCGTGGTCGA 59.127 55.000 0.00 0.00 44.66 4.20
3238 3583 0.452950 CGAGTGAGTCTTCGTGGTCG 60.453 60.000 8.78 0.00 38.55 4.79
3239 3584 0.873054 TCGAGTGAGTCTTCGTGGTC 59.127 55.000 14.37 0.00 0.00 4.02
3240 3585 0.592148 GTCGAGTGAGTCTTCGTGGT 59.408 55.000 14.37 0.00 0.00 4.16
3241 3586 0.109689 GGTCGAGTGAGTCTTCGTGG 60.110 60.000 14.37 0.00 0.00 4.94
3242 3587 0.591659 TGGTCGAGTGAGTCTTCGTG 59.408 55.000 14.37 0.00 0.00 4.35
3243 3588 0.592148 GTGGTCGAGTGAGTCTTCGT 59.408 55.000 14.37 0.00 0.00 3.85
3244 3589 0.109689 GGTGGTCGAGTGAGTCTTCG 60.110 60.000 10.22 10.22 0.00 3.79
3245 3590 0.959553 TGGTGGTCGAGTGAGTCTTC 59.040 55.000 0.00 0.00 0.00 2.87
3246 3591 0.962489 CTGGTGGTCGAGTGAGTCTT 59.038 55.000 0.00 0.00 0.00 3.01
3247 3592 0.896019 CCTGGTGGTCGAGTGAGTCT 60.896 60.000 0.00 0.00 0.00 3.24
3248 3593 0.894184 TCCTGGTGGTCGAGTGAGTC 60.894 60.000 0.00 0.00 34.23 3.36
3249 3594 0.896019 CTCCTGGTGGTCGAGTGAGT 60.896 60.000 0.00 0.00 34.23 3.41
3250 3595 1.599606 CCTCCTGGTGGTCGAGTGAG 61.600 65.000 6.63 0.00 34.23 3.51
3251 3596 1.606601 CCTCCTGGTGGTCGAGTGA 60.607 63.158 6.63 0.00 34.23 3.41
3252 3597 1.908793 ACCTCCTGGTGGTCGAGTG 60.909 63.158 14.54 0.00 46.51 3.51
3253 3598 2.526628 ACCTCCTGGTGGTCGAGT 59.473 61.111 14.54 0.00 46.51 4.18
3262 3607 1.197430 ACTGCCTCTTGACCTCCTGG 61.197 60.000 0.00 0.00 39.83 4.45
3263 3608 0.248843 GACTGCCTCTTGACCTCCTG 59.751 60.000 0.00 0.00 0.00 3.86
3264 3609 0.116143 AGACTGCCTCTTGACCTCCT 59.884 55.000 0.00 0.00 0.00 3.69
3265 3610 0.248843 CAGACTGCCTCTTGACCTCC 59.751 60.000 0.00 0.00 0.00 4.30
3266 3611 0.390998 GCAGACTGCCTCTTGACCTC 60.391 60.000 17.01 0.00 37.42 3.85
3267 3612 1.123861 TGCAGACTGCCTCTTGACCT 61.124 55.000 24.33 0.00 44.23 3.85
3268 3613 0.952984 GTGCAGACTGCCTCTTGACC 60.953 60.000 24.33 0.00 44.23 4.02
3269 3614 0.034616 AGTGCAGACTGCCTCTTGAC 59.965 55.000 24.33 14.28 44.23 3.18
3270 3615 0.034476 CAGTGCAGACTGCCTCTTGA 59.966 55.000 24.33 1.59 44.23 3.02
3271 3616 2.541288 CAGTGCAGACTGCCTCTTG 58.459 57.895 24.33 12.90 44.23 3.02
3279 3624 2.974698 GCCGTTGCAGTGCAGACT 60.975 61.111 18.81 0.00 40.61 3.24
3280 3625 4.030452 GGCCGTTGCAGTGCAGAC 62.030 66.667 18.81 17.07 40.61 3.51
3281 3626 4.254709 AGGCCGTTGCAGTGCAGA 62.255 61.111 18.81 6.89 40.61 4.26
3282 3627 4.034258 CAGGCCGTTGCAGTGCAG 62.034 66.667 18.81 8.24 40.61 4.41
3283 3628 2.949705 TTACAGGCCGTTGCAGTGCA 62.950 55.000 15.37 15.37 40.13 4.57
3284 3629 1.586154 ATTACAGGCCGTTGCAGTGC 61.586 55.000 8.58 8.58 40.13 4.40
3285 3630 0.447801 GATTACAGGCCGTTGCAGTG 59.552 55.000 5.57 0.00 40.13 3.66
3286 3631 0.036164 TGATTACAGGCCGTTGCAGT 59.964 50.000 5.57 0.00 40.13 4.40
3287 3632 1.131126 CTTGATTACAGGCCGTTGCAG 59.869 52.381 5.57 0.00 40.13 4.41
3288 3633 1.164411 CTTGATTACAGGCCGTTGCA 58.836 50.000 5.57 0.00 40.13 4.08
3289 3634 1.165270 ACTTGATTACAGGCCGTTGC 58.835 50.000 5.57 0.00 0.00 4.17
3290 3635 3.617263 GTCTACTTGATTACAGGCCGTTG 59.383 47.826 5.57 0.00 0.00 4.10
3291 3636 3.514309 AGTCTACTTGATTACAGGCCGTT 59.486 43.478 5.57 0.00 0.00 4.44
3292 3637 3.097614 AGTCTACTTGATTACAGGCCGT 58.902 45.455 0.00 0.49 0.00 5.68
3293 3638 3.802948 AGTCTACTTGATTACAGGCCG 57.197 47.619 0.00 0.00 0.00 6.13
3294 3639 7.272978 TCATAAAGTCTACTTGATTACAGGCC 58.727 38.462 0.00 0.00 36.12 5.19
3295 3640 8.894768 ATCATAAAGTCTACTTGATTACAGGC 57.105 34.615 0.00 0.00 36.12 4.85
3304 3649 9.817809 TGCCTTTACTATCATAAAGTCTACTTG 57.182 33.333 0.00 0.00 39.53 3.16
3305 3650 9.819267 GTGCCTTTACTATCATAAAGTCTACTT 57.181 33.333 4.95 0.00 39.53 2.24
3306 3651 9.203163 AGTGCCTTTACTATCATAAAGTCTACT 57.797 33.333 4.95 3.78 39.53 2.57
3307 3652 9.819267 AAGTGCCTTTACTATCATAAAGTCTAC 57.181 33.333 4.95 2.06 39.53 2.59
3329 3674 2.876485 TGGTAACGCCCCACATAAAGTG 60.876 50.000 0.00 0.00 44.56 3.16
3330 3675 1.351683 TGGTAACGCCCCACATAAAGT 59.648 47.619 0.00 0.00 42.51 2.66
3331 3676 2.014128 CTGGTAACGCCCCACATAAAG 58.986 52.381 0.00 0.00 42.51 1.85
3332 3677 1.351683 ACTGGTAACGCCCCACATAAA 59.648 47.619 0.00 0.00 42.51 1.40
3333 3678 0.985760 ACTGGTAACGCCCCACATAA 59.014 50.000 0.00 0.00 42.51 1.90
3334 3679 1.863325 TACTGGTAACGCCCCACATA 58.137 50.000 0.00 0.00 42.51 2.29
3335 3680 0.985760 TTACTGGTAACGCCCCACAT 59.014 50.000 0.00 0.00 42.51 3.21
3336 3681 0.035176 GTTACTGGTAACGCCCCACA 59.965 55.000 7.70 0.00 36.47 4.17
3337 3682 2.845019 GTTACTGGTAACGCCCCAC 58.155 57.895 7.70 0.00 36.47 4.61
3344 3689 0.609662 TCTGGGGCGTTACTGGTAAC 59.390 55.000 12.13 12.13 41.37 2.50
3345 3690 0.609662 GTCTGGGGCGTTACTGGTAA 59.390 55.000 0.00 0.00 0.00 2.85
3346 3691 0.251922 AGTCTGGGGCGTTACTGGTA 60.252 55.000 0.00 0.00 0.00 3.25
3347 3692 1.125711 AAGTCTGGGGCGTTACTGGT 61.126 55.000 0.00 0.00 0.00 4.00
3348 3693 0.899720 TAAGTCTGGGGCGTTACTGG 59.100 55.000 0.00 0.00 0.00 4.00
3349 3694 2.028385 AGTTAAGTCTGGGGCGTTACTG 60.028 50.000 0.00 0.00 0.00 2.74
3350 3695 2.233186 GAGTTAAGTCTGGGGCGTTACT 59.767 50.000 2.87 0.00 0.00 2.24
3351 3696 2.028748 TGAGTTAAGTCTGGGGCGTTAC 60.029 50.000 11.52 0.00 0.00 2.50
3352 3697 2.028748 GTGAGTTAAGTCTGGGGCGTTA 60.029 50.000 11.52 0.00 0.00 3.18
3353 3698 1.053424 TGAGTTAAGTCTGGGGCGTT 58.947 50.000 11.52 0.00 0.00 4.84
3354 3699 0.320697 GTGAGTTAAGTCTGGGGCGT 59.679 55.000 11.52 0.00 0.00 5.68
3355 3700 0.391263 GGTGAGTTAAGTCTGGGGCG 60.391 60.000 11.52 0.00 0.00 6.13
3356 3701 0.984995 AGGTGAGTTAAGTCTGGGGC 59.015 55.000 11.52 0.00 0.00 5.80
3357 3702 4.903045 TTAAGGTGAGTTAAGTCTGGGG 57.097 45.455 11.52 0.00 0.00 4.96
3358 3703 5.001874 GGTTTAAGGTGAGTTAAGTCTGGG 58.998 45.833 11.52 0.00 0.00 4.45
3359 3704 5.001874 GGGTTTAAGGTGAGTTAAGTCTGG 58.998 45.833 11.52 0.00 0.00 3.86
3360 3705 5.866207 AGGGTTTAAGGTGAGTTAAGTCTG 58.134 41.667 11.52 0.00 0.00 3.51
3361 3706 5.845065 AGAGGGTTTAAGGTGAGTTAAGTCT 59.155 40.000 11.52 0.00 0.00 3.24
3362 3707 6.111669 AGAGGGTTTAAGGTGAGTTAAGTC 57.888 41.667 3.15 3.15 0.00 3.01
3363 3708 5.012871 GGAGAGGGTTTAAGGTGAGTTAAGT 59.987 44.000 0.00 0.00 0.00 2.24
3364 3709 5.248705 AGGAGAGGGTTTAAGGTGAGTTAAG 59.751 44.000 0.00 0.00 0.00 1.85
3365 3710 5.012768 CAGGAGAGGGTTTAAGGTGAGTTAA 59.987 44.000 0.00 0.00 0.00 2.01
3366 3711 4.530946 CAGGAGAGGGTTTAAGGTGAGTTA 59.469 45.833 0.00 0.00 0.00 2.24
3367 3712 3.328050 CAGGAGAGGGTTTAAGGTGAGTT 59.672 47.826 0.00 0.00 0.00 3.01
3368 3713 2.907042 CAGGAGAGGGTTTAAGGTGAGT 59.093 50.000 0.00 0.00 0.00 3.41
3369 3714 2.355209 GCAGGAGAGGGTTTAAGGTGAG 60.355 54.545 0.00 0.00 0.00 3.51
3370 3715 1.628846 GCAGGAGAGGGTTTAAGGTGA 59.371 52.381 0.00 0.00 0.00 4.02
3371 3716 1.676014 CGCAGGAGAGGGTTTAAGGTG 60.676 57.143 0.00 0.00 0.00 4.00
3372 3717 0.613777 CGCAGGAGAGGGTTTAAGGT 59.386 55.000 0.00 0.00 0.00 3.50
3373 3718 0.613777 ACGCAGGAGAGGGTTTAAGG 59.386 55.000 0.00 0.00 0.00 2.69
3374 3719 1.676014 CCACGCAGGAGAGGGTTTAAG 60.676 57.143 0.00 0.00 41.22 1.85
3375 3720 0.323629 CCACGCAGGAGAGGGTTTAA 59.676 55.000 0.00 0.00 41.22 1.52
3376 3721 1.550130 CCCACGCAGGAGAGGGTTTA 61.550 60.000 0.00 0.00 41.22 2.01
3377 3722 2.750350 CCACGCAGGAGAGGGTTT 59.250 61.111 0.00 0.00 41.22 3.27
3378 3723 3.322466 CCCACGCAGGAGAGGGTT 61.322 66.667 0.00 0.00 41.22 4.11
3381 3726 4.463879 CAGCCCACGCAGGAGAGG 62.464 72.222 0.00 0.00 41.22 3.69
3382 3727 4.463879 CCAGCCCACGCAGGAGAG 62.464 72.222 0.00 0.00 44.28 3.20
3386 3731 4.845580 CTAGCCAGCCCACGCAGG 62.846 72.222 0.00 0.00 44.34 4.85
3387 3732 4.845580 CCTAGCCAGCCCACGCAG 62.846 72.222 0.00 0.00 37.52 5.18
3390 3735 4.162690 GACCCTAGCCAGCCCACG 62.163 72.222 0.00 0.00 0.00 4.94
3391 3736 3.798511 GGACCCTAGCCAGCCCAC 61.799 72.222 0.00 0.00 0.00 4.61
3392 3737 4.024984 AGGACCCTAGCCAGCCCA 62.025 66.667 0.00 0.00 0.00 5.36
3393 3738 3.483869 CAGGACCCTAGCCAGCCC 61.484 72.222 0.00 0.00 0.00 5.19
3394 3739 3.483869 CCAGGACCCTAGCCAGCC 61.484 72.222 0.00 0.00 0.00 4.85
3395 3740 4.182433 GCCAGGACCCTAGCCAGC 62.182 72.222 0.00 0.00 0.00 4.85
3396 3741 3.854669 CGCCAGGACCCTAGCCAG 61.855 72.222 1.02 0.00 0.00 4.85
3399 3744 4.840005 GTGCGCCAGGACCCTAGC 62.840 72.222 4.18 0.00 32.08 3.42
3400 3745 3.077556 AGTGCGCCAGGACCCTAG 61.078 66.667 4.18 0.00 39.75 3.02
3401 3746 2.219449 TAGAGTGCGCCAGGACCCTA 62.219 60.000 4.18 0.00 39.75 3.53
3402 3747 2.880629 ATAGAGTGCGCCAGGACCCT 62.881 60.000 4.18 0.00 39.75 4.34
3403 3748 1.113517 TATAGAGTGCGCCAGGACCC 61.114 60.000 4.18 0.00 39.75 4.46
3404 3749 0.969894 ATATAGAGTGCGCCAGGACC 59.030 55.000 4.18 0.00 39.75 4.46
3405 3750 3.839293 CTTATATAGAGTGCGCCAGGAC 58.161 50.000 4.18 0.00 39.15 3.85
3406 3751 2.231478 GCTTATATAGAGTGCGCCAGGA 59.769 50.000 4.18 0.00 0.00 3.86
3407 3752 2.611518 GCTTATATAGAGTGCGCCAGG 58.388 52.381 4.18 0.00 0.00 4.45
3408 3753 2.029020 TGGCTTATATAGAGTGCGCCAG 60.029 50.000 4.18 0.00 40.76 4.85
3409 3754 1.967779 TGGCTTATATAGAGTGCGCCA 59.032 47.619 4.18 0.00 43.12 5.69
3410 3755 2.338500 GTGGCTTATATAGAGTGCGCC 58.662 52.381 4.18 0.00 36.64 6.53
3411 3756 2.338500 GGTGGCTTATATAGAGTGCGC 58.662 52.381 0.00 0.00 0.00 6.09
3412 3757 2.563179 AGGGTGGCTTATATAGAGTGCG 59.437 50.000 0.00 0.00 0.00 5.34
3413 3758 3.055747 GGAGGGTGGCTTATATAGAGTGC 60.056 52.174 0.00 0.00 0.00 4.40
3414 3759 4.421131 AGGAGGGTGGCTTATATAGAGTG 58.579 47.826 0.00 0.00 0.00 3.51
3415 3760 4.511294 GGAGGAGGGTGGCTTATATAGAGT 60.511 50.000 0.00 0.00 0.00 3.24
3416 3761 4.027437 GGAGGAGGGTGGCTTATATAGAG 58.973 52.174 0.00 0.00 0.00 2.43
3417 3762 3.404769 TGGAGGAGGGTGGCTTATATAGA 59.595 47.826 0.00 0.00 0.00 1.98
3418 3763 3.515901 GTGGAGGAGGGTGGCTTATATAG 59.484 52.174 0.00 0.00 0.00 1.31
3419 3764 3.116512 TGTGGAGGAGGGTGGCTTATATA 60.117 47.826 0.00 0.00 0.00 0.86
3420 3765 2.339769 GTGGAGGAGGGTGGCTTATAT 58.660 52.381 0.00 0.00 0.00 0.86
3421 3766 1.009060 TGTGGAGGAGGGTGGCTTATA 59.991 52.381 0.00 0.00 0.00 0.98
3422 3767 0.253160 TGTGGAGGAGGGTGGCTTAT 60.253 55.000 0.00 0.00 0.00 1.73
3423 3768 0.909610 CTGTGGAGGAGGGTGGCTTA 60.910 60.000 0.00 0.00 0.00 3.09
3424 3769 2.121963 TGTGGAGGAGGGTGGCTT 60.122 61.111 0.00 0.00 0.00 4.35
3425 3770 2.608988 CTGTGGAGGAGGGTGGCT 60.609 66.667 0.00 0.00 0.00 4.75
3426 3771 3.721706 CCTGTGGAGGAGGGTGGC 61.722 72.222 0.00 0.00 42.93 5.01
3427 3772 3.721706 GCCTGTGGAGGAGGGTGG 61.722 72.222 0.00 0.00 42.93 4.61
3428 3773 2.930019 TGCCTGTGGAGGAGGGTG 60.930 66.667 0.00 0.00 42.93 4.61
3429 3774 2.608988 CTGCCTGTGGAGGAGGGT 60.609 66.667 0.00 0.00 42.93 4.34
3430 3775 2.284921 TCTGCCTGTGGAGGAGGG 60.285 66.667 0.00 0.00 42.93 4.30
3431 3776 3.307445 CTCTGCCTGTGGAGGAGG 58.693 66.667 0.00 0.00 42.93 4.30
3434 3779 3.406200 CCCCTCTGCCTGTGGAGG 61.406 72.222 0.00 0.00 46.22 4.30
3435 3780 2.190488 GAACCCCTCTGCCTGTGGAG 62.190 65.000 0.00 0.00 0.00 3.86
3436 3781 2.121963 AACCCCTCTGCCTGTGGA 60.122 61.111 0.00 0.00 0.00 4.02
3437 3782 2.352805 GAACCCCTCTGCCTGTGG 59.647 66.667 0.00 0.00 0.00 4.17
3438 3783 2.046892 CGAACCCCTCTGCCTGTG 60.047 66.667 0.00 0.00 0.00 3.66
3439 3784 3.322466 CCGAACCCCTCTGCCTGT 61.322 66.667 0.00 0.00 0.00 4.00
3440 3785 4.785453 GCCGAACCCCTCTGCCTG 62.785 72.222 0.00 0.00 0.00 4.85
3450 3795 6.600078 TGTATGAATTACAAGGTGCCGAACC 61.600 44.000 0.00 0.00 41.56 3.62
3451 3796 4.393680 TGTATGAATTACAAGGTGCCGAAC 59.606 41.667 0.00 0.00 37.87 3.95
3452 3797 4.580868 TGTATGAATTACAAGGTGCCGAA 58.419 39.130 0.00 0.00 37.87 4.30
3453 3798 4.209307 TGTATGAATTACAAGGTGCCGA 57.791 40.909 0.00 0.00 37.87 5.54
3454 3799 5.065859 TGAATGTATGAATTACAAGGTGCCG 59.934 40.000 0.00 0.00 43.84 5.69
3455 3800 6.449635 TGAATGTATGAATTACAAGGTGCC 57.550 37.500 0.00 0.00 43.84 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.