AutoCloner

Multiple sequence alignment - TraesCS2A01G370600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G370600	chr2A	100.000	2876	0	0	1	2876	613242172	613239297	0.000000e+00	5312.0
1	TraesCS2A01G370600	chr2A	94.684	997	51	2	30	1025	175030954	175031949	0.000000e+00	1546.0
2	TraesCS2A01G370600	chr2D	93.271	2556	104	26	27	2567	13523096	13520594	0.000000e+00	3705.0
3	TraesCS2A01G370600	chr3D	93.103	2552	133	28	36	2567	376078863	376076335	0.000000e+00	3698.0
4	TraesCS2A01G370600	chr3D	98.710	310	4	0	2567	2876	376075794	376075485	4.190000e-153	551.0
5	TraesCS2A01G370600	chr5A	92.054	2542	117	30	30	2567	115998062	115995602	0.000000e+00	3496.0
6	TraesCS2A01G370600	chr5A	98.387	310	4	1	2567	2876	115995058	115994750	7.010000e-151	544.0
7	TraesCS2A01G370600	chr3B	96.896	1772	54	1	797	2567	7318875	7320646	0.000000e+00	2966.0
8	TraesCS2A01G370600	chr3B	90.511	548	38	8	30	571	7318251	7318790	0.000000e+00	712.0
9	TraesCS2A01G370600	chr3B	98.065	310	6	0	2567	2876	7321190	7321499	9.070000e-150	540.0
10	TraesCS2A01G370600	chr4B	96.778	1769	56	1	800	2567	595724640	595722872	0.000000e+00	2950.0
11	TraesCS2A01G370600	chr4B	91.107	551	35	6	30	574	595725267	595724725	0.000000e+00	734.0
12	TraesCS2A01G370600	chr4B	97.756	312	5	1	2567	2876	595722328	595722017	1.170000e-148	536.0
13	TraesCS2A01G370600	chr2B	93.956	1853	85	9	728	2567	796755226	796753388	0.000000e+00	2776.0
14	TraesCS2A01G370600	chr2B	96.023	1408	52	3	1161	2567	33473353	33471949	0.000000e+00	2287.0
15	TraesCS2A01G370600	chr2B	91.040	692	39	5	485	1176	193471111	193470443	0.000000e+00	913.0
16	TraesCS2A01G370600	chr2B	91.344	543	38	5	30	571	33482917	33482383	0.000000e+00	734.0
17	TraesCS2A01G370600	chr2B	96.452	310	10	1	2567	2876	33471405	33471097	7.110000e-141	510.0
18	TraesCS2A01G370600	chr2B	95.484	310	14	0	2567	2876	796752848	796752539	1.990000e-136	496.0
19	TraesCS2A01G370600	chr5D	91.201	1591	103	21	30	1613	431181776	431180216	0.000000e+00	2128.0
20	TraesCS2A01G370600	chr5D	96.462	961	33	1	1608	2567	431176774	431175814	0.000000e+00	1585.0
21	TraesCS2A01G370600	chr5D	97.419	310	8	0	2567	2876	431175326	431175017	1.960000e-146	529.0
22	TraesCS2A01G370600	chr5D	96.875	32	0	1	1	31	561918840	561918809	5.000000e-03	52.8
23	TraesCS2A01G370600	chr7B	93.145	1313	68	11	528	1831	33410180	33411479	0.000000e+00	1906.0
24	TraesCS2A01G370600	chr6A	89.433	1429	79	33	53	1475	367769263	367767901	0.000000e+00	1736.0
25	TraesCS2A01G370600	chr6A	95.316	918	29	4	1470	2386	367765375	367764471	0.000000e+00	1445.0
26	TraesCS2A01G370600	chr6A	95.902	854	34	1	561	1414	34076926	34077778	0.000000e+00	1382.0
27	TraesCS2A01G370600	chr6A	89.574	470	38	6	30	496	34076258	34076719	1.150000e-163	586.0
28	TraesCS2A01G370600	chr6A	96.774	310	10	0	2567	2876	367764005	367763696	4.250000e-143	518.0
29	TraesCS2A01G370600	chr6A	96.774	31	1	0	1	31	83185555	83185525	5.000000e-03	52.8
30	TraesCS2A01G370600	chr5B	97.097	689	20	0	800	1488	322287388	322286700	0.000000e+00	1162.0
31	TraesCS2A01G370600	chr5B	92.153	548	32	6	30	574	322288012	322287473	0.000000e+00	763.0
32	TraesCS2A01G370600	chr5B	98.065	310	6	0	2567	2876	322285832	322285523	9.070000e-150	540.0
33	TraesCS2A01G370600	chr7D	96.970	33	0	1	1	32	20516286	20516254	1.000000e-03	54.7
34	TraesCS2A01G370600	chr6B	100.000	29	0	0	1	29	679978196	679978168	1.000000e-03	54.7
35	TraesCS2A01G370600	chrUn	100.000	28	0	0	1	28	2693252	2693279	5.000000e-03	52.8
36	TraesCS2A01G370600	chrUn	100.000	28	0	0	1	28	9840391	9840418	5.000000e-03	52.8
37	TraesCS2A01G370600	chrUn	100.000	28	0	0	1	28	27476017	27475990	5.000000e-03	52.8
38	TraesCS2A01G370600	chrUn	100.000	28	0	0	1	28	42198747	42198720	5.000000e-03	52.8
39	TraesCS2A01G370600	chr1D	96.875	32	0	1	1	31	335584654	335584685	5.000000e-03	52.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G370600	chr2A	613239297	613242172	2875	True	5312.000000	5312	100.000000	1	2876	1	chr2A.!!$R1	2875
1	TraesCS2A01G370600	chr2A	175030954	175031949	995	False	1546.000000	1546	94.684000	30	1025	1	chr2A.!!$F1	995
2	TraesCS2A01G370600	chr2D	13520594	13523096	2502	True	3705.000000	3705	93.271000	27	2567	1	chr2D.!!$R1	2540
3	TraesCS2A01G370600	chr3D	376075485	376078863	3378	True	2124.500000	3698	95.906500	36	2876	2	chr3D.!!$R1	2840
4	TraesCS2A01G370600	chr5A	115994750	115998062	3312	True	2020.000000	3496	95.220500	30	2876	2	chr5A.!!$R1	2846
5	TraesCS2A01G370600	chr3B	7318251	7321499	3248	False	1406.000000	2966	95.157333	30	2876	3	chr3B.!!$F1	2846
6	TraesCS2A01G370600	chr4B	595722017	595725267	3250	True	1406.666667	2950	95.213667	30	2876	3	chr4B.!!$R1	2846
7	TraesCS2A01G370600	chr2B	796752539	796755226	2687	True	1636.000000	2776	94.720000	728	2876	2	chr2B.!!$R4	2148
8	TraesCS2A01G370600	chr2B	33471097	33473353	2256	True	1398.500000	2287	96.237500	1161	2876	2	chr2B.!!$R3	1715
9	TraesCS2A01G370600	chr2B	193470443	193471111	668	True	913.000000	913	91.040000	485	1176	1	chr2B.!!$R2	691
10	TraesCS2A01G370600	chr2B	33482383	33482917	534	True	734.000000	734	91.344000	30	571	1	chr2B.!!$R1	541
11	TraesCS2A01G370600	chr5D	431175017	431181776	6759	True	1414.000000	2128	95.027333	30	2876	3	chr5D.!!$R2	2846
12	TraesCS2A01G370600	chr7B	33410180	33411479	1299	False	1906.000000	1906	93.145000	528	1831	1	chr7B.!!$F1	1303
13	TraesCS2A01G370600	chr6A	367763696	367769263	5567	True	1233.000000	1736	93.841000	53	2876	3	chr6A.!!$R2	2823
14	TraesCS2A01G370600	chr6A	34076258	34077778	1520	False	984.000000	1382	92.738000	30	1414	2	chr6A.!!$F1	1384
15	TraesCS2A01G370600	chr5B	322285523	322288012	2489	True	821.666667	1162	95.771667	30	2876	3	chr5B.!!$R1	2846

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
182	187	0.239347	CTGCCAGGACGCTGAAAAAG	59.761	55.0	0.0	0.0	0.00	2.27	F
1528	4301	0.036306	AAGGGGCGAAGACGATGTTT	59.964	50.0	0.0	0.0	42.66	2.83	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1543	4316	0.305009	TCATCGTCGCTCTCATCGTC	59.695	55.000	0.0	0.0	0.0	4.20	R
2342	8588	2.430465	TGAATCTGCCTGTCAAGAAGC	58.570	47.619	0.0	0.0	0.0	3.86	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
26	27	9.570488	AAGAGCGTTTAGAATACTAAAGTAGTG	57.430	33.333	0.00	0.00	45.42	2.74
27	28	8.954350	AGAGCGTTTAGAATACTAAAGTAGTGA	58.046	33.333	0.00	0.00	45.42	3.41
28	29	9.224058	GAGCGTTTAGAATACTAAAGTAGTGAG	57.776	37.037	0.00	0.00	45.42	3.51
167	170	0.919710	ATGTCCTTCTTACCCCTGCC	59.080	55.000	0.00	0.00	0.00	4.85
179	184	2.032528	CCTGCCAGGACGCTGAAA	59.967	61.111	4.15	0.00	37.67	2.69
182	187	0.239347	CTGCCAGGACGCTGAAAAAG	59.761	55.000	0.00	0.00	0.00	2.27
199	206	2.951229	AAGAACCTGGTTGACCGAAT	57.049	45.000	18.42	0.00	39.43	3.34
216	224	1.298859	AATCGTCAAACAGGGCGCTC	61.299	55.000	7.64	1.48	0.00	5.03
217	225	2.172483	ATCGTCAAACAGGGCGCTCT	62.172	55.000	2.34	2.34	0.00	4.09
525	571	4.394712	GGAGGTCCAGGTGCGGTG	62.395	72.222	0.00	0.00	35.64	4.94
565	659	1.621672	GGAGGCAGAGGAAGGTCCAG	61.622	65.000	0.00	0.00	39.61	3.86
609	844	2.571757	GATGGTGCGACGACCTCA	59.428	61.111	14.67	1.74	36.88	3.86
678	913	6.646653	TCTCTATATTTGAGTATTTGCTGCCG	59.353	38.462	0.00	0.00	33.59	5.69
698	933	3.176708	CGTGATACGTCCTTGAACGAAT	58.823	45.455	3.16	0.00	45.37	3.34
868	1103	4.082625	TGTTGCTGCCAAATCTACAATGAG	60.083	41.667	0.00	0.00	31.68	2.90
936	1171	4.574421	TGGATAATCTGTTTACACATGGCG	59.426	41.667	0.00	0.00	30.39	5.69
1167	1408	2.287427	GCAGTACTCGCCTCGCTATTTA	60.287	50.000	0.00	0.00	0.00	1.40
1186	1427	4.488126	TTAGAAGTTGCACATGTTCAGC	57.512	40.909	4.22	4.22	0.00	4.26
1258	1499	8.463930	AGAATTGGTGTCTATGTTTGAGAAAA	57.536	30.769	0.00	0.00	0.00	2.29
1393	1635	8.824781	CAGAACAAGACGATGATGATTATCTTT	58.175	33.333	0.00	0.00	34.31	2.52
1408	1650	7.350382	TGATTATCTTTGCAACCCAATACCTA	58.650	34.615	0.00	0.00	32.49	3.08
1434	1676	4.566545	TGAACATGTTGGTGTTGATGAC	57.433	40.909	17.58	0.00	42.08	3.06
1435	1677	3.950395	TGAACATGTTGGTGTTGATGACA	59.050	39.130	17.58	0.00	42.08	3.58
1514	4287	3.279434	CCTGTTCCGATAAAGAAAGGGG	58.721	50.000	0.00	0.00	0.00	4.79
1522	4295	2.088950	TAAAGAAAGGGGCGAAGACG	57.911	50.000	0.00	0.00	33.41	4.18
1528	4301	0.036306	AAGGGGCGAAGACGATGTTT	59.964	50.000	0.00	0.00	42.66	2.83
1535	4308	2.923655	GCGAAGACGATGTTTCTGATCA	59.076	45.455	0.00	0.00	42.66	2.92
1536	4309	3.553511	GCGAAGACGATGTTTCTGATCAT	59.446	43.478	0.00	0.00	42.66	2.45
1537	4310	4.549680	GCGAAGACGATGTTTCTGATCATG	60.550	45.833	0.00	0.00	42.66	3.07
1538	4311	4.800471	CGAAGACGATGTTTCTGATCATGA	59.200	41.667	0.00	0.00	42.66	3.07
1539	4312	5.051841	CGAAGACGATGTTTCTGATCATGAG	60.052	44.000	0.09	0.00	42.66	2.90
1540	4313	5.588958	AGACGATGTTTCTGATCATGAGA	57.411	39.130	0.09	0.00	0.00	3.27
1541	4314	5.590145	AGACGATGTTTCTGATCATGAGAG	58.410	41.667	0.09	0.00	0.00	3.20
1542	4315	4.118410	ACGATGTTTCTGATCATGAGAGC	58.882	43.478	0.09	0.00	0.00	4.09
1543	4316	3.181973	CGATGTTTCTGATCATGAGAGCG	59.818	47.826	0.09	0.00	31.29	5.03
1544	4317	3.874392	TGTTTCTGATCATGAGAGCGA	57.126	42.857	0.09	0.00	31.29	4.93
1545	4318	3.515630	TGTTTCTGATCATGAGAGCGAC	58.484	45.455	0.09	3.07	31.29	5.19
1546	4319	2.481903	TTCTGATCATGAGAGCGACG	57.518	50.000	0.09	0.00	31.29	5.12
1557	4330	1.652930	GAGCGACGATGAGAGCGAC	60.653	63.158	0.00	0.00	33.75	5.19
1624	7868	3.141002	CAGAGCATGCACCACATTTAC	57.859	47.619	21.98	0.00	36.64	2.01
1949	8195	7.453393	AGAAAGAACTCTTGTGGTCATGATTA	58.547	34.615	0.00	0.00	36.12	1.75
1964	8210	9.295825	TGGTCATGATTACTCAAGTACAAAAAT	57.704	29.630	0.00	0.00	34.37	1.82
2050	8296	2.102252	GAGGATGCAACTCTAGGACCAG	59.898	54.545	12.94	0.00	32.28	4.00
2127	8373	4.039730	AGAGTATACATGGGTAAGCTGCTG	59.960	45.833	1.35	0.00	32.19	4.41
2147	8393	4.444876	GCTGGCCTTGAAGGAACTATATGA	60.445	45.833	16.93	0.00	38.49	2.15
2159	8405	9.829507	GAAGGAACTATATGATGATTGGGATAG	57.170	37.037	0.00	0.00	38.49	2.08
2342	8588	4.564041	CCATACTTGGCAGTAGATAGCAG	58.436	47.826	0.00	0.00	38.96	4.24
2371	8617	0.337428	AGGCAGATTCAAGGGGCAAT	59.663	50.000	0.00	0.00	0.00	3.56
2374	8620	1.551883	GCAGATTCAAGGGGCAATTGT	59.448	47.619	7.40	0.00	0.00	2.71
2490	8736	2.430332	GCAATTGGTTAGGCAAGCCATA	59.570	45.455	14.40	0.20	38.92	2.74
2491	8737	3.070015	GCAATTGGTTAGGCAAGCCATAT	59.930	43.478	14.40	0.00	38.92	1.78
2593	9398	1.172180	TCTGGCCTTCCTTGCAAACG	61.172	55.000	3.32	0.00	0.00	3.60

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	9.570488	CACTACTTTAGTATTCTAAACGCTCTT	57.430	33.333	0.76	0.00	40.05	2.85
3	4	8.738106	ACTCACTACTTTAGTATTCTAAACGCT	58.262	33.333	0.76	0.00	40.05	5.07
4	5	8.908172	ACTCACTACTTTAGTATTCTAAACGC	57.092	34.615	0.76	0.00	40.05	4.84
18	19	8.890718	GTCAAAAAGGAAACTACTCACTACTTT	58.109	33.333	0.00	0.00	42.68	2.66
19	20	7.498239	GGTCAAAAAGGAAACTACTCACTACTT	59.502	37.037	0.00	0.00	42.68	2.24
20	21	6.990939	GGTCAAAAAGGAAACTACTCACTACT	59.009	38.462	0.00	0.00	42.68	2.57
21	22	6.204301	GGGTCAAAAAGGAAACTACTCACTAC	59.796	42.308	0.00	0.00	42.68	2.73
22	23	6.100714	AGGGTCAAAAAGGAAACTACTCACTA	59.899	38.462	0.00	0.00	42.68	2.74
23	24	5.104067	AGGGTCAAAAAGGAAACTACTCACT	60.104	40.000	0.00	0.00	42.68	3.41
24	25	5.131067	AGGGTCAAAAAGGAAACTACTCAC	58.869	41.667	0.00	0.00	42.68	3.51
25	26	5.382664	AGGGTCAAAAAGGAAACTACTCA	57.617	39.130	0.00	0.00	42.68	3.41
26	27	7.812690	TTTAGGGTCAAAAAGGAAACTACTC	57.187	36.000	0.00	0.00	42.68	2.59
27	28	8.598202	TTTTTAGGGTCAAAAAGGAAACTACT	57.402	30.769	0.00	0.00	42.68	2.57
28	29	9.826574	AATTTTTAGGGTCAAAAAGGAAACTAC	57.173	29.630	0.00	0.00	42.68	2.73
167	170	2.031682	CAGGTTCTTTTTCAGCGTCCTG	60.032	50.000	0.00	0.00	40.54	3.86
179	184	2.721425	TTCGGTCAACCAGGTTCTTT	57.279	45.000	0.12	0.00	35.14	2.52
182	187	1.076332	CGATTCGGTCAACCAGGTTC	58.924	55.000	0.12	0.00	35.14	3.62
199	206	2.357034	GAGCGCCCTGTTTGACGA	60.357	61.111	2.29	0.00	0.00	4.20
233	245	2.520184	AGGAGAGTAGGGAGGGAATCT	58.480	52.381	0.00	0.00	0.00	2.40
604	839	0.035630	GGAGCACTTGCATCTGAGGT	60.036	55.000	3.62	0.00	45.16	3.85
609	844	2.437359	GCCGGAGCACTTGCATCT	60.437	61.111	5.05	0.00	45.16	2.90
678	913	5.575957	TCTATTCGTTCAAGGACGTATCAC	58.424	41.667	0.26	0.00	43.23	3.06
714	949	6.665474	GCAAATATGTTGCATTTTGGATCA	57.335	33.333	14.05	0.00	44.34	2.92
1056	1294	4.916183	AGCATTTGATATCCTTCCTAGCC	58.084	43.478	0.00	0.00	0.00	3.93
1167	1408	2.033801	GTGCTGAACATGTGCAACTTCT	59.966	45.455	8.18	0.00	38.50	2.85
1258	1499	4.757149	GTGCACAACCTTTGTCTTAGAGAT	59.243	41.667	13.17	0.00	43.23	2.75
1393	1635	5.186256	TCATTCTTAGGTATTGGGTTGCA	57.814	39.130	0.00	0.00	0.00	4.08
1408	1650	5.850557	TCAACACCAACATGTTCATTCTT	57.149	34.783	8.48	0.00	40.89	2.52
1514	4287	2.923655	TGATCAGAAACATCGTCTTCGC	59.076	45.455	0.00	0.00	36.96	4.70
1522	4295	4.208873	GTCGCTCTCATGATCAGAAACATC	59.791	45.833	0.09	0.00	0.00	3.06
1528	4301	1.668419	TCGTCGCTCTCATGATCAGA	58.332	50.000	0.09	0.00	0.00	3.27
1535	4308	0.310543	GCTCTCATCGTCGCTCTCAT	59.689	55.000	0.00	0.00	0.00	2.90
1536	4309	1.724467	GCTCTCATCGTCGCTCTCA	59.276	57.895	0.00	0.00	0.00	3.27
1537	4310	1.368731	CGCTCTCATCGTCGCTCTC	60.369	63.158	0.00	0.00	0.00	3.20
1538	4311	1.815840	TCGCTCTCATCGTCGCTCT	60.816	57.895	0.00	0.00	0.00	4.09
1539	4312	1.652930	GTCGCTCTCATCGTCGCTC	60.653	63.158	0.00	0.00	0.00	5.03
1540	4313	2.405594	GTCGCTCTCATCGTCGCT	59.594	61.111	0.00	0.00	0.00	4.93
1541	4314	2.703425	ATCGTCGCTCTCATCGTCGC	62.703	60.000	0.00	0.00	38.09	5.19
1542	4315	0.989315	CATCGTCGCTCTCATCGTCG	60.989	60.000	0.00	0.00	39.15	5.12
1543	4316	0.305009	TCATCGTCGCTCTCATCGTC	59.695	55.000	0.00	0.00	0.00	4.20
1544	4317	0.306228	CTCATCGTCGCTCTCATCGT	59.694	55.000	0.00	0.00	0.00	3.73
1545	4318	0.583917	TCTCATCGTCGCTCTCATCG	59.416	55.000	0.00	0.00	0.00	3.84
1546	4319	1.662876	GCTCTCATCGTCGCTCTCATC	60.663	57.143	0.00	0.00	0.00	2.92
1557	4330	1.336440	ACTTCCTCATCGCTCTCATCG	59.664	52.381	0.00	0.00	0.00	3.84
1644	7889	7.445402	GGATATTTTCTTCCTTCGATCATTGGA	59.555	37.037	0.00	0.00	0.00	3.53
1912	8158	7.775561	ACAAGAGTTCTTTCTCACCTACAAAAT	59.224	33.333	0.00	0.00	36.97	1.82
1964	8210	8.420222	TGGTTGCATTCTTTATCTTCTTTTTCA	58.580	29.630	0.00	0.00	0.00	2.69
1998	8244	5.163622	CCAATCCTTCACGTGCTCAAATATT	60.164	40.000	11.67	1.43	0.00	1.28
2003	8249	1.522668	CCAATCCTTCACGTGCTCAA	58.477	50.000	11.67	0.00	0.00	3.02
2050	8296	0.807496	AGCTTCTTTCGCAATGCCTC	59.193	50.000	0.00	0.00	0.00	4.70
2127	8373	5.869579	TCATCATATAGTTCCTTCAAGGCC	58.130	41.667	0.00	0.00	34.61	5.19
2147	8393	9.240734	GATTATCAAAGCTTCTATCCCAATCAT	57.759	33.333	0.00	0.00	0.00	2.45
2342	8588	2.430465	TGAATCTGCCTGTCAAGAAGC	58.570	47.619	0.00	0.00	0.00	3.86
2371	8617	4.149598	TCAAGAGTGGTAGCACTAGACAA	58.850	43.478	26.58	9.60	35.23	3.18
2374	8620	3.701542	CCATCAAGAGTGGTAGCACTAGA	59.298	47.826	26.58	22.64	35.23	2.43
2462	8708	3.164268	TGCCTAACCAATTGCATGAACT	58.836	40.909	0.00	0.00	0.00	3.01
2593	9398	6.520272	AGAGATGTGATAAATGCTAGACCAC	58.480	40.000	0.00	0.00	0.00	4.16

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.