Multiple sequence alignment - TraesCS2A01G374800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G374800 chr2A 100.000 4584 0 0 1 4584 617644849 617649432 0.000000e+00 8466.0
1 TraesCS2A01G374800 chr2A 93.686 776 38 4 1283 2055 595476440 595477207 0.000000e+00 1151.0
2 TraesCS2A01G374800 chr2A 84.286 420 62 4 4164 4580 753593277 753593695 1.540000e-109 407.0
3 TraesCS2A01G374800 chr2D 92.231 4029 181 64 1 3926 475088843 475092842 0.000000e+00 5585.0
4 TraesCS2A01G374800 chr2D 85.821 268 34 4 4161 4424 146236978 146237245 9.710000e-72 281.0
5 TraesCS2A01G374800 chr2B 95.492 2285 80 7 1884 4154 556199661 556201936 0.000000e+00 3627.0
6 TraesCS2A01G374800 chr2B 92.181 1637 72 22 263 1858 556197716 556199337 0.000000e+00 2263.0
7 TraesCS2A01G374800 chr2B 94.811 424 20 2 4162 4584 781812128 781811706 0.000000e+00 660.0
8 TraesCS2A01G374800 chr2B 94.561 239 10 3 1 238 556197483 556197719 2.610000e-97 366.0
9 TraesCS2A01G374800 chr1B 94.354 797 39 5 1282 2075 85713216 85712423 0.000000e+00 1218.0
10 TraesCS2A01G374800 chr1B 94.354 797 40 4 1282 2075 124074214 124073420 0.000000e+00 1218.0
11 TraesCS2A01G374800 chr4A 94.228 797 41 4 1282 2075 738693187 738693981 0.000000e+00 1212.0
12 TraesCS2A01G374800 chr4A 93.462 780 43 3 1283 2055 493269717 493268939 0.000000e+00 1151.0
13 TraesCS2A01G374800 chr4B 93.867 799 42 4 1282 2075 564752350 564751554 0.000000e+00 1197.0
14 TraesCS2A01G374800 chr7A 93.814 776 43 3 1283 2055 289953154 289953927 0.000000e+00 1162.0
15 TraesCS2A01G374800 chr5A 93.677 775 44 3 1283 2054 671854615 671855387 0.000000e+00 1155.0
16 TraesCS2A01G374800 chr5A 85.995 407 56 1 4175 4580 570251955 570252361 7.040000e-118 435.0
17 TraesCS2A01G374800 chr3B 92.671 423 28 2 4163 4584 10663137 10662717 1.410000e-169 606.0
18 TraesCS2A01G374800 chr3B 89.151 424 43 3 4163 4584 598912901 598912479 4.060000e-145 525.0
19 TraesCS2A01G374800 chr3B 84.123 422 64 3 4163 4583 556892691 556892272 5.520000e-109 405.0
20 TraesCS2A01G374800 chr5D 84.892 417 62 1 4163 4578 111622541 111622957 1.970000e-113 420.0
21 TraesCS2A01G374800 chr3D 83.402 241 38 2 4161 4400 439828833 439829072 5.970000e-54 222.0
22 TraesCS2A01G374800 chr4D 100.000 29 0 0 4480 4508 88469900 88469872 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G374800 chr2A 617644849 617649432 4583 False 8466.000000 8466 100.000 1 4584 1 chr2A.!!$F2 4583
1 TraesCS2A01G374800 chr2A 595476440 595477207 767 False 1151.000000 1151 93.686 1283 2055 1 chr2A.!!$F1 772
2 TraesCS2A01G374800 chr2D 475088843 475092842 3999 False 5585.000000 5585 92.231 1 3926 1 chr2D.!!$F2 3925
3 TraesCS2A01G374800 chr2B 556197483 556201936 4453 False 2085.333333 3627 94.078 1 4154 3 chr2B.!!$F1 4153
4 TraesCS2A01G374800 chr1B 85712423 85713216 793 True 1218.000000 1218 94.354 1282 2075 1 chr1B.!!$R1 793
5 TraesCS2A01G374800 chr1B 124073420 124074214 794 True 1218.000000 1218 94.354 1282 2075 1 chr1B.!!$R2 793
6 TraesCS2A01G374800 chr4A 738693187 738693981 794 False 1212.000000 1212 94.228 1282 2075 1 chr4A.!!$F1 793
7 TraesCS2A01G374800 chr4A 493268939 493269717 778 True 1151.000000 1151 93.462 1283 2055 1 chr4A.!!$R1 772
8 TraesCS2A01G374800 chr4B 564751554 564752350 796 True 1197.000000 1197 93.867 1282 2075 1 chr4B.!!$R1 793
9 TraesCS2A01G374800 chr7A 289953154 289953927 773 False 1162.000000 1162 93.814 1283 2055 1 chr7A.!!$F1 772
10 TraesCS2A01G374800 chr5A 671854615 671855387 772 False 1155.000000 1155 93.677 1283 2054 1 chr5A.!!$F2 771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
865 906 0.798776 CCAAGATTCGTGTGCAGGTC 59.201 55.000 0.00 0.0 0.00 3.85 F
1250 1316 0.692419 AGCAGAAGATGGGGATCCGT 60.692 55.000 5.45 0.0 35.24 4.69 F
2601 3006 1.740043 GCAATGTTGGCTGGCATAACC 60.740 52.381 4.22 0.0 39.84 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2784 3189 4.263331 GGGGAAAGATTGGACAACAGACTA 60.263 45.833 0.00 0.00 0.00 2.59 R
3478 3883 3.689161 TGCCACGAAATAGAACATTCCTG 59.311 43.478 0.00 0.00 0.00 3.86 R
4495 4929 0.032952 TACAGTCGAAGCTTTGGCGT 59.967 50.000 12.62 14.83 44.37 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 49 3.543494 CCATACAAATTTGAAAGAGCGCG 59.457 43.478 24.64 0.00 0.00 6.86
127 130 4.363138 GTTTTGGCAAGATATTAGCAGGC 58.637 43.478 0.00 0.00 0.00 4.85
171 177 2.365617 ACAGGGGTATCATCAACTAGCG 59.634 50.000 0.00 0.00 0.00 4.26
208 214 5.395324 GGCACTAGCATTAAAGACTACCTCA 60.395 44.000 0.00 0.00 44.61 3.86
234 240 2.198406 GGCATGAACGCGTAGATGTTA 58.802 47.619 23.70 3.90 0.00 2.41
241 247 5.513376 TGAACGCGTAGATGTTATACGATT 58.487 37.500 14.46 0.00 46.89 3.34
243 249 5.801176 ACGCGTAGATGTTATACGATTTG 57.199 39.130 11.67 0.00 46.89 2.32
244 250 5.276270 ACGCGTAGATGTTATACGATTTGT 58.724 37.500 11.67 0.00 46.89 2.83
245 251 6.429624 ACGCGTAGATGTTATACGATTTGTA 58.570 36.000 11.67 0.00 46.89 2.41
248 254 7.112565 CGCGTAGATGTTATACGATTTGTAAGT 59.887 37.037 9.48 0.00 46.89 2.24
255 261 8.780846 TGTTATACGATTTGTAAGTTCACCAT 57.219 30.769 0.00 0.00 36.44 3.55
256 262 8.875803 TGTTATACGATTTGTAAGTTCACCATC 58.124 33.333 0.00 0.00 36.44 3.51
257 263 9.095065 GTTATACGATTTGTAAGTTCACCATCT 57.905 33.333 0.00 0.00 36.44 2.90
260 266 6.698380 ACGATTTGTAAGTTCACCATCTACT 58.302 36.000 0.00 0.00 0.00 2.57
335 353 3.505464 ATCTCGTCCACCTAAAACTCG 57.495 47.619 0.00 0.00 0.00 4.18
399 438 4.096003 CCCAGCAACCCGACGGAT 62.096 66.667 17.49 0.00 0.00 4.18
421 460 1.364171 CTATAGGCTGCCGCGACTT 59.636 57.895 13.96 0.00 36.88 3.01
482 521 6.001460 TGGAAAAACGAGAATAAGTGGACAT 58.999 36.000 0.00 0.00 0.00 3.06
865 906 0.798776 CCAAGATTCGTGTGCAGGTC 59.201 55.000 0.00 0.00 0.00 3.85
930 973 1.924335 CGTTCCAGTGTGTGTGTCG 59.076 57.895 0.00 0.00 0.00 4.35
1250 1316 0.692419 AGCAGAAGATGGGGATCCGT 60.692 55.000 5.45 0.00 35.24 4.69
1526 1595 9.314133 AGCTATTAGTAACAGTCCATCATGATA 57.686 33.333 8.15 0.00 0.00 2.15
1820 1892 3.809279 CGTGCCTGCTTCATGTTATCATA 59.191 43.478 0.00 0.00 32.47 2.15
1831 1903 7.443575 GCTTCATGTTATCATACCTGATTGACT 59.556 37.037 0.00 0.00 42.23 3.41
1964 2355 7.223260 ACATATTTCTGATGCCCATATGTTG 57.777 36.000 1.24 0.00 37.65 3.33
2033 2424 1.818674 GGTCTTTACAGTGGCATTGGG 59.181 52.381 14.80 2.20 0.00 4.12
2103 2494 4.943705 CCTATGAGCTTTTAACAGCCTTCA 59.056 41.667 9.97 8.70 41.12 3.02
2151 2542 6.299604 CGACACAATTCTTTGCTTAGTGTAG 58.700 40.000 0.00 0.00 38.68 2.74
2257 2648 2.377869 CTGGCATATCCTCCCATTTCCT 59.622 50.000 0.00 0.00 35.26 3.36
2263 2654 6.126361 GGCATATCCTCCCATTTCCTATATGT 60.126 42.308 0.00 0.00 31.53 2.29
2295 2686 7.933396 TGTTATCATACTCCAATTGCAGATTG 58.067 34.615 2.64 12.10 0.00 2.67
2302 2693 4.344679 ACTCCAATTGCAGATTGACCAAAA 59.655 37.500 17.70 0.00 0.00 2.44
2311 2702 4.037923 GCAGATTGACCAAAAGTCCTTTGA 59.962 41.667 0.00 0.00 46.35 2.69
2601 3006 1.740043 GCAATGTTGGCTGGCATAACC 60.740 52.381 4.22 0.00 39.84 2.85
2784 3189 5.939764 TGAGAGTATGGAATAGCAGTGTT 57.060 39.130 0.00 0.00 0.00 3.32
3384 3789 5.903764 TGCACATTATTTGTTCTTGCAAC 57.096 34.783 0.00 0.00 36.00 4.17
3478 3883 0.946221 CAGGAACGTCACCTGCTGAC 60.946 60.000 22.48 0.00 46.30 3.51
3517 3922 1.152984 CATTGGGCTACGGATGGCA 60.153 57.895 0.00 0.00 32.95 4.92
3565 3970 4.395959 TGTTGGGTCCTACTATTTAGCG 57.604 45.455 3.54 0.00 0.00 4.26
3588 3993 4.830046 GGTAGATCAGCTCTTGTAGATGGA 59.170 45.833 0.00 0.00 42.11 3.41
3590 3995 5.275067 AGATCAGCTCTTGTAGATGGAAC 57.725 43.478 0.00 0.00 42.11 3.62
3695 4107 4.874966 CCTTGTTCATCTCATCCAGACTTC 59.125 45.833 0.00 0.00 32.26 3.01
3696 4108 4.115401 TGTTCATCTCATCCAGACTTCG 57.885 45.455 0.00 0.00 32.26 3.79
3772 4184 2.554032 CAAACAGAATTGAAGGTCCGCT 59.446 45.455 0.00 0.00 31.84 5.52
3773 4185 3.695830 AACAGAATTGAAGGTCCGCTA 57.304 42.857 0.00 0.00 0.00 4.26
3844 4257 6.603599 GGAAAATGTTAGTGGCTAAGGAGAAT 59.396 38.462 0.00 0.00 0.00 2.40
3895 4329 4.580580 AGCAAATAAAAGGGCCTTCGATAG 59.419 41.667 21.20 12.42 0.00 2.08
3898 4332 6.495706 CAAATAAAAGGGCCTTCGATAGTTC 58.504 40.000 21.20 0.00 37.40 3.01
3903 4337 0.651031 GGCCTTCGATAGTTCGCAAC 59.349 55.000 0.00 0.00 45.10 4.17
3930 4364 4.351192 CCTGTTGTTTGAGTGTACTTTGC 58.649 43.478 0.00 0.00 0.00 3.68
3945 4379 4.944619 ACTTTGCTCGATGATCCTCATA 57.055 40.909 0.00 0.00 37.20 2.15
3978 4412 8.033038 GTCATGAAGTGTTTATGGTAGTACAGA 58.967 37.037 0.00 0.00 0.00 3.41
4002 4436 0.463833 GGAAGATGGCCGGTCGATTT 60.464 55.000 0.00 0.00 0.00 2.17
4003 4437 0.657840 GAAGATGGCCGGTCGATTTG 59.342 55.000 0.00 0.00 0.00 2.32
4033 4467 9.019656 AGCTTTGTTAATCCATTGTATTGTACA 57.980 29.630 0.00 0.00 36.79 2.90
4034 4468 9.801873 GCTTTGTTAATCCATTGTATTGTACAT 57.198 29.630 0.00 0.00 38.68 2.29
4036 4470 9.579768 TTTGTTAATCCATTGTATTGTACATGC 57.420 29.630 0.00 0.00 38.68 4.06
4037 4471 8.286191 TGTTAATCCATTGTATTGTACATGCA 57.714 30.769 0.00 0.00 38.68 3.96
4049 4483 3.081061 TGTACATGCAAGTTGATCACCC 58.919 45.455 7.16 0.00 0.00 4.61
4107 4541 9.706529 ACTATATGTGATGGATCTTATAGCTGA 57.293 33.333 0.00 0.00 0.00 4.26
4128 4562 8.159344 GCTGATAGCTATGAGGTATTGTTTTT 57.841 34.615 20.01 0.00 38.85 1.94
4154 4588 2.488153 GGCTTGTAATGTGTTCCCAGTC 59.512 50.000 0.00 0.00 0.00 3.51
4155 4589 3.146066 GCTTGTAATGTGTTCCCAGTCA 58.854 45.455 0.00 0.00 0.00 3.41
4156 4590 3.189287 GCTTGTAATGTGTTCCCAGTCAG 59.811 47.826 0.00 0.00 0.00 3.51
4157 4591 4.389374 CTTGTAATGTGTTCCCAGTCAGT 58.611 43.478 0.00 0.00 0.00 3.41
4158 4592 4.431416 TGTAATGTGTTCCCAGTCAGTT 57.569 40.909 0.00 0.00 0.00 3.16
4159 4593 4.787551 TGTAATGTGTTCCCAGTCAGTTT 58.212 39.130 0.00 0.00 0.00 2.66
4160 4594 5.197451 TGTAATGTGTTCCCAGTCAGTTTT 58.803 37.500 0.00 0.00 0.00 2.43
4161 4595 5.654650 TGTAATGTGTTCCCAGTCAGTTTTT 59.345 36.000 0.00 0.00 0.00 1.94
4187 4621 5.530176 TTTTTGGAGGGATAACTAGGCTT 57.470 39.130 0.00 0.00 0.00 4.35
4188 4622 5.530176 TTTTGGAGGGATAACTAGGCTTT 57.470 39.130 0.00 0.00 0.00 3.51
4189 4623 6.645884 TTTTGGAGGGATAACTAGGCTTTA 57.354 37.500 0.00 0.00 0.00 1.85
4190 4624 6.841781 TTTGGAGGGATAACTAGGCTTTAT 57.158 37.500 0.00 0.00 0.00 1.40
4191 4625 6.841781 TTGGAGGGATAACTAGGCTTTATT 57.158 37.500 0.00 0.00 0.00 1.40
4192 4626 6.187727 TGGAGGGATAACTAGGCTTTATTG 57.812 41.667 0.00 0.00 0.00 1.90
4193 4627 5.004448 GGAGGGATAACTAGGCTTTATTGC 58.996 45.833 0.00 0.00 0.00 3.56
4194 4628 5.456186 GGAGGGATAACTAGGCTTTATTGCA 60.456 44.000 0.00 0.00 34.04 4.08
4195 4629 6.206180 AGGGATAACTAGGCTTTATTGCAT 57.794 37.500 0.00 0.00 34.04 3.96
4196 4630 6.006449 AGGGATAACTAGGCTTTATTGCATG 58.994 40.000 0.00 0.00 34.04 4.06
4197 4631 5.183904 GGGATAACTAGGCTTTATTGCATGG 59.816 44.000 0.00 0.00 34.04 3.66
4198 4632 5.770162 GGATAACTAGGCTTTATTGCATGGT 59.230 40.000 0.00 0.00 39.92 3.55
4199 4633 6.265422 GGATAACTAGGCTTTATTGCATGGTT 59.735 38.462 7.83 7.83 46.60 3.67
4201 4635 6.699575 AACTAGGCTTTATTGCATGGTTAG 57.300 37.500 0.00 0.00 44.11 2.34
4202 4636 6.001449 ACTAGGCTTTATTGCATGGTTAGA 57.999 37.500 0.00 0.00 35.04 2.10
4203 4637 6.423182 ACTAGGCTTTATTGCATGGTTAGAA 58.577 36.000 0.00 0.00 35.04 2.10
4204 4638 7.062957 ACTAGGCTTTATTGCATGGTTAGAAT 58.937 34.615 0.00 0.00 35.04 2.40
4205 4639 6.152932 AGGCTTTATTGCATGGTTAGAATG 57.847 37.500 0.00 0.00 34.04 2.67
4206 4640 5.658190 AGGCTTTATTGCATGGTTAGAATGT 59.342 36.000 0.00 0.00 34.04 2.71
4207 4641 6.155049 AGGCTTTATTGCATGGTTAGAATGTT 59.845 34.615 0.00 0.00 34.04 2.71
4208 4642 6.818142 GGCTTTATTGCATGGTTAGAATGTTT 59.182 34.615 0.00 0.00 34.04 2.83
4209 4643 7.978975 GGCTTTATTGCATGGTTAGAATGTTTA 59.021 33.333 0.00 0.00 34.04 2.01
4210 4644 8.807581 GCTTTATTGCATGGTTAGAATGTTTAC 58.192 33.333 0.00 0.00 0.00 2.01
4211 4645 9.853555 CTTTATTGCATGGTTAGAATGTTTACA 57.146 29.630 0.00 0.00 0.00 2.41
4212 4646 9.853555 TTTATTGCATGGTTAGAATGTTTACAG 57.146 29.630 0.00 0.00 0.00 2.74
4213 4647 5.895636 TGCATGGTTAGAATGTTTACAGG 57.104 39.130 0.00 0.00 0.00 4.00
4214 4648 4.704540 TGCATGGTTAGAATGTTTACAGGG 59.295 41.667 0.00 0.00 0.00 4.45
4215 4649 4.947388 GCATGGTTAGAATGTTTACAGGGA 59.053 41.667 0.00 0.00 0.00 4.20
4216 4650 5.594317 GCATGGTTAGAATGTTTACAGGGAT 59.406 40.000 0.00 0.00 0.00 3.85
4217 4651 6.770785 GCATGGTTAGAATGTTTACAGGGATA 59.229 38.462 0.00 0.00 0.00 2.59
4218 4652 7.284489 GCATGGTTAGAATGTTTACAGGGATAA 59.716 37.037 0.00 0.00 0.00 1.75
4219 4653 9.354673 CATGGTTAGAATGTTTACAGGGATAAT 57.645 33.333 0.00 0.00 0.00 1.28
4232 4666 9.685276 TTTACAGGGATAATATTAGCATCATGG 57.315 33.333 12.51 0.00 0.00 3.66
4233 4667 6.666678 ACAGGGATAATATTAGCATCATGGG 58.333 40.000 12.51 0.00 0.00 4.00
4234 4668 6.066690 CAGGGATAATATTAGCATCATGGGG 58.933 44.000 12.51 0.00 0.00 4.96
4235 4669 5.978752 AGGGATAATATTAGCATCATGGGGA 59.021 40.000 12.51 0.00 0.00 4.81
4236 4670 6.626965 AGGGATAATATTAGCATCATGGGGAT 59.373 38.462 12.51 0.00 36.39 3.85
4244 4678 1.915141 CATCATGGGGATGCCCTAAC 58.085 55.000 24.41 0.00 46.35 2.34
4245 4679 0.779997 ATCATGGGGATGCCCTAACC 59.220 55.000 24.41 0.00 44.66 2.85
4246 4680 0.625980 TCATGGGGATGCCCTAACCA 60.626 55.000 24.41 2.20 44.66 3.67
4247 4681 0.484212 CATGGGGATGCCCTAACCAT 59.516 55.000 24.41 4.92 44.66 3.55
4248 4682 1.710244 CATGGGGATGCCCTAACCATA 59.290 52.381 24.41 0.49 44.66 2.74
4249 4683 2.147946 TGGGGATGCCCTAACCATAT 57.852 50.000 24.41 0.00 44.66 1.78
4250 4684 3.299591 TGGGGATGCCCTAACCATATA 57.700 47.619 24.41 0.00 44.66 0.86
4251 4685 3.826586 TGGGGATGCCCTAACCATATAT 58.173 45.455 24.41 0.00 44.66 0.86
4252 4686 3.527253 TGGGGATGCCCTAACCATATATG 59.473 47.826 24.41 5.68 44.66 1.78
4253 4687 3.527665 GGGGATGCCCTAACCATATATGT 59.472 47.826 16.52 0.00 44.66 2.29
4254 4688 4.385310 GGGGATGCCCTAACCATATATGTC 60.385 50.000 16.52 0.00 44.66 3.06
4255 4689 4.475016 GGGATGCCCTAACCATATATGTCT 59.525 45.833 11.73 1.03 41.34 3.41
4256 4690 5.396884 GGGATGCCCTAACCATATATGTCTC 60.397 48.000 11.73 0.00 41.34 3.36
4257 4691 5.396884 GGATGCCCTAACCATATATGTCTCC 60.397 48.000 11.73 1.42 0.00 3.71
4258 4692 3.844211 TGCCCTAACCATATATGTCTCCC 59.156 47.826 11.73 0.00 0.00 4.30
4259 4693 3.200165 GCCCTAACCATATATGTCTCCCC 59.800 52.174 11.73 0.00 0.00 4.81
4260 4694 4.435137 CCCTAACCATATATGTCTCCCCA 58.565 47.826 11.73 0.00 0.00 4.96
4261 4695 4.471386 CCCTAACCATATATGTCTCCCCAG 59.529 50.000 11.73 0.00 0.00 4.45
4262 4696 4.471386 CCTAACCATATATGTCTCCCCAGG 59.529 50.000 11.73 4.67 0.00 4.45
4263 4697 2.921221 ACCATATATGTCTCCCCAGGG 58.079 52.381 11.73 0.00 0.00 4.45
4264 4698 2.200081 CCATATATGTCTCCCCAGGGG 58.800 57.143 20.55 20.55 46.11 4.79
4275 4709 4.843624 CCAGGGGAAGGGAAACAC 57.156 61.111 0.00 0.00 0.00 3.32
4276 4710 1.076727 CCAGGGGAAGGGAAACACC 59.923 63.158 0.00 0.00 38.08 4.16
4277 4711 1.725169 CCAGGGGAAGGGAAACACCA 61.725 60.000 0.00 0.00 41.20 4.17
4278 4712 0.409484 CAGGGGAAGGGAAACACCAT 59.591 55.000 0.00 0.00 41.20 3.55
4279 4713 1.638589 CAGGGGAAGGGAAACACCATA 59.361 52.381 0.00 0.00 41.20 2.74
4280 4714 1.639108 AGGGGAAGGGAAACACCATAC 59.361 52.381 0.00 0.00 41.20 2.39
4281 4715 1.341679 GGGGAAGGGAAACACCATACC 60.342 57.143 0.00 0.00 41.20 2.73
4282 4716 1.639108 GGGAAGGGAAACACCATACCT 59.361 52.381 0.00 0.00 41.20 3.08
4283 4717 2.848071 GGGAAGGGAAACACCATACCTA 59.152 50.000 0.00 0.00 41.20 3.08
4284 4718 3.118000 GGGAAGGGAAACACCATACCTAG 60.118 52.174 0.00 0.00 41.20 3.02
4285 4719 3.542648 GAAGGGAAACACCATACCTAGC 58.457 50.000 0.00 0.00 41.20 3.42
4286 4720 2.846950 AGGGAAACACCATACCTAGCT 58.153 47.619 0.00 0.00 41.20 3.32
4287 4721 4.003584 AGGGAAACACCATACCTAGCTA 57.996 45.455 0.00 0.00 41.20 3.32
4288 4722 4.368067 AGGGAAACACCATACCTAGCTAA 58.632 43.478 0.00 0.00 41.20 3.09
4289 4723 4.163649 AGGGAAACACCATACCTAGCTAAC 59.836 45.833 0.00 0.00 41.20 2.34
4290 4724 4.449131 GGAAACACCATACCTAGCTAACC 58.551 47.826 0.00 0.00 38.79 2.85
4291 4725 4.163649 GGAAACACCATACCTAGCTAACCT 59.836 45.833 0.00 0.00 38.79 3.50
4292 4726 5.364735 GGAAACACCATACCTAGCTAACCTA 59.635 44.000 0.00 0.00 38.79 3.08
4293 4727 6.042897 GGAAACACCATACCTAGCTAACCTAT 59.957 42.308 0.00 0.00 38.79 2.57
4294 4728 6.420913 AACACCATACCTAGCTAACCTATG 57.579 41.667 0.00 0.55 0.00 2.23
4295 4729 5.712752 ACACCATACCTAGCTAACCTATGA 58.287 41.667 11.18 0.00 0.00 2.15
4296 4730 5.775701 ACACCATACCTAGCTAACCTATGAG 59.224 44.000 11.18 7.56 0.00 2.90
4297 4731 4.773149 ACCATACCTAGCTAACCTATGAGC 59.227 45.833 11.18 0.00 39.08 4.26
4299 4733 5.482175 CCATACCTAGCTAACCTATGAGCTT 59.518 44.000 1.16 0.00 46.99 3.74
4300 4734 6.350612 CCATACCTAGCTAACCTATGAGCTTC 60.351 46.154 1.16 0.00 46.99 3.86
4301 4735 4.547671 ACCTAGCTAACCTATGAGCTTCA 58.452 43.478 1.16 0.00 46.99 3.02
4302 4736 4.962995 ACCTAGCTAACCTATGAGCTTCAA 59.037 41.667 1.16 0.00 46.99 2.69
4303 4737 5.425539 ACCTAGCTAACCTATGAGCTTCAAA 59.574 40.000 1.16 0.00 46.99 2.69
4304 4738 6.070194 ACCTAGCTAACCTATGAGCTTCAAAA 60.070 38.462 1.16 0.00 46.99 2.44
4305 4739 6.995091 CCTAGCTAACCTATGAGCTTCAAAAT 59.005 38.462 1.16 0.00 46.99 1.82
4306 4740 7.500559 CCTAGCTAACCTATGAGCTTCAAAATT 59.499 37.037 1.16 0.00 46.99 1.82
4307 4741 7.709149 AGCTAACCTATGAGCTTCAAAATTT 57.291 32.000 0.00 0.00 46.99 1.82
4308 4742 7.542025 AGCTAACCTATGAGCTTCAAAATTTG 58.458 34.615 0.00 0.00 46.99 2.32
4309 4743 7.394359 AGCTAACCTATGAGCTTCAAAATTTGA 59.606 33.333 4.03 4.03 46.99 2.69
4310 4744 8.028938 GCTAACCTATGAGCTTCAAAATTTGAA 58.971 33.333 18.68 18.68 46.68 2.69
4323 4757 8.839310 TTCAAAATTTGAAGTTCTTGGTTCAA 57.161 26.923 16.28 0.00 44.21 2.69
4330 4764 8.438676 TTTGAAGTTCTTGGTTCAAAAACAAA 57.561 26.923 4.17 0.00 45.28 2.83
4331 4765 8.438676 TTGAAGTTCTTGGTTCAAAAACAAAA 57.561 26.923 4.17 0.00 39.22 2.44
4332 4766 8.614469 TGAAGTTCTTGGTTCAAAAACAAAAT 57.386 26.923 4.17 0.00 37.10 1.82
4333 4767 9.061435 TGAAGTTCTTGGTTCAAAAACAAAATT 57.939 25.926 4.17 0.00 37.10 1.82
4336 4770 9.495572 AGTTCTTGGTTCAAAAACAAAATTACA 57.504 25.926 0.66 0.00 37.10 2.41
4339 4773 8.447053 TCTTGGTTCAAAAACAAAATTACAAGC 58.553 29.630 0.00 0.00 37.10 4.01
4340 4774 7.078011 TGGTTCAAAAACAAAATTACAAGCC 57.922 32.000 0.00 0.00 37.10 4.35
4341 4775 6.655003 TGGTTCAAAAACAAAATTACAAGCCA 59.345 30.769 0.00 0.00 37.10 4.75
4342 4776 7.337942 TGGTTCAAAAACAAAATTACAAGCCAT 59.662 29.630 0.00 0.00 37.10 4.40
4343 4777 7.643371 GGTTCAAAAACAAAATTACAAGCCATG 59.357 33.333 0.00 0.00 37.10 3.66
4344 4778 8.394121 GTTCAAAAACAAAATTACAAGCCATGA 58.606 29.630 0.00 0.00 35.36 3.07
4345 4779 8.498054 TCAAAAACAAAATTACAAGCCATGAA 57.502 26.923 0.00 0.00 0.00 2.57
4346 4780 8.950210 TCAAAAACAAAATTACAAGCCATGAAA 58.050 25.926 0.00 0.00 0.00 2.69
4347 4781 9.224058 CAAAAACAAAATTACAAGCCATGAAAG 57.776 29.630 0.00 0.00 0.00 2.62
4348 4782 8.729805 AAAACAAAATTACAAGCCATGAAAGA 57.270 26.923 0.00 0.00 0.00 2.52
4349 4783 8.729805 AAACAAAATTACAAGCCATGAAAGAA 57.270 26.923 0.00 0.00 0.00 2.52
4350 4784 7.713764 ACAAAATTACAAGCCATGAAAGAAC 57.286 32.000 0.00 0.00 0.00 3.01
4351 4785 7.500141 ACAAAATTACAAGCCATGAAAGAACT 58.500 30.769 0.00 0.00 0.00 3.01
4352 4786 8.637986 ACAAAATTACAAGCCATGAAAGAACTA 58.362 29.630 0.00 0.00 0.00 2.24
4353 4787 9.132521 CAAAATTACAAGCCATGAAAGAACTAG 57.867 33.333 0.00 0.00 0.00 2.57
4354 4788 8.409358 AAATTACAAGCCATGAAAGAACTAGT 57.591 30.769 0.00 0.00 0.00 2.57
4355 4789 9.515226 AAATTACAAGCCATGAAAGAACTAGTA 57.485 29.630 0.00 0.00 0.00 1.82
4356 4790 8.723942 ATTACAAGCCATGAAAGAACTAGTAG 57.276 34.615 0.00 0.00 0.00 2.57
4357 4791 6.115448 ACAAGCCATGAAAGAACTAGTAGT 57.885 37.500 0.00 0.00 0.00 2.73
4358 4792 6.534634 ACAAGCCATGAAAGAACTAGTAGTT 58.465 36.000 15.48 15.48 41.95 2.24
4359 4793 6.998673 ACAAGCCATGAAAGAACTAGTAGTTT 59.001 34.615 16.56 1.19 38.80 2.66
4360 4794 7.173390 ACAAGCCATGAAAGAACTAGTAGTTTC 59.827 37.037 16.56 17.32 38.80 2.78
4361 4795 7.010339 AGCCATGAAAGAACTAGTAGTTTCT 57.990 36.000 16.56 11.81 38.80 2.52
4362 4796 6.876257 AGCCATGAAAGAACTAGTAGTTTCTG 59.124 38.462 16.56 17.71 38.80 3.02
4363 4797 6.651225 GCCATGAAAGAACTAGTAGTTTCTGT 59.349 38.462 16.56 10.12 38.80 3.41
4364 4798 7.148557 GCCATGAAAGAACTAGTAGTTTCTGTC 60.149 40.741 16.56 17.06 38.80 3.51
4365 4799 7.872993 CCATGAAAGAACTAGTAGTTTCTGTCA 59.127 37.037 23.34 23.34 38.80 3.58
4366 4800 8.704234 CATGAAAGAACTAGTAGTTTCTGTCAC 58.296 37.037 23.46 10.57 38.80 3.67
4367 4801 7.208080 TGAAAGAACTAGTAGTTTCTGTCACC 58.792 38.462 16.56 1.97 38.80 4.02
4368 4802 6.980416 AAGAACTAGTAGTTTCTGTCACCT 57.020 37.500 16.56 4.19 38.80 4.00
4369 4803 6.578163 AGAACTAGTAGTTTCTGTCACCTC 57.422 41.667 16.56 0.57 38.80 3.85
4370 4804 6.308566 AGAACTAGTAGTTTCTGTCACCTCT 58.691 40.000 16.56 2.86 38.80 3.69
4371 4805 6.431852 AGAACTAGTAGTTTCTGTCACCTCTC 59.568 42.308 16.56 0.00 38.80 3.20
4372 4806 5.883180 ACTAGTAGTTTCTGTCACCTCTCT 58.117 41.667 0.00 0.00 0.00 3.10
4373 4807 7.018487 ACTAGTAGTTTCTGTCACCTCTCTA 57.982 40.000 0.00 0.00 0.00 2.43
4374 4808 7.460071 ACTAGTAGTTTCTGTCACCTCTCTAA 58.540 38.462 0.00 0.00 0.00 2.10
4375 4809 8.110908 ACTAGTAGTTTCTGTCACCTCTCTAAT 58.889 37.037 0.00 0.00 0.00 1.73
4376 4810 7.784470 AGTAGTTTCTGTCACCTCTCTAATT 57.216 36.000 0.00 0.00 0.00 1.40
4377 4811 8.880991 AGTAGTTTCTGTCACCTCTCTAATTA 57.119 34.615 0.00 0.00 0.00 1.40
4378 4812 9.482175 AGTAGTTTCTGTCACCTCTCTAATTAT 57.518 33.333 0.00 0.00 0.00 1.28
4379 4813 9.522804 GTAGTTTCTGTCACCTCTCTAATTATG 57.477 37.037 0.00 0.00 0.00 1.90
4380 4814 7.044798 AGTTTCTGTCACCTCTCTAATTATGC 58.955 38.462 0.00 0.00 0.00 3.14
4381 4815 6.798427 TTCTGTCACCTCTCTAATTATGCT 57.202 37.500 0.00 0.00 0.00 3.79
4382 4816 6.798427 TCTGTCACCTCTCTAATTATGCTT 57.202 37.500 0.00 0.00 0.00 3.91
4383 4817 6.577103 TCTGTCACCTCTCTAATTATGCTTG 58.423 40.000 0.00 0.00 0.00 4.01
4384 4818 5.118990 TGTCACCTCTCTAATTATGCTTGC 58.881 41.667 0.00 0.00 0.00 4.01
4385 4819 5.118990 GTCACCTCTCTAATTATGCTTGCA 58.881 41.667 0.00 0.00 0.00 4.08
4386 4820 5.762218 GTCACCTCTCTAATTATGCTTGCAT 59.238 40.000 12.88 12.88 0.00 3.96
4387 4821 6.931281 GTCACCTCTCTAATTATGCTTGCATA 59.069 38.462 10.84 10.84 0.00 3.14
4388 4822 7.442364 GTCACCTCTCTAATTATGCTTGCATAA 59.558 37.037 24.35 24.35 0.00 1.90
4389 4823 8.159447 TCACCTCTCTAATTATGCTTGCATAAT 58.841 33.333 26.05 26.05 38.86 1.28
4390 4824 8.790718 CACCTCTCTAATTATGCTTGCATAATT 58.209 33.333 35.22 35.22 44.86 1.40
4391 4825 8.790718 ACCTCTCTAATTATGCTTGCATAATTG 58.209 33.333 37.46 30.50 43.52 2.32
4403 4837 2.659428 GCATAATTGCCTCCAACTCCT 58.341 47.619 0.00 0.00 43.38 3.69
4404 4838 3.026694 GCATAATTGCCTCCAACTCCTT 58.973 45.455 0.00 0.00 43.38 3.36
4405 4839 3.181483 GCATAATTGCCTCCAACTCCTTG 60.181 47.826 0.00 0.00 43.38 3.61
4406 4840 1.260544 AATTGCCTCCAACTCCTTGC 58.739 50.000 0.00 0.00 32.95 4.01
4407 4841 0.407139 ATTGCCTCCAACTCCTTGCT 59.593 50.000 0.00 0.00 32.95 3.91
4408 4842 0.185901 TTGCCTCCAACTCCTTGCTT 59.814 50.000 0.00 0.00 0.00 3.91
4409 4843 0.538057 TGCCTCCAACTCCTTGCTTG 60.538 55.000 0.00 0.00 0.00 4.01
4410 4844 0.250901 GCCTCCAACTCCTTGCTTGA 60.251 55.000 0.00 0.00 0.00 3.02
4411 4845 1.615384 GCCTCCAACTCCTTGCTTGAT 60.615 52.381 0.00 0.00 0.00 2.57
4412 4846 2.089980 CCTCCAACTCCTTGCTTGATG 58.910 52.381 0.00 0.00 0.00 3.07
4413 4847 2.553904 CCTCCAACTCCTTGCTTGATGT 60.554 50.000 0.00 0.00 0.00 3.06
4414 4848 2.486982 CTCCAACTCCTTGCTTGATGTG 59.513 50.000 0.00 0.00 0.00 3.21
4415 4849 2.158623 TCCAACTCCTTGCTTGATGTGT 60.159 45.455 0.00 0.00 0.00 3.72
4416 4850 3.072330 TCCAACTCCTTGCTTGATGTGTA 59.928 43.478 0.00 0.00 0.00 2.90
4417 4851 3.820467 CCAACTCCTTGCTTGATGTGTAA 59.180 43.478 0.00 0.00 0.00 2.41
4418 4852 4.083110 CCAACTCCTTGCTTGATGTGTAAG 60.083 45.833 0.00 0.00 0.00 2.34
4419 4853 4.623932 ACTCCTTGCTTGATGTGTAAGA 57.376 40.909 0.00 0.00 30.47 2.10
4420 4854 5.171339 ACTCCTTGCTTGATGTGTAAGAT 57.829 39.130 0.00 0.00 30.47 2.40
4421 4855 4.940046 ACTCCTTGCTTGATGTGTAAGATG 59.060 41.667 0.00 0.00 30.47 2.90
4422 4856 5.164620 TCCTTGCTTGATGTGTAAGATGA 57.835 39.130 0.00 0.00 30.47 2.92
4423 4857 4.937620 TCCTTGCTTGATGTGTAAGATGAC 59.062 41.667 0.00 0.00 30.47 3.06
4424 4858 4.940046 CCTTGCTTGATGTGTAAGATGACT 59.060 41.667 0.00 0.00 30.47 3.41
4425 4859 5.413833 CCTTGCTTGATGTGTAAGATGACTT 59.586 40.000 0.00 0.00 39.81 3.01
4426 4860 5.868043 TGCTTGATGTGTAAGATGACTTG 57.132 39.130 0.00 0.00 37.53 3.16
4427 4861 5.308014 TGCTTGATGTGTAAGATGACTTGT 58.692 37.500 0.00 0.00 37.53 3.16
4428 4862 5.764686 TGCTTGATGTGTAAGATGACTTGTT 59.235 36.000 0.00 0.00 37.53 2.83
4429 4863 6.262944 TGCTTGATGTGTAAGATGACTTGTTT 59.737 34.615 0.00 0.00 37.53 2.83
4430 4864 7.443879 TGCTTGATGTGTAAGATGACTTGTTTA 59.556 33.333 0.00 0.00 37.53 2.01
4431 4865 7.746475 GCTTGATGTGTAAGATGACTTGTTTAC 59.254 37.037 0.00 0.00 37.53 2.01
4432 4866 8.669946 TTGATGTGTAAGATGACTTGTTTACA 57.330 30.769 0.00 0.00 37.53 2.41
4433 4867 8.669946 TGATGTGTAAGATGACTTGTTTACAA 57.330 30.769 0.00 0.00 37.65 2.41
4434 4868 9.283768 TGATGTGTAAGATGACTTGTTTACAAT 57.716 29.630 0.00 0.00 37.65 2.71
4435 4869 9.760660 GATGTGTAAGATGACTTGTTTACAATC 57.239 33.333 0.00 0.00 37.65 2.67
4436 4870 8.902540 TGTGTAAGATGACTTGTTTACAATCT 57.097 30.769 0.00 0.00 37.65 2.40
4437 4871 8.773645 TGTGTAAGATGACTTGTTTACAATCTG 58.226 33.333 0.00 0.00 37.65 2.90
4438 4872 8.988934 GTGTAAGATGACTTGTTTACAATCTGA 58.011 33.333 0.00 0.00 37.65 3.27
4439 4873 8.988934 TGTAAGATGACTTGTTTACAATCTGAC 58.011 33.333 0.00 1.17 37.53 3.51
4440 4874 6.712241 AGATGACTTGTTTACAATCTGACG 57.288 37.500 0.00 0.00 35.02 4.35
4441 4875 4.725556 TGACTTGTTTACAATCTGACGC 57.274 40.909 0.00 0.00 35.02 5.19
4442 4876 3.496884 TGACTTGTTTACAATCTGACGCC 59.503 43.478 0.00 0.00 35.02 5.68
4443 4877 3.472652 ACTTGTTTACAATCTGACGCCA 58.527 40.909 0.00 0.00 35.02 5.69
4444 4878 3.250040 ACTTGTTTACAATCTGACGCCAC 59.750 43.478 0.00 0.00 35.02 5.01
4445 4879 2.147958 TGTTTACAATCTGACGCCACC 58.852 47.619 0.00 0.00 0.00 4.61
4446 4880 2.224426 TGTTTACAATCTGACGCCACCT 60.224 45.455 0.00 0.00 0.00 4.00
4447 4881 2.093306 TTACAATCTGACGCCACCTG 57.907 50.000 0.00 0.00 0.00 4.00
4448 4882 1.262417 TACAATCTGACGCCACCTGA 58.738 50.000 0.00 0.00 0.00 3.86
4449 4883 0.396435 ACAATCTGACGCCACCTGAA 59.604 50.000 0.00 0.00 0.00 3.02
4450 4884 1.003580 ACAATCTGACGCCACCTGAAT 59.996 47.619 0.00 0.00 0.00 2.57
4451 4885 2.236146 ACAATCTGACGCCACCTGAATA 59.764 45.455 0.00 0.00 0.00 1.75
4452 4886 2.604046 ATCTGACGCCACCTGAATAC 57.396 50.000 0.00 0.00 0.00 1.89
4453 4887 1.557099 TCTGACGCCACCTGAATACT 58.443 50.000 0.00 0.00 0.00 2.12
4454 4888 1.899814 TCTGACGCCACCTGAATACTT 59.100 47.619 0.00 0.00 0.00 2.24
4455 4889 2.301870 TCTGACGCCACCTGAATACTTT 59.698 45.455 0.00 0.00 0.00 2.66
4456 4890 2.416547 CTGACGCCACCTGAATACTTTG 59.583 50.000 0.00 0.00 0.00 2.77
4457 4891 1.130561 GACGCCACCTGAATACTTTGC 59.869 52.381 0.00 0.00 0.00 3.68
4458 4892 1.164411 CGCCACCTGAATACTTTGCA 58.836 50.000 0.00 0.00 0.00 4.08
4459 4893 1.539388 CGCCACCTGAATACTTTGCAA 59.461 47.619 0.00 0.00 0.00 4.08
4460 4894 2.030363 CGCCACCTGAATACTTTGCAAA 60.030 45.455 12.14 12.14 0.00 3.68
4461 4895 3.317150 GCCACCTGAATACTTTGCAAAC 58.683 45.455 8.05 0.00 0.00 2.93
4462 4896 3.005791 GCCACCTGAATACTTTGCAAACT 59.994 43.478 8.05 1.87 0.00 2.66
4463 4897 4.798574 CCACCTGAATACTTTGCAAACTC 58.201 43.478 8.05 3.58 0.00 3.01
4464 4898 4.278170 CCACCTGAATACTTTGCAAACTCA 59.722 41.667 8.05 7.87 0.00 3.41
4465 4899 5.221224 CCACCTGAATACTTTGCAAACTCAA 60.221 40.000 8.05 0.00 0.00 3.02
4466 4900 6.272318 CACCTGAATACTTTGCAAACTCAAA 58.728 36.000 8.05 0.00 35.01 2.69
4467 4901 6.925165 CACCTGAATACTTTGCAAACTCAAAT 59.075 34.615 8.05 0.00 35.64 2.32
4468 4902 7.115378 CACCTGAATACTTTGCAAACTCAAATC 59.885 37.037 8.05 3.25 35.64 2.17
4469 4903 6.587608 CCTGAATACTTTGCAAACTCAAATCC 59.412 38.462 8.05 0.00 35.64 3.01
4470 4904 6.454795 TGAATACTTTGCAAACTCAAATCCC 58.545 36.000 8.05 0.00 35.64 3.85
4471 4905 6.267471 TGAATACTTTGCAAACTCAAATCCCT 59.733 34.615 8.05 0.00 35.64 4.20
4472 4906 6.670695 ATACTTTGCAAACTCAAATCCCTT 57.329 33.333 8.05 0.00 35.64 3.95
4473 4907 4.696455 ACTTTGCAAACTCAAATCCCTTG 58.304 39.130 8.05 0.00 35.64 3.61
4474 4908 2.818130 TGCAAACTCAAATCCCTTGC 57.182 45.000 0.00 0.00 42.12 4.01
4475 4909 1.344114 TGCAAACTCAAATCCCTTGCC 59.656 47.619 2.93 0.00 41.29 4.52
4476 4910 1.344114 GCAAACTCAAATCCCTTGCCA 59.656 47.619 0.00 0.00 37.10 4.92
4477 4911 2.224257 GCAAACTCAAATCCCTTGCCAA 60.224 45.455 0.00 0.00 37.10 4.52
4478 4912 3.557686 GCAAACTCAAATCCCTTGCCAAT 60.558 43.478 0.00 0.00 37.10 3.16
4479 4913 3.967332 AACTCAAATCCCTTGCCAATG 57.033 42.857 0.00 0.00 34.76 2.82
4480 4914 1.551883 ACTCAAATCCCTTGCCAATGC 59.448 47.619 0.00 0.00 34.76 3.56
4481 4915 1.829222 CTCAAATCCCTTGCCAATGCT 59.171 47.619 0.00 0.00 38.71 3.79
4482 4916 2.235402 CTCAAATCCCTTGCCAATGCTT 59.765 45.455 0.00 0.00 38.71 3.91
4483 4917 2.027929 TCAAATCCCTTGCCAATGCTTG 60.028 45.455 0.00 0.00 38.71 4.01
4484 4918 1.941377 AATCCCTTGCCAATGCTTGA 58.059 45.000 0.00 0.00 38.71 3.02
4485 4919 1.481871 ATCCCTTGCCAATGCTTGAG 58.518 50.000 0.00 0.00 38.71 3.02
4486 4920 1.217244 CCCTTGCCAATGCTTGAGC 59.783 57.895 0.00 0.00 42.50 4.26
4487 4921 1.255667 CCCTTGCCAATGCTTGAGCT 61.256 55.000 4.44 0.00 42.66 4.09
4488 4922 0.606604 CCTTGCCAATGCTTGAGCTT 59.393 50.000 4.44 0.00 42.66 3.74
4489 4923 1.403780 CCTTGCCAATGCTTGAGCTTC 60.404 52.381 4.44 0.00 42.66 3.86
4490 4924 1.544691 CTTGCCAATGCTTGAGCTTCT 59.455 47.619 4.44 0.00 42.66 2.85
4491 4925 1.171308 TGCCAATGCTTGAGCTTCTC 58.829 50.000 4.44 0.00 42.66 2.87
4492 4926 0.098376 GCCAATGCTTGAGCTTCTCG 59.902 55.000 4.44 0.00 42.66 4.04
4493 4927 1.730501 CCAATGCTTGAGCTTCTCGA 58.269 50.000 4.44 0.00 42.66 4.04
4494 4928 1.396301 CCAATGCTTGAGCTTCTCGAC 59.604 52.381 4.44 0.00 42.66 4.20
4495 4929 2.071540 CAATGCTTGAGCTTCTCGACA 58.928 47.619 4.44 0.00 42.66 4.35
4496 4930 1.719600 ATGCTTGAGCTTCTCGACAC 58.280 50.000 4.44 0.00 42.66 3.67
4497 4931 0.664466 TGCTTGAGCTTCTCGACACG 60.664 55.000 4.44 0.00 42.66 4.49
4498 4932 1.950098 GCTTGAGCTTCTCGACACGC 61.950 60.000 0.00 0.00 38.21 5.34
4499 4933 1.347817 CTTGAGCTTCTCGACACGCC 61.348 60.000 0.00 0.00 32.35 5.68
4500 4934 2.082629 TTGAGCTTCTCGACACGCCA 62.083 55.000 0.00 0.00 32.35 5.69
4501 4935 1.372997 GAGCTTCTCGACACGCCAA 60.373 57.895 0.00 0.00 0.00 4.52
4502 4936 0.944311 GAGCTTCTCGACACGCCAAA 60.944 55.000 0.00 0.00 0.00 3.28
4503 4937 0.946221 AGCTTCTCGACACGCCAAAG 60.946 55.000 0.00 0.00 0.00 2.77
4504 4938 1.493311 CTTCTCGACACGCCAAAGC 59.507 57.895 0.00 0.00 0.00 3.51
4505 4939 0.946221 CTTCTCGACACGCCAAAGCT 60.946 55.000 0.00 0.00 36.60 3.74
4506 4940 0.531974 TTCTCGACACGCCAAAGCTT 60.532 50.000 0.00 0.00 36.60 3.74
4507 4941 0.944311 TCTCGACACGCCAAAGCTTC 60.944 55.000 0.00 0.00 36.60 3.86
4508 4942 2.170985 CGACACGCCAAAGCTTCG 59.829 61.111 0.00 1.25 36.60 3.79
4509 4943 2.307309 CGACACGCCAAAGCTTCGA 61.307 57.895 12.42 0.00 36.22 3.71
4510 4944 1.204312 GACACGCCAAAGCTTCGAC 59.796 57.895 12.42 0.00 36.60 4.20
4511 4945 1.222115 GACACGCCAAAGCTTCGACT 61.222 55.000 12.42 0.00 36.60 4.18
4512 4946 1.205064 CACGCCAAAGCTTCGACTG 59.795 57.895 12.42 1.10 36.60 3.51
4513 4947 1.227556 ACGCCAAAGCTTCGACTGT 60.228 52.632 12.42 0.00 36.60 3.55
4514 4948 0.032952 ACGCCAAAGCTTCGACTGTA 59.967 50.000 12.42 0.00 36.60 2.74
4515 4949 0.716108 CGCCAAAGCTTCGACTGTAG 59.284 55.000 0.00 0.00 36.60 2.74
4516 4950 1.668919 CGCCAAAGCTTCGACTGTAGA 60.669 52.381 0.00 0.00 36.60 2.59
4517 4951 2.622436 GCCAAAGCTTCGACTGTAGAT 58.378 47.619 0.00 0.00 35.50 1.98
4518 4952 2.349886 GCCAAAGCTTCGACTGTAGATG 59.650 50.000 0.00 0.00 35.50 2.90
4519 4953 2.932614 CCAAAGCTTCGACTGTAGATGG 59.067 50.000 0.00 0.00 0.00 3.51
4520 4954 3.368427 CCAAAGCTTCGACTGTAGATGGA 60.368 47.826 0.00 0.00 0.00 3.41
4521 4955 4.437239 CAAAGCTTCGACTGTAGATGGAT 58.563 43.478 0.00 0.00 0.00 3.41
4522 4956 4.314740 AAGCTTCGACTGTAGATGGATC 57.685 45.455 0.00 0.00 0.00 3.36
4523 4957 2.625790 AGCTTCGACTGTAGATGGATCC 59.374 50.000 4.20 4.20 0.00 3.36
4524 4958 2.605823 GCTTCGACTGTAGATGGATCCG 60.606 54.545 7.39 0.00 0.00 4.18
4525 4959 2.343484 TCGACTGTAGATGGATCCGT 57.657 50.000 6.04 6.04 0.00 4.69
4526 4960 1.947456 TCGACTGTAGATGGATCCGTG 59.053 52.381 12.38 0.00 0.00 4.94
4527 4961 1.001268 CGACTGTAGATGGATCCGTGG 60.001 57.143 12.38 0.00 0.00 4.94
4528 4962 0.753262 ACTGTAGATGGATCCGTGGC 59.247 55.000 12.38 0.00 0.00 5.01
4529 4963 1.043816 CTGTAGATGGATCCGTGGCT 58.956 55.000 12.38 5.77 0.00 4.75
4530 4964 1.000283 CTGTAGATGGATCCGTGGCTC 60.000 57.143 12.38 0.00 0.00 4.70
4531 4965 0.318762 GTAGATGGATCCGTGGCTCC 59.681 60.000 12.38 1.72 0.00 4.70
4532 4966 0.188587 TAGATGGATCCGTGGCTCCT 59.811 55.000 12.38 4.20 32.12 3.69
4533 4967 0.692419 AGATGGATCCGTGGCTCCTT 60.692 55.000 12.38 3.82 32.12 3.36
4534 4968 0.533755 GATGGATCCGTGGCTCCTTG 60.534 60.000 12.38 0.00 32.12 3.61
4535 4969 2.514824 GGATCCGTGGCTCCTTGC 60.515 66.667 0.00 0.00 41.94 4.01
4536 4970 2.268920 GATCCGTGGCTCCTTGCA 59.731 61.111 0.00 0.00 45.15 4.08
4537 4971 2.045926 ATCCGTGGCTCCTTGCAC 60.046 61.111 0.00 0.00 45.15 4.57
4538 4972 2.803155 GATCCGTGGCTCCTTGCACA 62.803 60.000 0.00 0.00 45.15 4.57
4539 4973 2.410322 ATCCGTGGCTCCTTGCACAA 62.410 55.000 0.00 0.00 45.15 3.33
4540 4974 2.639286 CGTGGCTCCTTGCACAAC 59.361 61.111 0.00 0.00 45.15 3.32
4541 4975 2.908073 CGTGGCTCCTTGCACAACC 61.908 63.158 0.00 0.00 45.15 3.77
4542 4976 1.827789 GTGGCTCCTTGCACAACCA 60.828 57.895 0.00 0.00 45.15 3.67
4543 4977 1.529010 TGGCTCCTTGCACAACCAG 60.529 57.895 0.00 0.00 45.15 4.00
4544 4978 1.228245 GGCTCCTTGCACAACCAGA 60.228 57.895 0.00 0.00 45.15 3.86
4545 4979 0.823356 GGCTCCTTGCACAACCAGAA 60.823 55.000 0.00 0.00 45.15 3.02
4546 4980 1.251251 GCTCCTTGCACAACCAGAAT 58.749 50.000 0.00 0.00 42.31 2.40
4547 4981 2.436417 GCTCCTTGCACAACCAGAATA 58.564 47.619 0.00 0.00 42.31 1.75
4548 4982 2.421424 GCTCCTTGCACAACCAGAATAG 59.579 50.000 0.00 0.00 42.31 1.73
4549 4983 3.869912 GCTCCTTGCACAACCAGAATAGA 60.870 47.826 0.00 0.00 42.31 1.98
4550 4984 3.937706 CTCCTTGCACAACCAGAATAGAG 59.062 47.826 0.00 0.00 0.00 2.43
4551 4985 3.012518 CCTTGCACAACCAGAATAGAGG 58.987 50.000 0.00 0.00 0.00 3.69
4552 4986 3.307691 CCTTGCACAACCAGAATAGAGGA 60.308 47.826 0.00 0.00 0.00 3.71
4553 4987 4.521146 CTTGCACAACCAGAATAGAGGAT 58.479 43.478 0.00 0.00 0.00 3.24
4554 4988 4.142609 TGCACAACCAGAATAGAGGATC 57.857 45.455 0.00 0.00 0.00 3.36
4555 4989 3.118261 TGCACAACCAGAATAGAGGATCC 60.118 47.826 2.48 2.48 33.66 3.36
4556 4990 3.745797 GCACAACCAGAATAGAGGATCCC 60.746 52.174 8.55 0.00 33.66 3.85
4557 4991 3.455910 CACAACCAGAATAGAGGATCCCA 59.544 47.826 8.55 0.00 33.66 4.37
4558 4992 4.080356 CACAACCAGAATAGAGGATCCCAA 60.080 45.833 8.55 0.00 33.66 4.12
4559 4993 4.540099 ACAACCAGAATAGAGGATCCCAAA 59.460 41.667 8.55 0.00 33.66 3.28
4560 4994 5.194537 ACAACCAGAATAGAGGATCCCAAAT 59.805 40.000 8.55 0.00 33.66 2.32
4561 4995 6.389869 ACAACCAGAATAGAGGATCCCAAATA 59.610 38.462 8.55 0.00 33.66 1.40
4562 4996 7.091993 ACAACCAGAATAGAGGATCCCAAATAA 60.092 37.037 8.55 0.00 33.66 1.40
4563 4997 7.654287 ACCAGAATAGAGGATCCCAAATAAT 57.346 36.000 8.55 0.00 33.66 1.28
4564 4998 8.061890 ACCAGAATAGAGGATCCCAAATAATT 57.938 34.615 8.55 0.14 33.66 1.40
4565 4999 7.946776 ACCAGAATAGAGGATCCCAAATAATTG 59.053 37.037 8.55 0.00 33.66 2.32
4566 5000 7.094032 CCAGAATAGAGGATCCCAAATAATTGC 60.094 40.741 8.55 0.00 35.10 3.56
4567 5001 6.950619 AGAATAGAGGATCCCAAATAATTGCC 59.049 38.462 8.55 0.00 35.10 4.52
4568 5002 4.821532 AGAGGATCCCAAATAATTGCCT 57.178 40.909 8.55 0.00 35.10 4.75
4569 5003 5.148225 AGAGGATCCCAAATAATTGCCTT 57.852 39.130 8.55 0.00 35.10 4.35
4570 5004 5.143369 AGAGGATCCCAAATAATTGCCTTC 58.857 41.667 8.55 0.00 35.10 3.46
4571 5005 4.226384 AGGATCCCAAATAATTGCCTTCC 58.774 43.478 8.55 0.00 35.10 3.46
4572 5006 3.324846 GGATCCCAAATAATTGCCTTCCC 59.675 47.826 0.00 0.00 35.10 3.97
4573 5007 2.383855 TCCCAAATAATTGCCTTCCCG 58.616 47.619 0.00 0.00 35.10 5.14
4574 5008 2.024846 TCCCAAATAATTGCCTTCCCGA 60.025 45.455 0.00 0.00 35.10 5.14
4575 5009 2.965147 CCCAAATAATTGCCTTCCCGAT 59.035 45.455 0.00 0.00 35.10 4.18
4576 5010 3.005791 CCCAAATAATTGCCTTCCCGATC 59.994 47.826 0.00 0.00 35.10 3.69
4577 5011 3.636300 CCAAATAATTGCCTTCCCGATCA 59.364 43.478 0.00 0.00 35.10 2.92
4578 5012 4.499696 CCAAATAATTGCCTTCCCGATCAC 60.500 45.833 0.00 0.00 35.10 3.06
4579 5013 1.948104 TAATTGCCTTCCCGATCACG 58.052 50.000 0.00 0.00 39.43 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 49 1.130955 CCAATGTGCACAAAGTTCGC 58.869 50.000 25.72 0.00 0.00 4.70
81 83 5.596845 GACTAGATTCCAGTTCCACATCTC 58.403 45.833 0.00 0.00 0.00 2.75
82 84 4.098654 CGACTAGATTCCAGTTCCACATCT 59.901 45.833 0.00 0.00 0.00 2.90
83 85 4.142138 ACGACTAGATTCCAGTTCCACATC 60.142 45.833 0.00 0.00 0.00 3.06
84 86 3.769844 ACGACTAGATTCCAGTTCCACAT 59.230 43.478 0.00 0.00 0.00 3.21
85 87 3.162666 ACGACTAGATTCCAGTTCCACA 58.837 45.455 0.00 0.00 0.00 4.17
87 89 4.884668 AAACGACTAGATTCCAGTTCCA 57.115 40.909 0.00 0.00 0.00 3.53
171 177 3.197766 TGCTAGTGCCATATAGGGTATGC 59.802 47.826 5.15 7.55 38.71 3.14
208 214 1.062002 CTACGCGTTCATGCCGAAATT 59.938 47.619 20.78 0.00 34.69 1.82
234 240 8.475639 AGTAGATGGTGAACTTACAAATCGTAT 58.524 33.333 0.00 0.00 0.00 3.06
241 247 8.640063 TGTACTAGTAGATGGTGAACTTACAA 57.360 34.615 1.87 0.00 0.00 2.41
243 249 8.189460 CCTTGTACTAGTAGATGGTGAACTTAC 58.811 40.741 18.83 0.86 0.00 2.34
244 250 7.892241 ACCTTGTACTAGTAGATGGTGAACTTA 59.108 37.037 27.24 0.05 36.14 2.24
245 251 6.724905 ACCTTGTACTAGTAGATGGTGAACTT 59.275 38.462 27.24 9.63 36.14 2.66
248 254 6.377429 CAGACCTTGTACTAGTAGATGGTGAA 59.623 42.308 30.80 4.87 37.12 3.18
255 261 5.415077 GCAGTTCAGACCTTGTACTAGTAGA 59.585 44.000 1.87 0.00 35.50 2.59
256 262 5.183331 TGCAGTTCAGACCTTGTACTAGTAG 59.817 44.000 1.87 0.00 35.50 2.57
257 263 5.074804 TGCAGTTCAGACCTTGTACTAGTA 58.925 41.667 0.00 0.00 35.50 1.82
260 266 6.791867 ATATGCAGTTCAGACCTTGTACTA 57.208 37.500 0.00 0.00 35.50 1.82
335 353 2.969262 AGCTCTAGGGAAGGATAGTTGC 59.031 50.000 0.00 0.00 0.00 4.17
399 438 0.824595 TCGCGGCAGCCTATAGGTTA 60.825 55.000 20.10 0.00 41.18 2.85
421 460 4.556104 CGTTTCGAGTAGTGGTTCTCTTCA 60.556 45.833 0.00 0.00 0.00 3.02
865 906 2.409870 GCCCATGGAACGGAAGCAG 61.410 63.158 15.22 0.00 0.00 4.24
946 991 3.467226 TTTAGGGGAGGCGCCGAG 61.467 66.667 23.20 0.00 41.60 4.63
947 992 3.777910 GTTTAGGGGAGGCGCCGA 61.778 66.667 23.20 0.00 41.60 5.54
948 993 4.851179 GGTTTAGGGGAGGCGCCG 62.851 72.222 23.20 0.00 41.60 6.46
949 994 3.402095 GAGGTTTAGGGGAGGCGCC 62.402 68.421 21.89 21.89 36.67 6.53
950 995 2.189784 GAGGTTTAGGGGAGGCGC 59.810 66.667 0.00 0.00 0.00 6.53
951 996 2.908796 GGAGGTTTAGGGGAGGCG 59.091 66.667 0.00 0.00 0.00 5.52
952 997 2.908796 CGGAGGTTTAGGGGAGGC 59.091 66.667 0.00 0.00 0.00 4.70
953 998 2.908796 GCGGAGGTTTAGGGGAGG 59.091 66.667 0.00 0.00 0.00 4.30
1139 1190 2.468301 TGGGAGAATCTGAGAGAGGG 57.532 55.000 0.00 0.00 33.73 4.30
1142 1193 3.431346 CGCAAATGGGAGAATCTGAGAGA 60.431 47.826 0.00 0.00 33.73 3.10
1144 1210 2.420547 CCGCAAATGGGAGAATCTGAGA 60.421 50.000 0.00 0.00 33.73 3.27
1429 1497 2.710377 ACAAGCAACATCGCAATCCTA 58.290 42.857 0.00 0.00 0.00 2.94
1670 1739 7.986085 ATTGTACAAGCTGAGTAATTTGACT 57.014 32.000 14.65 0.00 0.00 3.41
1671 1740 9.463443 AAAATTGTACAAGCTGAGTAATTTGAC 57.537 29.630 14.65 0.07 0.00 3.18
1711 1780 9.928236 CAATTAAAAGCAAGCTTCTAGATCTAC 57.072 33.333 7.88 0.00 34.84 2.59
1743 1812 6.895204 AGCCCAGGTATTTTATAAAGAAGCAA 59.105 34.615 11.38 0.00 0.00 3.91
1820 1892 9.660180 GAAATCTCTAAAGTAAGTCAATCAGGT 57.340 33.333 0.00 0.00 0.00 4.00
1900 2291 4.633565 GCAAAGTAATCCTCTCAACTCCAG 59.366 45.833 0.00 0.00 0.00 3.86
2033 2424 6.038271 CAGGCAGTTTACCTAATATTGACCAC 59.962 42.308 0.00 0.00 35.10 4.16
2151 2542 4.418392 CAACAAGTTGATATCAAGCAGCC 58.582 43.478 18.47 6.64 42.93 4.85
2239 2630 6.904626 ACATATAGGAAATGGGAGGATATGC 58.095 40.000 0.00 0.00 31.78 3.14
2263 2654 7.147915 GCAATTGGAGTATGATAACAGGGAAAA 60.148 37.037 7.72 0.00 0.00 2.29
2295 2686 6.320418 TCTTTTACCTCAAAGGACTTTTGGTC 59.680 38.462 17.17 0.00 45.05 4.02
2302 2693 7.898014 ATTGTTTCTTTTACCTCAAAGGACT 57.102 32.000 0.00 0.00 37.67 3.85
2311 2702 8.907222 AATCATGCAAATTGTTTCTTTTACCT 57.093 26.923 0.00 0.00 0.00 3.08
2407 2811 9.737427 CAGACAGTCGAATATAGTTTAGAATGT 57.263 33.333 6.92 6.92 40.51 2.71
2431 2835 8.915654 GTTTCATGCTTAACTATTGGAAAACAG 58.084 33.333 0.00 0.00 0.00 3.16
2784 3189 4.263331 GGGGAAAGATTGGACAACAGACTA 60.263 45.833 0.00 0.00 0.00 2.59
3478 3883 3.689161 TGCCACGAAATAGAACATTCCTG 59.311 43.478 0.00 0.00 0.00 3.86
3517 3922 0.391661 AAGATGCGATTCCACTGCGT 60.392 50.000 0.00 0.00 0.00 5.24
3565 3970 4.830046 TCCATCTACAAGAGCTGATCTACC 59.170 45.833 0.00 0.00 37.23 3.18
3588 3993 3.609853 TCATAAATGGCTTCTCTGCGTT 58.390 40.909 0.00 0.00 0.00 4.84
3590 3995 4.621068 TTTCATAAATGGCTTCTCTGCG 57.379 40.909 0.00 0.00 0.00 5.18
3671 4083 2.941720 GTCTGGATGAGATGAACAAGGC 59.058 50.000 0.00 0.00 31.63 4.35
3695 4107 2.551270 GAGCACGCAACTCCAACG 59.449 61.111 0.00 0.00 0.00 4.10
3772 4184 4.096532 TCAACACGAGCAACAAAACCAATA 59.903 37.500 0.00 0.00 0.00 1.90
3773 4185 3.119316 TCAACACGAGCAACAAAACCAAT 60.119 39.130 0.00 0.00 0.00 3.16
3832 4245 3.282885 CCTTTCACCATTCTCCTTAGCC 58.717 50.000 0.00 0.00 0.00 3.93
3837 4250 7.256296 CCAAAATTAACCTTTCACCATTCTCCT 60.256 37.037 0.00 0.00 0.00 3.69
3844 4257 4.742138 GCTGCCAAAATTAACCTTTCACCA 60.742 41.667 0.00 0.00 0.00 4.17
3895 4329 3.181169 AACAGGCTGCGTTGCGAAC 62.181 57.895 15.89 0.00 0.00 3.95
3898 4332 2.935122 AAACAACAGGCTGCGTTGCG 62.935 55.000 19.86 4.25 46.14 4.85
3903 4337 0.317269 CACTCAAACAACAGGCTGCG 60.317 55.000 15.89 8.81 0.00 5.18
3978 4412 1.474330 GACCGGCCATCTTCCAAATT 58.526 50.000 0.00 0.00 0.00 1.82
4003 4437 9.683069 CAATACAATGGATTAACAAAGCTATCC 57.317 33.333 4.26 4.26 37.62 2.59
4030 4464 3.431673 TGGGTGATCAACTTGCATGTA 57.568 42.857 11.29 0.00 0.00 2.29
4031 4465 2.291209 TGGGTGATCAACTTGCATGT 57.709 45.000 11.29 0.00 0.00 3.21
4032 4466 2.559668 ACTTGGGTGATCAACTTGCATG 59.440 45.455 11.29 5.39 0.00 4.06
4033 4467 2.880443 ACTTGGGTGATCAACTTGCAT 58.120 42.857 11.29 0.00 0.00 3.96
4034 4468 2.363306 ACTTGGGTGATCAACTTGCA 57.637 45.000 11.29 0.00 0.00 4.08
4035 4469 3.733443 AAACTTGGGTGATCAACTTGC 57.267 42.857 11.29 0.00 0.00 4.01
4036 4470 9.927668 ATATTTAAAACTTGGGTGATCAACTTG 57.072 29.630 11.29 3.82 0.00 3.16
4128 4562 3.153919 GGAACACATTACAAGCCCTGAA 58.846 45.455 0.00 0.00 0.00 3.02
4131 4565 1.427368 TGGGAACACATTACAAGCCCT 59.573 47.619 0.00 0.00 35.15 5.19
4136 4570 4.431416 ACTGACTGGGAACACATTACAA 57.569 40.909 0.00 0.00 35.60 2.41
4165 4599 5.530176 AAGCCTAGTTATCCCTCCAAAAA 57.470 39.130 0.00 0.00 0.00 1.94
4166 4600 5.530176 AAAGCCTAGTTATCCCTCCAAAA 57.470 39.130 0.00 0.00 0.00 2.44
4167 4601 6.841781 ATAAAGCCTAGTTATCCCTCCAAA 57.158 37.500 0.00 0.00 0.00 3.28
4168 4602 6.601332 CAATAAAGCCTAGTTATCCCTCCAA 58.399 40.000 0.00 0.00 0.00 3.53
4169 4603 5.456186 GCAATAAAGCCTAGTTATCCCTCCA 60.456 44.000 0.00 0.00 0.00 3.86
4170 4604 5.004448 GCAATAAAGCCTAGTTATCCCTCC 58.996 45.833 0.00 0.00 0.00 4.30
4171 4605 5.621193 TGCAATAAAGCCTAGTTATCCCTC 58.379 41.667 0.00 0.00 0.00 4.30
4172 4606 5.646692 TGCAATAAAGCCTAGTTATCCCT 57.353 39.130 0.00 0.00 0.00 4.20
4173 4607 5.183904 CCATGCAATAAAGCCTAGTTATCCC 59.816 44.000 0.00 0.00 0.00 3.85
4174 4608 5.770162 ACCATGCAATAAAGCCTAGTTATCC 59.230 40.000 0.00 0.00 0.00 2.59
4175 4609 6.884280 ACCATGCAATAAAGCCTAGTTATC 57.116 37.500 0.00 0.00 0.00 1.75
4176 4610 8.217799 TCTAACCATGCAATAAAGCCTAGTTAT 58.782 33.333 0.00 0.00 0.00 1.89
4177 4611 7.570132 TCTAACCATGCAATAAAGCCTAGTTA 58.430 34.615 0.00 0.00 0.00 2.24
4178 4612 6.423182 TCTAACCATGCAATAAAGCCTAGTT 58.577 36.000 0.00 0.00 0.00 2.24
4179 4613 6.001449 TCTAACCATGCAATAAAGCCTAGT 57.999 37.500 0.00 0.00 0.00 2.57
4180 4614 6.942532 TTCTAACCATGCAATAAAGCCTAG 57.057 37.500 0.00 0.00 0.00 3.02
4181 4615 6.833416 ACATTCTAACCATGCAATAAAGCCTA 59.167 34.615 0.00 0.00 0.00 3.93
4182 4616 5.658190 ACATTCTAACCATGCAATAAAGCCT 59.342 36.000 0.00 0.00 0.00 4.58
4183 4617 5.906073 ACATTCTAACCATGCAATAAAGCC 58.094 37.500 0.00 0.00 0.00 4.35
4184 4618 7.832503 AAACATTCTAACCATGCAATAAAGC 57.167 32.000 0.00 0.00 0.00 3.51
4185 4619 9.853555 TGTAAACATTCTAACCATGCAATAAAG 57.146 29.630 0.00 0.00 0.00 1.85
4186 4620 9.853555 CTGTAAACATTCTAACCATGCAATAAA 57.146 29.630 0.00 0.00 0.00 1.40
4187 4621 8.465999 CCTGTAAACATTCTAACCATGCAATAA 58.534 33.333 0.00 0.00 0.00 1.40
4188 4622 7.068103 CCCTGTAAACATTCTAACCATGCAATA 59.932 37.037 0.00 0.00 0.00 1.90
4189 4623 6.127366 CCCTGTAAACATTCTAACCATGCAAT 60.127 38.462 0.00 0.00 0.00 3.56
4190 4624 5.184864 CCCTGTAAACATTCTAACCATGCAA 59.815 40.000 0.00 0.00 0.00 4.08
4191 4625 4.704540 CCCTGTAAACATTCTAACCATGCA 59.295 41.667 0.00 0.00 0.00 3.96
4192 4626 4.947388 TCCCTGTAAACATTCTAACCATGC 59.053 41.667 0.00 0.00 0.00 4.06
4193 4627 8.746052 TTATCCCTGTAAACATTCTAACCATG 57.254 34.615 0.00 0.00 0.00 3.66
4206 4640 9.685276 CCATGATGCTAATATTATCCCTGTAAA 57.315 33.333 0.00 0.00 0.00 2.01
4207 4641 8.274322 CCCATGATGCTAATATTATCCCTGTAA 58.726 37.037 0.00 0.00 0.00 2.41
4208 4642 7.147320 CCCCATGATGCTAATATTATCCCTGTA 60.147 40.741 0.00 0.00 0.00 2.74
4209 4643 6.354213 CCCCATGATGCTAATATTATCCCTGT 60.354 42.308 0.00 0.00 0.00 4.00
4210 4644 6.066690 CCCCATGATGCTAATATTATCCCTG 58.933 44.000 0.00 0.00 0.00 4.45
4211 4645 5.978752 TCCCCATGATGCTAATATTATCCCT 59.021 40.000 0.00 0.00 0.00 4.20
4212 4646 6.266131 TCCCCATGATGCTAATATTATCCC 57.734 41.667 0.00 0.00 0.00 3.85
4213 4647 7.756395 CATCCCCATGATGCTAATATTATCC 57.244 40.000 0.00 0.00 44.16 2.59
4232 4666 4.475016 AGACATATATGGTTAGGGCATCCC 59.525 45.833 16.96 0.00 45.90 3.85
4233 4667 5.396884 GGAGACATATATGGTTAGGGCATCC 60.397 48.000 16.96 6.64 0.00 3.51
4234 4668 5.396884 GGGAGACATATATGGTTAGGGCATC 60.397 48.000 16.96 2.37 0.00 3.91
4235 4669 4.475016 GGGAGACATATATGGTTAGGGCAT 59.525 45.833 16.96 0.00 0.00 4.40
4236 4670 3.844211 GGGAGACATATATGGTTAGGGCA 59.156 47.826 16.96 0.00 0.00 5.36
4237 4671 3.200165 GGGGAGACATATATGGTTAGGGC 59.800 52.174 16.96 0.00 0.00 5.19
4238 4672 4.435137 TGGGGAGACATATATGGTTAGGG 58.565 47.826 16.96 0.00 0.00 3.53
4239 4673 4.471386 CCTGGGGAGACATATATGGTTAGG 59.529 50.000 16.96 9.85 0.00 2.69
4240 4674 4.471386 CCCTGGGGAGACATATATGGTTAG 59.529 50.000 16.96 5.37 37.50 2.34
4241 4675 4.435137 CCCTGGGGAGACATATATGGTTA 58.565 47.826 16.96 0.00 37.50 2.85
4242 4676 3.260205 CCCTGGGGAGACATATATGGTT 58.740 50.000 16.96 4.44 37.50 3.67
4243 4677 2.921221 CCCTGGGGAGACATATATGGT 58.079 52.381 16.96 3.71 37.50 3.55
4256 4690 2.167037 TGTTTCCCTTCCCCTGGGG 61.167 63.158 26.87 26.87 44.67 4.96
4257 4691 1.076727 GTGTTTCCCTTCCCCTGGG 59.923 63.158 5.50 5.50 45.90 4.45
4258 4692 1.076727 GGTGTTTCCCTTCCCCTGG 59.923 63.158 0.00 0.00 0.00 4.45
4259 4693 0.409484 ATGGTGTTTCCCTTCCCCTG 59.591 55.000 0.00 0.00 34.77 4.45
4260 4694 1.639108 GTATGGTGTTTCCCTTCCCCT 59.361 52.381 0.00 0.00 34.77 4.79
4261 4695 1.341679 GGTATGGTGTTTCCCTTCCCC 60.342 57.143 0.00 0.00 34.77 4.81
4262 4696 1.639108 AGGTATGGTGTTTCCCTTCCC 59.361 52.381 0.00 0.00 34.77 3.97
4263 4697 3.684697 GCTAGGTATGGTGTTTCCCTTCC 60.685 52.174 0.00 0.00 34.77 3.46
4264 4698 3.200165 AGCTAGGTATGGTGTTTCCCTTC 59.800 47.826 0.00 0.00 34.77 3.46
4265 4699 3.190439 AGCTAGGTATGGTGTTTCCCTT 58.810 45.455 0.00 0.00 34.77 3.95
4266 4700 2.846950 AGCTAGGTATGGTGTTTCCCT 58.153 47.619 0.00 0.00 34.77 4.20
4267 4701 4.449131 GTTAGCTAGGTATGGTGTTTCCC 58.551 47.826 1.80 0.00 34.77 3.97
4268 4702 4.163649 AGGTTAGCTAGGTATGGTGTTTCC 59.836 45.833 1.80 0.00 0.00 3.13
4269 4703 5.354842 AGGTTAGCTAGGTATGGTGTTTC 57.645 43.478 1.80 0.00 0.00 2.78
4270 4704 6.614087 TCATAGGTTAGCTAGGTATGGTGTTT 59.386 38.462 1.80 0.00 0.00 2.83
4271 4705 6.141083 TCATAGGTTAGCTAGGTATGGTGTT 58.859 40.000 1.80 0.00 0.00 3.32
4272 4706 5.712752 TCATAGGTTAGCTAGGTATGGTGT 58.287 41.667 1.80 0.00 0.00 4.16
4273 4707 5.336849 GCTCATAGGTTAGCTAGGTATGGTG 60.337 48.000 1.80 10.74 35.80 4.17
4274 4708 4.773149 GCTCATAGGTTAGCTAGGTATGGT 59.227 45.833 1.80 0.00 35.80 3.55
4275 4709 5.331876 GCTCATAGGTTAGCTAGGTATGG 57.668 47.826 1.80 9.28 35.80 2.74
4284 4718 7.538575 TCAAATTTTGAAGCTCATAGGTTAGC 58.461 34.615 9.36 0.00 35.86 3.09
4298 4732 8.839310 TTGAACCAAGAACTTCAAATTTTGAA 57.161 26.923 20.33 20.33 46.68 2.69
4299 4733 8.839310 TTTGAACCAAGAACTTCAAATTTTGA 57.161 26.923 7.74 7.74 40.04 2.69
4300 4734 9.890352 TTTTTGAACCAAGAACTTCAAATTTTG 57.110 25.926 2.59 2.59 42.87 2.44
4301 4735 9.891828 GTTTTTGAACCAAGAACTTCAAATTTT 57.108 25.926 6.43 0.00 42.87 1.82
4302 4736 9.061435 TGTTTTTGAACCAAGAACTTCAAATTT 57.939 25.926 12.25 0.00 42.87 1.82
4303 4737 8.614469 TGTTTTTGAACCAAGAACTTCAAATT 57.386 26.923 12.25 0.00 42.87 1.82
4304 4738 8.614469 TTGTTTTTGAACCAAGAACTTCAAAT 57.386 26.923 12.25 0.00 42.87 2.32
4305 4739 8.438676 TTTGTTTTTGAACCAAGAACTTCAAA 57.561 26.923 12.25 2.23 42.11 2.69
4306 4740 8.438676 TTTTGTTTTTGAACCAAGAACTTCAA 57.561 26.923 12.25 0.00 38.63 2.69
4307 4741 8.614469 ATTTTGTTTTTGAACCAAGAACTTCA 57.386 26.923 12.25 0.00 38.63 3.02
4310 4744 9.495572 TGTAATTTTGTTTTTGAACCAAGAACT 57.504 25.926 12.25 0.00 38.63 3.01
4313 4747 8.447053 GCTTGTAATTTTGTTTTTGAACCAAGA 58.553 29.630 0.00 0.00 0.00 3.02
4314 4748 7.696035 GGCTTGTAATTTTGTTTTTGAACCAAG 59.304 33.333 0.00 0.00 0.00 3.61
4315 4749 7.174946 TGGCTTGTAATTTTGTTTTTGAACCAA 59.825 29.630 0.00 0.00 0.00 3.67
4316 4750 6.655003 TGGCTTGTAATTTTGTTTTTGAACCA 59.345 30.769 0.00 0.00 0.00 3.67
4317 4751 7.078011 TGGCTTGTAATTTTGTTTTTGAACC 57.922 32.000 0.00 0.00 0.00 3.62
4318 4752 8.394121 TCATGGCTTGTAATTTTGTTTTTGAAC 58.606 29.630 0.00 0.00 0.00 3.18
4319 4753 8.498054 TCATGGCTTGTAATTTTGTTTTTGAA 57.502 26.923 0.00 0.00 0.00 2.69
4320 4754 8.498054 TTCATGGCTTGTAATTTTGTTTTTGA 57.502 26.923 0.00 0.00 0.00 2.69
4321 4755 9.224058 CTTTCATGGCTTGTAATTTTGTTTTTG 57.776 29.630 0.00 0.00 0.00 2.44
4322 4756 9.171877 TCTTTCATGGCTTGTAATTTTGTTTTT 57.828 25.926 0.00 0.00 0.00 1.94
4323 4757 8.729805 TCTTTCATGGCTTGTAATTTTGTTTT 57.270 26.923 0.00 0.00 0.00 2.43
4324 4758 8.611757 GTTCTTTCATGGCTTGTAATTTTGTTT 58.388 29.630 0.00 0.00 0.00 2.83
4325 4759 7.986889 AGTTCTTTCATGGCTTGTAATTTTGTT 59.013 29.630 0.00 0.00 0.00 2.83
4326 4760 7.500141 AGTTCTTTCATGGCTTGTAATTTTGT 58.500 30.769 0.00 0.00 0.00 2.83
4327 4761 7.951530 AGTTCTTTCATGGCTTGTAATTTTG 57.048 32.000 0.00 0.00 0.00 2.44
4328 4762 8.860088 ACTAGTTCTTTCATGGCTTGTAATTTT 58.140 29.630 0.00 0.00 0.00 1.82
4329 4763 8.409358 ACTAGTTCTTTCATGGCTTGTAATTT 57.591 30.769 0.00 0.00 0.00 1.82
4330 4764 9.167311 CTACTAGTTCTTTCATGGCTTGTAATT 57.833 33.333 0.00 0.00 0.00 1.40
4331 4765 8.322091 ACTACTAGTTCTTTCATGGCTTGTAAT 58.678 33.333 0.00 0.00 0.00 1.89
4332 4766 7.676947 ACTACTAGTTCTTTCATGGCTTGTAA 58.323 34.615 0.00 0.00 0.00 2.41
4333 4767 7.241042 ACTACTAGTTCTTTCATGGCTTGTA 57.759 36.000 0.00 0.00 0.00 2.41
4334 4768 6.115448 ACTACTAGTTCTTTCATGGCTTGT 57.885 37.500 0.00 0.00 0.00 3.16
4335 4769 7.389053 AGAAACTACTAGTTCTTTCATGGCTTG 59.611 37.037 19.50 0.00 37.47 4.01
4336 4770 7.389053 CAGAAACTACTAGTTCTTTCATGGCTT 59.611 37.037 19.50 3.59 37.47 4.35
4337 4771 6.876257 CAGAAACTACTAGTTCTTTCATGGCT 59.124 38.462 19.50 4.08 37.47 4.75
4338 4772 6.651225 ACAGAAACTACTAGTTCTTTCATGGC 59.349 38.462 19.50 2.25 37.47 4.40
4339 4773 7.872993 TGACAGAAACTACTAGTTCTTTCATGG 59.127 37.037 19.50 13.56 37.47 3.66
4340 4774 8.704234 GTGACAGAAACTACTAGTTCTTTCATG 58.296 37.037 19.50 16.74 37.47 3.07
4341 4775 7.873505 GGTGACAGAAACTACTAGTTCTTTCAT 59.126 37.037 19.50 11.55 37.47 2.57
4342 4776 7.069578 AGGTGACAGAAACTACTAGTTCTTTCA 59.930 37.037 19.50 13.86 37.47 2.69
4343 4777 7.435305 AGGTGACAGAAACTACTAGTTCTTTC 58.565 38.462 0.00 8.60 37.47 2.62
4344 4778 7.288158 AGAGGTGACAGAAACTACTAGTTCTTT 59.712 37.037 0.00 0.00 37.47 2.52
4345 4779 6.778559 AGAGGTGACAGAAACTACTAGTTCTT 59.221 38.462 0.00 0.00 37.47 2.52
4346 4780 6.308566 AGAGGTGACAGAAACTACTAGTTCT 58.691 40.000 0.00 0.00 37.47 3.01
4347 4781 6.431852 AGAGAGGTGACAGAAACTACTAGTTC 59.568 42.308 0.00 0.00 37.47 3.01
4348 4782 6.308566 AGAGAGGTGACAGAAACTACTAGTT 58.691 40.000 0.00 0.00 40.80 2.24
4349 4783 5.883180 AGAGAGGTGACAGAAACTACTAGT 58.117 41.667 0.00 0.00 0.00 2.57
4350 4784 7.925043 TTAGAGAGGTGACAGAAACTACTAG 57.075 40.000 0.00 0.00 0.00 2.57
4351 4785 8.880991 AATTAGAGAGGTGACAGAAACTACTA 57.119 34.615 0.00 0.00 0.00 1.82
4352 4786 7.784470 AATTAGAGAGGTGACAGAAACTACT 57.216 36.000 0.00 0.00 0.00 2.57
4353 4787 9.522804 CATAATTAGAGAGGTGACAGAAACTAC 57.477 37.037 0.00 0.00 0.00 2.73
4354 4788 8.198109 GCATAATTAGAGAGGTGACAGAAACTA 58.802 37.037 0.00 0.00 0.00 2.24
4355 4789 7.044798 GCATAATTAGAGAGGTGACAGAAACT 58.955 38.462 0.00 0.00 0.00 2.66
4356 4790 7.044798 AGCATAATTAGAGAGGTGACAGAAAC 58.955 38.462 0.00 0.00 0.00 2.78
4357 4791 7.187824 AGCATAATTAGAGAGGTGACAGAAA 57.812 36.000 0.00 0.00 0.00 2.52
4358 4792 6.798427 AGCATAATTAGAGAGGTGACAGAA 57.202 37.500 0.00 0.00 0.00 3.02
4359 4793 6.577103 CAAGCATAATTAGAGAGGTGACAGA 58.423 40.000 0.00 0.00 0.00 3.41
4360 4794 5.236047 GCAAGCATAATTAGAGAGGTGACAG 59.764 44.000 0.00 0.00 0.00 3.51
4361 4795 5.118990 GCAAGCATAATTAGAGAGGTGACA 58.881 41.667 0.00 0.00 0.00 3.58
4362 4796 5.118990 TGCAAGCATAATTAGAGAGGTGAC 58.881 41.667 0.00 0.00 0.00 3.67
4363 4797 5.357742 TGCAAGCATAATTAGAGAGGTGA 57.642 39.130 0.00 0.00 0.00 4.02
4364 4798 7.734924 TTATGCAAGCATAATTAGAGAGGTG 57.265 36.000 20.25 0.00 42.05 4.00
4383 4817 6.754782 GCAAGGAGTTGGAGGCAATTATGC 62.755 50.000 0.00 0.00 41.93 3.14
4384 4818 3.181483 GCAAGGAGTTGGAGGCAATTATG 60.181 47.826 0.00 0.00 33.87 1.90
4385 4819 3.026694 GCAAGGAGTTGGAGGCAATTAT 58.973 45.455 0.00 0.00 33.87 1.28
4386 4820 2.041620 AGCAAGGAGTTGGAGGCAATTA 59.958 45.455 0.00 0.00 33.87 1.40
4387 4821 1.203100 AGCAAGGAGTTGGAGGCAATT 60.203 47.619 0.00 0.00 33.87 2.32
4388 4822 0.407139 AGCAAGGAGTTGGAGGCAAT 59.593 50.000 0.00 0.00 33.87 3.56
4389 4823 0.185901 AAGCAAGGAGTTGGAGGCAA 59.814 50.000 0.00 0.00 33.87 4.52
4390 4824 0.538057 CAAGCAAGGAGTTGGAGGCA 60.538 55.000 0.00 0.00 33.87 4.75
4391 4825 0.250901 TCAAGCAAGGAGTTGGAGGC 60.251 55.000 0.00 0.00 33.87 4.70
4392 4826 2.089980 CATCAAGCAAGGAGTTGGAGG 58.910 52.381 0.00 0.00 33.87 4.30
4393 4827 2.486982 CACATCAAGCAAGGAGTTGGAG 59.513 50.000 0.00 0.00 33.87 3.86
4394 4828 2.158623 ACACATCAAGCAAGGAGTTGGA 60.159 45.455 0.00 0.00 33.87 3.53
4395 4829 2.233271 ACACATCAAGCAAGGAGTTGG 58.767 47.619 0.00 0.00 33.87 3.77
4396 4830 4.756642 TCTTACACATCAAGCAAGGAGTTG 59.243 41.667 0.00 0.00 36.67 3.16
4397 4831 4.973168 TCTTACACATCAAGCAAGGAGTT 58.027 39.130 0.00 0.00 0.00 3.01
4398 4832 4.623932 TCTTACACATCAAGCAAGGAGT 57.376 40.909 0.00 0.00 0.00 3.85
4399 4833 5.064452 GTCATCTTACACATCAAGCAAGGAG 59.936 44.000 0.00 0.00 0.00 3.69
4400 4834 4.937620 GTCATCTTACACATCAAGCAAGGA 59.062 41.667 0.00 0.00 0.00 3.36
4401 4835 4.940046 AGTCATCTTACACATCAAGCAAGG 59.060 41.667 0.00 0.00 0.00 3.61
4402 4836 6.072838 ACAAGTCATCTTACACATCAAGCAAG 60.073 38.462 0.00 0.00 32.07 4.01
4403 4837 5.764686 ACAAGTCATCTTACACATCAAGCAA 59.235 36.000 0.00 0.00 32.07 3.91
4404 4838 5.308014 ACAAGTCATCTTACACATCAAGCA 58.692 37.500 0.00 0.00 32.07 3.91
4405 4839 5.869753 ACAAGTCATCTTACACATCAAGC 57.130 39.130 0.00 0.00 32.07 4.01
4406 4840 8.773645 TGTAAACAAGTCATCTTACACATCAAG 58.226 33.333 0.00 0.00 31.14 3.02
4407 4841 8.669946 TGTAAACAAGTCATCTTACACATCAA 57.330 30.769 0.00 0.00 31.14 2.57
4408 4842 8.669946 TTGTAAACAAGTCATCTTACACATCA 57.330 30.769 0.00 0.00 34.78 3.07
4409 4843 9.760660 GATTGTAAACAAGTCATCTTACACATC 57.239 33.333 1.62 0.00 39.47 3.06
4410 4844 9.507329 AGATTGTAAACAAGTCATCTTACACAT 57.493 29.630 1.62 0.00 39.47 3.21
4411 4845 8.773645 CAGATTGTAAACAAGTCATCTTACACA 58.226 33.333 1.62 0.00 39.47 3.72
4412 4846 8.988934 TCAGATTGTAAACAAGTCATCTTACAC 58.011 33.333 1.62 0.00 39.47 2.90
4413 4847 8.988934 GTCAGATTGTAAACAAGTCATCTTACA 58.011 33.333 1.62 0.00 39.47 2.41
4414 4848 8.162880 CGTCAGATTGTAAACAAGTCATCTTAC 58.837 37.037 1.62 1.37 39.47 2.34
4415 4849 7.148639 GCGTCAGATTGTAAACAAGTCATCTTA 60.149 37.037 1.62 0.00 39.47 2.10
4416 4850 6.347725 GCGTCAGATTGTAAACAAGTCATCTT 60.348 38.462 1.62 0.00 39.47 2.40
4417 4851 5.120830 GCGTCAGATTGTAAACAAGTCATCT 59.879 40.000 1.62 0.00 39.47 2.90
4418 4852 5.316770 GCGTCAGATTGTAAACAAGTCATC 58.683 41.667 1.62 0.00 39.47 2.92
4419 4853 4.154195 GGCGTCAGATTGTAAACAAGTCAT 59.846 41.667 1.62 0.00 39.47 3.06
4420 4854 3.496884 GGCGTCAGATTGTAAACAAGTCA 59.503 43.478 1.62 0.00 39.47 3.41
4421 4855 3.496884 TGGCGTCAGATTGTAAACAAGTC 59.503 43.478 1.62 0.68 39.47 3.01
4422 4856 3.250040 GTGGCGTCAGATTGTAAACAAGT 59.750 43.478 0.00 0.00 39.47 3.16
4423 4857 3.364964 GGTGGCGTCAGATTGTAAACAAG 60.365 47.826 0.00 0.00 39.47 3.16
4424 4858 2.550606 GGTGGCGTCAGATTGTAAACAA 59.449 45.455 0.00 0.00 40.51 2.83
4425 4859 2.147958 GGTGGCGTCAGATTGTAAACA 58.852 47.619 0.00 0.00 0.00 2.83
4426 4860 2.159627 CAGGTGGCGTCAGATTGTAAAC 59.840 50.000 0.00 0.00 0.00 2.01
4427 4861 2.037902 TCAGGTGGCGTCAGATTGTAAA 59.962 45.455 0.00 0.00 0.00 2.01
4428 4862 1.621317 TCAGGTGGCGTCAGATTGTAA 59.379 47.619 0.00 0.00 0.00 2.41
4429 4863 1.262417 TCAGGTGGCGTCAGATTGTA 58.738 50.000 0.00 0.00 0.00 2.41
4430 4864 0.396435 TTCAGGTGGCGTCAGATTGT 59.604 50.000 0.00 0.00 0.00 2.71
4431 4865 1.742761 ATTCAGGTGGCGTCAGATTG 58.257 50.000 0.00 0.00 0.00 2.67
4432 4866 2.501723 AGTATTCAGGTGGCGTCAGATT 59.498 45.455 0.00 0.00 0.00 2.40
4433 4867 2.111384 AGTATTCAGGTGGCGTCAGAT 58.889 47.619 0.00 0.00 0.00 2.90
4434 4868 1.557099 AGTATTCAGGTGGCGTCAGA 58.443 50.000 0.00 0.00 0.00 3.27
4435 4869 2.386661 AAGTATTCAGGTGGCGTCAG 57.613 50.000 0.00 0.00 0.00 3.51
4436 4870 2.422597 CAAAGTATTCAGGTGGCGTCA 58.577 47.619 0.00 0.00 0.00 4.35
4437 4871 1.130561 GCAAAGTATTCAGGTGGCGTC 59.869 52.381 0.00 0.00 0.00 5.19
4438 4872 1.165270 GCAAAGTATTCAGGTGGCGT 58.835 50.000 0.00 0.00 0.00 5.68
4439 4873 1.164411 TGCAAAGTATTCAGGTGGCG 58.836 50.000 0.00 0.00 0.00 5.69
4440 4874 3.005791 AGTTTGCAAAGTATTCAGGTGGC 59.994 43.478 17.91 0.00 0.00 5.01
4441 4875 4.278170 TGAGTTTGCAAAGTATTCAGGTGG 59.722 41.667 19.29 0.00 0.00 4.61
4442 4876 5.437289 TGAGTTTGCAAAGTATTCAGGTG 57.563 39.130 19.29 0.00 0.00 4.00
4443 4877 6.463995 TTTGAGTTTGCAAAGTATTCAGGT 57.536 33.333 19.29 0.00 33.16 4.00
4444 4878 6.587608 GGATTTGAGTTTGCAAAGTATTCAGG 59.412 38.462 19.29 0.00 40.68 3.86
4445 4879 6.587608 GGGATTTGAGTTTGCAAAGTATTCAG 59.412 38.462 19.29 0.00 40.68 3.02
4446 4880 6.267471 AGGGATTTGAGTTTGCAAAGTATTCA 59.733 34.615 19.29 13.87 40.68 2.57
4447 4881 6.691508 AGGGATTTGAGTTTGCAAAGTATTC 58.308 36.000 19.29 12.71 40.68 1.75
4448 4882 6.670695 AGGGATTTGAGTTTGCAAAGTATT 57.329 33.333 19.29 5.03 40.68 1.89
4449 4883 6.458210 CAAGGGATTTGAGTTTGCAAAGTAT 58.542 36.000 19.29 9.73 40.68 2.12
4450 4884 5.738783 GCAAGGGATTTGAGTTTGCAAAGTA 60.739 40.000 19.29 4.99 42.63 2.24
4451 4885 4.696455 CAAGGGATTTGAGTTTGCAAAGT 58.304 39.130 19.34 19.34 40.68 2.66
4452 4886 3.495753 GCAAGGGATTTGAGTTTGCAAAG 59.504 43.478 13.26 0.00 42.63 2.77
4453 4887 3.465871 GCAAGGGATTTGAGTTTGCAAA 58.534 40.909 8.05 8.05 42.63 3.68
4454 4888 2.224257 GGCAAGGGATTTGAGTTTGCAA 60.224 45.455 0.00 0.00 44.33 4.08
4455 4889 1.344114 GGCAAGGGATTTGAGTTTGCA 59.656 47.619 9.36 0.00 44.33 4.08
4456 4890 1.344114 TGGCAAGGGATTTGAGTTTGC 59.656 47.619 0.00 0.00 42.43 3.68
4457 4891 3.749665 TTGGCAAGGGATTTGAGTTTG 57.250 42.857 0.00 0.00 39.21 2.93
4458 4892 3.557686 GCATTGGCAAGGGATTTGAGTTT 60.558 43.478 14.30 0.00 39.21 2.66
4459 4893 2.027837 GCATTGGCAAGGGATTTGAGTT 60.028 45.455 14.30 0.00 39.21 3.01
4460 4894 1.551883 GCATTGGCAAGGGATTTGAGT 59.448 47.619 14.30 0.00 39.21 3.41
4461 4895 1.829222 AGCATTGGCAAGGGATTTGAG 59.171 47.619 14.30 0.00 44.61 3.02
4462 4896 1.941377 AGCATTGGCAAGGGATTTGA 58.059 45.000 14.30 0.00 44.61 2.69
4463 4897 2.352388 CAAGCATTGGCAAGGGATTTG 58.648 47.619 14.30 2.90 43.94 2.32
4464 4898 2.773993 CAAGCATTGGCAAGGGATTT 57.226 45.000 14.30 0.91 43.94 2.17
4476 4910 2.072298 GTGTCGAGAAGCTCAAGCATT 58.928 47.619 4.59 0.00 45.16 3.56
4477 4911 1.719600 GTGTCGAGAAGCTCAAGCAT 58.280 50.000 4.59 0.00 45.16 3.79
4478 4912 0.664466 CGTGTCGAGAAGCTCAAGCA 60.664 55.000 4.59 0.00 45.16 3.91
4479 4913 1.950098 GCGTGTCGAGAAGCTCAAGC 61.950 60.000 13.09 3.58 42.49 4.01
4480 4914 1.347817 GGCGTGTCGAGAAGCTCAAG 61.348 60.000 19.03 0.53 0.00 3.02
4481 4915 1.372997 GGCGTGTCGAGAAGCTCAA 60.373 57.895 19.03 0.00 0.00 3.02
4482 4916 2.082629 TTGGCGTGTCGAGAAGCTCA 62.083 55.000 19.03 12.69 0.00 4.26
4483 4917 0.944311 TTTGGCGTGTCGAGAAGCTC 60.944 55.000 19.03 10.44 0.00 4.09
4484 4918 0.946221 CTTTGGCGTGTCGAGAAGCT 60.946 55.000 19.03 0.00 0.00 3.74
4485 4919 1.493311 CTTTGGCGTGTCGAGAAGC 59.507 57.895 12.01 12.01 0.00 3.86
4486 4920 0.946221 AGCTTTGGCGTGTCGAGAAG 60.946 55.000 0.00 0.00 44.37 2.85
4487 4921 0.531974 AAGCTTTGGCGTGTCGAGAA 60.532 50.000 0.00 0.00 44.37 2.87
4488 4922 0.944311 GAAGCTTTGGCGTGTCGAGA 60.944 55.000 0.00 0.00 44.37 4.04
4489 4923 1.493311 GAAGCTTTGGCGTGTCGAG 59.507 57.895 0.00 0.00 44.37 4.04
4490 4924 2.307309 CGAAGCTTTGGCGTGTCGA 61.307 57.895 5.72 0.00 44.37 4.20
4491 4925 2.170985 CGAAGCTTTGGCGTGTCG 59.829 61.111 5.72 0.00 44.37 4.35
4492 4926 1.204312 GTCGAAGCTTTGGCGTGTC 59.796 57.895 13.87 0.00 44.37 3.67
4493 4927 1.227556 AGTCGAAGCTTTGGCGTGT 60.228 52.632 12.62 0.00 44.37 4.49
4494 4928 1.205064 CAGTCGAAGCTTTGGCGTG 59.795 57.895 12.62 7.81 44.37 5.34
4495 4929 0.032952 TACAGTCGAAGCTTTGGCGT 59.967 50.000 12.62 14.83 44.37 5.68
4496 4930 0.716108 CTACAGTCGAAGCTTTGGCG 59.284 55.000 12.62 10.06 44.37 5.69
4497 4931 2.080286 TCTACAGTCGAAGCTTTGGC 57.920 50.000 10.51 10.51 39.06 4.52
4498 4932 2.932614 CCATCTACAGTCGAAGCTTTGG 59.067 50.000 13.87 3.04 0.00 3.28
4499 4933 3.849911 TCCATCTACAGTCGAAGCTTTG 58.150 45.455 7.44 7.44 0.00 2.77
4500 4934 4.442192 GGATCCATCTACAGTCGAAGCTTT 60.442 45.833 6.95 0.00 0.00 3.51
4501 4935 3.068873 GGATCCATCTACAGTCGAAGCTT 59.931 47.826 6.95 0.00 0.00 3.74
4502 4936 2.625790 GGATCCATCTACAGTCGAAGCT 59.374 50.000 6.95 0.00 0.00 3.74
4503 4937 2.605823 CGGATCCATCTACAGTCGAAGC 60.606 54.545 13.41 0.00 0.00 3.86
4504 4938 2.619177 ACGGATCCATCTACAGTCGAAG 59.381 50.000 13.41 0.00 0.00 3.79
4505 4939 2.357952 CACGGATCCATCTACAGTCGAA 59.642 50.000 13.41 0.00 0.00 3.71
4506 4940 1.947456 CACGGATCCATCTACAGTCGA 59.053 52.381 13.41 0.00 0.00 4.20
4507 4941 1.001268 CCACGGATCCATCTACAGTCG 60.001 57.143 13.41 0.00 0.00 4.18
4508 4942 1.269831 GCCACGGATCCATCTACAGTC 60.270 57.143 13.41 0.00 0.00 3.51
4509 4943 0.753262 GCCACGGATCCATCTACAGT 59.247 55.000 13.41 0.00 0.00 3.55
4510 4944 1.000283 GAGCCACGGATCCATCTACAG 60.000 57.143 13.41 0.00 0.00 2.74
4511 4945 1.040646 GAGCCACGGATCCATCTACA 58.959 55.000 13.41 0.00 0.00 2.74
4512 4946 3.896317 GAGCCACGGATCCATCTAC 57.104 57.895 13.41 0.00 0.00 2.59
4519 4953 2.109126 GTGCAAGGAGCCACGGATC 61.109 63.158 0.00 0.00 44.83 3.36
4520 4954 2.045926 GTGCAAGGAGCCACGGAT 60.046 61.111 0.00 0.00 44.83 4.18
4521 4955 3.113514 TTGTGCAAGGAGCCACGGA 62.114 57.895 0.00 0.00 44.83 4.69
4522 4956 2.594303 TTGTGCAAGGAGCCACGG 60.594 61.111 0.00 0.00 44.83 4.94
4523 4957 2.639286 GTTGTGCAAGGAGCCACG 59.361 61.111 0.00 0.00 44.83 4.94
4524 4958 1.799258 CTGGTTGTGCAAGGAGCCAC 61.799 60.000 0.00 0.00 44.83 5.01
4525 4959 1.529010 CTGGTTGTGCAAGGAGCCA 60.529 57.895 0.00 0.00 44.83 4.75
4526 4960 0.823356 TTCTGGTTGTGCAAGGAGCC 60.823 55.000 0.00 0.00 44.83 4.70
4527 4961 1.251251 ATTCTGGTTGTGCAAGGAGC 58.749 50.000 0.00 0.00 45.96 4.70
4528 4962 3.937706 CTCTATTCTGGTTGTGCAAGGAG 59.062 47.826 0.00 0.00 0.00 3.69
4529 4963 3.307691 CCTCTATTCTGGTTGTGCAAGGA 60.308 47.826 0.00 0.00 0.00 3.36
4530 4964 3.012518 CCTCTATTCTGGTTGTGCAAGG 58.987 50.000 0.00 0.00 0.00 3.61
4531 4965 3.942829 TCCTCTATTCTGGTTGTGCAAG 58.057 45.455 0.00 0.00 0.00 4.01
4532 4966 4.517285 GATCCTCTATTCTGGTTGTGCAA 58.483 43.478 0.00 0.00 0.00 4.08
4533 4967 3.118261 GGATCCTCTATTCTGGTTGTGCA 60.118 47.826 3.84 0.00 0.00 4.57
4534 4968 3.471680 GGATCCTCTATTCTGGTTGTGC 58.528 50.000 3.84 0.00 0.00 4.57
4535 4969 3.455910 TGGGATCCTCTATTCTGGTTGTG 59.544 47.826 12.58 0.00 0.00 3.33
4536 4970 3.736094 TGGGATCCTCTATTCTGGTTGT 58.264 45.455 12.58 0.00 0.00 3.32
4537 4971 4.778213 TTGGGATCCTCTATTCTGGTTG 57.222 45.455 12.58 0.00 0.00 3.77
4538 4972 7.465900 TTATTTGGGATCCTCTATTCTGGTT 57.534 36.000 12.58 0.00 0.00 3.67
4539 4973 7.654287 ATTATTTGGGATCCTCTATTCTGGT 57.346 36.000 12.58 0.00 0.00 4.00
4540 4974 7.094032 GCAATTATTTGGGATCCTCTATTCTGG 60.094 40.741 12.58 0.00 33.22 3.86
4541 4975 7.094032 GGCAATTATTTGGGATCCTCTATTCTG 60.094 40.741 12.58 2.40 33.22 3.02
4542 4976 6.950619 GGCAATTATTTGGGATCCTCTATTCT 59.049 38.462 12.58 0.00 33.22 2.40
4543 4977 6.950619 AGGCAATTATTTGGGATCCTCTATTC 59.049 38.462 12.58 0.00 33.22 1.75
4544 4978 6.867723 AGGCAATTATTTGGGATCCTCTATT 58.132 36.000 12.58 1.03 33.22 1.73
4545 4979 6.474918 AGGCAATTATTTGGGATCCTCTAT 57.525 37.500 12.58 5.09 33.22 1.98
4546 4980 5.930209 AGGCAATTATTTGGGATCCTCTA 57.070 39.130 12.58 0.00 33.22 2.43
4547 4981 4.821532 AGGCAATTATTTGGGATCCTCT 57.178 40.909 12.58 0.00 33.22 3.69
4548 4982 4.281941 GGAAGGCAATTATTTGGGATCCTC 59.718 45.833 12.58 2.25 33.22 3.71
4549 4983 4.226384 GGAAGGCAATTATTTGGGATCCT 58.774 43.478 12.58 0.00 33.22 3.24
4550 4984 3.324846 GGGAAGGCAATTATTTGGGATCC 59.675 47.826 1.92 1.92 33.22 3.36
4551 4985 3.005791 CGGGAAGGCAATTATTTGGGATC 59.994 47.826 0.00 0.00 33.22 3.36
4552 4986 2.965147 CGGGAAGGCAATTATTTGGGAT 59.035 45.455 0.00 0.00 33.22 3.85
4553 4987 2.024846 TCGGGAAGGCAATTATTTGGGA 60.025 45.455 0.00 0.00 33.22 4.37
4554 4988 2.383855 TCGGGAAGGCAATTATTTGGG 58.616 47.619 0.00 0.00 33.22 4.12
4555 4989 3.636300 TGATCGGGAAGGCAATTATTTGG 59.364 43.478 0.00 0.00 33.22 3.28
4556 4990 4.610945 GTGATCGGGAAGGCAATTATTTG 58.389 43.478 0.00 0.00 35.85 2.32
4557 4991 3.315191 CGTGATCGGGAAGGCAATTATTT 59.685 43.478 0.00 0.00 0.00 1.40
4558 4992 2.878406 CGTGATCGGGAAGGCAATTATT 59.122 45.455 0.00 0.00 0.00 1.40
4559 4993 2.494059 CGTGATCGGGAAGGCAATTAT 58.506 47.619 0.00 0.00 0.00 1.28
4560 4994 1.948104 CGTGATCGGGAAGGCAATTA 58.052 50.000 0.00 0.00 0.00 1.40
4561 4995 2.780595 CGTGATCGGGAAGGCAATT 58.219 52.632 0.00 0.00 0.00 2.32
4562 4996 4.540153 CGTGATCGGGAAGGCAAT 57.460 55.556 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.