Multiple sequence alignment - TraesCS2A01G377300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G377300 chr2A 100.000 2222 0 0 1 2222 619740913 619738692 0.000000e+00 4104
1 TraesCS2A01G377300 chr2A 85.650 223 16 8 1600 1806 619629516 619629294 1.030000e-53 220
2 TraesCS2A01G377300 chr3A 95.290 1550 67 4 1 1544 11599031 11597482 0.000000e+00 2453
3 TraesCS2A01G377300 chr3A 95.226 1550 68 4 1 1544 11605919 11604370 0.000000e+00 2447
4 TraesCS2A01G377300 chr3A 94.857 1536 75 2 1 1534 684743942 684745475 0.000000e+00 2396
5 TraesCS2A01G377300 chr3A 94.495 1544 82 2 1 1542 27580973 27582515 0.000000e+00 2377
6 TraesCS2A01G377300 chr3A 90.339 383 27 7 1846 2222 694071036 694070658 5.510000e-136 494
7 TraesCS2A01G377300 chr5A 94.570 1547 80 3 1 1543 23905548 23904002 0.000000e+00 2388
8 TraesCS2A01G377300 chr5A 94.373 1546 83 3 1 1544 33881955 33880412 0.000000e+00 2370
9 TraesCS2A01G377300 chr5A 94.308 1546 84 3 1 1544 601068903 601070446 0.000000e+00 2364
10 TraesCS2A01G377300 chr2B 94.495 1544 80 3 1 1542 721723156 721724696 0.000000e+00 2375
11 TraesCS2A01G377300 chr2B 82.716 243 8 11 1600 1812 559194552 559194314 3.770000e-43 185
12 TraesCS2A01G377300 chr4B 94.596 1536 79 2 1 1534 604142986 604144519 0.000000e+00 2374
13 TraesCS2A01G377300 chr5D 90.601 383 28 5 1846 2222 442185868 442185488 3.290000e-138 501
14 TraesCS2A01G377300 chr5D 89.870 385 28 7 1846 2222 193125475 193125094 3.320000e-133 484
15 TraesCS2A01G377300 chr2D 90.339 383 27 6 1846 2222 205051618 205051996 5.510000e-136 494
16 TraesCS2A01G377300 chr2D 96.020 201 6 1 1587 1785 477266518 477266318 2.130000e-85 326
17 TraesCS2A01G377300 chr7D 90.314 382 28 5 1847 2222 587548690 587549068 1.980000e-135 492
18 TraesCS2A01G377300 chr7D 89.717 389 30 6 1841 2222 597064722 597065107 2.560000e-134 488
19 TraesCS2A01G377300 chr7A 90.365 384 24 10 1846 2222 11975921 11975544 1.980000e-135 492
20 TraesCS2A01G377300 chr7A 90.130 385 28 8 1846 2222 385566842 385566460 1.980000e-135 492
21 TraesCS2A01G377300 chr1B 89.974 389 28 8 1841 2222 188879869 188880253 1.980000e-135 492


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G377300 chr2A 619738692 619740913 2221 True 4104 4104 100.000 1 2222 1 chr2A.!!$R2 2221
1 TraesCS2A01G377300 chr3A 11597482 11599031 1549 True 2453 2453 95.290 1 1544 1 chr3A.!!$R1 1543
2 TraesCS2A01G377300 chr3A 11604370 11605919 1549 True 2447 2447 95.226 1 1544 1 chr3A.!!$R2 1543
3 TraesCS2A01G377300 chr3A 684743942 684745475 1533 False 2396 2396 94.857 1 1534 1 chr3A.!!$F2 1533
4 TraesCS2A01G377300 chr3A 27580973 27582515 1542 False 2377 2377 94.495 1 1542 1 chr3A.!!$F1 1541
5 TraesCS2A01G377300 chr5A 23904002 23905548 1546 True 2388 2388 94.570 1 1543 1 chr5A.!!$R1 1542
6 TraesCS2A01G377300 chr5A 33880412 33881955 1543 True 2370 2370 94.373 1 1544 1 chr5A.!!$R2 1543
7 TraesCS2A01G377300 chr5A 601068903 601070446 1543 False 2364 2364 94.308 1 1544 1 chr5A.!!$F1 1543
8 TraesCS2A01G377300 chr2B 721723156 721724696 1540 False 2375 2375 94.495 1 1542 1 chr2B.!!$F1 1541
9 TraesCS2A01G377300 chr4B 604142986 604144519 1533 False 2374 2374 94.596 1 1534 1 chr4B.!!$F1 1533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
952 954 1.148273 ACGTGCACCCACTGAACAT 59.852 52.632 12.15 0.0 39.86 2.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1990 1995 0.032815 TTCGTTGTGTGAGATGGCGA 59.967 50.0 0.0 0.0 0.0 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
142 143 7.875041 TTTGGTTTCTCTGTCATGAAACAAAAA 59.125 29.630 20.35 18.39 45.37 1.94
340 341 5.590530 ACAGAACAGCGAGAGATATTCTT 57.409 39.130 0.00 0.00 35.87 2.52
369 370 1.274167 GTTACGGAGTCATGTGACCCA 59.726 52.381 9.41 0.00 45.85 4.51
415 416 9.999009 TGTAACTGAAATAGTAGTACATCTTCG 57.001 33.333 2.52 2.22 39.18 3.79
583 584 5.342361 ACCCACCTTAATTCCAGGTAAAA 57.658 39.130 8.59 0.00 43.30 1.52
652 653 4.217510 CAATTCTAATCAAGGGGATGGCA 58.782 43.478 0.00 0.00 36.02 4.92
751 752 9.434275 TGAGAAGTAATCATGGGAAATAGACTA 57.566 33.333 0.00 0.00 0.00 2.59
952 954 1.148273 ACGTGCACCCACTGAACAT 59.852 52.632 12.15 0.00 39.86 2.71
960 962 4.069304 GCACCCACTGAACATACACTTTA 58.931 43.478 0.00 0.00 0.00 1.85
988 990 2.031012 TGCTGTGAACGGAGCTGG 59.969 61.111 0.00 0.00 36.11 4.85
1022 1024 2.892425 GATGGTTGCCGGAGAGCG 60.892 66.667 5.05 0.00 34.65 5.03
1043 1045 2.735772 CCCTGGACGTGGATGGAGG 61.736 68.421 0.00 0.00 0.00 4.30
1305 1310 9.905713 ATTTAGTTTCCTAGAATAAGATGCACA 57.094 29.630 0.00 0.00 0.00 4.57
1330 1335 8.394877 CACGTGATTATTAGTTTCCTAATTGCA 58.605 33.333 10.90 0.00 40.25 4.08
1375 1380 1.754803 TCCACGGTGGAGTATGATCAC 59.245 52.381 25.53 0.00 42.67 3.06
1377 1382 2.168521 CCACGGTGGAGTATGATCACTT 59.831 50.000 22.77 0.00 40.96 3.16
1422 1427 8.589701 ACATAGAAAATGGTTTAGGTTAAGGG 57.410 34.615 0.00 0.00 0.00 3.95
1453 1458 7.466860 CGTTAGATTGATTTTAGTGGGCCTAAC 60.467 40.741 4.53 1.09 35.36 2.34
1458 1463 1.058284 TTTAGTGGGCCTAACCGTGT 58.942 50.000 4.53 0.00 40.62 4.49
1490 1495 5.836821 AGATCTATGTACGCTTTGTGAGA 57.163 39.130 0.00 0.00 0.00 3.27
1561 1566 9.887629 ATATAGATGCAGAAACAGATATCTTGG 57.112 33.333 1.33 0.00 0.00 3.61
1562 1567 4.820716 AGATGCAGAAACAGATATCTTGGC 59.179 41.667 1.33 1.76 0.00 4.52
1563 1568 2.938451 TGCAGAAACAGATATCTTGGCG 59.062 45.455 1.33 0.00 0.00 5.69
1564 1569 2.289002 GCAGAAACAGATATCTTGGCGG 59.711 50.000 1.33 0.00 0.00 6.13
1565 1570 3.797039 CAGAAACAGATATCTTGGCGGA 58.203 45.455 1.33 0.00 0.00 5.54
1566 1571 3.806521 CAGAAACAGATATCTTGGCGGAG 59.193 47.826 1.33 0.00 0.00 4.63
1567 1572 3.706594 AGAAACAGATATCTTGGCGGAGA 59.293 43.478 1.33 0.00 0.00 3.71
1568 1573 4.346418 AGAAACAGATATCTTGGCGGAGAT 59.654 41.667 1.33 8.07 39.59 2.75
1569 1574 3.951775 ACAGATATCTTGGCGGAGATC 57.048 47.619 1.33 6.63 37.54 2.75
1570 1575 2.564947 ACAGATATCTTGGCGGAGATCC 59.435 50.000 1.33 0.00 37.54 3.36
1571 1576 2.564504 CAGATATCTTGGCGGAGATCCA 59.435 50.000 1.33 0.00 37.54 3.41
1572 1577 3.197333 CAGATATCTTGGCGGAGATCCAT 59.803 47.826 1.33 0.00 37.54 3.41
1573 1578 3.450457 AGATATCTTGGCGGAGATCCATC 59.550 47.826 0.00 6.08 37.54 3.51
1574 1579 1.727062 ATCTTGGCGGAGATCCATCT 58.273 50.000 0.00 0.00 40.50 2.90
1583 1588 0.316841 GAGATCCATCTCGTCAGGGC 59.683 60.000 0.76 0.00 43.29 5.19
1584 1589 0.397675 AGATCCATCTCGTCAGGGCA 60.398 55.000 0.00 0.00 29.30 5.36
1585 1590 0.033228 GATCCATCTCGTCAGGGCAG 59.967 60.000 0.00 0.00 0.00 4.85
1586 1591 1.406065 ATCCATCTCGTCAGGGCAGG 61.406 60.000 0.00 0.00 0.00 4.85
1587 1592 2.202987 CATCTCGTCAGGGCAGGC 60.203 66.667 0.00 0.00 0.00 4.85
1588 1593 2.364842 ATCTCGTCAGGGCAGGCT 60.365 61.111 0.00 0.00 0.00 4.58
1589 1594 1.075970 ATCTCGTCAGGGCAGGCTA 60.076 57.895 0.00 0.00 0.00 3.93
1590 1595 0.687757 ATCTCGTCAGGGCAGGCTAA 60.688 55.000 0.00 0.00 0.00 3.09
1591 1596 0.687757 TCTCGTCAGGGCAGGCTAAT 60.688 55.000 0.00 0.00 0.00 1.73
1592 1597 0.249657 CTCGTCAGGGCAGGCTAATC 60.250 60.000 0.00 0.00 0.00 1.75
1593 1598 1.227674 CGTCAGGGCAGGCTAATCC 60.228 63.158 0.00 0.00 0.00 3.01
1594 1599 1.227674 GTCAGGGCAGGCTAATCCG 60.228 63.158 0.00 0.00 40.77 4.18
1595 1600 1.689233 TCAGGGCAGGCTAATCCGT 60.689 57.895 0.00 0.00 40.77 4.69
1596 1601 1.224592 CAGGGCAGGCTAATCCGTT 59.775 57.895 0.00 0.00 40.77 4.44
1597 1602 0.468226 CAGGGCAGGCTAATCCGTTA 59.532 55.000 0.00 0.00 40.77 3.18
1598 1603 0.759346 AGGGCAGGCTAATCCGTTAG 59.241 55.000 0.00 0.00 40.25 2.34
1599 1604 0.250338 GGGCAGGCTAATCCGTTAGG 60.250 60.000 0.00 0.00 38.19 2.69
1609 1614 3.909587 TCCGTTAGGAAGATCCCGA 57.090 52.632 0.00 0.00 45.12 5.14
1610 1615 2.376695 TCCGTTAGGAAGATCCCGAT 57.623 50.000 0.00 0.00 45.12 4.18
1611 1616 2.236766 TCCGTTAGGAAGATCCCGATC 58.763 52.381 0.00 0.00 45.12 3.69
1612 1617 1.068472 CCGTTAGGAAGATCCCGATCG 60.068 57.143 8.51 8.51 40.43 3.69
1613 1618 1.607628 CGTTAGGAAGATCCCGATCGT 59.392 52.381 15.09 0.00 42.48 3.73
1614 1619 2.604855 CGTTAGGAAGATCCCGATCGTG 60.605 54.545 15.09 1.95 42.48 4.35
1615 1620 2.359981 TAGGAAGATCCCGATCGTGT 57.640 50.000 15.09 0.00 42.48 4.49
1616 1621 1.033574 AGGAAGATCCCGATCGTGTC 58.966 55.000 15.09 8.77 42.48 3.67
1617 1622 0.744874 GGAAGATCCCGATCGTGTCA 59.255 55.000 15.09 0.00 42.48 3.58
1618 1623 1.269309 GGAAGATCCCGATCGTGTCAG 60.269 57.143 15.09 0.00 42.48 3.51
1619 1624 0.103208 AAGATCCCGATCGTGTCAGC 59.897 55.000 15.09 0.00 42.48 4.26
1620 1625 0.753479 AGATCCCGATCGTGTCAGCT 60.753 55.000 15.09 0.00 42.48 4.24
1621 1626 0.596083 GATCCCGATCGTGTCAGCTG 60.596 60.000 15.09 7.63 0.00 4.24
1622 1627 2.021068 ATCCCGATCGTGTCAGCTGG 62.021 60.000 15.13 5.39 0.00 4.85
1623 1628 2.573869 CCGATCGTGTCAGCTGGT 59.426 61.111 15.13 0.00 0.00 4.00
1624 1629 1.517257 CCGATCGTGTCAGCTGGTC 60.517 63.158 15.13 8.33 0.00 4.02
1625 1630 1.212751 CGATCGTGTCAGCTGGTCA 59.787 57.895 15.13 10.99 0.00 4.02
1626 1631 0.388520 CGATCGTGTCAGCTGGTCAA 60.389 55.000 15.13 0.59 0.00 3.18
1627 1632 1.795768 GATCGTGTCAGCTGGTCAAA 58.204 50.000 15.13 6.30 0.00 2.69
1628 1633 1.728971 GATCGTGTCAGCTGGTCAAAG 59.271 52.381 15.13 10.97 0.00 2.77
1629 1634 0.464036 TCGTGTCAGCTGGTCAAAGT 59.536 50.000 15.13 0.00 0.00 2.66
1630 1635 0.861837 CGTGTCAGCTGGTCAAAGTC 59.138 55.000 15.13 1.64 0.00 3.01
1631 1636 0.861837 GTGTCAGCTGGTCAAAGTCG 59.138 55.000 15.13 0.00 0.00 4.18
1632 1637 0.464036 TGTCAGCTGGTCAAAGTCGT 59.536 50.000 15.13 0.00 0.00 4.34
1633 1638 0.861837 GTCAGCTGGTCAAAGTCGTG 59.138 55.000 15.13 0.00 0.00 4.35
1634 1639 0.249868 TCAGCTGGTCAAAGTCGTGG 60.250 55.000 15.13 0.00 0.00 4.94
1635 1640 1.071471 AGCTGGTCAAAGTCGTGGG 59.929 57.895 0.00 0.00 0.00 4.61
1636 1641 1.070786 GCTGGTCAAAGTCGTGGGA 59.929 57.895 0.00 0.00 0.00 4.37
1637 1642 1.228657 GCTGGTCAAAGTCGTGGGAC 61.229 60.000 0.00 0.00 43.76 4.46
1645 1650 2.360852 GTCGTGGGACTCGGAGGA 60.361 66.667 10.23 0.00 45.95 3.71
1646 1651 1.975407 GTCGTGGGACTCGGAGGAA 60.975 63.158 10.23 0.00 45.95 3.36
1647 1652 1.000019 TCGTGGGACTCGGAGGAAT 60.000 57.895 10.23 0.00 45.95 3.01
1648 1653 1.035932 TCGTGGGACTCGGAGGAATC 61.036 60.000 10.23 0.00 45.95 2.52
1649 1654 1.038130 CGTGGGACTCGGAGGAATCT 61.038 60.000 10.23 0.00 41.96 2.40
1650 1655 1.196012 GTGGGACTCGGAGGAATCTT 58.804 55.000 10.23 0.00 0.00 2.40
1651 1656 1.134670 GTGGGACTCGGAGGAATCTTG 60.135 57.143 10.23 0.00 0.00 3.02
1652 1657 0.466124 GGGACTCGGAGGAATCTTGG 59.534 60.000 10.23 0.00 0.00 3.61
1653 1658 0.179070 GGACTCGGAGGAATCTTGGC 60.179 60.000 10.23 0.00 0.00 4.52
1654 1659 0.528684 GACTCGGAGGAATCTTGGCG 60.529 60.000 10.23 0.00 0.00 5.69
1655 1660 1.258445 ACTCGGAGGAATCTTGGCGT 61.258 55.000 10.23 0.00 0.00 5.68
1656 1661 0.807667 CTCGGAGGAATCTTGGCGTG 60.808 60.000 0.00 0.00 0.00 5.34
1657 1662 2.464459 CGGAGGAATCTTGGCGTGC 61.464 63.158 0.00 0.00 0.00 5.34
1658 1663 1.377202 GGAGGAATCTTGGCGTGCA 60.377 57.895 0.00 0.00 0.00 4.57
1659 1664 1.372087 GGAGGAATCTTGGCGTGCAG 61.372 60.000 0.00 0.00 0.00 4.41
1669 1674 2.666190 GCGTGCAGCCACAAGAGA 60.666 61.111 0.00 0.00 42.17 3.10
1670 1675 2.037136 GCGTGCAGCCACAAGAGAT 61.037 57.895 0.00 0.00 42.17 2.75
1671 1676 0.740868 GCGTGCAGCCACAAGAGATA 60.741 55.000 0.00 0.00 42.17 1.98
1672 1677 1.002366 CGTGCAGCCACAAGAGATAC 58.998 55.000 0.00 0.00 42.17 2.24
1673 1678 1.672737 CGTGCAGCCACAAGAGATACA 60.673 52.381 0.00 0.00 42.17 2.29
1674 1679 2.636830 GTGCAGCCACAAGAGATACAT 58.363 47.619 0.00 0.00 41.67 2.29
1675 1680 3.012518 GTGCAGCCACAAGAGATACATT 58.987 45.455 0.00 0.00 41.67 2.71
1676 1681 3.441572 GTGCAGCCACAAGAGATACATTT 59.558 43.478 0.00 0.00 41.67 2.32
1677 1682 4.635765 GTGCAGCCACAAGAGATACATTTA 59.364 41.667 0.00 0.00 41.67 1.40
1678 1683 5.297776 GTGCAGCCACAAGAGATACATTTAT 59.702 40.000 0.00 0.00 41.67 1.40
1679 1684 6.483307 GTGCAGCCACAAGAGATACATTTATA 59.517 38.462 0.00 0.00 41.67 0.98
1680 1685 6.483307 TGCAGCCACAAGAGATACATTTATAC 59.517 38.462 0.00 0.00 0.00 1.47
1681 1686 6.346919 GCAGCCACAAGAGATACATTTATACG 60.347 42.308 0.00 0.00 0.00 3.06
1682 1687 5.696724 AGCCACAAGAGATACATTTATACGC 59.303 40.000 0.00 0.00 0.00 4.42
1683 1688 5.465390 GCCACAAGAGATACATTTATACGCA 59.535 40.000 0.00 0.00 0.00 5.24
1684 1689 6.147821 GCCACAAGAGATACATTTATACGCAT 59.852 38.462 0.00 0.00 0.00 4.73
1685 1690 7.622256 GCCACAAGAGATACATTTATACGCATC 60.622 40.741 0.00 0.00 0.00 3.91
1686 1691 7.410835 CCACAAGAGATACATTTATACGCATCG 60.411 40.741 0.00 0.00 0.00 3.84
1687 1692 7.326063 CACAAGAGATACATTTATACGCATCGA 59.674 37.037 0.00 0.00 0.00 3.59
1688 1693 8.029522 ACAAGAGATACATTTATACGCATCGAT 58.970 33.333 0.00 0.00 0.00 3.59
1689 1694 8.864024 CAAGAGATACATTTATACGCATCGATT 58.136 33.333 0.00 0.00 0.00 3.34
1697 1702 9.302345 ACATTTATACGCATCGATTATTAGAGG 57.698 33.333 0.00 0.00 0.00 3.69
1698 1703 9.516314 CATTTATACGCATCGATTATTAGAGGA 57.484 33.333 0.00 0.00 0.00 3.71
1700 1705 9.731819 TTTATACGCATCGATTATTAGAGGATC 57.268 33.333 0.00 0.00 0.00 3.36
1701 1706 5.644977 ACGCATCGATTATTAGAGGATCA 57.355 39.130 0.00 0.00 37.82 2.92
1702 1707 5.403246 ACGCATCGATTATTAGAGGATCAC 58.597 41.667 0.00 0.00 37.82 3.06
1703 1708 5.184096 ACGCATCGATTATTAGAGGATCACT 59.816 40.000 0.00 0.00 37.82 3.41
1704 1709 5.741510 CGCATCGATTATTAGAGGATCACTC 59.258 44.000 0.00 0.00 46.98 3.51
1718 1723 6.205784 GAGGATCACTCGCTATCAATATAGC 58.794 44.000 7.22 7.22 45.28 2.97
1719 1724 6.734597 GAGGATCACTCGCTATCAATATAGCC 60.735 46.154 10.86 0.00 45.62 3.93
1720 1725 9.783533 GAGGATCACTCGCTATCAATATAGCCG 62.784 48.148 10.86 7.16 45.62 5.52
1727 1732 4.456280 CTATCAATATAGCCGTGCCTGA 57.544 45.455 0.00 0.00 0.00 3.86
1728 1733 2.820059 TCAATATAGCCGTGCCTGAG 57.180 50.000 0.00 0.00 0.00 3.35
1729 1734 2.039418 TCAATATAGCCGTGCCTGAGT 58.961 47.619 0.00 0.00 0.00 3.41
1730 1735 2.434336 TCAATATAGCCGTGCCTGAGTT 59.566 45.455 0.00 0.00 0.00 3.01
1731 1736 3.118408 TCAATATAGCCGTGCCTGAGTTT 60.118 43.478 0.00 0.00 0.00 2.66
1732 1737 2.596904 TATAGCCGTGCCTGAGTTTC 57.403 50.000 0.00 0.00 0.00 2.78
1733 1738 0.107654 ATAGCCGTGCCTGAGTTTCC 60.108 55.000 0.00 0.00 0.00 3.13
1734 1739 1.476845 TAGCCGTGCCTGAGTTTCCA 61.477 55.000 0.00 0.00 0.00 3.53
1735 1740 1.675641 GCCGTGCCTGAGTTTCCAT 60.676 57.895 0.00 0.00 0.00 3.41
1736 1741 0.392461 GCCGTGCCTGAGTTTCCATA 60.392 55.000 0.00 0.00 0.00 2.74
1737 1742 1.747206 GCCGTGCCTGAGTTTCCATAT 60.747 52.381 0.00 0.00 0.00 1.78
1738 1743 2.213499 CCGTGCCTGAGTTTCCATATC 58.787 52.381 0.00 0.00 0.00 1.63
1739 1744 2.158900 CCGTGCCTGAGTTTCCATATCT 60.159 50.000 0.00 0.00 0.00 1.98
1740 1745 2.868583 CGTGCCTGAGTTTCCATATCTG 59.131 50.000 0.00 0.00 0.00 2.90
1741 1746 2.615912 GTGCCTGAGTTTCCATATCTGC 59.384 50.000 0.00 0.00 0.00 4.26
1742 1747 2.507058 TGCCTGAGTTTCCATATCTGCT 59.493 45.455 0.00 0.00 0.00 4.24
1743 1748 2.877168 GCCTGAGTTTCCATATCTGCTG 59.123 50.000 0.00 0.00 0.00 4.41
1744 1749 2.877168 CCTGAGTTTCCATATCTGCTGC 59.123 50.000 0.00 0.00 0.00 5.25
1745 1750 3.433314 CCTGAGTTTCCATATCTGCTGCT 60.433 47.826 0.00 0.00 0.00 4.24
1746 1751 4.197750 CTGAGTTTCCATATCTGCTGCTT 58.802 43.478 0.00 0.00 0.00 3.91
1747 1752 4.592942 TGAGTTTCCATATCTGCTGCTTT 58.407 39.130 0.00 0.00 0.00 3.51
1748 1753 4.637534 TGAGTTTCCATATCTGCTGCTTTC 59.362 41.667 0.00 0.00 0.00 2.62
1749 1754 4.592942 AGTTTCCATATCTGCTGCTTTCA 58.407 39.130 0.00 0.00 0.00 2.69
1750 1755 4.397417 AGTTTCCATATCTGCTGCTTTCAC 59.603 41.667 0.00 0.00 0.00 3.18
1751 1756 3.632643 TCCATATCTGCTGCTTTCACA 57.367 42.857 0.00 0.00 0.00 3.58
1752 1757 4.160642 TCCATATCTGCTGCTTTCACAT 57.839 40.909 0.00 0.00 0.00 3.21
1753 1758 3.881089 TCCATATCTGCTGCTTTCACATG 59.119 43.478 0.00 0.00 0.00 3.21
1754 1759 3.550233 CCATATCTGCTGCTTTCACATGC 60.550 47.826 0.00 0.00 0.00 4.06
1755 1760 1.835494 ATCTGCTGCTTTCACATGCT 58.165 45.000 0.00 0.00 0.00 3.79
1756 1761 0.879090 TCTGCTGCTTTCACATGCTG 59.121 50.000 0.00 0.00 0.00 4.41
1757 1762 4.164252 GCTGCTTTCACATGCTGC 57.836 55.556 0.00 0.00 44.21 5.25
1758 1763 1.445582 GCTGCTTTCACATGCTGCC 60.446 57.895 0.00 0.00 44.54 4.85
1759 1764 1.214589 CTGCTTTCACATGCTGCCC 59.785 57.895 0.00 0.00 0.00 5.36
1760 1765 2.180017 GCTTTCACATGCTGCCCG 59.820 61.111 0.00 0.00 0.00 6.13
1761 1766 2.180017 CTTTCACATGCTGCCCGC 59.820 61.111 0.00 0.00 39.77 6.13
1762 1767 3.672255 CTTTCACATGCTGCCCGCG 62.672 63.158 0.00 0.00 43.27 6.46
1778 1783 3.639008 CGTGCTGCGCAGTTCACA 61.639 61.111 32.95 23.86 40.08 3.58
1779 1784 2.051882 GTGCTGCGCAGTTCACAC 60.052 61.111 35.80 29.13 40.08 3.82
1780 1785 2.513435 TGCTGCGCAGTTCACACA 60.513 55.556 35.80 22.22 33.32 3.72
1781 1786 1.893335 TGCTGCGCAGTTCACACAT 60.893 52.632 35.80 0.00 33.32 3.21
1782 1787 1.441515 GCTGCGCAGTTCACACATG 60.442 57.895 35.80 10.42 0.00 3.21
1783 1788 1.208358 CTGCGCAGTTCACACATGG 59.792 57.895 29.24 0.00 0.00 3.66
1784 1789 1.227793 TGCGCAGTTCACACATGGA 60.228 52.632 5.66 0.00 0.00 3.41
1785 1790 1.207593 GCGCAGTTCACACATGGAC 59.792 57.895 0.30 0.00 34.03 4.02
1786 1791 1.506309 GCGCAGTTCACACATGGACA 61.506 55.000 0.30 0.00 36.69 4.02
1787 1792 1.159285 CGCAGTTCACACATGGACAT 58.841 50.000 0.00 0.00 36.69 3.06
1788 1793 1.135888 CGCAGTTCACACATGGACATG 60.136 52.381 10.57 10.57 44.15 3.21
1789 1794 1.200716 GCAGTTCACACATGGACATGG 59.799 52.381 15.94 7.93 42.91 3.66
1790 1795 2.781923 CAGTTCACACATGGACATGGA 58.218 47.619 15.94 2.05 42.91 3.41
1791 1796 3.148412 CAGTTCACACATGGACATGGAA 58.852 45.455 15.94 7.59 42.91 3.53
1792 1797 3.569277 CAGTTCACACATGGACATGGAAA 59.431 43.478 15.94 2.91 42.91 3.13
1793 1798 3.822735 AGTTCACACATGGACATGGAAAG 59.177 43.478 15.94 6.13 42.91 2.62
1794 1799 3.786368 TCACACATGGACATGGAAAGA 57.214 42.857 15.94 6.18 42.91 2.52
1795 1800 3.678289 TCACACATGGACATGGAAAGAG 58.322 45.455 15.94 3.29 42.91 2.85
1796 1801 2.163010 CACACATGGACATGGAAAGAGC 59.837 50.000 15.94 0.00 42.91 4.09
1797 1802 2.224843 ACACATGGACATGGAAAGAGCA 60.225 45.455 15.94 0.00 42.91 4.26
1798 1803 2.821378 CACATGGACATGGAAAGAGCAA 59.179 45.455 15.94 0.00 42.91 3.91
1799 1804 3.256383 CACATGGACATGGAAAGAGCAAA 59.744 43.478 15.94 0.00 42.91 3.68
1800 1805 3.896888 ACATGGACATGGAAAGAGCAAAA 59.103 39.130 15.94 0.00 42.91 2.44
1801 1806 4.344679 ACATGGACATGGAAAGAGCAAAAA 59.655 37.500 15.94 0.00 42.91 1.94
1830 1835 8.961294 ACACTACTACAATCTAAGTTAACACG 57.039 34.615 8.61 0.00 0.00 4.49
1831 1836 8.571336 ACACTACTACAATCTAAGTTAACACGT 58.429 33.333 8.61 0.00 0.00 4.49
1868 1873 7.317842 TCTAATGAAGTAGTTGGTAGTCTCG 57.682 40.000 0.00 0.00 0.00 4.04
1869 1874 5.979288 AATGAAGTAGTTGGTAGTCTCGT 57.021 39.130 0.00 0.00 0.00 4.18
1870 1875 5.979288 ATGAAGTAGTTGGTAGTCTCGTT 57.021 39.130 0.00 0.00 0.00 3.85
1871 1876 5.779529 TGAAGTAGTTGGTAGTCTCGTTT 57.220 39.130 0.00 0.00 0.00 3.60
1872 1877 5.766222 TGAAGTAGTTGGTAGTCTCGTTTC 58.234 41.667 0.00 0.00 0.00 2.78
1873 1878 5.533903 TGAAGTAGTTGGTAGTCTCGTTTCT 59.466 40.000 0.00 0.00 0.00 2.52
1874 1879 6.712095 TGAAGTAGTTGGTAGTCTCGTTTCTA 59.288 38.462 0.00 0.00 0.00 2.10
1875 1880 7.392673 TGAAGTAGTTGGTAGTCTCGTTTCTAT 59.607 37.037 0.00 0.00 0.00 1.98
1876 1881 7.086230 AGTAGTTGGTAGTCTCGTTTCTATG 57.914 40.000 0.00 0.00 0.00 2.23
1877 1882 5.979288 AGTTGGTAGTCTCGTTTCTATGT 57.021 39.130 0.00 0.00 0.00 2.29
1878 1883 6.342338 AGTTGGTAGTCTCGTTTCTATGTT 57.658 37.500 0.00 0.00 0.00 2.71
1879 1884 6.756221 AGTTGGTAGTCTCGTTTCTATGTTT 58.244 36.000 0.00 0.00 0.00 2.83
1880 1885 7.215085 AGTTGGTAGTCTCGTTTCTATGTTTT 58.785 34.615 0.00 0.00 0.00 2.43
1881 1886 7.713942 AGTTGGTAGTCTCGTTTCTATGTTTTT 59.286 33.333 0.00 0.00 0.00 1.94
1901 1906 5.885449 TTTTTGTCCCACCTTTCATGATT 57.115 34.783 0.00 0.00 0.00 2.57
1902 1907 5.885449 TTTTGTCCCACCTTTCATGATTT 57.115 34.783 0.00 0.00 0.00 2.17
1903 1908 5.885449 TTTGTCCCACCTTTCATGATTTT 57.115 34.783 0.00 0.00 0.00 1.82
1904 1909 5.885449 TTGTCCCACCTTTCATGATTTTT 57.115 34.783 0.00 0.00 0.00 1.94
1922 1927 2.963599 TTTTGGTACCTCCTTCCACC 57.036 50.000 14.36 0.00 37.07 4.61
1923 1928 2.127651 TTTGGTACCTCCTTCCACCT 57.872 50.000 14.36 0.00 37.07 4.00
1924 1929 2.127651 TTGGTACCTCCTTCCACCTT 57.872 50.000 14.36 0.00 37.07 3.50
1925 1930 2.127651 TGGTACCTCCTTCCACCTTT 57.872 50.000 14.36 0.00 37.07 3.11
1926 1931 1.702957 TGGTACCTCCTTCCACCTTTG 59.297 52.381 14.36 0.00 37.07 2.77
1927 1932 1.613520 GGTACCTCCTTCCACCTTTGC 60.614 57.143 4.06 0.00 0.00 3.68
1928 1933 1.351350 GTACCTCCTTCCACCTTTGCT 59.649 52.381 0.00 0.00 0.00 3.91
1929 1934 0.111253 ACCTCCTTCCACCTTTGCTG 59.889 55.000 0.00 0.00 0.00 4.41
1930 1935 0.610232 CCTCCTTCCACCTTTGCTGG 60.610 60.000 0.00 0.00 0.00 4.85
1931 1936 0.111253 CTCCTTCCACCTTTGCTGGT 59.889 55.000 0.00 0.00 41.77 4.00
1932 1937 0.555769 TCCTTCCACCTTTGCTGGTT 59.444 50.000 0.00 0.00 38.45 3.67
1933 1938 1.063266 TCCTTCCACCTTTGCTGGTTT 60.063 47.619 0.00 0.00 38.45 3.27
1934 1939 1.762370 CCTTCCACCTTTGCTGGTTTT 59.238 47.619 0.00 0.00 38.45 2.43
1935 1940 2.483538 CCTTCCACCTTTGCTGGTTTTG 60.484 50.000 0.00 0.00 38.45 2.44
1936 1941 1.859302 TCCACCTTTGCTGGTTTTGT 58.141 45.000 0.00 0.00 38.45 2.83
1937 1942 2.183679 TCCACCTTTGCTGGTTTTGTT 58.816 42.857 0.00 0.00 38.45 2.83
1938 1943 2.167487 TCCACCTTTGCTGGTTTTGTTC 59.833 45.455 0.00 0.00 38.45 3.18
1939 1944 2.192624 CACCTTTGCTGGTTTTGTTCG 58.807 47.619 0.00 0.00 38.45 3.95
1940 1945 1.822371 ACCTTTGCTGGTTTTGTTCGT 59.178 42.857 0.00 0.00 36.89 3.85
1941 1946 3.018149 ACCTTTGCTGGTTTTGTTCGTA 58.982 40.909 0.00 0.00 36.89 3.43
1942 1947 3.066203 ACCTTTGCTGGTTTTGTTCGTAG 59.934 43.478 0.00 0.00 36.89 3.51
1943 1948 3.314080 CCTTTGCTGGTTTTGTTCGTAGA 59.686 43.478 0.00 0.00 0.00 2.59
1944 1949 4.023193 CCTTTGCTGGTTTTGTTCGTAGAT 60.023 41.667 0.00 0.00 35.04 1.98
1945 1950 5.507315 CCTTTGCTGGTTTTGTTCGTAGATT 60.507 40.000 0.00 0.00 35.04 2.40
1946 1951 5.508200 TTGCTGGTTTTGTTCGTAGATTT 57.492 34.783 0.00 0.00 35.04 2.17
1947 1952 5.508200 TGCTGGTTTTGTTCGTAGATTTT 57.492 34.783 0.00 0.00 35.04 1.82
1948 1953 5.897050 TGCTGGTTTTGTTCGTAGATTTTT 58.103 33.333 0.00 0.00 35.04 1.94
1969 1974 2.899303 TTTTCATCCCCTTCCCTCAC 57.101 50.000 0.00 0.00 0.00 3.51
1970 1975 2.059756 TTTCATCCCCTTCCCTCACT 57.940 50.000 0.00 0.00 0.00 3.41
1971 1976 2.059756 TTCATCCCCTTCCCTCACTT 57.940 50.000 0.00 0.00 0.00 3.16
1972 1977 2.059756 TCATCCCCTTCCCTCACTTT 57.940 50.000 0.00 0.00 0.00 2.66
1973 1978 3.214694 TCATCCCCTTCCCTCACTTTA 57.785 47.619 0.00 0.00 0.00 1.85
1974 1979 3.747852 TCATCCCCTTCCCTCACTTTAT 58.252 45.455 0.00 0.00 0.00 1.40
1975 1980 3.716872 TCATCCCCTTCCCTCACTTTATC 59.283 47.826 0.00 0.00 0.00 1.75
1976 1981 2.116238 TCCCCTTCCCTCACTTTATCG 58.884 52.381 0.00 0.00 0.00 2.92
1977 1982 1.141053 CCCCTTCCCTCACTTTATCGG 59.859 57.143 0.00 0.00 0.00 4.18
1978 1983 1.838077 CCCTTCCCTCACTTTATCGGT 59.162 52.381 0.00 0.00 0.00 4.69
1979 1984 2.238898 CCCTTCCCTCACTTTATCGGTT 59.761 50.000 0.00 0.00 0.00 4.44
1980 1985 3.308188 CCCTTCCCTCACTTTATCGGTTT 60.308 47.826 0.00 0.00 0.00 3.27
1981 1986 4.080751 CCCTTCCCTCACTTTATCGGTTTA 60.081 45.833 0.00 0.00 0.00 2.01
1982 1987 5.397559 CCCTTCCCTCACTTTATCGGTTTAT 60.398 44.000 0.00 0.00 0.00 1.40
1983 1988 6.120220 CCTTCCCTCACTTTATCGGTTTATT 58.880 40.000 0.00 0.00 0.00 1.40
1984 1989 6.602009 CCTTCCCTCACTTTATCGGTTTATTT 59.398 38.462 0.00 0.00 0.00 1.40
1985 1990 7.122204 CCTTCCCTCACTTTATCGGTTTATTTT 59.878 37.037 0.00 0.00 0.00 1.82
1986 1991 8.411991 TTCCCTCACTTTATCGGTTTATTTTT 57.588 30.769 0.00 0.00 0.00 1.94
1987 1992 7.822658 TCCCTCACTTTATCGGTTTATTTTTG 58.177 34.615 0.00 0.00 0.00 2.44
1988 1993 6.530181 CCCTCACTTTATCGGTTTATTTTTGC 59.470 38.462 0.00 0.00 0.00 3.68
1989 1994 6.250527 CCTCACTTTATCGGTTTATTTTTGCG 59.749 38.462 0.00 0.00 0.00 4.85
1990 1995 6.670233 TCACTTTATCGGTTTATTTTTGCGT 58.330 32.000 0.00 0.00 0.00 5.24
1991 1996 6.797995 TCACTTTATCGGTTTATTTTTGCGTC 59.202 34.615 0.00 0.00 0.00 5.19
1992 1997 5.791480 ACTTTATCGGTTTATTTTTGCGTCG 59.209 36.000 0.00 0.00 0.00 5.12
1993 1998 1.953113 TCGGTTTATTTTTGCGTCGC 58.047 45.000 11.10 11.10 0.00 5.19
1994 1999 0.979098 CGGTTTATTTTTGCGTCGCC 59.021 50.000 15.88 0.00 0.00 5.54
1995 2000 1.663445 CGGTTTATTTTTGCGTCGCCA 60.663 47.619 15.88 0.00 0.00 5.69
1996 2001 2.601804 GGTTTATTTTTGCGTCGCCAT 58.398 42.857 15.88 4.25 0.00 4.40
1997 2002 2.596862 GGTTTATTTTTGCGTCGCCATC 59.403 45.455 15.88 0.00 0.00 3.51
1998 2003 3.498082 GTTTATTTTTGCGTCGCCATCT 58.502 40.909 15.88 0.00 0.00 2.90
1999 2004 3.398954 TTATTTTTGCGTCGCCATCTC 57.601 42.857 15.88 0.00 0.00 2.75
2000 2005 1.164411 ATTTTTGCGTCGCCATCTCA 58.836 45.000 15.88 0.00 0.00 3.27
2001 2006 0.237235 TTTTTGCGTCGCCATCTCAC 59.763 50.000 15.88 0.00 0.00 3.51
2002 2007 0.882484 TTTTGCGTCGCCATCTCACA 60.882 50.000 15.88 0.00 0.00 3.58
2003 2008 1.565156 TTTGCGTCGCCATCTCACAC 61.565 55.000 15.88 0.00 0.00 3.82
2004 2009 2.432456 GCGTCGCCATCTCACACA 60.432 61.111 5.75 0.00 0.00 3.72
2005 2010 2.027073 GCGTCGCCATCTCACACAA 61.027 57.895 5.75 0.00 0.00 3.33
2006 2011 1.781555 CGTCGCCATCTCACACAAC 59.218 57.895 0.00 0.00 0.00 3.32
2007 2012 1.781555 GTCGCCATCTCACACAACG 59.218 57.895 0.00 0.00 0.00 4.10
2008 2013 0.666274 GTCGCCATCTCACACAACGA 60.666 55.000 0.00 0.00 0.00 3.85
2009 2014 0.032815 TCGCCATCTCACACAACGAA 59.967 50.000 0.00 0.00 0.00 3.85
2010 2015 0.865111 CGCCATCTCACACAACGAAA 59.135 50.000 0.00 0.00 0.00 3.46
2011 2016 1.136252 CGCCATCTCACACAACGAAAG 60.136 52.381 0.00 0.00 0.00 2.62
2012 2017 2.143122 GCCATCTCACACAACGAAAGA 58.857 47.619 0.00 0.00 0.00 2.52
2013 2018 2.548057 GCCATCTCACACAACGAAAGAA 59.452 45.455 0.00 0.00 0.00 2.52
2014 2019 3.003275 GCCATCTCACACAACGAAAGAAA 59.997 43.478 0.00 0.00 0.00 2.52
2015 2020 4.320494 GCCATCTCACACAACGAAAGAAAT 60.320 41.667 0.00 0.00 0.00 2.17
2016 2021 5.385617 CCATCTCACACAACGAAAGAAATC 58.614 41.667 0.00 0.00 0.00 2.17
2017 2022 5.180117 CCATCTCACACAACGAAAGAAATCT 59.820 40.000 0.00 0.00 0.00 2.40
2018 2023 5.657470 TCTCACACAACGAAAGAAATCTG 57.343 39.130 0.00 0.00 0.00 2.90
2019 2024 5.356426 TCTCACACAACGAAAGAAATCTGA 58.644 37.500 0.00 0.00 0.00 3.27
2020 2025 5.815222 TCTCACACAACGAAAGAAATCTGAA 59.185 36.000 0.00 0.00 0.00 3.02
2021 2026 5.806286 TCACACAACGAAAGAAATCTGAAC 58.194 37.500 0.00 0.00 0.00 3.18
2022 2027 5.352846 TCACACAACGAAAGAAATCTGAACA 59.647 36.000 0.00 0.00 0.00 3.18
2023 2028 5.678483 CACACAACGAAAGAAATCTGAACAG 59.322 40.000 0.00 0.00 0.00 3.16
2024 2029 5.584649 ACACAACGAAAGAAATCTGAACAGA 59.415 36.000 6.98 6.98 42.37 3.41
2026 2031 7.441157 ACACAACGAAAGAAATCTGAACAGATA 59.559 33.333 16.13 0.00 46.75 1.98
2027 2032 8.282592 CACAACGAAAGAAATCTGAACAGATAA 58.717 33.333 16.13 0.00 46.75 1.75
2028 2033 8.499162 ACAACGAAAGAAATCTGAACAGATAAG 58.501 33.333 16.13 6.97 46.75 1.73
2029 2034 8.712363 CAACGAAAGAAATCTGAACAGATAAGA 58.288 33.333 16.13 0.00 46.75 2.10
2030 2035 8.833231 ACGAAAGAAATCTGAACAGATAAGAA 57.167 30.769 16.13 0.00 46.75 2.52
2031 2036 8.713271 ACGAAAGAAATCTGAACAGATAAGAAC 58.287 33.333 16.13 7.68 46.75 3.01
2032 2037 8.930760 CGAAAGAAATCTGAACAGATAAGAACT 58.069 33.333 16.13 9.34 46.75 3.01
2036 2041 9.225436 AGAAATCTGAACAGATAAGAACTTTCC 57.775 33.333 16.13 3.42 46.75 3.13
2037 2042 8.924511 AAATCTGAACAGATAAGAACTTTCCA 57.075 30.769 16.13 0.00 46.75 3.53
2038 2043 9.525826 AAATCTGAACAGATAAGAACTTTCCAT 57.474 29.630 16.13 0.00 46.75 3.41
2040 2045 9.606631 ATCTGAACAGATAAGAACTTTCCATAC 57.393 33.333 14.56 0.00 45.69 2.39
2041 2046 8.816894 TCTGAACAGATAAGAACTTTCCATACT 58.183 33.333 0.00 0.00 31.41 2.12
2042 2047 8.777865 TGAACAGATAAGAACTTTCCATACTG 57.222 34.615 0.00 0.00 0.00 2.74
2043 2048 7.824289 TGAACAGATAAGAACTTTCCATACTGG 59.176 37.037 0.00 0.00 39.43 4.00
2044 2049 6.116126 ACAGATAAGAACTTTCCATACTGGC 58.884 40.000 0.00 0.00 37.47 4.85
2045 2050 5.235186 CAGATAAGAACTTTCCATACTGGCG 59.765 44.000 0.00 0.00 37.47 5.69
2046 2051 1.739067 AGAACTTTCCATACTGGCGC 58.261 50.000 0.00 0.00 37.47 6.53
2047 2052 1.003118 AGAACTTTCCATACTGGCGCA 59.997 47.619 10.83 0.00 37.47 6.09
2048 2053 1.810151 GAACTTTCCATACTGGCGCAA 59.190 47.619 10.83 0.00 37.47 4.85
2049 2054 1.453155 ACTTTCCATACTGGCGCAAG 58.547 50.000 11.17 11.17 37.47 4.01
2050 2055 1.271379 ACTTTCCATACTGGCGCAAGT 60.271 47.619 23.34 23.34 37.47 3.16
2051 2056 1.812571 CTTTCCATACTGGCGCAAGTT 59.187 47.619 25.12 8.30 37.47 2.66
2052 2057 2.772077 TTCCATACTGGCGCAAGTTA 57.228 45.000 25.12 9.62 37.47 2.24
2053 2058 3.275617 TTCCATACTGGCGCAAGTTAT 57.724 42.857 25.12 11.57 37.47 1.89
2054 2059 3.275617 TCCATACTGGCGCAAGTTATT 57.724 42.857 25.12 5.79 37.47 1.40
2055 2060 3.616219 TCCATACTGGCGCAAGTTATTT 58.384 40.909 25.12 3.03 37.47 1.40
2056 2061 4.771903 TCCATACTGGCGCAAGTTATTTA 58.228 39.130 25.12 4.46 37.47 1.40
2057 2062 4.814234 TCCATACTGGCGCAAGTTATTTAG 59.186 41.667 25.12 6.74 37.47 1.85
2058 2063 4.574828 CCATACTGGCGCAAGTTATTTAGT 59.425 41.667 25.12 7.62 41.68 2.24
2059 2064 5.756347 CCATACTGGCGCAAGTTATTTAGTA 59.244 40.000 25.12 1.83 41.68 1.82
2060 2065 6.259167 CCATACTGGCGCAAGTTATTTAGTAA 59.741 38.462 25.12 0.97 41.68 2.24
2061 2066 7.041372 CCATACTGGCGCAAGTTATTTAGTAAT 60.041 37.037 25.12 3.77 41.68 1.89
2062 2067 6.119144 ACTGGCGCAAGTTATTTAGTAATG 57.881 37.500 12.94 0.00 41.68 1.90
2063 2068 5.646360 ACTGGCGCAAGTTATTTAGTAATGT 59.354 36.000 12.94 0.00 41.68 2.71
2064 2069 6.819649 ACTGGCGCAAGTTATTTAGTAATGTA 59.180 34.615 12.94 0.00 41.68 2.29
2065 2070 7.011109 ACTGGCGCAAGTTATTTAGTAATGTAG 59.989 37.037 12.94 0.00 41.68 2.74
2066 2071 7.042950 TGGCGCAAGTTATTTAGTAATGTAGA 58.957 34.615 10.83 0.00 41.68 2.59
2067 2072 7.549842 TGGCGCAAGTTATTTAGTAATGTAGAA 59.450 33.333 10.83 0.00 41.68 2.10
2068 2073 8.557029 GGCGCAAGTTATTTAGTAATGTAGAAT 58.443 33.333 10.83 0.00 41.68 2.40
2069 2074 9.582223 GCGCAAGTTATTTAGTAATGTAGAATC 57.418 33.333 0.30 0.00 41.68 2.52
2135 2140 8.918202 ACTTTACCTTAAATCACTCAATCACA 57.082 30.769 0.00 0.00 0.00 3.58
2136 2141 9.520515 ACTTTACCTTAAATCACTCAATCACAT 57.479 29.630 0.00 0.00 0.00 3.21
2171 2176 9.489393 AAAAATTGTTTTTCAGAAAAATCGCTC 57.511 25.926 21.31 10.58 41.85 5.03
2172 2177 7.769272 AATTGTTTTTCAGAAAAATCGCTCA 57.231 28.000 21.31 12.70 41.85 4.26
2173 2178 7.769272 ATTGTTTTTCAGAAAAATCGCTCAA 57.231 28.000 21.31 18.97 41.85 3.02
2174 2179 7.769272 TTGTTTTTCAGAAAAATCGCTCAAT 57.231 28.000 21.31 0.00 41.85 2.57
2175 2180 7.393551 TGTTTTTCAGAAAAATCGCTCAATC 57.606 32.000 21.31 8.17 41.85 2.67
2176 2181 6.977502 TGTTTTTCAGAAAAATCGCTCAATCA 59.022 30.769 21.31 10.30 41.85 2.57
2177 2182 6.991485 TTTTCAGAAAAATCGCTCAATCAC 57.009 33.333 5.81 0.00 29.44 3.06
2178 2183 5.687770 TTCAGAAAAATCGCTCAATCACA 57.312 34.783 0.00 0.00 0.00 3.58
2179 2184 5.885230 TCAGAAAAATCGCTCAATCACAT 57.115 34.783 0.00 0.00 0.00 3.21
2180 2185 6.258230 TCAGAAAAATCGCTCAATCACATT 57.742 33.333 0.00 0.00 0.00 2.71
2181 2186 7.376435 TCAGAAAAATCGCTCAATCACATTA 57.624 32.000 0.00 0.00 0.00 1.90
2182 2187 7.815641 TCAGAAAAATCGCTCAATCACATTAA 58.184 30.769 0.00 0.00 0.00 1.40
2183 2188 7.750458 TCAGAAAAATCGCTCAATCACATTAAC 59.250 33.333 0.00 0.00 0.00 2.01
2184 2189 7.008628 CAGAAAAATCGCTCAATCACATTAACC 59.991 37.037 0.00 0.00 0.00 2.85
2185 2190 6.515272 AAAATCGCTCAATCACATTAACCT 57.485 33.333 0.00 0.00 0.00 3.50
2186 2191 6.515272 AAATCGCTCAATCACATTAACCTT 57.485 33.333 0.00 0.00 0.00 3.50
2187 2192 7.624360 AAATCGCTCAATCACATTAACCTTA 57.376 32.000 0.00 0.00 0.00 2.69
2188 2193 6.604735 ATCGCTCAATCACATTAACCTTAC 57.395 37.500 0.00 0.00 0.00 2.34
2189 2194 4.873827 TCGCTCAATCACATTAACCTTACC 59.126 41.667 0.00 0.00 0.00 2.85
2190 2195 4.876107 CGCTCAATCACATTAACCTTACCT 59.124 41.667 0.00 0.00 0.00 3.08
2191 2196 5.354234 CGCTCAATCACATTAACCTTACCTT 59.646 40.000 0.00 0.00 0.00 3.50
2192 2197 6.537301 CGCTCAATCACATTAACCTTACCTTA 59.463 38.462 0.00 0.00 0.00 2.69
2193 2198 7.065324 CGCTCAATCACATTAACCTTACCTTAA 59.935 37.037 0.00 0.00 0.00 1.85
2194 2199 8.182227 GCTCAATCACATTAACCTTACCTTAAC 58.818 37.037 0.00 0.00 0.00 2.01
2195 2200 9.449719 CTCAATCACATTAACCTTACCTTAACT 57.550 33.333 0.00 0.00 0.00 2.24
2196 2201 9.444600 TCAATCACATTAACCTTACCTTAACTC 57.555 33.333 0.00 0.00 0.00 3.01
2197 2202 9.226606 CAATCACATTAACCTTACCTTAACTCA 57.773 33.333 0.00 0.00 0.00 3.41
2198 2203 9.975218 AATCACATTAACCTTACCTTAACTCAT 57.025 29.630 0.00 0.00 0.00 2.90
2199 2204 8.786826 TCACATTAACCTTACCTTAACTCATG 57.213 34.615 0.00 0.00 0.00 3.07
2200 2205 7.827236 TCACATTAACCTTACCTTAACTCATGG 59.173 37.037 0.00 0.00 0.00 3.66
2201 2206 7.827236 CACATTAACCTTACCTTAACTCATGGA 59.173 37.037 0.00 0.00 0.00 3.41
2202 2207 8.557450 ACATTAACCTTACCTTAACTCATGGAT 58.443 33.333 0.00 0.00 0.00 3.41
2203 2208 8.840321 CATTAACCTTACCTTAACTCATGGATG 58.160 37.037 0.00 0.00 0.00 3.51
2204 2209 5.373812 ACCTTACCTTAACTCATGGATGG 57.626 43.478 0.00 0.00 0.00 3.51
2205 2210 4.788617 ACCTTACCTTAACTCATGGATGGT 59.211 41.667 0.00 0.00 0.00 3.55
2206 2211 5.968167 ACCTTACCTTAACTCATGGATGGTA 59.032 40.000 0.00 0.00 0.00 3.25
2207 2212 6.445786 ACCTTACCTTAACTCATGGATGGTAA 59.554 38.462 0.00 0.00 37.15 2.85
2208 2213 7.128883 ACCTTACCTTAACTCATGGATGGTAAT 59.871 37.037 0.00 0.00 37.75 1.89
2209 2214 7.661847 CCTTACCTTAACTCATGGATGGTAATC 59.338 40.741 0.00 0.00 37.75 1.75
2210 2215 6.575244 ACCTTAACTCATGGATGGTAATCA 57.425 37.500 0.00 0.00 34.17 2.57
2211 2216 6.969043 ACCTTAACTCATGGATGGTAATCAA 58.031 36.000 0.00 0.00 34.17 2.57
2212 2217 7.586349 ACCTTAACTCATGGATGGTAATCAAT 58.414 34.615 0.00 0.00 34.17 2.57
2213 2218 7.721399 ACCTTAACTCATGGATGGTAATCAATC 59.279 37.037 0.00 0.00 34.17 2.67
2214 2219 7.941238 CCTTAACTCATGGATGGTAATCAATCT 59.059 37.037 0.00 0.00 34.17 2.40
2215 2220 9.347240 CTTAACTCATGGATGGTAATCAATCTT 57.653 33.333 0.00 0.00 34.17 2.40
2216 2221 7.814264 AACTCATGGATGGTAATCAATCTTC 57.186 36.000 0.00 0.00 34.17 2.87
2217 2222 6.903516 ACTCATGGATGGTAATCAATCTTCA 58.096 36.000 0.00 0.00 34.17 3.02
2218 2223 7.348815 ACTCATGGATGGTAATCAATCTTCAA 58.651 34.615 0.00 0.00 34.17 2.69
2219 2224 7.835682 ACTCATGGATGGTAATCAATCTTCAAA 59.164 33.333 0.00 0.00 34.17 2.69
2220 2225 7.999679 TCATGGATGGTAATCAATCTTCAAAC 58.000 34.615 0.00 0.00 34.17 2.93
2221 2226 7.614974 TCATGGATGGTAATCAATCTTCAAACA 59.385 33.333 0.00 0.00 34.17 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
142 143 9.314321 CATATAAAGTGTACTCAGTCGGATTTT 57.686 33.333 0.00 0.00 0.00 1.82
340 341 5.464057 CACATGACTCCGTAACTGTTGTTAA 59.536 40.000 0.00 0.00 39.96 2.01
415 416 6.603940 AGATTCAGTAGGAGGCAAGATATC 57.396 41.667 0.00 0.00 0.00 1.63
652 653 4.287552 ACTGGACCGTATCAAGAGGTAAT 58.712 43.478 0.00 0.00 38.57 1.89
708 709 2.234661 TCTCATGTTCATGTCGGCTTCT 59.765 45.455 11.73 0.00 0.00 2.85
751 752 6.054295 GGATACTGAAGAAGTCAAGATGCAT 58.946 40.000 0.00 0.00 40.56 3.96
805 806 3.944650 TGGCACGTACATAAGAATGCAAT 59.055 39.130 0.00 0.00 36.50 3.56
952 954 0.896923 ACCCACGCCGATAAAGTGTA 59.103 50.000 0.00 0.00 34.34 2.90
988 990 3.554692 CGGCATCCGCGTTGACTC 61.555 66.667 4.92 0.00 41.17 3.36
1022 1024 2.436646 CATCCACGTCCAGGGCAC 60.437 66.667 0.00 0.00 0.00 5.01
1105 1107 0.761323 TCTTCCTCCGGGAACACACA 60.761 55.000 0.00 0.00 45.72 3.72
1137 1139 4.424711 GCCACGATGGGGGAAGCA 62.425 66.667 0.00 0.00 38.19 3.91
1268 1273 9.466497 TTCTAGGAAACTAAATCAGAATGCATT 57.534 29.630 12.83 12.83 43.83 3.56
1297 1302 6.037172 GGAAACTAATAATCACGTGTGCATCT 59.963 38.462 16.51 0.00 0.00 2.90
1330 1335 3.350219 AATATGAAACTCCACGCCTGT 57.650 42.857 0.00 0.00 0.00 4.00
1422 1427 7.677982 GCCCACTAAAATCAATCTAACGGTTAC 60.678 40.741 0.00 0.00 0.00 2.50
1453 1458 5.010719 ACATAGATCTAATACCACCACACGG 59.989 44.000 6.52 0.00 38.77 4.94
1458 1463 6.008331 AGCGTACATAGATCTAATACCACCA 58.992 40.000 6.52 0.00 0.00 4.17
1474 1479 2.416547 GCACATCTCACAAAGCGTACAT 59.583 45.455 0.00 0.00 0.00 2.29
1544 1549 3.797039 TCCGCCAAGATATCTGTTTCTG 58.203 45.455 5.86 0.00 0.00 3.02
1545 1550 3.706594 TCTCCGCCAAGATATCTGTTTCT 59.293 43.478 5.86 0.00 0.00 2.52
1546 1551 4.060038 TCTCCGCCAAGATATCTGTTTC 57.940 45.455 5.86 0.00 0.00 2.78
1547 1552 4.503991 GGATCTCCGCCAAGATATCTGTTT 60.504 45.833 5.86 0.00 36.13 2.83
1548 1553 3.007398 GGATCTCCGCCAAGATATCTGTT 59.993 47.826 5.86 0.00 36.13 3.16
1549 1554 2.564947 GGATCTCCGCCAAGATATCTGT 59.435 50.000 5.86 0.00 36.13 3.41
1550 1555 2.564504 TGGATCTCCGCCAAGATATCTG 59.435 50.000 5.86 0.76 36.13 2.90
1551 1556 2.894731 TGGATCTCCGCCAAGATATCT 58.105 47.619 0.00 0.00 36.13 1.98
1552 1557 3.450457 AGATGGATCTCCGCCAAGATATC 59.550 47.826 0.00 0.00 39.21 1.63
1553 1558 3.448934 AGATGGATCTCCGCCAAGATAT 58.551 45.455 0.00 0.00 39.21 1.63
1554 1559 2.828520 GAGATGGATCTCCGCCAAGATA 59.171 50.000 5.45 0.00 45.88 1.98
1555 1560 1.622811 GAGATGGATCTCCGCCAAGAT 59.377 52.381 5.45 0.00 45.88 2.40
1556 1561 1.043816 GAGATGGATCTCCGCCAAGA 58.956 55.000 5.45 0.00 45.88 3.02
1557 1562 3.603144 GAGATGGATCTCCGCCAAG 57.397 57.895 5.45 0.00 45.88 3.61
1565 1570 0.397675 TGCCCTGACGAGATGGATCT 60.398 55.000 0.00 0.00 40.50 2.75
1566 1571 0.033228 CTGCCCTGACGAGATGGATC 59.967 60.000 0.00 0.00 0.00 3.36
1567 1572 1.406065 CCTGCCCTGACGAGATGGAT 61.406 60.000 0.00 0.00 0.00 3.41
1568 1573 2.060383 CCTGCCCTGACGAGATGGA 61.060 63.158 0.00 0.00 0.00 3.41
1569 1574 2.503061 CCTGCCCTGACGAGATGG 59.497 66.667 0.00 0.00 0.00 3.51
1570 1575 1.395045 TAGCCTGCCCTGACGAGATG 61.395 60.000 0.00 0.00 0.00 2.90
1571 1576 0.687757 TTAGCCTGCCCTGACGAGAT 60.688 55.000 0.00 0.00 0.00 2.75
1572 1577 0.687757 ATTAGCCTGCCCTGACGAGA 60.688 55.000 0.00 0.00 0.00 4.04
1573 1578 0.249657 GATTAGCCTGCCCTGACGAG 60.250 60.000 0.00 0.00 0.00 4.18
1574 1579 1.686325 GGATTAGCCTGCCCTGACGA 61.686 60.000 0.00 0.00 0.00 4.20
1575 1580 1.227674 GGATTAGCCTGCCCTGACG 60.228 63.158 0.00 0.00 0.00 4.35
1576 1581 1.227674 CGGATTAGCCTGCCCTGAC 60.228 63.158 0.00 0.00 0.00 3.51
1577 1582 1.271840 AACGGATTAGCCTGCCCTGA 61.272 55.000 0.00 0.00 0.00 3.86
1578 1583 0.468226 TAACGGATTAGCCTGCCCTG 59.532 55.000 0.00 0.00 0.00 4.45
1579 1584 0.759346 CTAACGGATTAGCCTGCCCT 59.241 55.000 0.00 0.00 31.71 5.19
1580 1585 0.250338 CCTAACGGATTAGCCTGCCC 60.250 60.000 0.00 0.00 37.12 5.36
1581 1586 0.756903 TCCTAACGGATTAGCCTGCC 59.243 55.000 0.00 0.00 37.12 4.85
1582 1587 2.102588 TCTTCCTAACGGATTAGCCTGC 59.897 50.000 0.00 0.00 39.58 4.85
1583 1588 4.561105 GATCTTCCTAACGGATTAGCCTG 58.439 47.826 0.00 0.00 39.58 4.85
1584 1589 3.579151 GGATCTTCCTAACGGATTAGCCT 59.421 47.826 0.00 0.00 39.58 4.58
1585 1590 3.306849 GGGATCTTCCTAACGGATTAGCC 60.307 52.174 0.00 0.00 39.58 3.93
1586 1591 3.614390 CGGGATCTTCCTAACGGATTAGC 60.614 52.174 0.00 0.00 39.58 3.09
1587 1592 3.825014 TCGGGATCTTCCTAACGGATTAG 59.175 47.826 0.00 0.00 39.58 1.73
1588 1593 3.836146 TCGGGATCTTCCTAACGGATTA 58.164 45.455 0.00 0.00 39.58 1.75
1589 1594 2.674420 TCGGGATCTTCCTAACGGATT 58.326 47.619 0.00 0.00 39.58 3.01
1590 1595 2.376695 TCGGGATCTTCCTAACGGAT 57.623 50.000 0.00 0.00 39.58 4.18
1591 1596 2.236766 GATCGGGATCTTCCTAACGGA 58.763 52.381 1.43 0.00 36.57 4.69
1592 1597 1.068472 CGATCGGGATCTTCCTAACGG 60.068 57.143 7.38 0.00 36.57 4.44
1593 1598 1.607628 ACGATCGGGATCTTCCTAACG 59.392 52.381 20.98 0.00 36.57 3.18
1594 1599 2.361438 ACACGATCGGGATCTTCCTAAC 59.639 50.000 26.96 0.00 36.57 2.34
1595 1600 2.621998 GACACGATCGGGATCTTCCTAA 59.378 50.000 26.96 0.00 36.57 2.69
1596 1601 2.228059 GACACGATCGGGATCTTCCTA 58.772 52.381 26.96 0.00 36.57 2.94
1597 1602 1.033574 GACACGATCGGGATCTTCCT 58.966 55.000 26.96 0.00 36.57 3.36
1598 1603 0.744874 TGACACGATCGGGATCTTCC 59.255 55.000 26.96 6.07 35.72 3.46
1599 1604 1.866063 GCTGACACGATCGGGATCTTC 60.866 57.143 26.96 11.79 35.72 2.87
1600 1605 0.103208 GCTGACACGATCGGGATCTT 59.897 55.000 26.96 0.00 35.72 2.40
1601 1606 0.753479 AGCTGACACGATCGGGATCT 60.753 55.000 26.96 11.64 35.72 2.75
1602 1607 0.596083 CAGCTGACACGATCGGGATC 60.596 60.000 26.96 17.68 33.81 3.36
1603 1608 1.439228 CAGCTGACACGATCGGGAT 59.561 57.895 26.96 8.42 33.81 3.85
1604 1609 2.710902 CCAGCTGACACGATCGGGA 61.711 63.158 26.96 0.37 33.81 5.14
1605 1610 2.202797 CCAGCTGACACGATCGGG 60.203 66.667 17.58 17.58 33.81 5.14
1606 1611 1.517257 GACCAGCTGACACGATCGG 60.517 63.158 20.98 10.92 36.68 4.18
1607 1612 0.388520 TTGACCAGCTGACACGATCG 60.389 55.000 17.39 14.88 0.00 3.69
1608 1613 1.728971 CTTTGACCAGCTGACACGATC 59.271 52.381 17.39 3.36 0.00 3.69
1609 1614 1.070758 ACTTTGACCAGCTGACACGAT 59.929 47.619 17.39 0.30 0.00 3.73
1610 1615 0.464036 ACTTTGACCAGCTGACACGA 59.536 50.000 17.39 2.93 0.00 4.35
1611 1616 0.861837 GACTTTGACCAGCTGACACG 59.138 55.000 17.39 10.68 0.00 4.49
1612 1617 0.861837 CGACTTTGACCAGCTGACAC 59.138 55.000 17.39 6.55 0.00 3.67
1613 1618 0.464036 ACGACTTTGACCAGCTGACA 59.536 50.000 17.39 12.33 0.00 3.58
1614 1619 0.861837 CACGACTTTGACCAGCTGAC 59.138 55.000 17.39 9.61 0.00 3.51
1615 1620 0.249868 CCACGACTTTGACCAGCTGA 60.250 55.000 17.39 0.00 0.00 4.26
1616 1621 1.230635 CCCACGACTTTGACCAGCTG 61.231 60.000 6.78 6.78 0.00 4.24
1617 1622 1.071471 CCCACGACTTTGACCAGCT 59.929 57.895 0.00 0.00 0.00 4.24
1618 1623 1.070786 TCCCACGACTTTGACCAGC 59.929 57.895 0.00 0.00 0.00 4.85
1619 1624 2.914379 GTCCCACGACTTTGACCAG 58.086 57.895 0.00 0.00 35.99 4.00
1628 1633 1.321074 ATTCCTCCGAGTCCCACGAC 61.321 60.000 0.00 0.00 39.50 4.34
1629 1634 1.000019 ATTCCTCCGAGTCCCACGA 60.000 57.895 0.00 0.00 0.00 4.35
1630 1635 1.038130 AGATTCCTCCGAGTCCCACG 61.038 60.000 0.00 0.00 0.00 4.94
1631 1636 1.134670 CAAGATTCCTCCGAGTCCCAC 60.135 57.143 0.00 0.00 0.00 4.61
1632 1637 1.195115 CAAGATTCCTCCGAGTCCCA 58.805 55.000 0.00 0.00 0.00 4.37
1633 1638 0.466124 CCAAGATTCCTCCGAGTCCC 59.534 60.000 0.00 0.00 0.00 4.46
1634 1639 0.179070 GCCAAGATTCCTCCGAGTCC 60.179 60.000 0.00 0.00 0.00 3.85
1635 1640 0.528684 CGCCAAGATTCCTCCGAGTC 60.529 60.000 0.00 0.00 0.00 3.36
1636 1641 1.258445 ACGCCAAGATTCCTCCGAGT 61.258 55.000 0.00 0.00 0.00 4.18
1637 1642 0.807667 CACGCCAAGATTCCTCCGAG 60.808 60.000 0.00 0.00 0.00 4.63
1638 1643 1.218047 CACGCCAAGATTCCTCCGA 59.782 57.895 0.00 0.00 0.00 4.55
1639 1644 2.464459 GCACGCCAAGATTCCTCCG 61.464 63.158 0.00 0.00 0.00 4.63
1640 1645 1.372087 CTGCACGCCAAGATTCCTCC 61.372 60.000 0.00 0.00 0.00 4.30
1641 1646 1.986575 GCTGCACGCCAAGATTCCTC 61.987 60.000 0.00 0.00 0.00 3.71
1642 1647 2.042831 GCTGCACGCCAAGATTCCT 61.043 57.895 0.00 0.00 0.00 3.36
1643 1648 2.486966 GCTGCACGCCAAGATTCC 59.513 61.111 0.00 0.00 0.00 3.01
1652 1657 0.740868 TATCTCTTGTGGCTGCACGC 60.741 55.000 0.50 0.00 38.13 5.34
1653 1658 1.002366 GTATCTCTTGTGGCTGCACG 58.998 55.000 0.50 0.00 0.00 5.34
1654 1659 2.099141 TGTATCTCTTGTGGCTGCAC 57.901 50.000 0.50 0.00 0.00 4.57
1655 1660 3.354948 AATGTATCTCTTGTGGCTGCA 57.645 42.857 0.50 0.00 0.00 4.41
1656 1661 6.346919 CGTATAAATGTATCTCTTGTGGCTGC 60.347 42.308 0.00 0.00 0.00 5.25
1657 1662 6.346919 GCGTATAAATGTATCTCTTGTGGCTG 60.347 42.308 0.00 0.00 0.00 4.85
1658 1663 5.696724 GCGTATAAATGTATCTCTTGTGGCT 59.303 40.000 0.00 0.00 0.00 4.75
1659 1664 5.465390 TGCGTATAAATGTATCTCTTGTGGC 59.535 40.000 0.00 0.00 0.00 5.01
1660 1665 7.410835 CGATGCGTATAAATGTATCTCTTGTGG 60.411 40.741 0.00 0.00 33.06 4.17
1661 1666 7.326063 TCGATGCGTATAAATGTATCTCTTGTG 59.674 37.037 0.00 0.00 33.06 3.33
1662 1667 7.368059 TCGATGCGTATAAATGTATCTCTTGT 58.632 34.615 0.00 0.00 33.06 3.16
1663 1668 7.796958 TCGATGCGTATAAATGTATCTCTTG 57.203 36.000 0.00 0.00 33.06 3.02
1664 1669 8.988064 AATCGATGCGTATAAATGTATCTCTT 57.012 30.769 0.00 0.00 33.06 2.85
1671 1676 9.302345 CCTCTAATAATCGATGCGTATAAATGT 57.698 33.333 0.00 0.00 0.00 2.71
1672 1677 9.516314 TCCTCTAATAATCGATGCGTATAAATG 57.484 33.333 0.00 0.00 0.00 2.32
1674 1679 9.731819 GATCCTCTAATAATCGATGCGTATAAA 57.268 33.333 0.00 0.00 0.00 1.40
1675 1680 8.899771 TGATCCTCTAATAATCGATGCGTATAA 58.100 33.333 0.00 0.00 0.00 0.98
1676 1681 8.343366 GTGATCCTCTAATAATCGATGCGTATA 58.657 37.037 0.00 0.00 0.00 1.47
1677 1682 7.067615 AGTGATCCTCTAATAATCGATGCGTAT 59.932 37.037 0.00 0.00 0.00 3.06
1678 1683 6.374613 AGTGATCCTCTAATAATCGATGCGTA 59.625 38.462 0.00 0.00 0.00 4.42
1679 1684 5.184096 AGTGATCCTCTAATAATCGATGCGT 59.816 40.000 0.00 0.00 0.00 5.24
1680 1685 5.645624 AGTGATCCTCTAATAATCGATGCG 58.354 41.667 0.00 0.00 0.00 4.73
1681 1686 5.741510 CGAGTGATCCTCTAATAATCGATGC 59.258 44.000 0.00 0.00 38.11 3.91
1682 1687 5.741510 GCGAGTGATCCTCTAATAATCGATG 59.258 44.000 0.00 0.00 38.11 3.84
1683 1688 5.650266 AGCGAGTGATCCTCTAATAATCGAT 59.350 40.000 0.00 0.00 38.11 3.59
1684 1689 5.004448 AGCGAGTGATCCTCTAATAATCGA 58.996 41.667 0.00 0.00 38.11 3.59
1685 1690 5.303747 AGCGAGTGATCCTCTAATAATCG 57.696 43.478 8.86 0.00 38.11 3.34
1686 1691 7.990917 TGATAGCGAGTGATCCTCTAATAATC 58.009 38.462 8.86 6.11 38.11 1.75
1687 1692 7.946381 TGATAGCGAGTGATCCTCTAATAAT 57.054 36.000 8.86 0.00 38.11 1.28
1688 1693 7.761038 TTGATAGCGAGTGATCCTCTAATAA 57.239 36.000 8.86 0.00 38.11 1.40
1689 1694 7.946381 ATTGATAGCGAGTGATCCTCTAATA 57.054 36.000 8.86 1.75 38.11 0.98
1690 1695 6.849085 ATTGATAGCGAGTGATCCTCTAAT 57.151 37.500 8.86 1.71 38.11 1.73
1691 1696 7.946381 ATATTGATAGCGAGTGATCCTCTAA 57.054 36.000 8.86 0.00 38.11 2.10
1692 1697 8.669946 CTATATTGATAGCGAGTGATCCTCTA 57.330 38.462 8.86 0.00 38.11 2.43
1693 1698 7.566760 CTATATTGATAGCGAGTGATCCTCT 57.433 40.000 8.86 0.00 38.11 3.69
1706 1711 4.081972 ACTCAGGCACGGCTATATTGATAG 60.082 45.833 0.00 0.00 38.51 2.08
1707 1712 3.832490 ACTCAGGCACGGCTATATTGATA 59.168 43.478 0.00 0.00 0.00 2.15
1708 1713 2.634940 ACTCAGGCACGGCTATATTGAT 59.365 45.455 0.00 0.00 0.00 2.57
1709 1714 2.039418 ACTCAGGCACGGCTATATTGA 58.961 47.619 0.00 0.00 0.00 2.57
1710 1715 2.533266 ACTCAGGCACGGCTATATTG 57.467 50.000 0.00 0.00 0.00 1.90
1711 1716 3.467803 GAAACTCAGGCACGGCTATATT 58.532 45.455 0.00 0.00 0.00 1.28
1712 1717 2.224305 GGAAACTCAGGCACGGCTATAT 60.224 50.000 0.00 0.00 0.00 0.86
1713 1718 1.138266 GGAAACTCAGGCACGGCTATA 59.862 52.381 0.00 0.00 0.00 1.31
1714 1719 0.107654 GGAAACTCAGGCACGGCTAT 60.108 55.000 0.00 0.00 0.00 2.97
1715 1720 1.295423 GGAAACTCAGGCACGGCTA 59.705 57.895 0.00 0.00 0.00 3.93
1716 1721 2.032681 GGAAACTCAGGCACGGCT 59.967 61.111 0.00 0.00 0.00 5.52
1717 1722 0.392461 TATGGAAACTCAGGCACGGC 60.392 55.000 0.00 0.00 0.00 5.68
1718 1723 2.158900 AGATATGGAAACTCAGGCACGG 60.159 50.000 0.00 0.00 0.00 4.94
1719 1724 2.868583 CAGATATGGAAACTCAGGCACG 59.131 50.000 0.00 0.00 0.00 5.34
1720 1725 2.615912 GCAGATATGGAAACTCAGGCAC 59.384 50.000 0.00 0.00 0.00 5.01
1721 1726 2.507058 AGCAGATATGGAAACTCAGGCA 59.493 45.455 0.00 0.00 0.00 4.75
1722 1727 2.877168 CAGCAGATATGGAAACTCAGGC 59.123 50.000 0.00 0.00 0.00 4.85
1723 1728 2.877168 GCAGCAGATATGGAAACTCAGG 59.123 50.000 0.00 0.00 0.00 3.86
1724 1729 3.806380 AGCAGCAGATATGGAAACTCAG 58.194 45.455 0.00 0.00 0.00 3.35
1725 1730 3.920231 AGCAGCAGATATGGAAACTCA 57.080 42.857 0.00 0.00 0.00 3.41
1726 1731 4.637534 TGAAAGCAGCAGATATGGAAACTC 59.362 41.667 0.00 0.00 0.00 3.01
1727 1732 4.397417 GTGAAAGCAGCAGATATGGAAACT 59.603 41.667 0.00 0.00 0.00 2.66
1728 1733 4.156556 TGTGAAAGCAGCAGATATGGAAAC 59.843 41.667 0.00 0.00 0.00 2.78
1729 1734 4.334552 TGTGAAAGCAGCAGATATGGAAA 58.665 39.130 0.00 0.00 0.00 3.13
1730 1735 3.954200 TGTGAAAGCAGCAGATATGGAA 58.046 40.909 0.00 0.00 0.00 3.53
1731 1736 3.632643 TGTGAAAGCAGCAGATATGGA 57.367 42.857 0.00 0.00 0.00 3.41
1732 1737 3.550233 GCATGTGAAAGCAGCAGATATGG 60.550 47.826 0.00 0.00 0.00 2.74
1733 1738 3.315470 AGCATGTGAAAGCAGCAGATATG 59.685 43.478 0.00 0.00 0.00 1.78
1734 1739 3.315470 CAGCATGTGAAAGCAGCAGATAT 59.685 43.478 0.00 0.00 0.00 1.63
1735 1740 2.681344 CAGCATGTGAAAGCAGCAGATA 59.319 45.455 0.00 0.00 0.00 1.98
1736 1741 1.472878 CAGCATGTGAAAGCAGCAGAT 59.527 47.619 0.00 0.00 0.00 2.90
1737 1742 0.879090 CAGCATGTGAAAGCAGCAGA 59.121 50.000 0.00 0.00 0.00 4.26
1738 1743 0.732880 GCAGCATGTGAAAGCAGCAG 60.733 55.000 0.00 0.00 42.04 4.24
1739 1744 1.287815 GCAGCATGTGAAAGCAGCA 59.712 52.632 0.00 0.00 42.04 4.41
1740 1745 1.445582 GGCAGCATGTGAAAGCAGC 60.446 57.895 0.00 0.00 41.77 5.25
1741 1746 1.214589 GGGCAGCATGTGAAAGCAG 59.785 57.895 0.00 0.00 39.31 4.24
1742 1747 2.628696 CGGGCAGCATGTGAAAGCA 61.629 57.895 0.00 0.00 39.31 3.91
1743 1748 2.180017 CGGGCAGCATGTGAAAGC 59.820 61.111 0.00 0.00 39.31 3.51
1765 1770 1.208358 CCATGTGTGAACTGCGCAG 59.792 57.895 34.89 34.89 37.76 5.18
1766 1771 1.227793 TCCATGTGTGAACTGCGCA 60.228 52.632 10.98 10.98 33.90 6.09
1767 1772 1.207593 GTCCATGTGTGAACTGCGC 59.792 57.895 0.00 0.00 0.00 6.09
1768 1773 1.135888 CATGTCCATGTGTGAACTGCG 60.136 52.381 0.00 0.00 34.23 5.18
1769 1774 1.200716 CCATGTCCATGTGTGAACTGC 59.799 52.381 6.53 0.00 37.11 4.40
1770 1775 2.781923 TCCATGTCCATGTGTGAACTG 58.218 47.619 6.53 0.00 37.11 3.16
1771 1776 3.507162 TTCCATGTCCATGTGTGAACT 57.493 42.857 6.53 0.00 37.11 3.01
1772 1777 3.820467 TCTTTCCATGTCCATGTGTGAAC 59.180 43.478 6.53 0.00 37.11 3.18
1773 1778 4.074259 CTCTTTCCATGTCCATGTGTGAA 58.926 43.478 6.53 0.99 37.11 3.18
1774 1779 3.678289 CTCTTTCCATGTCCATGTGTGA 58.322 45.455 6.53 0.00 37.11 3.58
1775 1780 2.163010 GCTCTTTCCATGTCCATGTGTG 59.837 50.000 6.53 0.00 37.11 3.82
1776 1781 2.224843 TGCTCTTTCCATGTCCATGTGT 60.225 45.455 6.53 0.00 37.11 3.72
1777 1782 2.439409 TGCTCTTTCCATGTCCATGTG 58.561 47.619 6.53 0.00 37.11 3.21
1778 1783 2.885135 TGCTCTTTCCATGTCCATGT 57.115 45.000 6.53 0.00 37.11 3.21
1779 1784 4.524316 TTTTGCTCTTTCCATGTCCATG 57.476 40.909 0.14 0.14 38.51 3.66
1804 1809 9.403110 CGTGTTAACTTAGATTGTAGTAGTGTT 57.597 33.333 7.22 0.00 0.00 3.32
1805 1810 8.571336 ACGTGTTAACTTAGATTGTAGTAGTGT 58.429 33.333 7.22 0.00 0.00 3.55
1806 1811 8.961294 ACGTGTTAACTTAGATTGTAGTAGTG 57.039 34.615 7.22 0.00 0.00 2.74
1842 1847 8.242053 CGAGACTACCAACTACTTCATTAGAAA 58.758 37.037 0.00 0.00 32.35 2.52
1843 1848 7.392673 ACGAGACTACCAACTACTTCATTAGAA 59.607 37.037 0.00 0.00 0.00 2.10
1844 1849 6.883217 ACGAGACTACCAACTACTTCATTAGA 59.117 38.462 0.00 0.00 0.00 2.10
1845 1850 7.086230 ACGAGACTACCAACTACTTCATTAG 57.914 40.000 0.00 0.00 0.00 1.73
1846 1851 7.458409 AACGAGACTACCAACTACTTCATTA 57.542 36.000 0.00 0.00 0.00 1.90
1847 1852 5.979288 ACGAGACTACCAACTACTTCATT 57.021 39.130 0.00 0.00 0.00 2.57
1848 1853 5.979288 AACGAGACTACCAACTACTTCAT 57.021 39.130 0.00 0.00 0.00 2.57
1849 1854 5.533903 AGAAACGAGACTACCAACTACTTCA 59.466 40.000 0.00 0.00 0.00 3.02
1850 1855 6.011476 AGAAACGAGACTACCAACTACTTC 57.989 41.667 0.00 0.00 0.00 3.01
1851 1856 7.176340 ACATAGAAACGAGACTACCAACTACTT 59.824 37.037 0.00 0.00 0.00 2.24
1852 1857 6.658391 ACATAGAAACGAGACTACCAACTACT 59.342 38.462 0.00 0.00 0.00 2.57
1853 1858 6.850555 ACATAGAAACGAGACTACCAACTAC 58.149 40.000 0.00 0.00 0.00 2.73
1854 1859 7.458409 AACATAGAAACGAGACTACCAACTA 57.542 36.000 0.00 0.00 0.00 2.24
1855 1860 5.979288 ACATAGAAACGAGACTACCAACT 57.021 39.130 0.00 0.00 0.00 3.16
1856 1861 7.417496 AAAACATAGAAACGAGACTACCAAC 57.583 36.000 0.00 0.00 0.00 3.77
1879 1884 5.885449 AATCATGAAAGGTGGGACAAAAA 57.115 34.783 0.00 0.00 44.16 1.94
1880 1885 5.885449 AAATCATGAAAGGTGGGACAAAA 57.115 34.783 0.00 0.00 44.16 2.44
1881 1886 5.885449 AAAATCATGAAAGGTGGGACAAA 57.115 34.783 0.00 0.00 44.16 2.83
1882 1887 5.885449 AAAAATCATGAAAGGTGGGACAA 57.115 34.783 0.00 0.00 44.16 3.18
1902 1907 2.787035 AGGTGGAAGGAGGTACCAAAAA 59.213 45.455 15.94 0.00 42.04 1.94
1903 1908 2.424793 AGGTGGAAGGAGGTACCAAAA 58.575 47.619 15.94 0.00 42.04 2.44
1904 1909 2.127651 AGGTGGAAGGAGGTACCAAA 57.872 50.000 15.94 0.00 42.04 3.28
1905 1910 2.107552 CAAAGGTGGAAGGAGGTACCAA 59.892 50.000 15.94 0.00 42.04 3.67
1906 1911 1.702957 CAAAGGTGGAAGGAGGTACCA 59.297 52.381 15.94 0.00 42.04 3.25
1907 1912 1.613520 GCAAAGGTGGAAGGAGGTACC 60.614 57.143 2.73 2.73 39.35 3.34
1908 1913 1.351350 AGCAAAGGTGGAAGGAGGTAC 59.649 52.381 0.00 0.00 0.00 3.34
1909 1914 1.351017 CAGCAAAGGTGGAAGGAGGTA 59.649 52.381 0.00 0.00 0.00 3.08
1910 1915 0.111253 CAGCAAAGGTGGAAGGAGGT 59.889 55.000 0.00 0.00 0.00 3.85
1911 1916 2.952714 CAGCAAAGGTGGAAGGAGG 58.047 57.895 0.00 0.00 0.00 4.30
1919 1924 2.192624 CGAACAAAACCAGCAAAGGTG 58.807 47.619 0.00 0.00 42.25 4.00
1920 1925 1.822371 ACGAACAAAACCAGCAAAGGT 59.178 42.857 0.00 0.00 45.91 3.50
1921 1926 2.577449 ACGAACAAAACCAGCAAAGG 57.423 45.000 0.00 0.00 0.00 3.11
1922 1927 4.545823 TCTACGAACAAAACCAGCAAAG 57.454 40.909 0.00 0.00 0.00 2.77
1923 1928 5.508200 AATCTACGAACAAAACCAGCAAA 57.492 34.783 0.00 0.00 0.00 3.68
1924 1929 5.508200 AAATCTACGAACAAAACCAGCAA 57.492 34.783 0.00 0.00 0.00 3.91
1925 1930 5.508200 AAAATCTACGAACAAAACCAGCA 57.492 34.783 0.00 0.00 0.00 4.41
1949 1954 2.721906 AGTGAGGGAAGGGGATGAAAAA 59.278 45.455 0.00 0.00 0.00 1.94
1950 1955 2.358258 AGTGAGGGAAGGGGATGAAAA 58.642 47.619 0.00 0.00 0.00 2.29
1951 1956 2.059756 AGTGAGGGAAGGGGATGAAA 57.940 50.000 0.00 0.00 0.00 2.69
1952 1957 2.059756 AAGTGAGGGAAGGGGATGAA 57.940 50.000 0.00 0.00 0.00 2.57
1953 1958 2.059756 AAAGTGAGGGAAGGGGATGA 57.940 50.000 0.00 0.00 0.00 2.92
1954 1959 3.495100 CGATAAAGTGAGGGAAGGGGATG 60.495 52.174 0.00 0.00 0.00 3.51
1955 1960 2.706190 CGATAAAGTGAGGGAAGGGGAT 59.294 50.000 0.00 0.00 0.00 3.85
1956 1961 2.116238 CGATAAAGTGAGGGAAGGGGA 58.884 52.381 0.00 0.00 0.00 4.81
1957 1962 1.141053 CCGATAAAGTGAGGGAAGGGG 59.859 57.143 0.00 0.00 0.00 4.79
1958 1963 1.838077 ACCGATAAAGTGAGGGAAGGG 59.162 52.381 0.00 0.00 0.00 3.95
1959 1964 3.629142 AACCGATAAAGTGAGGGAAGG 57.371 47.619 0.00 0.00 0.00 3.46
1960 1965 7.625828 AAATAAACCGATAAAGTGAGGGAAG 57.374 36.000 0.00 0.00 0.00 3.46
1961 1966 8.301002 CAAAAATAAACCGATAAAGTGAGGGAA 58.699 33.333 0.00 0.00 0.00 3.97
1962 1967 7.576098 GCAAAAATAAACCGATAAAGTGAGGGA 60.576 37.037 0.00 0.00 0.00 4.20
1963 1968 6.530181 GCAAAAATAAACCGATAAAGTGAGGG 59.470 38.462 0.00 0.00 0.00 4.30
1964 1969 6.250527 CGCAAAAATAAACCGATAAAGTGAGG 59.749 38.462 0.00 0.00 0.00 3.86
1965 1970 6.799925 ACGCAAAAATAAACCGATAAAGTGAG 59.200 34.615 0.00 0.00 0.00 3.51
1966 1971 6.670233 ACGCAAAAATAAACCGATAAAGTGA 58.330 32.000 0.00 0.00 0.00 3.41
1967 1972 6.236838 CGACGCAAAAATAAACCGATAAAGTG 60.237 38.462 0.00 0.00 0.00 3.16
1968 1973 5.791480 CGACGCAAAAATAAACCGATAAAGT 59.209 36.000 0.00 0.00 0.00 2.66
1969 1974 5.275096 GCGACGCAAAAATAAACCGATAAAG 60.275 40.000 16.42 0.00 0.00 1.85
1970 1975 4.554200 GCGACGCAAAAATAAACCGATAAA 59.446 37.500 16.42 0.00 0.00 1.40
1971 1976 4.090034 GCGACGCAAAAATAAACCGATAA 58.910 39.130 16.42 0.00 0.00 1.75
1972 1977 3.485546 GGCGACGCAAAAATAAACCGATA 60.486 43.478 23.09 0.00 0.00 2.92
1973 1978 2.511879 GCGACGCAAAAATAAACCGAT 58.488 42.857 16.42 0.00 0.00 4.18
1974 1979 1.399984 GGCGACGCAAAAATAAACCGA 60.400 47.619 23.09 0.00 0.00 4.69
1975 1980 0.979098 GGCGACGCAAAAATAAACCG 59.021 50.000 23.09 0.00 0.00 4.44
1976 1981 2.053282 TGGCGACGCAAAAATAAACC 57.947 45.000 23.09 0.00 0.00 3.27
1977 1982 3.498082 AGATGGCGACGCAAAAATAAAC 58.502 40.909 23.09 0.76 0.00 2.01
1978 1983 3.189495 TGAGATGGCGACGCAAAAATAAA 59.811 39.130 23.09 0.00 0.00 1.40
1979 1984 2.744741 TGAGATGGCGACGCAAAAATAA 59.255 40.909 23.09 0.00 0.00 1.40
1980 1985 2.095213 GTGAGATGGCGACGCAAAAATA 59.905 45.455 23.09 0.28 0.00 1.40
1981 1986 1.135689 GTGAGATGGCGACGCAAAAAT 60.136 47.619 23.09 9.14 0.00 1.82
1982 1987 0.237235 GTGAGATGGCGACGCAAAAA 59.763 50.000 23.09 4.11 0.00 1.94
1983 1988 0.882484 TGTGAGATGGCGACGCAAAA 60.882 50.000 23.09 6.88 0.00 2.44
1984 1989 1.301322 TGTGAGATGGCGACGCAAA 60.301 52.632 23.09 9.71 0.00 3.68
1985 1990 2.027073 GTGTGAGATGGCGACGCAA 61.027 57.895 23.09 11.74 0.00 4.85
1986 1991 2.432456 GTGTGAGATGGCGACGCA 60.432 61.111 23.09 8.33 0.00 5.24
1987 1992 2.027073 TTGTGTGAGATGGCGACGC 61.027 57.895 12.43 12.43 0.00 5.19
1988 1993 1.781555 GTTGTGTGAGATGGCGACG 59.218 57.895 0.00 0.00 0.00 5.12
1989 1994 0.666274 TCGTTGTGTGAGATGGCGAC 60.666 55.000 0.00 0.00 0.00 5.19
1990 1995 0.032815 TTCGTTGTGTGAGATGGCGA 59.967 50.000 0.00 0.00 0.00 5.54
1991 1996 0.865111 TTTCGTTGTGTGAGATGGCG 59.135 50.000 0.00 0.00 0.00 5.69
1992 1997 2.143122 TCTTTCGTTGTGTGAGATGGC 58.857 47.619 0.00 0.00 0.00 4.40
1993 1998 4.811555 TTTCTTTCGTTGTGTGAGATGG 57.188 40.909 0.00 0.00 0.00 3.51
1994 1999 6.073602 TCAGATTTCTTTCGTTGTGTGAGATG 60.074 38.462 0.00 0.00 0.00 2.90
1995 2000 5.991606 TCAGATTTCTTTCGTTGTGTGAGAT 59.008 36.000 0.00 0.00 0.00 2.75
1996 2001 5.356426 TCAGATTTCTTTCGTTGTGTGAGA 58.644 37.500 0.00 0.00 0.00 3.27
1997 2002 5.657470 TCAGATTTCTTTCGTTGTGTGAG 57.343 39.130 0.00 0.00 0.00 3.51
1998 2003 5.352846 TGTTCAGATTTCTTTCGTTGTGTGA 59.647 36.000 0.00 0.00 0.00 3.58
1999 2004 5.568482 TGTTCAGATTTCTTTCGTTGTGTG 58.432 37.500 0.00 0.00 0.00 3.82
2000 2005 5.584649 TCTGTTCAGATTTCTTTCGTTGTGT 59.415 36.000 0.00 0.00 0.00 3.72
2001 2006 6.048073 TCTGTTCAGATTTCTTTCGTTGTG 57.952 37.500 0.00 0.00 0.00 3.33
2002 2007 6.867662 ATCTGTTCAGATTTCTTTCGTTGT 57.132 33.333 9.22 0.00 0.00 3.32
2003 2008 8.712363 TCTTATCTGTTCAGATTTCTTTCGTTG 58.288 33.333 18.43 1.47 0.00 4.10
2004 2009 8.833231 TCTTATCTGTTCAGATTTCTTTCGTT 57.167 30.769 18.43 0.00 0.00 3.85
2005 2010 8.713271 GTTCTTATCTGTTCAGATTTCTTTCGT 58.287 33.333 18.43 0.00 0.00 3.85
2006 2011 8.930760 AGTTCTTATCTGTTCAGATTTCTTTCG 58.069 33.333 18.43 3.27 0.00 3.46
2010 2015 9.225436 GGAAAGTTCTTATCTGTTCAGATTTCT 57.775 33.333 18.43 8.86 0.00 2.52
2011 2016 9.003658 TGGAAAGTTCTTATCTGTTCAGATTTC 57.996 33.333 18.43 14.26 0.00 2.17
2012 2017 8.924511 TGGAAAGTTCTTATCTGTTCAGATTT 57.075 30.769 18.43 7.58 0.00 2.17
2014 2019 9.606631 GTATGGAAAGTTCTTATCTGTTCAGAT 57.393 33.333 17.55 17.55 0.00 2.90
2015 2020 8.816894 AGTATGGAAAGTTCTTATCTGTTCAGA 58.183 33.333 4.96 4.96 0.00 3.27
2016 2021 8.877779 CAGTATGGAAAGTTCTTATCTGTTCAG 58.122 37.037 0.00 0.00 0.00 3.02
2017 2022 8.777865 CAGTATGGAAAGTTCTTATCTGTTCA 57.222 34.615 0.00 0.00 0.00 3.18
2036 2041 5.734855 ACTAAATAACTTGCGCCAGTATG 57.265 39.130 15.26 4.59 0.00 2.39
2037 2042 7.497909 ACATTACTAAATAACTTGCGCCAGTAT 59.502 33.333 15.26 7.89 0.00 2.12
2038 2043 6.819649 ACATTACTAAATAACTTGCGCCAGTA 59.180 34.615 15.26 4.09 0.00 2.74
2039 2044 5.646360 ACATTACTAAATAACTTGCGCCAGT 59.354 36.000 8.58 8.58 0.00 4.00
2040 2045 6.119144 ACATTACTAAATAACTTGCGCCAG 57.881 37.500 4.18 5.76 0.00 4.85
2041 2046 7.042950 TCTACATTACTAAATAACTTGCGCCA 58.957 34.615 4.18 0.00 0.00 5.69
2042 2047 7.473027 TCTACATTACTAAATAACTTGCGCC 57.527 36.000 4.18 0.00 0.00 6.53
2043 2048 9.582223 GATTCTACATTACTAAATAACTTGCGC 57.418 33.333 0.00 0.00 0.00 6.09
2109 2114 9.349713 TGTGATTGAGTGATTTAAGGTAAAGTT 57.650 29.630 0.00 0.00 0.00 2.66
2110 2115 8.918202 TGTGATTGAGTGATTTAAGGTAAAGT 57.082 30.769 0.00 0.00 0.00 2.66
2145 2150 9.489393 GAGCGATTTTTCTGAAAAACAATTTTT 57.511 25.926 25.58 11.67 44.93 1.94
2146 2151 8.663911 TGAGCGATTTTTCTGAAAAACAATTTT 58.336 25.926 25.58 12.29 42.57 1.82
2147 2152 8.195617 TGAGCGATTTTTCTGAAAAACAATTT 57.804 26.923 25.58 12.92 42.57 1.82
2148 2153 7.769272 TGAGCGATTTTTCTGAAAAACAATT 57.231 28.000 25.58 13.24 42.57 2.32
2149 2154 7.769272 TTGAGCGATTTTTCTGAAAAACAAT 57.231 28.000 25.58 13.56 42.57 2.71
2150 2155 7.490725 TGATTGAGCGATTTTTCTGAAAAACAA 59.509 29.630 25.58 22.84 42.57 2.83
2151 2156 6.977502 TGATTGAGCGATTTTTCTGAAAAACA 59.022 30.769 25.58 17.28 42.57 2.83
2152 2157 7.043458 TGTGATTGAGCGATTTTTCTGAAAAAC 60.043 33.333 25.58 18.61 42.57 2.43
2153 2158 6.977502 TGTGATTGAGCGATTTTTCTGAAAAA 59.022 30.769 25.35 25.35 43.76 1.94
2154 2159 6.502652 TGTGATTGAGCGATTTTTCTGAAAA 58.497 32.000 11.33 11.33 38.96 2.29
2155 2160 6.070897 TGTGATTGAGCGATTTTTCTGAAA 57.929 33.333 0.00 0.00 0.00 2.69
2156 2161 5.687770 TGTGATTGAGCGATTTTTCTGAA 57.312 34.783 0.00 0.00 0.00 3.02
2157 2162 5.885230 ATGTGATTGAGCGATTTTTCTGA 57.115 34.783 0.00 0.00 0.00 3.27
2158 2163 7.008628 GGTTAATGTGATTGAGCGATTTTTCTG 59.991 37.037 0.00 0.00 0.00 3.02
2159 2164 7.029563 GGTTAATGTGATTGAGCGATTTTTCT 58.970 34.615 0.00 0.00 0.00 2.52
2160 2165 7.029563 AGGTTAATGTGATTGAGCGATTTTTC 58.970 34.615 0.00 0.00 32.35 2.29
2161 2166 6.924111 AGGTTAATGTGATTGAGCGATTTTT 58.076 32.000 0.00 0.00 32.35 1.94
2162 2167 6.515272 AGGTTAATGTGATTGAGCGATTTT 57.485 33.333 0.00 0.00 32.35 1.82
2163 2168 6.515272 AAGGTTAATGTGATTGAGCGATTT 57.485 33.333 0.00 0.00 32.35 2.17
2164 2169 6.038271 GGTAAGGTTAATGTGATTGAGCGATT 59.962 38.462 0.00 0.00 32.35 3.34
2165 2170 5.527582 GGTAAGGTTAATGTGATTGAGCGAT 59.472 40.000 0.00 0.00 32.35 4.58
2166 2171 4.873827 GGTAAGGTTAATGTGATTGAGCGA 59.126 41.667 0.00 0.00 32.35 4.93
2167 2172 4.876107 AGGTAAGGTTAATGTGATTGAGCG 59.124 41.667 0.00 0.00 32.35 5.03
2168 2173 6.759497 AAGGTAAGGTTAATGTGATTGAGC 57.241 37.500 0.00 0.00 0.00 4.26
2169 2174 9.449719 AGTTAAGGTAAGGTTAATGTGATTGAG 57.550 33.333 0.00 0.00 0.00 3.02
2170 2175 9.444600 GAGTTAAGGTAAGGTTAATGTGATTGA 57.555 33.333 0.00 0.00 0.00 2.57
2171 2176 9.226606 TGAGTTAAGGTAAGGTTAATGTGATTG 57.773 33.333 0.00 0.00 0.00 2.67
2172 2177 9.975218 ATGAGTTAAGGTAAGGTTAATGTGATT 57.025 29.630 0.00 0.00 0.00 2.57
2173 2178 9.396022 CATGAGTTAAGGTAAGGTTAATGTGAT 57.604 33.333 0.00 0.00 0.00 3.06
2174 2179 7.827236 CCATGAGTTAAGGTAAGGTTAATGTGA 59.173 37.037 0.00 0.00 0.00 3.58
2175 2180 7.827236 TCCATGAGTTAAGGTAAGGTTAATGTG 59.173 37.037 0.00 0.00 0.00 3.21
2176 2181 7.924541 TCCATGAGTTAAGGTAAGGTTAATGT 58.075 34.615 0.00 0.00 0.00 2.71
2177 2182 8.840321 CATCCATGAGTTAAGGTAAGGTTAATG 58.160 37.037 0.00 0.00 0.00 1.90
2178 2183 7.998964 CCATCCATGAGTTAAGGTAAGGTTAAT 59.001 37.037 0.00 0.00 0.00 1.40
2179 2184 7.037153 ACCATCCATGAGTTAAGGTAAGGTTAA 60.037 37.037 0.00 0.00 0.00 2.01
2180 2185 6.445786 ACCATCCATGAGTTAAGGTAAGGTTA 59.554 38.462 0.00 0.00 0.00 2.85
2181 2186 5.253096 ACCATCCATGAGTTAAGGTAAGGTT 59.747 40.000 0.00 0.00 0.00 3.50
2182 2187 4.788617 ACCATCCATGAGTTAAGGTAAGGT 59.211 41.667 0.00 0.00 0.00 3.50
2183 2188 5.373812 ACCATCCATGAGTTAAGGTAAGG 57.626 43.478 0.00 0.00 0.00 2.69
2184 2189 8.210946 TGATTACCATCCATGAGTTAAGGTAAG 58.789 37.037 0.00 0.00 41.69 2.34
2185 2190 8.096621 TGATTACCATCCATGAGTTAAGGTAA 57.903 34.615 0.00 0.00 42.33 2.85
2186 2191 7.684317 TGATTACCATCCATGAGTTAAGGTA 57.316 36.000 0.00 0.00 0.00 3.08
2187 2192 6.575244 TGATTACCATCCATGAGTTAAGGT 57.425 37.500 0.00 0.00 0.00 3.50
2188 2193 7.941238 AGATTGATTACCATCCATGAGTTAAGG 59.059 37.037 0.00 0.00 0.00 2.69
2189 2194 8.915057 AGATTGATTACCATCCATGAGTTAAG 57.085 34.615 0.00 0.00 0.00 1.85
2190 2195 9.342308 GAAGATTGATTACCATCCATGAGTTAA 57.658 33.333 0.00 0.00 0.00 2.01
2191 2196 8.493607 TGAAGATTGATTACCATCCATGAGTTA 58.506 33.333 0.00 0.00 0.00 2.24
2192 2197 7.348815 TGAAGATTGATTACCATCCATGAGTT 58.651 34.615 0.00 0.00 0.00 3.01
2193 2198 6.903516 TGAAGATTGATTACCATCCATGAGT 58.096 36.000 0.00 0.00 0.00 3.41
2194 2199 7.812690 TTGAAGATTGATTACCATCCATGAG 57.187 36.000 0.00 0.00 0.00 2.90
2195 2200 7.614974 TGTTTGAAGATTGATTACCATCCATGA 59.385 33.333 0.00 0.00 0.00 3.07
2196 2201 7.774134 TGTTTGAAGATTGATTACCATCCATG 58.226 34.615 0.00 0.00 0.00 3.66
2197 2202 7.959658 TGTTTGAAGATTGATTACCATCCAT 57.040 32.000 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.