Multiple sequence alignment - TraesCS2A01G375800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G375800 chr2A 100.000 3026 0 0 1 3026 618042685 618039660 0.000000e+00 5589.0
1 TraesCS2A01G375800 chr2A 85.686 999 138 3 1034 2031 617956284 617955290 0.000000e+00 1048.0
2 TraesCS2A01G375800 chr2D 91.620 1945 112 28 152 2063 476261687 476259761 0.000000e+00 2641.0
3 TraesCS2A01G375800 chr2D 86.587 999 129 3 1034 2031 476039692 476038698 0.000000e+00 1098.0
4 TraesCS2A01G375800 chr2D 89.053 338 34 3 2689 3024 476259614 476259278 1.680000e-112 416.0
5 TraesCS2A01G375800 chr2D 91.026 156 7 3 2526 2680 476259742 476259593 1.420000e-48 204.0
6 TraesCS2A01G375800 chr2B 89.848 1714 100 34 387 2063 556982532 556980856 0.000000e+00 2134.0
7 TraesCS2A01G375800 chr2B 85.628 995 138 3 1034 2027 556847344 556846354 0.000000e+00 1040.0
8 TraesCS2A01G375800 chr2B 92.800 125 8 1 2556 2680 556980792 556980669 2.400000e-41 180.0
9 TraesCS2A01G375800 chr3A 81.329 948 162 11 1089 2031 12491848 12490911 0.000000e+00 756.0
10 TraesCS2A01G375800 chr3A 92.308 182 12 1 2064 2243 78529646 78529465 1.080000e-64 257.0
11 TraesCS2A01G375800 chr1A 92.818 181 9 2 2063 2240 44475869 44476048 2.990000e-65 259.0
12 TraesCS2A01G375800 chr5A 91.444 187 12 3 2064 2248 101083274 101083458 1.390000e-63 254.0
13 TraesCS2A01G375800 chr5A 90.860 186 12 2 2062 2243 29678148 29678332 8.380000e-61 244.0
14 TraesCS2A01G375800 chr5A 88.384 198 18 4 2056 2250 104247457 104247652 1.810000e-57 233.0
15 TraesCS2A01G375800 chr5A 77.124 306 49 12 1 295 642502136 642501841 1.120000e-34 158.0
16 TraesCS2A01G375800 chr3B 77.829 433 74 17 1 418 564200445 564200870 6.480000e-62 248.0
17 TraesCS2A01G375800 chr3B 76.855 337 53 19 1 326 147491083 147490761 1.870000e-37 167.0
18 TraesCS2A01G375800 chr3B 100.000 39 0 0 95 133 742159996 742160034 4.180000e-09 73.1
19 TraesCS2A01G375800 chr4D 89.796 196 14 6 2054 2244 456251044 456251238 2.330000e-61 246.0
20 TraesCS2A01G375800 chr7A 90.426 188 14 4 2064 2248 701212113 701211927 8.380000e-61 244.0
21 TraesCS2A01G375800 chr6D 90.761 184 15 1 2064 2247 370692198 370692017 8.380000e-61 244.0
22 TraesCS2A01G375800 chr6D 90.374 187 13 3 2062 2244 445581440 445581625 1.080000e-59 241.0
23 TraesCS2A01G375800 chr6B 78.212 358 59 12 1 343 30127932 30128285 8.500000e-51 211.0
24 TraesCS2A01G375800 chr7B 75.561 446 83 13 9 430 619168407 619168850 2.380000e-46 196.0
25 TraesCS2A01G375800 chr5D 78.361 305 48 10 1 295 514294055 514293759 6.660000e-42 182.0
26 TraesCS2A01G375800 chr5D 75.692 325 47 14 1 314 543671265 543671568 1.890000e-27 134.0
27 TraesCS2A01G375800 chr5B 77.778 324 50 13 1 314 645993791 645994102 2.400000e-41 180.0
28 TraesCS2A01G375800 chr5B 95.000 40 2 0 94 133 645994061 645994100 2.520000e-06 63.9
29 TraesCS2A01G375800 chr4A 76.327 245 47 8 79 314 625466831 625466589 1.470000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G375800 chr2A 618039660 618042685 3025 True 5589 5589 100.000000 1 3026 1 chr2A.!!$R2 3025
1 TraesCS2A01G375800 chr2A 617955290 617956284 994 True 1048 1048 85.686000 1034 2031 1 chr2A.!!$R1 997
2 TraesCS2A01G375800 chr2D 476038698 476039692 994 True 1098 1098 86.587000 1034 2031 1 chr2D.!!$R1 997
3 TraesCS2A01G375800 chr2D 476259278 476261687 2409 True 1087 2641 90.566333 152 3024 3 chr2D.!!$R2 2872
4 TraesCS2A01G375800 chr2B 556980669 556982532 1863 True 1157 2134 91.324000 387 2680 2 chr2B.!!$R2 2293
5 TraesCS2A01G375800 chr2B 556846354 556847344 990 True 1040 1040 85.628000 1034 2027 1 chr2B.!!$R1 993
6 TraesCS2A01G375800 chr3A 12490911 12491848 937 True 756 756 81.329000 1089 2031 1 chr3A.!!$R1 942

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
446 458 0.036577 GCGAGCAGGCATATGGAGAT 60.037 55.0 4.56 0.0 0.0 2.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2310 2365 0.03101 AGAGGCCGGGGTTAATCTCT 60.031 55.0 2.18 0.0 0.0 3.1 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 1.863267 AGATGTTGCATAGCTCGCTC 58.137 50.000 9.26 3.96 0.00 5.03
21 22 1.411977 AGATGTTGCATAGCTCGCTCT 59.588 47.619 9.26 1.58 0.00 4.09
22 23 1.526041 GATGTTGCATAGCTCGCTCTG 59.474 52.381 9.26 0.00 0.00 3.35
23 24 1.086067 TGTTGCATAGCTCGCTCTGC 61.086 55.000 18.75 18.75 43.58 4.26
25 26 4.115279 GCATAGCTCGCTCTGCAA 57.885 55.556 20.11 0.00 43.04 4.08
26 27 1.640604 GCATAGCTCGCTCTGCAAC 59.359 57.895 20.11 0.00 43.04 4.17
27 28 1.086067 GCATAGCTCGCTCTGCAACA 61.086 55.000 20.11 0.00 43.04 3.33
28 29 1.362768 CATAGCTCGCTCTGCAACAA 58.637 50.000 0.00 0.00 0.00 2.83
29 30 1.938577 CATAGCTCGCTCTGCAACAAT 59.061 47.619 0.00 0.00 0.00 2.71
30 31 2.099141 TAGCTCGCTCTGCAACAATT 57.901 45.000 0.00 0.00 0.00 2.32
31 32 0.520404 AGCTCGCTCTGCAACAATTG 59.480 50.000 3.24 3.24 0.00 2.32
54 55 2.296658 GTTGCAAACCACCAAAGCG 58.703 52.632 0.00 0.00 42.21 4.68
55 56 0.459411 GTTGCAAACCACCAAAGCGT 60.459 50.000 0.00 0.00 42.21 5.07
56 57 0.247736 TTGCAAACCACCAAAGCGTT 59.752 45.000 0.00 0.00 0.00 4.84
57 58 1.103803 TGCAAACCACCAAAGCGTTA 58.896 45.000 0.00 0.00 0.00 3.18
58 59 1.683917 TGCAAACCACCAAAGCGTTAT 59.316 42.857 0.00 0.00 0.00 1.89
59 60 2.101582 TGCAAACCACCAAAGCGTTATT 59.898 40.909 0.00 0.00 0.00 1.40
60 61 3.127589 GCAAACCACCAAAGCGTTATTT 58.872 40.909 0.00 0.00 0.00 1.40
61 62 3.558006 GCAAACCACCAAAGCGTTATTTT 59.442 39.130 0.00 0.00 0.00 1.82
62 63 4.318475 GCAAACCACCAAAGCGTTATTTTC 60.318 41.667 0.00 0.00 0.00 2.29
63 64 4.929819 AACCACCAAAGCGTTATTTTCT 57.070 36.364 0.00 0.00 0.00 2.52
64 65 4.499037 ACCACCAAAGCGTTATTTTCTC 57.501 40.909 0.00 0.00 0.00 2.87
65 66 3.254903 ACCACCAAAGCGTTATTTTCTCC 59.745 43.478 0.00 0.00 0.00 3.71
66 67 3.366985 CCACCAAAGCGTTATTTTCTCCC 60.367 47.826 0.00 0.00 0.00 4.30
67 68 3.254657 CACCAAAGCGTTATTTTCTCCCA 59.745 43.478 0.00 0.00 0.00 4.37
68 69 3.892588 ACCAAAGCGTTATTTTCTCCCAA 59.107 39.130 0.00 0.00 0.00 4.12
69 70 4.342665 ACCAAAGCGTTATTTTCTCCCAAA 59.657 37.500 0.00 0.00 0.00 3.28
70 71 5.163395 ACCAAAGCGTTATTTTCTCCCAAAA 60.163 36.000 0.00 0.00 0.00 2.44
71 72 5.176774 CCAAAGCGTTATTTTCTCCCAAAAC 59.823 40.000 0.00 0.00 0.00 2.43
72 73 5.784578 AAGCGTTATTTTCTCCCAAAACT 57.215 34.783 0.00 0.00 0.00 2.66
73 74 5.784578 AGCGTTATTTTCTCCCAAAACTT 57.215 34.783 0.00 0.00 0.00 2.66
74 75 6.156748 AGCGTTATTTTCTCCCAAAACTTT 57.843 33.333 0.00 0.00 0.00 2.66
75 76 6.578944 AGCGTTATTTTCTCCCAAAACTTTT 58.421 32.000 0.00 0.00 0.00 2.27
76 77 7.718525 AGCGTTATTTTCTCCCAAAACTTTTA 58.281 30.769 0.00 0.00 0.00 1.52
77 78 7.865889 AGCGTTATTTTCTCCCAAAACTTTTAG 59.134 33.333 0.00 0.00 0.00 1.85
78 79 7.650504 GCGTTATTTTCTCCCAAAACTTTTAGT 59.349 33.333 0.00 0.00 0.00 2.24
79 80 9.524106 CGTTATTTTCTCCCAAAACTTTTAGTT 57.476 29.630 0.00 0.00 40.80 2.24
123 124 4.248691 CATAGATGATGTTGCGAGAGGA 57.751 45.455 0.00 0.00 0.00 3.71
124 125 2.593346 AGATGATGTTGCGAGAGGAC 57.407 50.000 0.00 0.00 0.00 3.85
125 126 2.106566 AGATGATGTTGCGAGAGGACT 58.893 47.619 0.00 0.00 0.00 3.85
126 127 2.499289 AGATGATGTTGCGAGAGGACTT 59.501 45.455 0.00 0.00 0.00 3.01
127 128 2.839486 TGATGTTGCGAGAGGACTTT 57.161 45.000 0.00 0.00 0.00 2.66
128 129 3.126001 TGATGTTGCGAGAGGACTTTT 57.874 42.857 0.00 0.00 0.00 2.27
129 130 2.807967 TGATGTTGCGAGAGGACTTTTG 59.192 45.455 0.00 0.00 0.00 2.44
130 131 0.944386 TGTTGCGAGAGGACTTTTGC 59.056 50.000 0.00 0.00 0.00 3.68
131 132 0.944386 GTTGCGAGAGGACTTTTGCA 59.056 50.000 0.98 0.98 0.00 4.08
132 133 1.333619 GTTGCGAGAGGACTTTTGCAA 59.666 47.619 12.06 12.06 37.01 4.08
133 134 1.896220 TGCGAGAGGACTTTTGCAAT 58.104 45.000 0.00 0.00 0.00 3.56
134 135 3.052455 TGCGAGAGGACTTTTGCAATA 57.948 42.857 0.00 0.00 0.00 1.90
135 136 3.002791 TGCGAGAGGACTTTTGCAATAG 58.997 45.455 14.46 14.46 0.00 1.73
136 137 3.262420 GCGAGAGGACTTTTGCAATAGA 58.738 45.455 21.69 1.07 0.00 1.98
137 138 3.062774 GCGAGAGGACTTTTGCAATAGAC 59.937 47.826 21.69 15.65 0.00 2.59
138 139 3.304559 CGAGAGGACTTTTGCAATAGACG 59.695 47.826 21.69 12.69 0.00 4.18
139 140 4.246458 GAGAGGACTTTTGCAATAGACGT 58.754 43.478 21.69 16.77 0.00 4.34
140 141 3.997021 AGAGGACTTTTGCAATAGACGTG 59.003 43.478 21.69 0.00 0.00 4.49
141 142 3.074412 AGGACTTTTGCAATAGACGTGG 58.926 45.455 21.69 0.00 0.00 4.94
142 143 2.414161 GGACTTTTGCAATAGACGTGGC 60.414 50.000 21.69 0.00 0.00 5.01
143 144 1.196808 ACTTTTGCAATAGACGTGGCG 59.803 47.619 21.69 0.00 0.00 5.69
144 145 1.196808 CTTTTGCAATAGACGTGGCGT 59.803 47.619 11.05 0.00 45.10 5.68
152 153 3.335534 GACGTGGCGTCGCAGTTT 61.336 61.111 20.50 0.00 46.56 2.66
153 154 2.877974 GACGTGGCGTCGCAGTTTT 61.878 57.895 20.50 0.00 46.56 2.43
154 155 2.326550 CGTGGCGTCGCAGTTTTT 59.673 55.556 20.50 0.00 0.00 1.94
191 192 6.676237 TTTTTCAGCATAGACGATATTGCA 57.324 33.333 0.00 0.00 37.56 4.08
197 198 3.306364 GCATAGACGATATTGCAGGAGGT 60.306 47.826 0.00 0.00 35.22 3.85
248 252 7.624360 AAATTACACCGAAAAGCTGATATCA 57.376 32.000 5.07 5.07 0.00 2.15
249 253 7.807977 AATTACACCGAAAAGCTGATATCAT 57.192 32.000 5.72 0.00 0.00 2.45
250 254 7.807977 ATTACACCGAAAAGCTGATATCATT 57.192 32.000 5.72 0.00 0.00 2.57
251 255 7.624360 TTACACCGAAAAGCTGATATCATTT 57.376 32.000 5.72 4.17 0.00 2.32
252 256 5.883661 ACACCGAAAAGCTGATATCATTTG 58.116 37.500 5.72 1.71 0.00 2.32
273 277 5.766150 TGTGGTGTGAATCGAGAAATTTT 57.234 34.783 0.00 0.00 0.00 1.82
286 290 7.433708 TCGAGAAATTTTTGCAACAGAGATA 57.566 32.000 0.00 0.00 0.00 1.98
303 307 1.668751 GATAATGTTGCGCGGAAGGAA 59.331 47.619 15.16 2.63 0.00 3.36
308 312 1.880675 TGTTGCGCGGAAGGAATTTTA 59.119 42.857 15.16 0.00 0.00 1.52
338 343 4.709886 GGCCCTTGTTGTGGAAAGTATAAT 59.290 41.667 0.00 0.00 0.00 1.28
361 366 1.535833 ATATCGTCGGAAGGAGCGAT 58.464 50.000 5.88 5.88 39.98 4.58
362 367 0.873054 TATCGTCGGAAGGAGCGATC 59.127 55.000 4.06 0.00 38.70 3.69
365 370 1.511305 GTCGGAAGGAGCGATCACA 59.489 57.895 1.84 0.00 0.00 3.58
420 432 2.821366 GATGGTGGCTGGAGCACG 60.821 66.667 0.20 0.00 44.36 5.34
446 458 0.036577 GCGAGCAGGCATATGGAGAT 60.037 55.000 4.56 0.00 0.00 2.75
450 462 0.694771 GCAGGCATATGGAGATGGGA 59.305 55.000 4.56 0.00 0.00 4.37
453 465 3.836146 CAGGCATATGGAGATGGGAAAA 58.164 45.455 4.56 0.00 0.00 2.29
454 466 3.825014 CAGGCATATGGAGATGGGAAAAG 59.175 47.826 4.56 0.00 0.00 2.27
455 467 3.160269 GGCATATGGAGATGGGAAAAGG 58.840 50.000 4.56 0.00 0.00 3.11
495 510 0.836400 AGAGGAGAAAGGACGGCCAA 60.836 55.000 11.69 0.00 36.29 4.52
507 522 3.637273 GGCCAACGGTGTCCTCCT 61.637 66.667 0.00 0.00 0.00 3.69
553 568 1.961277 GCGGCTTGCAGTAGTGTGT 60.961 57.895 0.00 0.00 45.45 3.72
558 573 2.338500 GCTTGCAGTAGTGTGTAGGAC 58.662 52.381 0.00 0.00 0.00 3.85
570 585 1.448013 GTAGGACGACTGGCTTGCC 60.448 63.158 4.43 4.43 0.00 4.52
598 613 4.451150 TGGCGTGTGGCGATCCTC 62.451 66.667 0.00 0.00 44.92 3.71
614 629 2.359975 TCGAGCACGGCTGAGAGA 60.360 61.111 0.00 0.00 39.88 3.10
619 634 0.901124 AGCACGGCTGAGAGAAAGAT 59.099 50.000 0.00 0.00 37.57 2.40
620 635 1.005340 GCACGGCTGAGAGAAAGATG 58.995 55.000 0.00 0.00 0.00 2.90
650 665 8.461033 AGAGTAGATAAGGATAAGGACAAGGAT 58.539 37.037 0.00 0.00 0.00 3.24
677 692 0.165944 GTTGCTCGGTCCATTTCACG 59.834 55.000 0.00 0.00 0.00 4.35
698 740 2.350522 CAGGACACAGTGCCTGTAATC 58.649 52.381 24.92 6.28 43.43 1.75
719 765 3.072476 TCCAGTGACGGAAATCTTTTCCT 59.928 43.478 15.09 4.64 36.45 3.36
731 777 8.333186 CGGAAATCTTTTCCTATTAAACTACGG 58.667 37.037 15.09 0.00 36.45 4.02
794 840 4.196193 TGTTGTCTTGTTTGGAGACGAAT 58.804 39.130 0.00 0.00 45.05 3.34
831 877 6.698008 TTGATGTGGCGATAAGAAAATGAT 57.302 33.333 0.00 0.00 0.00 2.45
836 882 6.321717 TGTGGCGATAAGAAAATGATTTGTC 58.678 36.000 0.00 0.00 0.00 3.18
837 883 5.452302 GTGGCGATAAGAAAATGATTTGTCG 59.548 40.000 0.00 0.00 0.00 4.35
838 884 5.352846 TGGCGATAAGAAAATGATTTGTCGA 59.647 36.000 6.76 0.00 0.00 4.20
839 885 6.038161 TGGCGATAAGAAAATGATTTGTCGAT 59.962 34.615 6.76 3.84 0.00 3.59
840 886 6.575201 GGCGATAAGAAAATGATTTGTCGATC 59.425 38.462 6.76 9.10 0.00 3.69
862 909 1.001181 AGTTGTGTATACGCCGTGGTT 59.999 47.619 13.71 0.00 0.00 3.67
922 969 0.390340 TGTGCATCGCCACTCTTCTC 60.390 55.000 0.00 0.00 36.68 2.87
923 970 0.108424 GTGCATCGCCACTCTTCTCT 60.108 55.000 0.00 0.00 33.02 3.10
978 1033 3.392616 ACCTTATCCCTGCTCATACCTTG 59.607 47.826 0.00 0.00 0.00 3.61
1013 1068 1.831736 CCGTACAATGTCCTCCTCCTT 59.168 52.381 0.00 0.00 0.00 3.36
1027 1082 2.935481 CCTTCTCCACCCCAGCCA 60.935 66.667 0.00 0.00 0.00 4.75
1031 1086 0.846427 TTCTCCACCCCAGCCATTCT 60.846 55.000 0.00 0.00 0.00 2.40
1175 1230 2.294078 GGTACAGCACCCTGCCTCT 61.294 63.158 0.00 0.00 46.52 3.69
1342 1397 2.359975 GCCACCCCTTCAACTCCG 60.360 66.667 0.00 0.00 0.00 4.63
1513 1568 3.561217 ATCGTGTACGTGTGCCGCA 62.561 57.895 0.00 0.00 41.42 5.69
1527 1582 2.637025 CGCAACCCAAAGGACACG 59.363 61.111 0.00 0.00 36.73 4.49
1992 2047 1.935933 AGATTGACGCCATTACCGAC 58.064 50.000 0.00 0.00 0.00 4.79
2006 2061 1.810030 CCGACGCTAAGTTCAGGGC 60.810 63.158 0.00 0.00 31.94 5.19
2051 2106 3.121944 GCATTCGATATCCACGTGTCATC 59.878 47.826 15.65 12.15 0.00 2.92
2054 2109 2.890945 TCGATATCCACGTGTCATCCAT 59.109 45.455 15.65 0.00 0.00 3.41
2055 2110 4.076394 TCGATATCCACGTGTCATCCATA 58.924 43.478 15.65 1.47 0.00 2.74
2056 2111 4.705023 TCGATATCCACGTGTCATCCATAT 59.295 41.667 15.65 6.03 0.00 1.78
2057 2112 5.185056 TCGATATCCACGTGTCATCCATATT 59.815 40.000 15.65 0.00 0.00 1.28
2058 2113 5.516696 CGATATCCACGTGTCATCCATATTC 59.483 44.000 15.65 0.00 0.00 1.75
2059 2114 3.092334 TCCACGTGTCATCCATATTCG 57.908 47.619 15.65 0.00 0.00 3.34
2060 2115 1.526887 CCACGTGTCATCCATATTCGC 59.473 52.381 15.65 0.00 0.00 4.70
2061 2116 2.200899 CACGTGTCATCCATATTCGCA 58.799 47.619 7.58 0.00 0.00 5.10
2062 2117 2.802247 CACGTGTCATCCATATTCGCAT 59.198 45.455 7.58 0.00 0.00 4.73
2063 2118 3.059884 ACGTGTCATCCATATTCGCATC 58.940 45.455 0.00 0.00 0.00 3.91
2064 2119 3.059166 CGTGTCATCCATATTCGCATCA 58.941 45.455 0.00 0.00 0.00 3.07
2065 2120 3.122445 CGTGTCATCCATATTCGCATCAG 59.878 47.826 0.00 0.00 0.00 2.90
2066 2121 4.060900 GTGTCATCCATATTCGCATCAGT 58.939 43.478 0.00 0.00 0.00 3.41
2067 2122 4.512944 GTGTCATCCATATTCGCATCAGTT 59.487 41.667 0.00 0.00 0.00 3.16
2068 2123 5.008019 GTGTCATCCATATTCGCATCAGTTT 59.992 40.000 0.00 0.00 0.00 2.66
2069 2124 5.007921 TGTCATCCATATTCGCATCAGTTTG 59.992 40.000 0.00 0.00 0.00 2.93
2070 2125 5.008019 GTCATCCATATTCGCATCAGTTTGT 59.992 40.000 0.00 0.00 0.00 2.83
2071 2126 5.237127 TCATCCATATTCGCATCAGTTTGTC 59.763 40.000 0.00 0.00 0.00 3.18
2072 2127 4.769688 TCCATATTCGCATCAGTTTGTCT 58.230 39.130 0.00 0.00 0.00 3.41
2073 2128 5.912892 TCCATATTCGCATCAGTTTGTCTA 58.087 37.500 0.00 0.00 0.00 2.59
2074 2129 6.345298 TCCATATTCGCATCAGTTTGTCTAA 58.655 36.000 0.00 0.00 0.00 2.10
2075 2130 6.992123 TCCATATTCGCATCAGTTTGTCTAAT 59.008 34.615 0.00 0.00 0.00 1.73
2076 2131 7.498900 TCCATATTCGCATCAGTTTGTCTAATT 59.501 33.333 0.00 0.00 0.00 1.40
2077 2132 7.800380 CCATATTCGCATCAGTTTGTCTAATTC 59.200 37.037 0.00 0.00 0.00 2.17
2078 2133 6.741992 ATTCGCATCAGTTTGTCTAATTCA 57.258 33.333 0.00 0.00 0.00 2.57
2079 2134 5.530519 TCGCATCAGTTTGTCTAATTCAC 57.469 39.130 0.00 0.00 0.00 3.18
2080 2135 4.994217 TCGCATCAGTTTGTCTAATTCACA 59.006 37.500 0.00 0.00 0.00 3.58
2081 2136 5.643348 TCGCATCAGTTTGTCTAATTCACAT 59.357 36.000 0.00 0.00 0.00 3.21
2082 2137 5.961843 CGCATCAGTTTGTCTAATTCACATC 59.038 40.000 0.00 0.00 0.00 3.06
2083 2138 6.183360 CGCATCAGTTTGTCTAATTCACATCT 60.183 38.462 0.00 0.00 0.00 2.90
2084 2139 7.010460 CGCATCAGTTTGTCTAATTCACATCTA 59.990 37.037 0.00 0.00 0.00 1.98
2085 2140 8.668353 GCATCAGTTTGTCTAATTCACATCTAA 58.332 33.333 0.00 0.00 0.00 2.10
2116 2171 9.847224 TTTTTAAGGATGTCATATCTAACCTCC 57.153 33.333 0.00 0.00 32.24 4.30
2117 2172 7.554959 TTAAGGATGTCATATCTAACCTCCC 57.445 40.000 0.00 0.00 32.42 4.30
2118 2173 5.093236 AGGATGTCATATCTAACCTCCCA 57.907 43.478 0.00 0.00 32.42 4.37
2119 2174 5.669857 AGGATGTCATATCTAACCTCCCAT 58.330 41.667 0.00 0.00 32.42 4.00
2120 2175 6.815880 AGGATGTCATATCTAACCTCCCATA 58.184 40.000 0.00 0.00 32.42 2.74
2121 2176 7.256399 AGGATGTCATATCTAACCTCCCATAA 58.744 38.462 0.00 0.00 32.42 1.90
2122 2177 7.739444 AGGATGTCATATCTAACCTCCCATAAA 59.261 37.037 0.00 0.00 32.42 1.40
2123 2178 8.552296 GGATGTCATATCTAACCTCCCATAAAT 58.448 37.037 0.00 0.00 0.00 1.40
2193 2248 9.949174 AAAACCATAAACAAAATGAAAATCAGC 57.051 25.926 0.00 0.00 0.00 4.26
2194 2249 8.907222 AACCATAAACAAAATGAAAATCAGCT 57.093 26.923 0.00 0.00 0.00 4.24
2195 2250 8.907222 ACCATAAACAAAATGAAAATCAGCTT 57.093 26.923 0.00 0.00 0.00 3.74
2196 2251 9.995003 ACCATAAACAAAATGAAAATCAGCTTA 57.005 25.926 0.00 0.00 0.00 3.09
2201 2256 9.768662 AAACAAAATGAAAATCAGCTTAGATGT 57.231 25.926 0.00 0.00 0.00 3.06
2202 2257 8.752766 ACAAAATGAAAATCAGCTTAGATGTG 57.247 30.769 0.00 0.00 0.00 3.21
2203 2258 8.579006 ACAAAATGAAAATCAGCTTAGATGTGA 58.421 29.630 0.00 0.00 0.00 3.58
2204 2259 8.857216 CAAAATGAAAATCAGCTTAGATGTGAC 58.143 33.333 0.00 0.00 0.00 3.67
2205 2260 7.692460 AATGAAAATCAGCTTAGATGTGACA 57.308 32.000 0.00 0.00 0.00 3.58
2206 2261 7.876936 ATGAAAATCAGCTTAGATGTGACAT 57.123 32.000 0.00 0.00 0.00 3.06
2207 2262 8.969260 ATGAAAATCAGCTTAGATGTGACATA 57.031 30.769 0.00 0.00 0.00 2.29
2208 2263 8.791327 TGAAAATCAGCTTAGATGTGACATAA 57.209 30.769 0.00 0.00 0.00 1.90
2209 2264 8.668353 TGAAAATCAGCTTAGATGTGACATAAC 58.332 33.333 0.00 0.00 0.00 1.89
2210 2265 8.798859 AAAATCAGCTTAGATGTGACATAACT 57.201 30.769 0.00 0.00 0.00 2.24
2211 2266 9.890629 AAAATCAGCTTAGATGTGACATAACTA 57.109 29.630 0.00 0.00 0.00 2.24
2213 2268 9.486497 AATCAGCTTAGATGTGACATAACTATG 57.514 33.333 0.00 0.92 39.55 2.23
2229 2284 9.890629 ACATAACTATGTCACATCTAAATGTGT 57.109 29.630 15.86 2.84 45.53 3.72
2241 2296 8.324163 ACATCTAAATGTGTTCTAAACAGACC 57.676 34.615 0.00 0.00 44.51 3.85
2242 2297 7.390718 ACATCTAAATGTGTTCTAAACAGACCC 59.609 37.037 0.00 0.00 44.51 4.46
2260 2315 1.538204 CCCTATTCGCATACGTGTGCT 60.538 52.381 30.48 17.34 42.88 4.40
2265 2320 0.109039 TCGCATACGTGTGCTGCTAA 60.109 50.000 30.48 11.32 42.88 3.09
2280 2335 7.011389 GTGTGCTGCTAATATATGTCAACAAGA 59.989 37.037 0.00 0.00 0.00 3.02
2291 2346 1.604278 GTCAACAAGACAACAGGGAGC 59.396 52.381 0.00 0.00 46.77 4.70
2292 2347 0.588252 CAACAAGACAACAGGGAGCG 59.412 55.000 0.00 0.00 0.00 5.03
2293 2348 0.535102 AACAAGACAACAGGGAGCGG 60.535 55.000 0.00 0.00 0.00 5.52
2294 2349 2.032681 AAGACAACAGGGAGCGGC 59.967 61.111 0.00 0.00 0.00 6.53
2295 2350 2.818169 AAGACAACAGGGAGCGGCA 61.818 57.895 1.45 0.00 0.00 5.69
2296 2351 2.045926 GACAACAGGGAGCGGCAT 60.046 61.111 1.45 0.00 0.00 4.40
2297 2352 1.675641 GACAACAGGGAGCGGCATT 60.676 57.895 1.45 0.00 0.00 3.56
2298 2353 1.228552 ACAACAGGGAGCGGCATTT 60.229 52.632 1.45 0.00 0.00 2.32
2299 2354 0.827507 ACAACAGGGAGCGGCATTTT 60.828 50.000 1.45 0.00 0.00 1.82
2300 2355 0.318120 CAACAGGGAGCGGCATTTTT 59.682 50.000 1.45 0.00 0.00 1.94
2324 2379 7.457024 TTTTAGAAAAAGAGATTAACCCCGG 57.543 36.000 0.00 0.00 0.00 5.73
2325 2380 3.353557 AGAAAAAGAGATTAACCCCGGC 58.646 45.455 0.00 0.00 0.00 6.13
2326 2381 2.139323 AAAAGAGATTAACCCCGGCC 57.861 50.000 0.00 0.00 0.00 6.13
2327 2382 1.296002 AAAGAGATTAACCCCGGCCT 58.704 50.000 0.00 0.00 0.00 5.19
2328 2383 0.837940 AAGAGATTAACCCCGGCCTC 59.162 55.000 0.00 0.00 0.00 4.70
2329 2384 0.031010 AGAGATTAACCCCGGCCTCT 60.031 55.000 0.00 0.00 0.00 3.69
2330 2385 0.106894 GAGATTAACCCCGGCCTCTG 59.893 60.000 0.00 0.00 0.00 3.35
2331 2386 1.526225 GATTAACCCCGGCCTCTGC 60.526 63.158 0.00 0.00 0.00 4.26
2332 2387 2.265467 GATTAACCCCGGCCTCTGCA 62.265 60.000 0.00 0.00 40.13 4.41
2333 2388 1.645402 ATTAACCCCGGCCTCTGCAT 61.645 55.000 0.00 0.00 40.13 3.96
2334 2389 2.265467 TTAACCCCGGCCTCTGCATC 62.265 60.000 0.00 0.00 40.13 3.91
2337 2392 3.933722 CCCGGCCTCTGCATCGAT 61.934 66.667 0.00 0.00 40.13 3.59
2338 2393 2.664185 CCGGCCTCTGCATCGATG 60.664 66.667 21.27 21.27 40.13 3.84
2357 2412 9.715123 CATCGATGCACACAGTTATTTTATTAA 57.285 29.630 13.37 0.00 0.00 1.40
2358 2413 9.935682 ATCGATGCACACAGTTATTTTATTAAG 57.064 29.630 0.00 0.00 0.00 1.85
2359 2414 9.157104 TCGATGCACACAGTTATTTTATTAAGA 57.843 29.630 0.00 0.00 0.00 2.10
2360 2415 9.767684 CGATGCACACAGTTATTTTATTAAGAA 57.232 29.630 0.00 0.00 0.00 2.52
2382 2437 8.940397 AGAAAATAGGTTCAAAAATCTCCTCA 57.060 30.769 0.00 0.00 0.00 3.86
2383 2438 9.367160 AGAAAATAGGTTCAAAAATCTCCTCAA 57.633 29.630 0.00 0.00 0.00 3.02
2384 2439 9.631452 GAAAATAGGTTCAAAAATCTCCTCAAG 57.369 33.333 0.00 0.00 0.00 3.02
2385 2440 8.712228 AAATAGGTTCAAAAATCTCCTCAAGT 57.288 30.769 0.00 0.00 0.00 3.16
2386 2441 9.807921 AAATAGGTTCAAAAATCTCCTCAAGTA 57.192 29.630 0.00 0.00 0.00 2.24
2387 2442 9.454859 AATAGGTTCAAAAATCTCCTCAAGTAG 57.545 33.333 0.00 0.00 0.00 2.57
2388 2443 6.842676 AGGTTCAAAAATCTCCTCAAGTAGT 58.157 36.000 0.00 0.00 0.00 2.73
2389 2444 6.937465 AGGTTCAAAAATCTCCTCAAGTAGTC 59.063 38.462 0.00 0.00 0.00 2.59
2390 2445 6.937465 GGTTCAAAAATCTCCTCAAGTAGTCT 59.063 38.462 0.00 0.00 0.00 3.24
2391 2446 7.118535 GGTTCAAAAATCTCCTCAAGTAGTCTC 59.881 40.741 0.00 0.00 0.00 3.36
2392 2447 7.303182 TCAAAAATCTCCTCAAGTAGTCTCA 57.697 36.000 0.00 0.00 0.00 3.27
2393 2448 7.735917 TCAAAAATCTCCTCAAGTAGTCTCAA 58.264 34.615 0.00 0.00 0.00 3.02
2394 2449 8.210946 TCAAAAATCTCCTCAAGTAGTCTCAAA 58.789 33.333 0.00 0.00 0.00 2.69
2395 2450 8.840321 CAAAAATCTCCTCAAGTAGTCTCAAAA 58.160 33.333 0.00 0.00 0.00 2.44
2396 2451 8.614469 AAAATCTCCTCAAGTAGTCTCAAAAG 57.386 34.615 0.00 0.00 0.00 2.27
2397 2452 7.546250 AATCTCCTCAAGTAGTCTCAAAAGA 57.454 36.000 0.00 0.00 0.00 2.52
2398 2453 7.732222 ATCTCCTCAAGTAGTCTCAAAAGAT 57.268 36.000 0.00 0.00 33.08 2.40
2399 2454 7.164230 TCTCCTCAAGTAGTCTCAAAAGATC 57.836 40.000 0.00 0.00 33.08 2.75
2400 2455 6.721668 TCTCCTCAAGTAGTCTCAAAAGATCA 59.278 38.462 0.00 0.00 33.08 2.92
2401 2456 7.398618 TCTCCTCAAGTAGTCTCAAAAGATCAT 59.601 37.037 0.00 0.00 33.08 2.45
2402 2457 7.326454 TCCTCAAGTAGTCTCAAAAGATCATG 58.674 38.462 0.00 0.00 33.08 3.07
2403 2458 7.179160 TCCTCAAGTAGTCTCAAAAGATCATGA 59.821 37.037 0.00 0.00 33.08 3.07
2404 2459 7.821359 CCTCAAGTAGTCTCAAAAGATCATGAA 59.179 37.037 0.00 0.00 33.08 2.57
2405 2460 8.768957 TCAAGTAGTCTCAAAAGATCATGAAG 57.231 34.615 0.00 0.00 33.08 3.02
2406 2461 8.588472 TCAAGTAGTCTCAAAAGATCATGAAGA 58.412 33.333 0.00 0.00 33.08 2.87
2407 2462 9.212641 CAAGTAGTCTCAAAAGATCATGAAGAA 57.787 33.333 0.00 0.00 33.08 2.52
2408 2463 9.434420 AAGTAGTCTCAAAAGATCATGAAGAAG 57.566 33.333 0.00 0.00 33.08 2.85
2409 2464 6.740411 AGTCTCAAAAGATCATGAAGAAGC 57.260 37.500 0.00 0.00 33.08 3.86
2410 2465 6.236409 AGTCTCAAAAGATCATGAAGAAGCA 58.764 36.000 0.00 0.00 33.08 3.91
2411 2466 6.713903 AGTCTCAAAAGATCATGAAGAAGCAA 59.286 34.615 0.00 0.00 33.08 3.91
2412 2467 7.230108 AGTCTCAAAAGATCATGAAGAAGCAAA 59.770 33.333 0.00 0.00 33.08 3.68
2413 2468 8.027771 GTCTCAAAAGATCATGAAGAAGCAAAT 58.972 33.333 0.00 0.00 33.08 2.32
2414 2469 8.027189 TCTCAAAAGATCATGAAGAAGCAAATG 58.973 33.333 0.00 0.00 0.00 2.32
2415 2470 6.588756 TCAAAAGATCATGAAGAAGCAAATGC 59.411 34.615 0.00 0.00 42.49 3.56
2416 2471 4.650754 AGATCATGAAGAAGCAAATGCC 57.349 40.909 0.00 0.00 43.38 4.40
2417 2472 4.021229 AGATCATGAAGAAGCAAATGCCA 58.979 39.130 0.00 0.00 43.38 4.92
2418 2473 3.581024 TCATGAAGAAGCAAATGCCAC 57.419 42.857 0.94 0.00 43.38 5.01
2419 2474 2.892215 TCATGAAGAAGCAAATGCCACA 59.108 40.909 0.94 0.00 43.38 4.17
2420 2475 2.798976 TGAAGAAGCAAATGCCACAC 57.201 45.000 0.94 0.00 43.38 3.82
2421 2476 1.001487 TGAAGAAGCAAATGCCACACG 60.001 47.619 0.94 0.00 43.38 4.49
2422 2477 0.318955 AAGAAGCAAATGCCACACGC 60.319 50.000 0.94 0.00 43.38 5.34
2423 2478 2.050168 AAGCAAATGCCACACGCG 60.050 55.556 3.53 3.53 43.38 6.01
2424 2479 3.556543 AAGCAAATGCCACACGCGG 62.557 57.895 12.47 1.27 43.38 6.46
2432 2487 2.338257 CCACACGCGGCCAAAAAT 59.662 55.556 12.47 0.00 0.00 1.82
2433 2488 1.581954 CCACACGCGGCCAAAAATA 59.418 52.632 12.47 0.00 0.00 1.40
2434 2489 0.172352 CCACACGCGGCCAAAAATAT 59.828 50.000 12.47 0.00 0.00 1.28
2435 2490 1.402259 CCACACGCGGCCAAAAATATA 59.598 47.619 12.47 0.00 0.00 0.86
2436 2491 2.159366 CCACACGCGGCCAAAAATATAA 60.159 45.455 12.47 0.00 0.00 0.98
2437 2492 3.502920 CACACGCGGCCAAAAATATAAA 58.497 40.909 12.47 0.00 0.00 1.40
2438 2493 3.921021 CACACGCGGCCAAAAATATAAAA 59.079 39.130 12.47 0.00 0.00 1.52
2439 2494 4.386049 CACACGCGGCCAAAAATATAAAAA 59.614 37.500 12.47 0.00 0.00 1.94
2440 2495 5.062809 CACACGCGGCCAAAAATATAAAAAT 59.937 36.000 12.47 0.00 0.00 1.82
2441 2496 5.062809 ACACGCGGCCAAAAATATAAAAATG 59.937 36.000 12.47 0.00 0.00 2.32
2442 2497 5.062809 CACGCGGCCAAAAATATAAAAATGT 59.937 36.000 12.47 0.00 0.00 2.71
2443 2498 5.289917 ACGCGGCCAAAAATATAAAAATGTC 59.710 36.000 12.47 0.00 0.00 3.06
2444 2499 5.289675 CGCGGCCAAAAATATAAAAATGTCA 59.710 36.000 2.24 0.00 0.00 3.58
2445 2500 6.474364 GCGGCCAAAAATATAAAAATGTCAC 58.526 36.000 2.24 0.00 0.00 3.67
2446 2501 6.091441 GCGGCCAAAAATATAAAAATGTCACA 59.909 34.615 2.24 0.00 0.00 3.58
2447 2502 7.360438 GCGGCCAAAAATATAAAAATGTCACAA 60.360 33.333 2.24 0.00 0.00 3.33
2448 2503 7.954786 CGGCCAAAAATATAAAAATGTCACAAC 59.045 33.333 2.24 0.00 0.00 3.32
2449 2504 8.233868 GGCCAAAAATATAAAAATGTCACAACC 58.766 33.333 0.00 0.00 0.00 3.77
2450 2505 7.954786 GCCAAAAATATAAAAATGTCACAACCG 59.045 33.333 0.00 0.00 0.00 4.44
2451 2506 8.439286 CCAAAAATATAAAAATGTCACAACCGG 58.561 33.333 0.00 0.00 0.00 5.28
2452 2507 7.589574 AAAATATAAAAATGTCACAACCGGC 57.410 32.000 0.00 0.00 0.00 6.13
2453 2508 6.524101 AATATAAAAATGTCACAACCGGCT 57.476 33.333 0.00 0.00 0.00 5.52
2454 2509 7.633193 AATATAAAAATGTCACAACCGGCTA 57.367 32.000 0.00 0.00 0.00 3.93
2455 2510 7.817418 ATATAAAAATGTCACAACCGGCTAT 57.183 32.000 0.00 0.00 0.00 2.97
2456 2511 8.911918 ATATAAAAATGTCACAACCGGCTATA 57.088 30.769 0.00 0.00 0.00 1.31
2457 2512 5.968528 AAAAATGTCACAACCGGCTATAA 57.031 34.783 0.00 0.00 0.00 0.98
2458 2513 6.524101 AAAAATGTCACAACCGGCTATAAT 57.476 33.333 0.00 0.00 0.00 1.28
2459 2514 7.633193 AAAAATGTCACAACCGGCTATAATA 57.367 32.000 0.00 0.00 0.00 0.98
2460 2515 7.633193 AAAATGTCACAACCGGCTATAATAA 57.367 32.000 0.00 0.00 0.00 1.40
2461 2516 7.633193 AAATGTCACAACCGGCTATAATAAA 57.367 32.000 0.00 0.00 0.00 1.40
2462 2517 7.817418 AATGTCACAACCGGCTATAATAAAT 57.183 32.000 0.00 0.00 0.00 1.40
2463 2518 7.817418 ATGTCACAACCGGCTATAATAAATT 57.183 32.000 0.00 0.00 0.00 1.82
2464 2519 8.911918 ATGTCACAACCGGCTATAATAAATTA 57.088 30.769 0.00 0.00 0.00 1.40
2465 2520 8.734218 TGTCACAACCGGCTATAATAAATTAA 57.266 30.769 0.00 0.00 0.00 1.40
2466 2521 8.832521 TGTCACAACCGGCTATAATAAATTAAG 58.167 33.333 0.00 0.00 0.00 1.85
2467 2522 9.048446 GTCACAACCGGCTATAATAAATTAAGA 57.952 33.333 0.00 0.00 0.00 2.10
2468 2523 9.787435 TCACAACCGGCTATAATAAATTAAGAT 57.213 29.630 0.00 0.00 0.00 2.40
2497 2552 5.831702 ACACCTAGTCTATTACTGAACCG 57.168 43.478 0.00 0.00 39.39 4.44
2498 2553 5.259632 ACACCTAGTCTATTACTGAACCGT 58.740 41.667 0.00 0.00 39.39 4.83
2499 2554 5.356470 ACACCTAGTCTATTACTGAACCGTC 59.644 44.000 0.00 0.00 39.39 4.79
2500 2555 5.356190 CACCTAGTCTATTACTGAACCGTCA 59.644 44.000 0.00 0.00 39.39 4.35
2501 2556 6.039493 CACCTAGTCTATTACTGAACCGTCAT 59.961 42.308 0.00 0.00 39.39 3.06
2502 2557 6.262720 ACCTAGTCTATTACTGAACCGTCATC 59.737 42.308 0.00 0.00 39.39 2.92
2503 2558 6.487331 CCTAGTCTATTACTGAACCGTCATCT 59.513 42.308 0.00 0.00 39.39 2.90
2504 2559 7.660617 CCTAGTCTATTACTGAACCGTCATCTA 59.339 40.741 0.00 0.00 39.39 1.98
2505 2560 9.221933 CTAGTCTATTACTGAACCGTCATCTAT 57.778 37.037 0.00 0.00 39.39 1.98
2507 2562 9.742144 AGTCTATTACTGAACCGTCATCTATAT 57.258 33.333 0.00 0.00 36.93 0.86
2508 2563 9.991388 GTCTATTACTGAACCGTCATCTATATC 57.009 37.037 0.00 0.00 31.85 1.63
2509 2564 9.734984 TCTATTACTGAACCGTCATCTATATCA 57.265 33.333 0.00 0.00 31.85 2.15
2510 2565 9.995957 CTATTACTGAACCGTCATCTATATCAG 57.004 37.037 0.00 0.00 38.91 2.90
2511 2566 7.818997 TTACTGAACCGTCATCTATATCAGT 57.181 36.000 10.02 10.02 45.57 3.41
2512 2567 6.716934 ACTGAACCGTCATCTATATCAGTT 57.283 37.500 0.00 0.00 42.28 3.16
2513 2568 6.507900 ACTGAACCGTCATCTATATCAGTTG 58.492 40.000 0.00 0.00 42.28 3.16
2514 2569 6.096987 ACTGAACCGTCATCTATATCAGTTGT 59.903 38.462 0.00 0.00 42.28 3.32
2515 2570 7.284716 ACTGAACCGTCATCTATATCAGTTGTA 59.715 37.037 0.00 0.00 42.28 2.41
2516 2571 8.178313 TGAACCGTCATCTATATCAGTTGTAT 57.822 34.615 0.00 0.00 0.00 2.29
2517 2572 9.292195 TGAACCGTCATCTATATCAGTTGTATA 57.708 33.333 0.00 0.00 0.00 1.47
2533 2588 9.511144 TCAGTTGTATATATCACGTGTAACAAG 57.489 33.333 16.51 7.56 35.74 3.16
2539 2594 0.753867 TCACGTGTAACAAGGGAGCA 59.246 50.000 16.51 0.00 35.74 4.26
2565 2620 9.037737 AGCATATTGTGTTGATATTGAAATTGC 57.962 29.630 0.00 0.00 0.00 3.56
2648 2717 4.120589 CGCTAGTCCCATTTTAGAACTCC 58.879 47.826 0.00 0.00 0.00 3.85
2649 2718 4.120589 GCTAGTCCCATTTTAGAACTCCG 58.879 47.826 0.00 0.00 0.00 4.63
2656 2725 5.007682 CCCATTTTAGAACTCCGGAAGAAA 58.992 41.667 5.23 1.00 0.00 2.52
2657 2726 5.475564 CCCATTTTAGAACTCCGGAAGAAAA 59.524 40.000 5.23 8.19 0.00 2.29
2658 2727 6.015772 CCCATTTTAGAACTCCGGAAGAAAAA 60.016 38.462 5.23 8.73 0.00 1.94
2684 2753 9.732130 AAATAGAGATGCTTATACATTTCCCTC 57.268 33.333 0.00 0.00 32.89 4.30
2685 2754 6.120507 AGAGATGCTTATACATTTCCCTCC 57.879 41.667 0.00 0.00 32.89 4.30
2686 2755 5.608437 AGAGATGCTTATACATTTCCCTCCA 59.392 40.000 0.00 0.00 32.89 3.86
2687 2756 6.101734 AGAGATGCTTATACATTTCCCTCCAA 59.898 38.462 0.00 0.00 32.89 3.53
2738 2807 8.053963 AGCCTCTAAATACTACACTCAACTCTA 58.946 37.037 0.00 0.00 0.00 2.43
2759 2828 8.637986 ACTCTAATAGCAACCTTCATCTTCTAG 58.362 37.037 0.00 0.00 0.00 2.43
2774 2843 4.600062 TCTTCTAGCCCCCATTTTTCTTC 58.400 43.478 0.00 0.00 0.00 2.87
2783 2852 3.701542 CCCCATTTTTCTTCCCTAAGAGC 59.298 47.826 0.00 0.00 42.60 4.09
2787 2856 5.068329 CCATTTTTCTTCCCTAAGAGCATCC 59.932 44.000 0.00 0.00 42.60 3.51
2788 2857 3.933861 TTTCTTCCCTAAGAGCATCCC 57.066 47.619 0.00 0.00 42.60 3.85
2813 2882 2.100584 CAGATCTGCTATATCCTCGCCC 59.899 54.545 10.38 0.00 0.00 6.13
2814 2883 1.066303 GATCTGCTATATCCTCGCCCG 59.934 57.143 0.00 0.00 0.00 6.13
2815 2884 0.251209 TCTGCTATATCCTCGCCCGT 60.251 55.000 0.00 0.00 0.00 5.28
2816 2885 0.603569 CTGCTATATCCTCGCCCGTT 59.396 55.000 0.00 0.00 0.00 4.44
2839 2908 7.201513 CGTTCCTTATAATTCCGACGGTTTTAA 60.202 37.037 14.79 6.84 0.00 1.52
2844 2913 9.481800 CTTATAATTCCGACGGTTTTAAAGTTC 57.518 33.333 14.79 0.00 0.00 3.01
2857 2926 7.542824 CGGTTTTAAAGTTCTTGACCTTTTTCA 59.457 33.333 0.00 0.00 0.00 2.69
2887 2956 1.107945 AATCCCGTAAAAATGGCCCG 58.892 50.000 0.00 0.00 0.00 6.13
2888 2957 0.256464 ATCCCGTAAAAATGGCCCGA 59.744 50.000 0.00 0.00 0.00 5.14
2892 2961 0.961358 CGTAAAAATGGCCCGACCCA 60.961 55.000 0.00 0.00 39.65 4.51
2899 2968 2.470057 ATGGCCCGACCCATAAAAAT 57.530 45.000 0.00 0.00 43.65 1.82
2904 2973 3.639561 GGCCCGACCCATAAAAATTATGT 59.360 43.478 8.75 0.00 0.00 2.29
2914 2983 1.314730 AAAATTATGTAGGCGGCCCG 58.685 50.000 17.02 0.00 35.76 6.13
2931 3001 4.440829 GCAAATCCCCCTCCGCCA 62.441 66.667 0.00 0.00 0.00 5.69
2932 3002 2.440247 CAAATCCCCCTCCGCCAC 60.440 66.667 0.00 0.00 0.00 5.01
2935 3005 4.741239 ATCCCCCTCCGCCACTGT 62.741 66.667 0.00 0.00 0.00 3.55
2941 3011 0.104304 CCCTCCGCCACTGTATGTAC 59.896 60.000 0.00 0.00 0.00 2.90
2942 3012 0.821517 CCTCCGCCACTGTATGTACA 59.178 55.000 0.00 0.00 34.56 2.90
2971 3042 1.796459 CGTTTTAGGGTTCACGTCCTG 59.204 52.381 3.85 0.00 34.75 3.86
2975 3046 1.481871 TAGGGTTCACGTCCTGGATC 58.518 55.000 0.00 0.00 34.75 3.36
3007 3078 2.416701 CCTCCAGCGTCTTCTTTCTCTC 60.417 54.545 0.00 0.00 0.00 3.20
3011 3082 2.096248 AGCGTCTTCTTTCTCTCCGAT 58.904 47.619 0.00 0.00 0.00 4.18
3015 3086 3.443976 GTCTTCTTTCTCTCCGATGAGC 58.556 50.000 0.00 0.00 38.58 4.26
3020 3091 3.131223 TCTTTCTCTCCGATGAGCGATTT 59.869 43.478 0.00 0.00 44.57 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.411977 AGAGCGAGCTATGCAACATCT 59.588 47.619 12.48 4.11 33.85 2.90
2 3 1.526041 CAGAGCGAGCTATGCAACATC 59.474 52.381 12.48 2.01 33.85 3.06
3 4 1.579698 CAGAGCGAGCTATGCAACAT 58.420 50.000 12.48 0.00 33.85 2.71
9 10 1.362768 TTGTTGCAGAGCGAGCTATG 58.637 50.000 14.61 14.61 38.21 2.23
10 11 2.322355 ATTGTTGCAGAGCGAGCTAT 57.678 45.000 0.00 0.00 0.00 2.97
11 12 1.733912 CAATTGTTGCAGAGCGAGCTA 59.266 47.619 0.00 0.00 0.00 3.32
13 14 3.011513 CAATTGTTGCAGAGCGAGC 57.988 52.632 0.00 0.00 0.00 5.03
30 31 0.610174 TGGTGGTTTGCAACAAAGCA 59.390 45.000 18.04 18.04 43.99 3.91
31 32 1.731720 TTGGTGGTTTGCAACAAAGC 58.268 45.000 13.72 13.72 0.00 3.51
32 33 2.095692 GCTTTGGTGGTTTGCAACAAAG 59.904 45.455 24.42 24.42 46.45 2.77
33 34 2.079925 GCTTTGGTGGTTTGCAACAAA 58.920 42.857 0.00 5.30 0.00 2.83
34 35 1.731720 GCTTTGGTGGTTTGCAACAA 58.268 45.000 0.00 0.00 0.00 2.83
35 36 0.459237 CGCTTTGGTGGTTTGCAACA 60.459 50.000 0.00 0.00 0.00 3.33
36 37 0.459411 ACGCTTTGGTGGTTTGCAAC 60.459 50.000 0.00 0.00 0.00 4.17
37 38 0.247736 AACGCTTTGGTGGTTTGCAA 59.752 45.000 0.00 0.00 0.00 4.08
38 39 1.103803 TAACGCTTTGGTGGTTTGCA 58.896 45.000 0.00 0.00 0.00 4.08
39 40 2.432206 ATAACGCTTTGGTGGTTTGC 57.568 45.000 0.00 0.00 0.00 3.68
40 41 5.047188 AGAAAATAACGCTTTGGTGGTTTG 58.953 37.500 0.00 0.00 0.00 2.93
41 42 5.270893 AGAAAATAACGCTTTGGTGGTTT 57.729 34.783 0.00 0.00 0.00 3.27
42 43 4.261867 GGAGAAAATAACGCTTTGGTGGTT 60.262 41.667 0.00 0.00 0.00 3.67
43 44 3.254903 GGAGAAAATAACGCTTTGGTGGT 59.745 43.478 0.00 0.00 0.00 4.16
44 45 3.366985 GGGAGAAAATAACGCTTTGGTGG 60.367 47.826 0.00 0.00 0.00 4.61
45 46 3.254657 TGGGAGAAAATAACGCTTTGGTG 59.745 43.478 0.00 0.00 0.00 4.17
46 47 3.492337 TGGGAGAAAATAACGCTTTGGT 58.508 40.909 0.00 0.00 0.00 3.67
47 48 4.513198 TTGGGAGAAAATAACGCTTTGG 57.487 40.909 0.00 0.00 0.00 3.28
48 49 5.983118 AGTTTTGGGAGAAAATAACGCTTTG 59.017 36.000 0.00 0.00 0.00 2.77
49 50 6.156748 AGTTTTGGGAGAAAATAACGCTTT 57.843 33.333 0.00 0.00 0.00 3.51
50 51 5.784578 AGTTTTGGGAGAAAATAACGCTT 57.215 34.783 0.00 0.00 0.00 4.68
51 52 5.784578 AAGTTTTGGGAGAAAATAACGCT 57.215 34.783 0.00 0.00 0.00 5.07
52 53 6.838198 AAAAGTTTTGGGAGAAAATAACGC 57.162 33.333 0.00 0.00 0.00 4.84
53 54 9.524106 AACTAAAAGTTTTGGGAGAAAATAACG 57.476 29.630 15.20 0.00 34.11 3.18
102 103 3.986572 GTCCTCTCGCAACATCATCTATG 59.013 47.826 0.00 0.00 41.74 2.23
103 104 3.894427 AGTCCTCTCGCAACATCATCTAT 59.106 43.478 0.00 0.00 0.00 1.98
104 105 3.291584 AGTCCTCTCGCAACATCATCTA 58.708 45.455 0.00 0.00 0.00 1.98
105 106 2.106566 AGTCCTCTCGCAACATCATCT 58.893 47.619 0.00 0.00 0.00 2.90
106 107 2.593346 AGTCCTCTCGCAACATCATC 57.407 50.000 0.00 0.00 0.00 2.92
107 108 3.340814 AAAGTCCTCTCGCAACATCAT 57.659 42.857 0.00 0.00 0.00 2.45
108 109 2.807967 CAAAAGTCCTCTCGCAACATCA 59.192 45.455 0.00 0.00 0.00 3.07
109 110 2.413371 GCAAAAGTCCTCTCGCAACATC 60.413 50.000 0.00 0.00 0.00 3.06
110 111 1.537202 GCAAAAGTCCTCTCGCAACAT 59.463 47.619 0.00 0.00 0.00 2.71
111 112 0.944386 GCAAAAGTCCTCTCGCAACA 59.056 50.000 0.00 0.00 0.00 3.33
112 113 0.944386 TGCAAAAGTCCTCTCGCAAC 59.056 50.000 0.00 0.00 0.00 4.17
113 114 1.674359 TTGCAAAAGTCCTCTCGCAA 58.326 45.000 0.00 0.00 37.05 4.85
114 115 1.896220 ATTGCAAAAGTCCTCTCGCA 58.104 45.000 1.71 0.00 0.00 5.10
115 116 3.062774 GTCTATTGCAAAAGTCCTCTCGC 59.937 47.826 1.71 0.00 0.00 5.03
116 117 3.304559 CGTCTATTGCAAAAGTCCTCTCG 59.695 47.826 1.71 0.00 0.00 4.04
117 118 4.092091 CACGTCTATTGCAAAAGTCCTCTC 59.908 45.833 1.71 0.00 0.00 3.20
118 119 3.997021 CACGTCTATTGCAAAAGTCCTCT 59.003 43.478 1.71 0.00 0.00 3.69
119 120 3.125316 CCACGTCTATTGCAAAAGTCCTC 59.875 47.826 1.71 0.00 0.00 3.71
120 121 3.074412 CCACGTCTATTGCAAAAGTCCT 58.926 45.455 1.71 0.00 0.00 3.85
121 122 2.414161 GCCACGTCTATTGCAAAAGTCC 60.414 50.000 1.71 0.00 0.00 3.85
122 123 2.724839 CGCCACGTCTATTGCAAAAGTC 60.725 50.000 1.71 0.00 0.00 3.01
123 124 1.196808 CGCCACGTCTATTGCAAAAGT 59.803 47.619 1.71 0.00 0.00 2.66
124 125 1.196808 ACGCCACGTCTATTGCAAAAG 59.803 47.619 1.71 0.00 33.69 2.27
125 126 1.231221 ACGCCACGTCTATTGCAAAA 58.769 45.000 1.71 0.00 33.69 2.44
126 127 2.921374 ACGCCACGTCTATTGCAAA 58.079 47.368 1.71 0.00 33.69 3.68
127 128 4.685447 ACGCCACGTCTATTGCAA 57.315 50.000 0.00 0.00 33.69 4.08
136 137 2.466140 AAAAACTGCGACGCCACGT 61.466 52.632 18.69 9.02 45.10 4.49
137 138 2.326550 AAAAACTGCGACGCCACG 59.673 55.556 18.69 8.33 0.00 4.94
172 173 3.573967 TCCTGCAATATCGTCTATGCTGA 59.426 43.478 11.84 5.28 39.27 4.26
173 174 3.917988 TCCTGCAATATCGTCTATGCTG 58.082 45.455 0.00 0.00 39.49 4.41
222 226 8.519526 TGATATCAGCTTTTCGGTGTAATTTTT 58.480 29.630 0.00 0.00 41.76 1.94
223 227 8.050778 TGATATCAGCTTTTCGGTGTAATTTT 57.949 30.769 0.00 0.00 41.76 1.82
224 228 7.624360 TGATATCAGCTTTTCGGTGTAATTT 57.376 32.000 0.00 0.00 41.76 1.82
225 229 7.807977 ATGATATCAGCTTTTCGGTGTAATT 57.192 32.000 11.78 0.00 41.76 1.40
226 230 7.807977 AATGATATCAGCTTTTCGGTGTAAT 57.192 32.000 11.78 0.00 41.76 1.89
229 233 5.415701 ACAAATGATATCAGCTTTTCGGTGT 59.584 36.000 11.78 0.38 41.76 4.16
230 234 5.740569 CACAAATGATATCAGCTTTTCGGTG 59.259 40.000 11.78 8.43 42.42 4.94
233 237 5.740569 CACCACAAATGATATCAGCTTTTCG 59.259 40.000 11.78 5.27 0.00 3.46
240 244 6.258507 TCGATTCACACCACAAATGATATCAG 59.741 38.462 11.78 0.15 0.00 2.90
245 249 4.578871 TCTCGATTCACACCACAAATGAT 58.421 39.130 0.00 0.00 0.00 2.45
246 250 4.001618 TCTCGATTCACACCACAAATGA 57.998 40.909 0.00 0.00 0.00 2.57
248 252 5.964958 ATTTCTCGATTCACACCACAAAT 57.035 34.783 0.00 0.00 0.00 2.32
249 253 5.766150 AATTTCTCGATTCACACCACAAA 57.234 34.783 0.00 0.00 0.00 2.83
250 254 5.766150 AAATTTCTCGATTCACACCACAA 57.234 34.783 0.00 0.00 0.00 3.33
251 255 5.766150 AAAATTTCTCGATTCACACCACA 57.234 34.783 0.00 0.00 0.00 4.17
252 256 5.107875 GCAAAAATTTCTCGATTCACACCAC 60.108 40.000 0.00 0.00 0.00 4.16
286 290 0.887933 AATTCCTTCCGCGCAACATT 59.112 45.000 8.75 0.00 0.00 2.71
338 343 3.316029 TCGCTCCTTCCGACGATATTTTA 59.684 43.478 0.00 0.00 0.00 1.52
343 348 0.873054 GATCGCTCCTTCCGACGATA 59.127 55.000 0.00 0.00 44.63 2.92
352 357 0.108424 GCTGTCTGTGATCGCTCCTT 60.108 55.000 7.94 0.00 0.00 3.36
353 358 1.515020 GCTGTCTGTGATCGCTCCT 59.485 57.895 7.94 0.00 0.00 3.69
355 360 0.865218 CTCGCTGTCTGTGATCGCTC 60.865 60.000 7.94 0.00 34.35 5.03
361 366 1.979155 CCCCTCTCGCTGTCTGTGA 60.979 63.158 0.00 0.00 0.00 3.58
362 367 1.943116 CTCCCCTCTCGCTGTCTGTG 61.943 65.000 0.00 0.00 0.00 3.66
365 370 2.043450 CCTCCCCTCTCGCTGTCT 60.043 66.667 0.00 0.00 0.00 3.41
402 414 2.352422 GTGCTCCAGCCACCATCA 59.648 61.111 0.00 0.00 41.18 3.07
425 437 2.109517 CTCCATATGCCTGCTCGCCT 62.110 60.000 0.00 0.00 0.00 5.52
435 447 4.077822 CTCCTTTTCCCATCTCCATATGC 58.922 47.826 0.00 0.00 0.00 3.14
440 452 2.200081 CTCCTCCTTTTCCCATCTCCA 58.800 52.381 0.00 0.00 0.00 3.86
446 458 1.705186 CTCCAACTCCTCCTTTTCCCA 59.295 52.381 0.00 0.00 0.00 4.37
450 462 2.991580 TCCTCTCCAACTCCTCCTTTT 58.008 47.619 0.00 0.00 0.00 2.27
453 465 1.719378 TCTTCCTCTCCAACTCCTCCT 59.281 52.381 0.00 0.00 0.00 3.69
454 466 2.107366 CTCTTCCTCTCCAACTCCTCC 58.893 57.143 0.00 0.00 0.00 4.30
455 467 2.107366 CCTCTTCCTCTCCAACTCCTC 58.893 57.143 0.00 0.00 0.00 3.71
495 510 0.034767 TGATCGTAGGAGGACACCGT 60.035 55.000 0.00 0.00 34.73 4.83
543 558 2.161808 CCAGTCGTCCTACACACTACTG 59.838 54.545 0.00 0.00 32.99 2.74
553 568 2.978824 GGCAAGCCAGTCGTCCTA 59.021 61.111 6.14 0.00 35.81 2.94
598 613 1.075425 CTTTCTCTCAGCCGTGCTCG 61.075 60.000 0.14 0.14 36.40 5.03
614 629 6.716934 TCCTTATCTACTCTTCGCATCTTT 57.283 37.500 0.00 0.00 0.00 2.52
619 634 6.207025 GTCCTTATCCTTATCTACTCTTCGCA 59.793 42.308 0.00 0.00 0.00 5.10
620 635 6.207025 TGTCCTTATCCTTATCTACTCTTCGC 59.793 42.308 0.00 0.00 0.00 4.70
650 665 2.172679 TGGACCGAGCAACATACTACA 58.827 47.619 0.00 0.00 0.00 2.74
698 740 3.412386 AGGAAAAGATTTCCGTCACTGG 58.588 45.455 14.39 0.00 43.23 4.00
740 786 7.255242 GCAGTGATGTTGCCATACTTATATGTT 60.255 37.037 0.00 0.00 37.12 2.71
794 840 4.829968 CCACATCAAATTATTTGGCCACA 58.170 39.130 16.42 0.00 40.98 4.17
831 877 4.789629 CGTATACACAACTCGATCGACAAA 59.210 41.667 15.15 0.00 0.00 2.83
836 882 2.041966 GGCGTATACACAACTCGATCG 58.958 52.381 9.36 9.36 0.00 3.69
837 883 2.041966 CGGCGTATACACAACTCGATC 58.958 52.381 0.00 0.00 0.00 3.69
838 884 1.402968 ACGGCGTATACACAACTCGAT 59.597 47.619 12.58 0.00 0.00 3.59
839 885 0.804364 ACGGCGTATACACAACTCGA 59.196 50.000 12.58 0.00 0.00 4.04
840 886 0.911856 CACGGCGTATACACAACTCG 59.088 55.000 14.22 0.00 0.00 4.18
862 909 0.173029 CAACTTGTGTTGTGGCTGCA 59.827 50.000 0.50 0.00 46.08 4.41
871 918 1.812708 GCTCCCGGTACAACTTGTGTT 60.813 52.381 0.00 0.00 41.98 3.32
955 1002 4.487282 AGGTATGAGCAGGGATAAGGTA 57.513 45.455 0.00 0.00 0.00 3.08
978 1033 0.887387 TACGGCAAACAGTCCAAGCC 60.887 55.000 0.00 0.00 41.86 4.35
1013 1068 1.229951 AGAATGGCTGGGGTGGAGA 60.230 57.895 0.00 0.00 0.00 3.71
1027 1082 2.439156 GCCCTCTTGCGGCAGAAT 60.439 61.111 1.67 0.00 46.27 2.40
1175 1230 4.889856 CCATCGCGCCGACCATCA 62.890 66.667 0.00 0.00 39.18 3.07
1332 1387 2.434359 GGGCCGACGGAGTTGAAG 60.434 66.667 20.50 0.00 47.00 3.02
1513 1568 1.528309 CCAGCGTGTCCTTTGGGTT 60.528 57.895 0.00 0.00 0.00 4.11
1527 1582 2.179517 CTCCACGTCGAGACCAGC 59.820 66.667 3.87 0.00 30.97 4.85
1992 2047 0.721718 CGAAAGCCCTGAACTTAGCG 59.278 55.000 0.00 0.00 0.00 4.26
2006 2061 3.013921 AGCTAGACAGAGAGACCGAAAG 58.986 50.000 0.00 0.00 0.00 2.62
2051 2106 6.603237 TTAGACAAACTGATGCGAATATGG 57.397 37.500 0.00 0.00 0.00 2.74
2054 2109 7.333174 TGTGAATTAGACAAACTGATGCGAATA 59.667 33.333 0.00 0.00 0.00 1.75
2055 2110 6.149308 TGTGAATTAGACAAACTGATGCGAAT 59.851 34.615 0.00 0.00 0.00 3.34
2056 2111 5.468409 TGTGAATTAGACAAACTGATGCGAA 59.532 36.000 0.00 0.00 0.00 4.70
2057 2112 4.994217 TGTGAATTAGACAAACTGATGCGA 59.006 37.500 0.00 0.00 0.00 5.10
2058 2113 5.281693 TGTGAATTAGACAAACTGATGCG 57.718 39.130 0.00 0.00 0.00 4.73
2059 2114 7.081526 AGATGTGAATTAGACAAACTGATGC 57.918 36.000 0.00 0.00 0.00 3.91
2090 2145 9.847224 GGAGGTTAGATATGACATCCTTAAAAA 57.153 33.333 8.53 0.00 42.00 1.94
2091 2146 8.437575 GGGAGGTTAGATATGACATCCTTAAAA 58.562 37.037 14.50 0.00 44.05 1.52
2092 2147 7.570982 TGGGAGGTTAGATATGACATCCTTAAA 59.429 37.037 14.50 0.00 44.05 1.52
2093 2148 7.079700 TGGGAGGTTAGATATGACATCCTTAA 58.920 38.462 14.50 0.43 44.05 1.85
2094 2149 6.630131 TGGGAGGTTAGATATGACATCCTTA 58.370 40.000 14.50 3.33 44.05 2.69
2095 2150 5.476983 TGGGAGGTTAGATATGACATCCTT 58.523 41.667 14.50 0.00 44.05 3.36
2096 2151 5.093236 TGGGAGGTTAGATATGACATCCT 57.907 43.478 14.50 0.00 44.05 3.24
2097 2152 7.496346 TTATGGGAGGTTAGATATGACATCC 57.504 40.000 7.36 7.36 43.91 3.51
2167 2222 9.949174 GCTGATTTTCATTTTGTTTATGGTTTT 57.051 25.926 0.00 0.00 0.00 2.43
2168 2223 9.341078 AGCTGATTTTCATTTTGTTTATGGTTT 57.659 25.926 0.00 0.00 0.00 3.27
2169 2224 8.907222 AGCTGATTTTCATTTTGTTTATGGTT 57.093 26.923 0.00 0.00 0.00 3.67
2170 2225 8.907222 AAGCTGATTTTCATTTTGTTTATGGT 57.093 26.923 0.00 0.00 0.00 3.55
2175 2230 9.768662 ACATCTAAGCTGATTTTCATTTTGTTT 57.231 25.926 0.00 0.00 0.00 2.83
2176 2231 9.199982 CACATCTAAGCTGATTTTCATTTTGTT 57.800 29.630 0.00 0.00 0.00 2.83
2177 2232 8.579006 TCACATCTAAGCTGATTTTCATTTTGT 58.421 29.630 0.00 0.00 0.00 2.83
2178 2233 8.857216 GTCACATCTAAGCTGATTTTCATTTTG 58.143 33.333 0.00 0.00 0.00 2.44
2179 2234 8.579006 TGTCACATCTAAGCTGATTTTCATTTT 58.421 29.630 0.00 0.00 0.00 1.82
2180 2235 8.114331 TGTCACATCTAAGCTGATTTTCATTT 57.886 30.769 0.00 0.00 0.00 2.32
2181 2236 7.692460 TGTCACATCTAAGCTGATTTTCATT 57.308 32.000 0.00 0.00 0.00 2.57
2182 2237 7.876936 ATGTCACATCTAAGCTGATTTTCAT 57.123 32.000 0.00 0.00 0.00 2.57
2183 2238 8.668353 GTTATGTCACATCTAAGCTGATTTTCA 58.332 33.333 0.00 0.00 0.00 2.69
2184 2239 8.887717 AGTTATGTCACATCTAAGCTGATTTTC 58.112 33.333 0.00 0.00 0.00 2.29
2185 2240 8.798859 AGTTATGTCACATCTAAGCTGATTTT 57.201 30.769 0.00 0.00 0.00 1.82
2187 2242 9.486497 CATAGTTATGTCACATCTAAGCTGATT 57.514 33.333 0.00 0.00 0.00 2.57
2188 2243 8.646004 ACATAGTTATGTCACATCTAAGCTGAT 58.354 33.333 0.00 0.00 42.96 2.90
2189 2244 8.011844 ACATAGTTATGTCACATCTAAGCTGA 57.988 34.615 0.00 0.00 42.96 4.26
2216 2271 7.390718 GGGTCTGTTTAGAACACATTTAGATGT 59.609 37.037 0.00 0.00 42.67 3.06
2217 2272 7.607991 AGGGTCTGTTTAGAACACATTTAGATG 59.392 37.037 0.00 0.00 42.67 2.90
2218 2273 7.690256 AGGGTCTGTTTAGAACACATTTAGAT 58.310 34.615 0.00 0.00 42.67 1.98
2219 2274 7.074653 AGGGTCTGTTTAGAACACATTTAGA 57.925 36.000 0.00 0.00 42.67 2.10
2220 2275 9.449719 AATAGGGTCTGTTTAGAACACATTTAG 57.550 33.333 0.00 0.00 42.67 1.85
2221 2276 9.444600 GAATAGGGTCTGTTTAGAACACATTTA 57.555 33.333 0.00 0.00 42.67 1.40
2222 2277 7.119262 CGAATAGGGTCTGTTTAGAACACATTT 59.881 37.037 0.00 0.00 42.67 2.32
2223 2278 6.594159 CGAATAGGGTCTGTTTAGAACACATT 59.406 38.462 0.00 0.00 42.67 2.71
2224 2279 6.106673 CGAATAGGGTCTGTTTAGAACACAT 58.893 40.000 0.00 0.00 42.67 3.21
2225 2280 5.475719 CGAATAGGGTCTGTTTAGAACACA 58.524 41.667 0.00 0.00 42.67 3.72
2226 2281 4.329256 GCGAATAGGGTCTGTTTAGAACAC 59.671 45.833 0.00 0.00 42.67 3.32
2227 2282 4.020928 TGCGAATAGGGTCTGTTTAGAACA 60.021 41.667 0.00 0.00 42.67 3.18
2228 2283 4.501071 TGCGAATAGGGTCTGTTTAGAAC 58.499 43.478 0.00 0.00 40.04 3.01
2229 2284 4.811969 TGCGAATAGGGTCTGTTTAGAA 57.188 40.909 0.00 0.00 34.01 2.10
2230 2285 5.506815 CGTATGCGAATAGGGTCTGTTTAGA 60.507 44.000 0.00 0.00 41.33 2.10
2231 2286 4.680110 CGTATGCGAATAGGGTCTGTTTAG 59.320 45.833 0.00 0.00 41.33 1.85
2232 2287 4.098349 ACGTATGCGAATAGGGTCTGTTTA 59.902 41.667 11.07 0.00 42.00 2.01
2233 2288 3.118884 ACGTATGCGAATAGGGTCTGTTT 60.119 43.478 11.07 0.00 42.00 2.83
2234 2289 2.429610 ACGTATGCGAATAGGGTCTGTT 59.570 45.455 11.07 0.00 42.00 3.16
2235 2290 2.029623 ACGTATGCGAATAGGGTCTGT 58.970 47.619 11.07 0.00 42.00 3.41
2236 2291 2.223735 ACACGTATGCGAATAGGGTCTG 60.224 50.000 11.07 0.00 42.00 3.51
2237 2292 2.029623 ACACGTATGCGAATAGGGTCT 58.970 47.619 11.07 0.00 42.00 3.85
2238 2293 2.124903 CACACGTATGCGAATAGGGTC 58.875 52.381 11.07 0.00 42.00 4.46
2239 2294 1.805120 GCACACGTATGCGAATAGGGT 60.805 52.381 11.07 0.67 42.00 4.34
2240 2295 0.859232 GCACACGTATGCGAATAGGG 59.141 55.000 11.07 0.00 42.00 3.53
2280 2335 0.827507 AAAATGCCGCTCCCTGTTGT 60.828 50.000 0.00 0.00 0.00 3.32
2281 2336 0.318120 AAAAATGCCGCTCCCTGTTG 59.682 50.000 0.00 0.00 0.00 3.33
2282 2337 2.745379 AAAAATGCCGCTCCCTGTT 58.255 47.368 0.00 0.00 0.00 3.16
2283 2338 4.519610 AAAAATGCCGCTCCCTGT 57.480 50.000 0.00 0.00 0.00 4.00
2299 2354 7.524202 GCCGGGGTTAATCTCTTTTTCTAAAAA 60.524 37.037 2.18 1.05 36.53 1.94
2300 2355 6.071784 GCCGGGGTTAATCTCTTTTTCTAAAA 60.072 38.462 2.18 0.00 0.00 1.52
2301 2356 5.416639 GCCGGGGTTAATCTCTTTTTCTAAA 59.583 40.000 2.18 0.00 0.00 1.85
2302 2357 4.945543 GCCGGGGTTAATCTCTTTTTCTAA 59.054 41.667 2.18 0.00 0.00 2.10
2303 2358 4.520179 GCCGGGGTTAATCTCTTTTTCTA 58.480 43.478 2.18 0.00 0.00 2.10
2304 2359 3.353557 GCCGGGGTTAATCTCTTTTTCT 58.646 45.455 2.18 0.00 0.00 2.52
2305 2360 2.426024 GGCCGGGGTTAATCTCTTTTTC 59.574 50.000 2.18 0.00 0.00 2.29
2306 2361 2.042569 AGGCCGGGGTTAATCTCTTTTT 59.957 45.455 2.18 0.00 0.00 1.94
2307 2362 1.639108 AGGCCGGGGTTAATCTCTTTT 59.361 47.619 2.18 0.00 0.00 2.27
2308 2363 1.212195 GAGGCCGGGGTTAATCTCTTT 59.788 52.381 2.18 0.00 0.00 2.52
2309 2364 0.837940 GAGGCCGGGGTTAATCTCTT 59.162 55.000 2.18 0.00 0.00 2.85
2310 2365 0.031010 AGAGGCCGGGGTTAATCTCT 60.031 55.000 2.18 0.00 0.00 3.10
2311 2366 0.106894 CAGAGGCCGGGGTTAATCTC 59.893 60.000 2.18 0.00 0.00 2.75
2312 2367 1.984288 GCAGAGGCCGGGGTTAATCT 61.984 60.000 2.18 0.00 0.00 2.40
2313 2368 1.526225 GCAGAGGCCGGGGTTAATC 60.526 63.158 2.18 0.00 0.00 1.75
2314 2369 1.645402 ATGCAGAGGCCGGGGTTAAT 61.645 55.000 2.18 0.00 40.13 1.40
2315 2370 2.265467 GATGCAGAGGCCGGGGTTAA 62.265 60.000 2.18 0.00 40.13 2.01
2316 2371 2.690881 ATGCAGAGGCCGGGGTTA 60.691 61.111 2.18 0.00 40.13 2.85
2317 2372 4.115199 GATGCAGAGGCCGGGGTT 62.115 66.667 2.18 0.00 40.13 4.11
2320 2375 3.933722 ATCGATGCAGAGGCCGGG 61.934 66.667 2.18 0.00 40.13 5.73
2321 2376 2.664185 CATCGATGCAGAGGCCGG 60.664 66.667 13.37 0.00 40.13 6.13
2331 2386 9.715123 TTAATAAAATAACTGTGTGCATCGATG 57.285 29.630 21.27 21.27 0.00 3.84
2332 2387 9.935682 CTTAATAAAATAACTGTGTGCATCGAT 57.064 29.630 0.00 0.00 0.00 3.59
2333 2388 9.157104 TCTTAATAAAATAACTGTGTGCATCGA 57.843 29.630 0.00 0.00 0.00 3.59
2334 2389 9.767684 TTCTTAATAAAATAACTGTGTGCATCG 57.232 29.630 0.00 0.00 0.00 3.84
2356 2411 9.367160 TGAGGAGATTTTTGAACCTATTTTCTT 57.633 29.630 0.00 0.00 0.00 2.52
2357 2412 8.940397 TGAGGAGATTTTTGAACCTATTTTCT 57.060 30.769 0.00 0.00 0.00 2.52
2358 2413 9.631452 CTTGAGGAGATTTTTGAACCTATTTTC 57.369 33.333 0.00 0.00 0.00 2.29
2359 2414 9.147732 ACTTGAGGAGATTTTTGAACCTATTTT 57.852 29.630 0.00 0.00 0.00 1.82
2360 2415 8.712228 ACTTGAGGAGATTTTTGAACCTATTT 57.288 30.769 0.00 0.00 0.00 1.40
2361 2416 9.454859 CTACTTGAGGAGATTTTTGAACCTATT 57.545 33.333 0.00 0.00 0.00 1.73
2362 2417 8.606830 ACTACTTGAGGAGATTTTTGAACCTAT 58.393 33.333 0.00 0.00 0.00 2.57
2363 2418 7.974504 ACTACTTGAGGAGATTTTTGAACCTA 58.025 34.615 0.00 0.00 0.00 3.08
2364 2419 6.842676 ACTACTTGAGGAGATTTTTGAACCT 58.157 36.000 0.00 0.00 0.00 3.50
2365 2420 6.937465 AGACTACTTGAGGAGATTTTTGAACC 59.063 38.462 0.00 0.00 0.00 3.62
2366 2421 7.657761 TGAGACTACTTGAGGAGATTTTTGAAC 59.342 37.037 0.00 0.00 0.00 3.18
2367 2422 7.735917 TGAGACTACTTGAGGAGATTTTTGAA 58.264 34.615 0.00 0.00 0.00 2.69
2368 2423 7.303182 TGAGACTACTTGAGGAGATTTTTGA 57.697 36.000 0.00 0.00 0.00 2.69
2369 2424 7.969536 TTGAGACTACTTGAGGAGATTTTTG 57.030 36.000 0.00 0.00 0.00 2.44
2370 2425 8.980481 TTTTGAGACTACTTGAGGAGATTTTT 57.020 30.769 0.00 0.00 0.00 1.94
2371 2426 8.432805 TCTTTTGAGACTACTTGAGGAGATTTT 58.567 33.333 0.00 0.00 0.00 1.82
2372 2427 7.967908 TCTTTTGAGACTACTTGAGGAGATTT 58.032 34.615 0.00 0.00 0.00 2.17
2373 2428 7.546250 TCTTTTGAGACTACTTGAGGAGATT 57.454 36.000 0.00 0.00 0.00 2.40
2374 2429 7.398618 TGATCTTTTGAGACTACTTGAGGAGAT 59.601 37.037 0.00 0.00 0.00 2.75
2375 2430 6.721668 TGATCTTTTGAGACTACTTGAGGAGA 59.278 38.462 0.00 0.00 0.00 3.71
2376 2431 6.929625 TGATCTTTTGAGACTACTTGAGGAG 58.070 40.000 0.00 0.00 0.00 3.69
2377 2432 6.918067 TGATCTTTTGAGACTACTTGAGGA 57.082 37.500 0.00 0.00 0.00 3.71
2378 2433 7.326454 TCATGATCTTTTGAGACTACTTGAGG 58.674 38.462 0.00 0.00 0.00 3.86
2379 2434 8.768957 TTCATGATCTTTTGAGACTACTTGAG 57.231 34.615 0.00 0.00 0.00 3.02
2380 2435 8.588472 TCTTCATGATCTTTTGAGACTACTTGA 58.412 33.333 0.00 0.00 0.00 3.02
2381 2436 8.768957 TCTTCATGATCTTTTGAGACTACTTG 57.231 34.615 0.00 0.00 0.00 3.16
2382 2437 9.434420 CTTCTTCATGATCTTTTGAGACTACTT 57.566 33.333 0.00 0.00 0.00 2.24
2383 2438 7.548780 GCTTCTTCATGATCTTTTGAGACTACT 59.451 37.037 0.00 0.00 0.00 2.57
2384 2439 7.332926 TGCTTCTTCATGATCTTTTGAGACTAC 59.667 37.037 0.00 0.00 0.00 2.73
2385 2440 7.389232 TGCTTCTTCATGATCTTTTGAGACTA 58.611 34.615 0.00 0.00 0.00 2.59
2386 2441 6.236409 TGCTTCTTCATGATCTTTTGAGACT 58.764 36.000 0.00 0.00 0.00 3.24
2387 2442 6.492007 TGCTTCTTCATGATCTTTTGAGAC 57.508 37.500 0.00 0.00 0.00 3.36
2388 2443 7.514784 TTTGCTTCTTCATGATCTTTTGAGA 57.485 32.000 0.00 0.00 0.00 3.27
2389 2444 7.201444 GCATTTGCTTCTTCATGATCTTTTGAG 60.201 37.037 0.00 0.00 38.21 3.02
2390 2445 6.588756 GCATTTGCTTCTTCATGATCTTTTGA 59.411 34.615 0.00 0.00 38.21 2.69
2391 2446 6.183360 GGCATTTGCTTCTTCATGATCTTTTG 60.183 38.462 0.00 0.00 41.70 2.44
2392 2447 5.873164 GGCATTTGCTTCTTCATGATCTTTT 59.127 36.000 0.00 0.00 41.70 2.27
2393 2448 5.046878 TGGCATTTGCTTCTTCATGATCTTT 60.047 36.000 0.00 0.00 41.70 2.52
2394 2449 4.464951 TGGCATTTGCTTCTTCATGATCTT 59.535 37.500 0.00 0.00 41.70 2.40
2395 2450 4.021229 TGGCATTTGCTTCTTCATGATCT 58.979 39.130 0.00 0.00 41.70 2.75
2396 2451 4.110482 GTGGCATTTGCTTCTTCATGATC 58.890 43.478 0.00 0.00 41.70 2.92
2397 2452 3.512329 TGTGGCATTTGCTTCTTCATGAT 59.488 39.130 0.00 0.00 41.70 2.45
2398 2453 2.892215 TGTGGCATTTGCTTCTTCATGA 59.108 40.909 2.12 0.00 41.70 3.07
2399 2454 2.991190 GTGTGGCATTTGCTTCTTCATG 59.009 45.455 2.12 0.00 41.70 3.07
2400 2455 2.352030 CGTGTGGCATTTGCTTCTTCAT 60.352 45.455 2.12 0.00 41.70 2.57
2401 2456 1.001487 CGTGTGGCATTTGCTTCTTCA 60.001 47.619 2.12 0.00 41.70 3.02
2402 2457 1.689959 CGTGTGGCATTTGCTTCTTC 58.310 50.000 2.12 0.00 41.70 2.87
2403 2458 0.318955 GCGTGTGGCATTTGCTTCTT 60.319 50.000 2.12 0.00 42.87 2.52
2404 2459 1.286880 GCGTGTGGCATTTGCTTCT 59.713 52.632 2.12 0.00 42.87 2.85
2405 2460 2.082366 CGCGTGTGGCATTTGCTTC 61.082 57.895 0.00 0.00 43.84 3.86
2406 2461 2.050168 CGCGTGTGGCATTTGCTT 60.050 55.556 0.00 0.00 43.84 3.91
2407 2462 4.041917 CCGCGTGTGGCATTTGCT 62.042 61.111 4.92 0.00 43.84 3.91
2415 2470 0.172352 ATATTTTTGGCCGCGTGTGG 59.828 50.000 4.92 0.00 0.00 4.17
2416 2471 2.834574 TATATTTTTGGCCGCGTGTG 57.165 45.000 4.92 0.00 0.00 3.82
2417 2472 3.851976 TTTATATTTTTGGCCGCGTGT 57.148 38.095 4.92 0.00 0.00 4.49
2418 2473 5.062809 ACATTTTTATATTTTTGGCCGCGTG 59.937 36.000 4.92 0.00 0.00 5.34
2419 2474 5.172205 ACATTTTTATATTTTTGGCCGCGT 58.828 33.333 4.92 0.00 0.00 6.01
2420 2475 5.289675 TGACATTTTTATATTTTTGGCCGCG 59.710 36.000 0.00 0.00 0.00 6.46
2421 2476 6.091441 TGTGACATTTTTATATTTTTGGCCGC 59.909 34.615 0.00 0.00 0.00 6.53
2422 2477 7.588143 TGTGACATTTTTATATTTTTGGCCG 57.412 32.000 0.00 0.00 0.00 6.13
2423 2478 8.233868 GGTTGTGACATTTTTATATTTTTGGCC 58.766 33.333 0.00 0.00 0.00 5.36
2424 2479 7.954786 CGGTTGTGACATTTTTATATTTTTGGC 59.045 33.333 0.00 0.00 0.00 4.52
2425 2480 8.439286 CCGGTTGTGACATTTTTATATTTTTGG 58.561 33.333 0.00 0.00 0.00 3.28
2426 2481 7.954786 GCCGGTTGTGACATTTTTATATTTTTG 59.045 33.333 1.90 0.00 0.00 2.44
2427 2482 7.875554 AGCCGGTTGTGACATTTTTATATTTTT 59.124 29.630 1.90 0.00 0.00 1.94
2428 2483 7.382898 AGCCGGTTGTGACATTTTTATATTTT 58.617 30.769 1.90 0.00 0.00 1.82
2429 2484 6.930731 AGCCGGTTGTGACATTTTTATATTT 58.069 32.000 1.90 0.00 0.00 1.40
2430 2485 6.524101 AGCCGGTTGTGACATTTTTATATT 57.476 33.333 1.90 0.00 0.00 1.28
2431 2486 7.817418 ATAGCCGGTTGTGACATTTTTATAT 57.183 32.000 1.90 0.00 0.00 0.86
2432 2487 8.734218 TTATAGCCGGTTGTGACATTTTTATA 57.266 30.769 1.90 0.00 0.00 0.98
2433 2488 7.633193 TTATAGCCGGTTGTGACATTTTTAT 57.367 32.000 1.90 0.00 0.00 1.40
2434 2489 7.633193 ATTATAGCCGGTTGTGACATTTTTA 57.367 32.000 1.90 0.00 0.00 1.52
2435 2490 5.968528 TTATAGCCGGTTGTGACATTTTT 57.031 34.783 1.90 0.00 0.00 1.94
2436 2491 7.633193 TTATTATAGCCGGTTGTGACATTTT 57.367 32.000 1.90 0.00 0.00 1.82
2437 2492 7.633193 TTTATTATAGCCGGTTGTGACATTT 57.367 32.000 1.90 0.00 0.00 2.32
2438 2493 7.817418 ATTTATTATAGCCGGTTGTGACATT 57.183 32.000 1.90 0.00 0.00 2.71
2439 2494 7.817418 AATTTATTATAGCCGGTTGTGACAT 57.183 32.000 1.90 0.00 0.00 3.06
2440 2495 8.734218 TTAATTTATTATAGCCGGTTGTGACA 57.266 30.769 1.90 0.00 0.00 3.58
2441 2496 9.048446 TCTTAATTTATTATAGCCGGTTGTGAC 57.952 33.333 1.90 0.00 0.00 3.67
2442 2497 9.787435 ATCTTAATTTATTATAGCCGGTTGTGA 57.213 29.630 1.90 0.00 0.00 3.58
2471 2526 9.060347 CGGTTCAGTAATAGACTAGGTGTATAA 57.940 37.037 0.00 0.00 35.64 0.98
2472 2527 8.213679 ACGGTTCAGTAATAGACTAGGTGTATA 58.786 37.037 0.00 0.00 35.64 1.47
2473 2528 7.059156 ACGGTTCAGTAATAGACTAGGTGTAT 58.941 38.462 0.00 0.00 35.64 2.29
2474 2529 6.418101 ACGGTTCAGTAATAGACTAGGTGTA 58.582 40.000 0.00 0.00 35.64 2.90
2475 2530 5.259632 ACGGTTCAGTAATAGACTAGGTGT 58.740 41.667 0.00 0.00 35.64 4.16
2476 2531 5.356190 TGACGGTTCAGTAATAGACTAGGTG 59.644 44.000 0.00 0.00 35.64 4.00
2477 2532 5.503927 TGACGGTTCAGTAATAGACTAGGT 58.496 41.667 0.00 0.00 35.64 3.08
2478 2533 6.487331 AGATGACGGTTCAGTAATAGACTAGG 59.513 42.308 0.00 0.00 35.64 3.02
2479 2534 7.499321 AGATGACGGTTCAGTAATAGACTAG 57.501 40.000 0.00 0.00 35.64 2.57
2481 2536 9.742144 ATATAGATGACGGTTCAGTAATAGACT 57.258 33.333 0.00 0.00 39.82 3.24
2482 2537 9.991388 GATATAGATGACGGTTCAGTAATAGAC 57.009 37.037 0.00 0.00 34.35 2.59
2483 2538 9.734984 TGATATAGATGACGGTTCAGTAATAGA 57.265 33.333 0.00 0.00 34.35 1.98
2484 2539 9.995957 CTGATATAGATGACGGTTCAGTAATAG 57.004 37.037 0.00 0.00 34.35 1.73
2485 2540 9.516546 ACTGATATAGATGACGGTTCAGTAATA 57.483 33.333 6.16 0.00 40.21 0.98
2486 2541 8.410673 ACTGATATAGATGACGGTTCAGTAAT 57.589 34.615 6.16 0.00 40.21 1.89
2487 2542 7.818997 ACTGATATAGATGACGGTTCAGTAA 57.181 36.000 6.16 0.00 40.21 2.24
2488 2543 7.284716 ACAACTGATATAGATGACGGTTCAGTA 59.715 37.037 7.92 0.00 40.89 2.74
2489 2544 6.096987 ACAACTGATATAGATGACGGTTCAGT 59.903 38.462 2.83 2.83 42.90 3.41
2490 2545 6.507900 ACAACTGATATAGATGACGGTTCAG 58.492 40.000 0.00 0.00 34.35 3.02
2491 2546 6.465439 ACAACTGATATAGATGACGGTTCA 57.535 37.500 0.00 0.00 33.72 3.18
2507 2562 9.511144 CTTGTTACACGTGATATATACAACTGA 57.489 33.333 25.01 1.52 0.00 3.41
2508 2563 8.752254 CCTTGTTACACGTGATATATACAACTG 58.248 37.037 25.01 10.59 0.00 3.16
2509 2564 7.924412 CCCTTGTTACACGTGATATATACAACT 59.076 37.037 25.01 0.00 0.00 3.16
2510 2565 7.922278 TCCCTTGTTACACGTGATATATACAAC 59.078 37.037 25.01 11.98 0.00 3.32
2511 2566 8.009622 TCCCTTGTTACACGTGATATATACAA 57.990 34.615 25.01 18.42 0.00 2.41
2512 2567 7.585579 TCCCTTGTTACACGTGATATATACA 57.414 36.000 25.01 12.80 0.00 2.29
2513 2568 6.585322 GCTCCCTTGTTACACGTGATATATAC 59.415 42.308 25.01 10.45 0.00 1.47
2514 2569 6.265876 TGCTCCCTTGTTACACGTGATATATA 59.734 38.462 25.01 0.00 0.00 0.86
2515 2570 5.069914 TGCTCCCTTGTTACACGTGATATAT 59.930 40.000 25.01 0.85 0.00 0.86
2516 2571 4.403113 TGCTCCCTTGTTACACGTGATATA 59.597 41.667 25.01 0.55 0.00 0.86
2517 2572 3.196901 TGCTCCCTTGTTACACGTGATAT 59.803 43.478 25.01 1.74 0.00 1.63
2518 2573 2.563620 TGCTCCCTTGTTACACGTGATA 59.436 45.455 25.01 8.17 0.00 2.15
2519 2574 1.346395 TGCTCCCTTGTTACACGTGAT 59.654 47.619 25.01 9.25 0.00 3.06
2520 2575 0.753867 TGCTCCCTTGTTACACGTGA 59.246 50.000 25.01 2.68 0.00 4.35
2521 2576 1.148310 CTGCTCCCTTGTTACACGTG 58.852 55.000 15.48 15.48 0.00 4.49
2522 2577 0.602905 GCTGCTCCCTTGTTACACGT 60.603 55.000 0.00 0.00 0.00 4.49
2523 2578 0.602638 TGCTGCTCCCTTGTTACACG 60.603 55.000 0.00 0.00 0.00 4.49
2524 2579 1.826385 ATGCTGCTCCCTTGTTACAC 58.174 50.000 0.00 0.00 0.00 2.90
2525 2580 3.931907 ATATGCTGCTCCCTTGTTACA 57.068 42.857 0.00 0.00 0.00 2.41
2526 2581 3.947834 ACAATATGCTGCTCCCTTGTTAC 59.052 43.478 0.00 0.00 0.00 2.50
2527 2582 3.947196 CACAATATGCTGCTCCCTTGTTA 59.053 43.478 0.00 0.00 0.00 2.41
2528 2583 2.756760 CACAATATGCTGCTCCCTTGTT 59.243 45.455 0.00 0.00 0.00 2.83
2529 2584 2.291153 ACACAATATGCTGCTCCCTTGT 60.291 45.455 0.00 3.19 0.00 3.16
2530 2585 2.372264 ACACAATATGCTGCTCCCTTG 58.628 47.619 0.00 2.57 0.00 3.61
2531 2586 2.756760 CAACACAATATGCTGCTCCCTT 59.243 45.455 0.00 0.00 0.00 3.95
2532 2587 2.025981 TCAACACAATATGCTGCTCCCT 60.026 45.455 0.00 0.00 0.00 4.20
2533 2588 2.368439 TCAACACAATATGCTGCTCCC 58.632 47.619 0.00 0.00 0.00 4.30
2539 2594 9.037737 GCAATTTCAATATCAACACAATATGCT 57.962 29.630 0.00 0.00 0.00 3.79
2565 2620 0.523966 TAATTCCAAACTTGCGGGCG 59.476 50.000 0.00 0.00 0.00 6.13
2632 2701 3.841845 TCTTCCGGAGTTCTAAAATGGGA 59.158 43.478 3.34 0.00 0.00 4.37
2658 2727 9.732130 GAGGGAAATGTATAAGCATCTCTATTT 57.268 33.333 0.00 0.00 0.00 1.40
2659 2728 8.325046 GGAGGGAAATGTATAAGCATCTCTATT 58.675 37.037 0.00 0.00 0.00 1.73
2660 2729 7.459125 TGGAGGGAAATGTATAAGCATCTCTAT 59.541 37.037 0.00 0.00 0.00 1.98
2661 2730 6.787458 TGGAGGGAAATGTATAAGCATCTCTA 59.213 38.462 0.00 0.00 0.00 2.43
2662 2731 5.608437 TGGAGGGAAATGTATAAGCATCTCT 59.392 40.000 0.00 0.00 0.00 3.10
2663 2732 5.869579 TGGAGGGAAATGTATAAGCATCTC 58.130 41.667 0.00 0.00 0.00 2.75
2664 2733 5.912149 TGGAGGGAAATGTATAAGCATCT 57.088 39.130 0.00 0.00 0.00 2.90
2665 2734 6.959639 TTTGGAGGGAAATGTATAAGCATC 57.040 37.500 0.00 0.00 0.00 3.91
2666 2735 7.732222 TTTTTGGAGGGAAATGTATAAGCAT 57.268 32.000 0.00 0.00 0.00 3.79
2691 2760 7.059156 AGGCTGAAAATGTATAAGCATCTCTT 58.941 34.615 0.00 0.00 38.79 2.85
2724 2793 6.868622 AGGTTGCTATTAGAGTTGAGTGTAG 58.131 40.000 0.00 0.00 0.00 2.74
2738 2807 5.372373 GGCTAGAAGATGAAGGTTGCTATT 58.628 41.667 0.00 0.00 0.00 1.73
2759 2828 2.543037 TAGGGAAGAAAAATGGGGGC 57.457 50.000 0.00 0.00 0.00 5.80
2774 2843 1.622811 CTGCTAGGGATGCTCTTAGGG 59.377 57.143 0.00 0.00 0.00 3.53
2813 2882 3.709987 ACCGTCGGAATTATAAGGAACG 58.290 45.455 20.51 0.00 0.00 3.95
2814 2883 6.426980 AAAACCGTCGGAATTATAAGGAAC 57.573 37.500 20.51 0.00 0.00 3.62
2815 2884 8.558973 TTTAAAACCGTCGGAATTATAAGGAA 57.441 30.769 20.51 4.85 0.00 3.36
2816 2885 7.823799 ACTTTAAAACCGTCGGAATTATAAGGA 59.176 33.333 20.51 0.00 0.00 3.36
2857 2926 0.988832 TACGGGATTTGTTCAGGCCT 59.011 50.000 0.00 0.00 0.00 5.19
2861 2930 4.625311 GCCATTTTTACGGGATTTGTTCAG 59.375 41.667 0.00 0.00 0.00 3.02
2887 2956 5.564063 GCCGCCTACATAATTTTTATGGGTC 60.564 44.000 10.94 1.94 0.00 4.46
2888 2957 4.279922 GCCGCCTACATAATTTTTATGGGT 59.720 41.667 10.94 0.00 0.00 4.51
2892 2961 3.504520 CGGGCCGCCTACATAATTTTTAT 59.495 43.478 15.42 0.00 0.00 1.40
2914 2983 4.440829 TGGCGGAGGGGGATTTGC 62.441 66.667 0.00 0.00 0.00 3.68
2935 3005 1.563924 AACGCCCTGACCTGTACATA 58.436 50.000 0.00 0.00 0.00 2.29
2941 3011 0.676782 CCCTAAAACGCCCTGACCTG 60.677 60.000 0.00 0.00 0.00 4.00
2942 3012 1.131928 ACCCTAAAACGCCCTGACCT 61.132 55.000 0.00 0.00 0.00 3.85
2971 3042 2.446802 AGGGGGCGGAGAAGATCC 60.447 66.667 0.00 0.00 45.64 3.36
2975 3046 3.474570 CTGGAGGGGGCGGAGAAG 61.475 72.222 0.00 0.00 0.00 2.85
2982 3053 4.475135 GAAGACGCTGGAGGGGGC 62.475 72.222 0.00 0.00 35.97 5.80
2994 3065 3.443976 GCTCATCGGAGAGAAAGAAGAC 58.556 50.000 8.87 0.00 44.26 3.01
2998 3069 1.751437 TCGCTCATCGGAGAGAAAGA 58.249 50.000 8.87 2.89 45.31 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.