Multiple sequence alignment - TraesCS2A01G368200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G368200 chr2A 100.000 7455 0 0 871 8325 611934165 611941619 0.000000e+00 13767.0
1 TraesCS2A01G368200 chr2A 100.000 393 0 0 1 393 611933295 611933687 0.000000e+00 726.0
2 TraesCS2A01G368200 chr2A 96.692 393 12 1 1 393 635449127 635449518 0.000000e+00 652.0
3 TraesCS2A01G368200 chr2D 93.187 4007 201 33 4368 8325 470207542 470211525 0.000000e+00 5821.0
4 TraesCS2A01G368200 chr2D 93.917 2696 126 19 997 3667 470204323 470207005 0.000000e+00 4036.0
5 TraesCS2A01G368200 chr2D 91.577 463 29 4 3907 4365 470207033 470207489 1.520000e-176 630.0
6 TraesCS2A01G368200 chr2D 87.500 80 10 0 6631 6710 49060822 49060743 8.900000e-15 93.5
7 TraesCS2A01G368200 chr2B 93.264 2702 137 24 997 3667 548944758 548947445 0.000000e+00 3940.0
8 TraesCS2A01G368200 chr2B 92.964 1407 67 7 5620 7003 548949361 548950758 0.000000e+00 2021.0
9 TraesCS2A01G368200 chr2B 95.386 1257 56 2 4368 5622 548947982 548949238 0.000000e+00 1999.0
10 TraesCS2A01G368200 chr2B 92.581 1321 62 21 7032 8325 548950997 548952308 0.000000e+00 1864.0
11 TraesCS2A01G368200 chr2B 90.497 463 34 3 3907 4365 548947473 548947929 3.320000e-168 603.0
12 TraesCS2A01G368200 chr4B 82.193 921 132 23 2236 3146 42319193 42320091 0.000000e+00 763.0
13 TraesCS2A01G368200 chr4B 78.372 860 152 26 2309 3161 40064860 40064028 2.060000e-145 527.0
14 TraesCS2A01G368200 chr4B 82.899 345 55 3 6611 6953 42323448 42323790 2.920000e-79 307.0
15 TraesCS2A01G368200 chr4B 86.765 272 26 7 7082 7352 42323884 42324146 2.270000e-75 294.0
16 TraesCS2A01G368200 chr3A 97.455 393 9 1 1 393 437961244 437960853 0.000000e+00 669.0
17 TraesCS2A01G368200 chr7A 97.201 393 10 1 1 393 540332774 540333165 0.000000e+00 664.0
18 TraesCS2A01G368200 chr7A 96.692 393 12 1 1 393 285895722 285896113 0.000000e+00 652.0
19 TraesCS2A01G368200 chr7A 85.578 631 79 9 2242 2862 40365599 40364971 0.000000e+00 651.0
20 TraesCS2A01G368200 chr7A 79.794 678 115 18 4438 5107 40363598 40362935 2.720000e-129 473.0
21 TraesCS2A01G368200 chr7A 88.278 273 30 2 7057 7328 40361080 40360809 8.060000e-85 326.0
22 TraesCS2A01G368200 chr7A 97.312 186 3 2 3709 3892 83785017 83784832 1.740000e-81 315.0
23 TraesCS2A01G368200 chr7A 82.521 349 55 5 6611 6954 40361506 40361159 1.360000e-77 302.0
24 TraesCS2A01G368200 chr7A 86.957 230 29 1 2954 3182 40364895 40364666 2.980000e-64 257.0
25 TraesCS2A01G368200 chr7A 77.938 417 70 18 6061 6465 40361922 40361516 3.000000e-59 241.0
26 TraesCS2A01G368200 chr6A 97.201 393 10 1 1 393 307187947 307188338 0.000000e+00 664.0
27 TraesCS2A01G368200 chr6A 96.175 183 7 0 3709 3891 153373069 153372887 4.880000e-77 300.0
28 TraesCS2A01G368200 chr4D 85.404 644 85 7 2236 2871 29799816 29800458 0.000000e+00 660.0
29 TraesCS2A01G368200 chr4D 97.814 183 4 0 3709 3891 482703444 482703626 4.850000e-82 316.0
30 TraesCS2A01G368200 chr4D 82.319 345 57 3 6611 6953 29803841 29804183 6.320000e-76 296.0
31 TraesCS2A01G368200 chr4D 85.830 247 28 5 7083 7329 29804275 29804514 1.070000e-63 255.0
32 TraesCS2A01G368200 chr4A 85.601 632 83 6 2247 2871 573363905 573363275 0.000000e+00 656.0
33 TraesCS2A01G368200 chr4A 84.921 630 85 7 2242 2862 647092137 647091509 5.480000e-176 628.0
34 TraesCS2A01G368200 chr4A 87.179 273 33 2 7057 7328 647087934 647087663 8.120000e-80 309.0
35 TraesCS2A01G368200 chr4A 97.253 182 5 0 3709 3890 681713095 681712914 8.120000e-80 309.0
36 TraesCS2A01G368200 chr4A 82.471 348 52 5 6611 6954 647088354 647088012 6.320000e-76 296.0
37 TraesCS2A01G368200 chr4A 86.641 262 27 6 7082 7342 573358844 573358590 4.920000e-72 283.0
38 TraesCS2A01G368200 chr4A 84.420 276 39 3 7054 7328 646974655 646974383 1.380000e-67 268.0
39 TraesCS2A01G368200 chr4A 85.830 247 35 0 7082 7328 647040136 647039890 6.410000e-66 263.0
40 TraesCS2A01G368200 chr4A 78.846 416 67 17 6061 6465 647088769 647088364 2.300000e-65 261.0
41 TraesCS2A01G368200 chr4A 84.151 265 40 1 7050 7314 647053196 647052934 1.070000e-63 255.0
42 TraesCS2A01G368200 chr4A 86.087 230 31 1 2954 3182 647091436 647091207 6.450000e-61 246.0
43 TraesCS2A01G368200 chr4A 83.590 195 30 2 2955 3148 728228721 728228914 1.850000e-41 182.0
44 TraesCS2A01G368200 chr4A 78.073 301 49 15 6177 6465 646842313 646842018 3.090000e-39 174.0
45 TraesCS2A01G368200 chr4A 82.759 174 26 2 6611 6781 573359418 573359246 1.450000e-32 152.0
46 TraesCS2A01G368200 chr4A 91.358 81 7 0 3068 3148 647416550 647416630 2.460000e-20 111.0
47 TraesCS2A01G368200 chr4A 91.358 81 7 0 3068 3148 728672873 728672793 2.460000e-20 111.0
48 TraesCS2A01G368200 chr5A 96.692 393 12 1 1 393 2658131 2658522 0.000000e+00 652.0
49 TraesCS2A01G368200 chr1A 96.692 393 12 1 1 393 75823200 75822809 0.000000e+00 652.0
50 TraesCS2A01G368200 chr1A 96.684 392 12 1 1 392 59637240 59637630 0.000000e+00 651.0
51 TraesCS2A01G368200 chr1A 96.447 394 12 2 1 393 52743160 52743552 0.000000e+00 649.0
52 TraesCS2A01G368200 chr7D 85.556 630 81 7 2242 2862 40454236 40453608 0.000000e+00 651.0
53 TraesCS2A01G368200 chr7D 80.147 680 114 17 4438 5107 40452302 40451634 9.710000e-134 488.0
54 TraesCS2A01G368200 chr7D 94.764 191 8 2 3709 3899 567733432 567733244 6.320000e-76 296.0
55 TraesCS2A01G368200 chr7D 81.322 348 56 5 6611 6954 40450163 40449821 2.960000e-69 274.0
56 TraesCS2A01G368200 chr7D 79.327 416 64 18 6061 6465 40450577 40450173 1.060000e-68 272.0
57 TraesCS2A01G368200 chr7D 86.522 230 30 1 2954 3182 40453532 40453303 1.390000e-62 252.0
58 TraesCS2A01G368200 chr3D 97.790 181 4 0 3709 3889 422517613 422517793 6.270000e-81 313.0
59 TraesCS2A01G368200 chr6B 96.721 183 6 0 3709 3891 225525368 225525550 1.050000e-78 305.0
60 TraesCS2A01G368200 chr6B 79.545 132 23 3 2741 2870 35542723 35542852 3.200000e-14 91.6
61 TraesCS2A01G368200 chr6B 79.545 132 23 3 2741 2870 35556487 35556616 3.200000e-14 91.6
62 TraesCS2A01G368200 chr5B 96.685 181 6 0 3710 3890 574956625 574956445 1.360000e-77 302.0
63 TraesCS2A01G368200 chr5D 94.737 190 10 0 3706 3895 62177095 62177284 6.320000e-76 296.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G368200 chr2A 611933295 611941619 8324 False 7246.500000 13767 100.000000 1 8325 2 chr2A.!!$F2 8324
1 TraesCS2A01G368200 chr2D 470204323 470211525 7202 False 3495.666667 5821 92.893667 997 8325 3 chr2D.!!$F1 7328
2 TraesCS2A01G368200 chr2B 548944758 548952308 7550 False 2085.400000 3940 92.938400 997 8325 5 chr2B.!!$F1 7328
3 TraesCS2A01G368200 chr4B 40064028 40064860 832 True 527.000000 527 78.372000 2309 3161 1 chr4B.!!$R1 852
4 TraesCS2A01G368200 chr4B 42319193 42324146 4953 False 454.666667 763 83.952333 2236 7352 3 chr4B.!!$F1 5116
5 TraesCS2A01G368200 chr7A 40360809 40365599 4790 True 375.000000 651 83.511000 2242 7328 6 chr7A.!!$R2 5086
6 TraesCS2A01G368200 chr4D 29799816 29804514 4698 False 403.666667 660 84.517667 2236 7329 3 chr4D.!!$F2 5093
7 TraesCS2A01G368200 chr4A 573358590 573363905 5315 True 363.666667 656 85.000333 2247 7342 3 chr4A.!!$R7 5095
8 TraesCS2A01G368200 chr4A 647087663 647092137 4474 True 348.000000 628 83.900800 2242 7328 5 chr4A.!!$R8 5086
9 TraesCS2A01G368200 chr7D 40449821 40454236 4415 True 387.400000 651 82.574800 2242 6954 5 chr7D.!!$R2 4712


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
280 281 0.165944 CGTGAAGGGATTGACAACGC 59.834 55.000 0.00 0.00 0.00 4.84 F
1451 1452 0.107654 GTATGAGGTCCCCACTGTGC 60.108 60.000 1.29 0.00 0.00 4.57 F
2544 2563 0.180406 GGAATGGTATGCACGGTCCT 59.820 55.000 0.00 0.00 0.00 3.85 F
3753 3903 0.178981 AGCTGTTGCCTTGTGACCAT 60.179 50.000 0.00 0.00 40.80 3.55 F
3815 3965 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67 F
3816 3966 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73 F
3842 3992 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46 F
3918 4071 0.684153 AGGGGCGCTGCATTAACAAT 60.684 50.000 7.64 0.00 0.00 2.71 F
4473 5588 0.820871 CTGGGAAAGGAGACGAGGAG 59.179 60.000 0.00 0.00 0.00 3.69 F
5787 7493 1.880027 TCGCTGAAAGGAAAAAGCTCC 59.120 47.619 0.00 0.00 33.41 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1498 1505 0.480690 ACCAACAGGTAATGGCACCA 59.519 50.000 0.00 0.0 41.40 4.17 R
2703 2729 0.178068 TCTGCCGAGCCACTTTATCC 59.822 55.000 0.00 0.0 0.00 2.59 R
3765 3915 0.034896 GGCTGTTTCCAGGACTCGAA 59.965 55.000 0.00 0.0 39.22 3.71 R
5692 7378 1.344114 GGAACCAGCCAAGCAAAATGA 59.656 47.619 0.00 0.0 0.00 2.57 R
5769 7475 1.880027 TCGGAGCTTTTTCCTTTCAGC 59.120 47.619 0.00 0.0 34.96 4.26 R
5813 7519 1.896220 TGTGCAACTTCATCCAGTCC 58.104 50.000 0.00 0.0 38.04 3.85 R
5827 7534 1.407299 CGGATTGGAGAAGGATGTGCA 60.407 52.381 0.00 0.0 0.00 4.57 R
5906 7615 0.745845 GATGCAGGCTCAATGGTCGT 60.746 55.000 0.00 0.0 0.00 4.34 R
6102 8040 0.391597 TGTCCCCGACAGTTTGAGAC 59.608 55.000 0.00 0.0 37.67 3.36 R
7733 10392 0.386985 GTCGGATCGGATAGGCGTTC 60.387 60.000 6.23 0.0 0.00 3.95 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.492077 ACATGATCATGCCTAGATATTCTCA 57.508 36.000 31.17 0.00 42.39 3.27
25 26 8.091952 ACATGATCATGCCTAGATATTCTCAT 57.908 34.615 31.17 7.00 42.39 2.90
26 27 9.210228 ACATGATCATGCCTAGATATTCTCATA 57.790 33.333 31.17 0.00 42.39 2.15
53 54 9.941664 ATTATTCACTTTTCTATCAATTGCTCG 57.058 29.630 0.00 0.00 0.00 5.03
54 55 7.615582 ATTCACTTTTCTATCAATTGCTCGA 57.384 32.000 0.00 0.00 0.00 4.04
55 56 7.615582 TTCACTTTTCTATCAATTGCTCGAT 57.384 32.000 0.00 0.00 0.00 3.59
56 57 8.716646 TTCACTTTTCTATCAATTGCTCGATA 57.283 30.769 0.00 0.00 0.00 2.92
57 58 8.357796 TCACTTTTCTATCAATTGCTCGATAG 57.642 34.615 0.00 3.24 41.59 2.08
58 59 7.981789 TCACTTTTCTATCAATTGCTCGATAGT 59.018 33.333 0.00 0.00 41.19 2.12
59 60 9.249457 CACTTTTCTATCAATTGCTCGATAGTA 57.751 33.333 0.00 0.00 41.19 1.82
60 61 9.817809 ACTTTTCTATCAATTGCTCGATAGTAA 57.182 29.630 0.00 0.89 41.19 2.24
65 66 9.764363 TCTATCAATTGCTCGATAGTAATTTGT 57.236 29.630 0.00 0.00 43.07 2.83
68 69 8.262715 TCAATTGCTCGATAGTAATTTGTTCA 57.737 30.769 0.00 0.00 43.07 3.18
69 70 8.175069 TCAATTGCTCGATAGTAATTTGTTCAC 58.825 33.333 0.00 0.00 43.07 3.18
70 71 6.417191 TTGCTCGATAGTAATTTGTTCACC 57.583 37.500 0.00 0.00 37.40 4.02
71 72 4.873827 TGCTCGATAGTAATTTGTTCACCC 59.126 41.667 0.00 0.00 37.40 4.61
72 73 4.873827 GCTCGATAGTAATTTGTTCACCCA 59.126 41.667 0.00 0.00 37.40 4.51
73 74 5.220605 GCTCGATAGTAATTTGTTCACCCAC 60.221 44.000 0.00 0.00 37.40 4.61
74 75 5.180271 TCGATAGTAATTTGTTCACCCACC 58.820 41.667 0.00 0.00 37.40 4.61
75 76 4.033587 CGATAGTAATTTGTTCACCCACCG 59.966 45.833 0.00 0.00 0.00 4.94
76 77 3.217681 AGTAATTTGTTCACCCACCGT 57.782 42.857 0.00 0.00 0.00 4.83
77 78 4.354893 AGTAATTTGTTCACCCACCGTA 57.645 40.909 0.00 0.00 0.00 4.02
78 79 4.716794 AGTAATTTGTTCACCCACCGTAA 58.283 39.130 0.00 0.00 0.00 3.18
79 80 5.318630 AGTAATTTGTTCACCCACCGTAAT 58.681 37.500 0.00 0.00 0.00 1.89
80 81 6.474630 AGTAATTTGTTCACCCACCGTAATA 58.525 36.000 0.00 0.00 0.00 0.98
81 82 5.632244 AATTTGTTCACCCACCGTAATAC 57.368 39.130 0.00 0.00 0.00 1.89
82 83 4.354893 TTTGTTCACCCACCGTAATACT 57.645 40.909 0.00 0.00 0.00 2.12
83 84 4.354893 TTGTTCACCCACCGTAATACTT 57.645 40.909 0.00 0.00 0.00 2.24
84 85 5.480642 TTGTTCACCCACCGTAATACTTA 57.519 39.130 0.00 0.00 0.00 2.24
85 86 5.680594 TGTTCACCCACCGTAATACTTAT 57.319 39.130 0.00 0.00 0.00 1.73
86 87 5.421277 TGTTCACCCACCGTAATACTTATG 58.579 41.667 0.00 0.00 0.00 1.90
87 88 5.187381 TGTTCACCCACCGTAATACTTATGA 59.813 40.000 0.00 0.00 0.00 2.15
88 89 6.126997 TGTTCACCCACCGTAATACTTATGAT 60.127 38.462 0.00 0.00 0.00 2.45
89 90 7.069702 TGTTCACCCACCGTAATACTTATGATA 59.930 37.037 0.00 0.00 0.00 2.15
90 91 7.786046 TCACCCACCGTAATACTTATGATAT 57.214 36.000 0.00 0.00 0.00 1.63
91 92 8.197592 TCACCCACCGTAATACTTATGATATT 57.802 34.615 0.00 0.00 0.00 1.28
92 93 8.653191 TCACCCACCGTAATACTTATGATATTT 58.347 33.333 0.00 0.00 0.00 1.40
93 94 9.280174 CACCCACCGTAATACTTATGATATTTT 57.720 33.333 0.00 0.00 0.00 1.82
94 95 9.280174 ACCCACCGTAATACTTATGATATTTTG 57.720 33.333 0.00 0.00 0.00 2.44
95 96 9.496873 CCCACCGTAATACTTATGATATTTTGA 57.503 33.333 0.00 0.00 0.00 2.69
105 106 8.443953 ACTTATGATATTTTGAGAGAAGCCAC 57.556 34.615 0.00 0.00 0.00 5.01
106 107 8.270744 ACTTATGATATTTTGAGAGAAGCCACT 58.729 33.333 0.00 0.00 0.00 4.00
107 108 9.770097 CTTATGATATTTTGAGAGAAGCCACTA 57.230 33.333 0.00 0.00 0.00 2.74
108 109 9.770097 TTATGATATTTTGAGAGAAGCCACTAG 57.230 33.333 0.00 0.00 0.00 2.57
109 110 7.187824 TGATATTTTGAGAGAAGCCACTAGT 57.812 36.000 0.00 0.00 0.00 2.57
110 111 7.044181 TGATATTTTGAGAGAAGCCACTAGTG 58.956 38.462 16.34 16.34 0.00 2.74
111 112 4.955811 TTTTGAGAGAAGCCACTAGTGA 57.044 40.909 24.68 0.00 0.00 3.41
112 113 4.955811 TTTGAGAGAAGCCACTAGTGAA 57.044 40.909 24.68 4.14 0.00 3.18
113 114 4.955811 TTGAGAGAAGCCACTAGTGAAA 57.044 40.909 24.68 1.93 0.00 2.69
114 115 4.258702 TGAGAGAAGCCACTAGTGAAAC 57.741 45.455 24.68 12.76 0.00 2.78
115 116 3.006967 TGAGAGAAGCCACTAGTGAAACC 59.993 47.826 24.68 10.28 37.80 3.27
116 117 3.243724 AGAGAAGCCACTAGTGAAACCT 58.756 45.455 24.68 14.61 37.80 3.50
117 118 4.417437 AGAGAAGCCACTAGTGAAACCTA 58.583 43.478 24.68 0.00 37.80 3.08
118 119 5.026790 AGAGAAGCCACTAGTGAAACCTAT 58.973 41.667 24.68 9.95 37.80 2.57
119 120 5.091261 AGAAGCCACTAGTGAAACCTATG 57.909 43.478 24.68 5.82 37.80 2.23
120 121 3.914426 AGCCACTAGTGAAACCTATGG 57.086 47.619 24.68 5.15 37.80 2.74
121 122 2.289565 GCCACTAGTGAAACCTATGGC 58.710 52.381 24.68 11.74 43.89 4.40
122 123 2.919228 CCACTAGTGAAACCTATGGCC 58.081 52.381 24.68 0.00 37.80 5.36
123 124 2.421529 CCACTAGTGAAACCTATGGCCC 60.422 54.545 24.68 0.00 37.80 5.80
124 125 1.844497 ACTAGTGAAACCTATGGCCCC 59.156 52.381 0.00 0.00 37.80 5.80
125 126 1.143073 CTAGTGAAACCTATGGCCCCC 59.857 57.143 0.00 0.00 37.80 5.40
126 127 1.453197 GTGAAACCTATGGCCCCCG 60.453 63.158 0.00 0.00 0.00 5.73
127 128 2.194868 GAAACCTATGGCCCCCGG 59.805 66.667 0.00 0.00 0.00 5.73
128 129 3.425925 AAACCTATGGCCCCCGGG 61.426 66.667 15.80 15.80 38.57 5.73
129 130 4.771745 AACCTATGGCCCCCGGGT 62.772 66.667 21.85 1.96 37.65 5.28
131 132 4.900259 CCTATGGCCCCCGGGTCT 62.900 72.222 21.85 0.94 41.25 3.85
132 133 2.203182 CTATGGCCCCCGGGTCTA 59.797 66.667 21.85 9.28 41.25 2.59
133 134 1.229529 CTATGGCCCCCGGGTCTAT 60.230 63.158 21.85 16.13 41.25 1.98
134 135 0.840722 CTATGGCCCCCGGGTCTATT 60.841 60.000 21.85 3.54 41.25 1.73
135 136 0.402272 TATGGCCCCCGGGTCTATTT 60.402 55.000 21.85 1.76 41.25 1.40
136 137 1.293683 ATGGCCCCCGGGTCTATTTT 61.294 55.000 21.85 0.00 41.25 1.82
137 138 1.152819 GGCCCCCGGGTCTATTTTC 60.153 63.158 21.85 0.00 36.84 2.29
138 139 1.152819 GCCCCCGGGTCTATTTTCC 60.153 63.158 21.85 0.00 37.65 3.13
139 140 1.928714 GCCCCCGGGTCTATTTTCCA 61.929 60.000 21.85 0.00 37.65 3.53
140 141 0.850784 CCCCCGGGTCTATTTTCCAT 59.149 55.000 21.85 0.00 0.00 3.41
141 142 1.202891 CCCCCGGGTCTATTTTCCATC 60.203 57.143 21.85 0.00 0.00 3.51
142 143 1.493022 CCCCGGGTCTATTTTCCATCA 59.507 52.381 21.85 0.00 0.00 3.07
143 144 2.108250 CCCCGGGTCTATTTTCCATCAT 59.892 50.000 21.85 0.00 0.00 2.45
144 145 3.329520 CCCCGGGTCTATTTTCCATCATA 59.670 47.826 21.85 0.00 0.00 2.15
145 146 4.324267 CCCGGGTCTATTTTCCATCATAC 58.676 47.826 14.18 0.00 0.00 2.39
146 147 4.202419 CCCGGGTCTATTTTCCATCATACA 60.202 45.833 14.18 0.00 0.00 2.29
147 148 5.373222 CCGGGTCTATTTTCCATCATACAA 58.627 41.667 0.00 0.00 0.00 2.41
148 149 5.470098 CCGGGTCTATTTTCCATCATACAAG 59.530 44.000 0.00 0.00 0.00 3.16
149 150 6.055588 CGGGTCTATTTTCCATCATACAAGT 58.944 40.000 0.00 0.00 0.00 3.16
150 151 6.542370 CGGGTCTATTTTCCATCATACAAGTT 59.458 38.462 0.00 0.00 0.00 2.66
151 152 7.067008 CGGGTCTATTTTCCATCATACAAGTTT 59.933 37.037 0.00 0.00 0.00 2.66
152 153 8.406297 GGGTCTATTTTCCATCATACAAGTTTC 58.594 37.037 0.00 0.00 0.00 2.78
153 154 8.406297 GGTCTATTTTCCATCATACAAGTTTCC 58.594 37.037 0.00 0.00 0.00 3.13
154 155 8.956426 GTCTATTTTCCATCATACAAGTTTCCA 58.044 33.333 0.00 0.00 0.00 3.53
155 156 9.527157 TCTATTTTCCATCATACAAGTTTCCAA 57.473 29.630 0.00 0.00 0.00 3.53
253 254 8.846943 TCATCTCTATCAGATCTCACTCTTAC 57.153 38.462 0.00 0.00 40.20 2.34
254 255 8.435982 TCATCTCTATCAGATCTCACTCTTACA 58.564 37.037 0.00 0.00 40.20 2.41
255 256 9.065798 CATCTCTATCAGATCTCACTCTTACAA 57.934 37.037 0.00 0.00 40.20 2.41
256 257 8.675705 TCTCTATCAGATCTCACTCTTACAAG 57.324 38.462 0.00 0.00 0.00 3.16
257 258 8.271458 TCTCTATCAGATCTCACTCTTACAAGT 58.729 37.037 0.00 0.00 0.00 3.16
258 259 8.219546 TCTATCAGATCTCACTCTTACAAGTG 57.780 38.462 0.00 0.00 46.54 3.16
259 260 5.651387 TCAGATCTCACTCTTACAAGTGG 57.349 43.478 0.00 0.00 45.47 4.00
260 261 4.081972 TCAGATCTCACTCTTACAAGTGGC 60.082 45.833 0.00 0.00 45.47 5.01
261 262 3.196685 AGATCTCACTCTTACAAGTGGCC 59.803 47.826 0.00 0.00 45.47 5.36
262 263 1.272490 TCTCACTCTTACAAGTGGCCG 59.728 52.381 0.00 0.00 45.47 6.13
263 264 1.000955 CTCACTCTTACAAGTGGCCGT 59.999 52.381 0.00 0.00 45.47 5.68
264 265 1.148310 CACTCTTACAAGTGGCCGTG 58.852 55.000 0.00 0.00 42.42 4.94
265 266 1.045407 ACTCTTACAAGTGGCCGTGA 58.955 50.000 7.81 0.00 0.00 4.35
266 267 1.414919 ACTCTTACAAGTGGCCGTGAA 59.585 47.619 7.81 0.00 0.00 3.18
267 268 2.069273 CTCTTACAAGTGGCCGTGAAG 58.931 52.381 7.81 7.13 0.00 3.02
268 269 1.156736 CTTACAAGTGGCCGTGAAGG 58.843 55.000 7.81 0.00 44.97 3.46
269 270 0.250553 TTACAAGTGGCCGTGAAGGG 60.251 55.000 7.81 0.00 41.48 3.95
270 271 1.122632 TACAAGTGGCCGTGAAGGGA 61.123 55.000 7.81 0.00 41.48 4.20
271 272 1.002134 CAAGTGGCCGTGAAGGGAT 60.002 57.895 0.00 0.00 41.48 3.85
272 273 0.609131 CAAGTGGCCGTGAAGGGATT 60.609 55.000 0.00 0.00 41.48 3.01
273 274 0.609131 AAGTGGCCGTGAAGGGATTG 60.609 55.000 0.00 0.00 41.48 2.67
274 275 1.002624 GTGGCCGTGAAGGGATTGA 60.003 57.895 0.00 0.00 41.48 2.57
275 276 1.002624 TGGCCGTGAAGGGATTGAC 60.003 57.895 0.00 0.00 41.48 3.18
276 277 1.002624 GGCCGTGAAGGGATTGACA 60.003 57.895 0.00 0.00 41.48 3.58
277 278 0.608035 GGCCGTGAAGGGATTGACAA 60.608 55.000 0.00 0.00 41.48 3.18
278 279 0.521735 GCCGTGAAGGGATTGACAAC 59.478 55.000 0.00 0.00 41.48 3.32
279 280 0.796312 CCGTGAAGGGATTGACAACG 59.204 55.000 0.00 0.00 35.97 4.10
280 281 0.165944 CGTGAAGGGATTGACAACGC 59.834 55.000 0.00 0.00 0.00 4.84
281 282 0.521735 GTGAAGGGATTGACAACGCC 59.478 55.000 0.00 0.00 0.00 5.68
282 283 0.400213 TGAAGGGATTGACAACGCCT 59.600 50.000 8.38 0.00 0.00 5.52
283 284 1.202879 TGAAGGGATTGACAACGCCTT 60.203 47.619 8.38 0.00 0.00 4.35
284 285 1.886542 GAAGGGATTGACAACGCCTTT 59.113 47.619 6.12 6.12 0.00 3.11
285 286 2.871096 AGGGATTGACAACGCCTTTA 57.129 45.000 8.38 0.00 0.00 1.85
286 287 3.366052 AGGGATTGACAACGCCTTTAT 57.634 42.857 8.38 0.00 0.00 1.40
287 288 3.279434 AGGGATTGACAACGCCTTTATC 58.721 45.455 8.38 0.00 0.00 1.75
288 289 2.031683 GGGATTGACAACGCCTTTATCG 59.968 50.000 8.38 0.00 0.00 2.92
289 290 2.538939 GGATTGACAACGCCTTTATCGC 60.539 50.000 0.00 0.00 0.00 4.58
295 296 3.481661 CGCCTTTATCGCGTTGGT 58.518 55.556 5.77 0.00 44.55 3.67
296 297 1.791662 CGCCTTTATCGCGTTGGTT 59.208 52.632 5.77 0.00 44.55 3.67
297 298 0.520412 CGCCTTTATCGCGTTGGTTG 60.520 55.000 5.77 0.00 44.55 3.77
298 299 0.796870 GCCTTTATCGCGTTGGTTGC 60.797 55.000 5.77 0.00 0.00 4.17
305 306 2.251371 GCGTTGGTTGCGAGGTTC 59.749 61.111 0.00 0.00 0.00 3.62
306 307 2.251642 GCGTTGGTTGCGAGGTTCT 61.252 57.895 0.00 0.00 0.00 3.01
307 308 1.782028 GCGTTGGTTGCGAGGTTCTT 61.782 55.000 0.00 0.00 0.00 2.52
308 309 1.504359 CGTTGGTTGCGAGGTTCTTA 58.496 50.000 0.00 0.00 0.00 2.10
309 310 2.073816 CGTTGGTTGCGAGGTTCTTAT 58.926 47.619 0.00 0.00 0.00 1.73
310 311 2.482721 CGTTGGTTGCGAGGTTCTTATT 59.517 45.455 0.00 0.00 0.00 1.40
311 312 3.058501 CGTTGGTTGCGAGGTTCTTATTT 60.059 43.478 0.00 0.00 0.00 1.40
312 313 4.226761 GTTGGTTGCGAGGTTCTTATTTG 58.773 43.478 0.00 0.00 0.00 2.32
313 314 3.482436 TGGTTGCGAGGTTCTTATTTGT 58.518 40.909 0.00 0.00 0.00 2.83
314 315 3.886505 TGGTTGCGAGGTTCTTATTTGTT 59.113 39.130 0.00 0.00 0.00 2.83
315 316 4.339814 TGGTTGCGAGGTTCTTATTTGTTT 59.660 37.500 0.00 0.00 0.00 2.83
316 317 4.679654 GGTTGCGAGGTTCTTATTTGTTTG 59.320 41.667 0.00 0.00 0.00 2.93
317 318 5.278604 GTTGCGAGGTTCTTATTTGTTTGT 58.721 37.500 0.00 0.00 0.00 2.83
318 319 4.854399 TGCGAGGTTCTTATTTGTTTGTG 58.146 39.130 0.00 0.00 0.00 3.33
319 320 4.336993 TGCGAGGTTCTTATTTGTTTGTGT 59.663 37.500 0.00 0.00 0.00 3.72
320 321 5.527951 TGCGAGGTTCTTATTTGTTTGTGTA 59.472 36.000 0.00 0.00 0.00 2.90
321 322 6.077838 GCGAGGTTCTTATTTGTTTGTGTAG 58.922 40.000 0.00 0.00 0.00 2.74
322 323 6.599437 CGAGGTTCTTATTTGTTTGTGTAGG 58.401 40.000 0.00 0.00 0.00 3.18
323 324 6.204108 CGAGGTTCTTATTTGTTTGTGTAGGT 59.796 38.462 0.00 0.00 0.00 3.08
324 325 7.385752 CGAGGTTCTTATTTGTTTGTGTAGGTA 59.614 37.037 0.00 0.00 0.00 3.08
325 326 8.387190 AGGTTCTTATTTGTTTGTGTAGGTAC 57.613 34.615 0.00 0.00 0.00 3.34
326 327 7.172019 AGGTTCTTATTTGTTTGTGTAGGTACG 59.828 37.037 0.00 0.00 0.00 3.67
327 328 7.171337 GGTTCTTATTTGTTTGTGTAGGTACGA 59.829 37.037 0.00 0.00 0.00 3.43
328 329 7.878477 TCTTATTTGTTTGTGTAGGTACGAG 57.122 36.000 0.00 0.00 0.00 4.18
329 330 6.869913 TCTTATTTGTTTGTGTAGGTACGAGG 59.130 38.462 0.00 0.00 0.00 4.63
330 331 4.405116 TTTGTTTGTGTAGGTACGAGGT 57.595 40.909 0.00 0.00 0.00 3.85
331 332 3.374220 TGTTTGTGTAGGTACGAGGTG 57.626 47.619 0.00 0.00 0.00 4.00
332 333 2.957680 TGTTTGTGTAGGTACGAGGTGA 59.042 45.455 0.00 0.00 0.00 4.02
333 334 3.243501 TGTTTGTGTAGGTACGAGGTGAC 60.244 47.826 0.00 0.00 0.00 3.67
346 347 4.702081 GTGACTCGCGCGTGGTCT 62.702 66.667 36.13 21.18 0.00 3.85
347 348 4.400109 TGACTCGCGCGTGGTCTC 62.400 66.667 36.13 26.21 0.00 3.36
350 351 3.506096 CTCGCGCGTGGTCTCCTA 61.506 66.667 30.98 5.69 0.00 2.94
351 352 3.736482 CTCGCGCGTGGTCTCCTAC 62.736 68.421 30.98 0.00 0.00 3.18
352 353 3.812019 CGCGCGTGGTCTCCTACT 61.812 66.667 24.19 0.00 0.00 2.57
353 354 2.466982 CGCGCGTGGTCTCCTACTA 61.467 63.158 24.19 0.00 0.00 1.82
354 355 1.355916 GCGCGTGGTCTCCTACTAG 59.644 63.158 8.43 0.00 0.00 2.57
355 356 1.094073 GCGCGTGGTCTCCTACTAGA 61.094 60.000 8.43 0.00 0.00 2.43
356 357 1.595466 CGCGTGGTCTCCTACTAGAT 58.405 55.000 0.00 0.00 0.00 1.98
357 358 1.948145 CGCGTGGTCTCCTACTAGATT 59.052 52.381 0.00 0.00 0.00 2.40
358 359 2.287069 CGCGTGGTCTCCTACTAGATTG 60.287 54.545 0.00 0.00 0.00 2.67
359 360 2.950309 GCGTGGTCTCCTACTAGATTGA 59.050 50.000 0.00 0.00 0.00 2.57
360 361 3.570550 GCGTGGTCTCCTACTAGATTGAT 59.429 47.826 0.00 0.00 0.00 2.57
361 362 4.760715 GCGTGGTCTCCTACTAGATTGATA 59.239 45.833 0.00 0.00 0.00 2.15
362 363 5.335035 GCGTGGTCTCCTACTAGATTGATAC 60.335 48.000 0.00 0.00 0.00 2.24
363 364 5.181622 CGTGGTCTCCTACTAGATTGATACC 59.818 48.000 0.00 2.65 0.00 2.73
364 365 6.308566 GTGGTCTCCTACTAGATTGATACCT 58.691 44.000 0.00 0.00 0.00 3.08
365 366 6.778559 GTGGTCTCCTACTAGATTGATACCTT 59.221 42.308 0.00 0.00 0.00 3.50
366 367 7.005296 TGGTCTCCTACTAGATTGATACCTTC 58.995 42.308 0.00 0.00 0.00 3.46
367 368 6.149807 GGTCTCCTACTAGATTGATACCTTCG 59.850 46.154 0.00 0.00 0.00 3.79
368 369 6.711645 GTCTCCTACTAGATTGATACCTTCGT 59.288 42.308 0.00 0.00 0.00 3.85
369 370 7.229106 GTCTCCTACTAGATTGATACCTTCGTT 59.771 40.741 0.00 0.00 0.00 3.85
370 371 7.444792 TCTCCTACTAGATTGATACCTTCGTTC 59.555 40.741 0.00 0.00 0.00 3.95
371 372 7.288560 TCCTACTAGATTGATACCTTCGTTCT 58.711 38.462 0.00 0.00 0.00 3.01
372 373 7.444792 TCCTACTAGATTGATACCTTCGTTCTC 59.555 40.741 0.00 0.00 0.00 2.87
373 374 7.228906 CCTACTAGATTGATACCTTCGTTCTCA 59.771 40.741 0.00 0.00 0.00 3.27
374 375 7.406031 ACTAGATTGATACCTTCGTTCTCAA 57.594 36.000 0.00 0.00 31.15 3.02
375 376 7.837863 ACTAGATTGATACCTTCGTTCTCAAA 58.162 34.615 0.00 0.00 30.69 2.69
376 377 8.311836 ACTAGATTGATACCTTCGTTCTCAAAA 58.688 33.333 0.00 0.00 30.69 2.44
377 378 7.979444 AGATTGATACCTTCGTTCTCAAAAA 57.021 32.000 0.00 0.00 30.69 1.94
378 379 7.807680 AGATTGATACCTTCGTTCTCAAAAAC 58.192 34.615 0.00 0.00 30.69 2.43
379 380 7.661847 AGATTGATACCTTCGTTCTCAAAAACT 59.338 33.333 0.00 0.00 30.69 2.66
380 381 6.539649 TGATACCTTCGTTCTCAAAAACTG 57.460 37.500 0.00 0.00 0.00 3.16
381 382 6.285224 TGATACCTTCGTTCTCAAAAACTGA 58.715 36.000 0.00 0.00 0.00 3.41
921 922 3.851128 GTCCCGCCCCTAGCAGTC 61.851 72.222 0.00 0.00 44.04 3.51
925 926 3.905678 CGCCCCTAGCAGTCGGAG 61.906 72.222 0.00 0.00 44.04 4.63
926 927 4.228567 GCCCCTAGCAGTCGGAGC 62.229 72.222 0.00 0.00 42.97 4.70
927 928 3.905678 CCCCTAGCAGTCGGAGCG 61.906 72.222 0.00 0.00 37.01 5.03
928 929 3.905678 CCCTAGCAGTCGGAGCGG 61.906 72.222 0.00 0.00 37.01 5.52
929 930 3.905678 CCTAGCAGTCGGAGCGGG 61.906 72.222 0.00 0.00 37.01 6.13
930 931 2.829003 CTAGCAGTCGGAGCGGGA 60.829 66.667 0.00 0.00 37.01 5.14
931 932 2.829003 TAGCAGTCGGAGCGGGAG 60.829 66.667 0.00 0.00 37.01 4.30
932 933 3.339738 TAGCAGTCGGAGCGGGAGA 62.340 63.158 0.00 0.00 37.01 3.71
933 934 4.500116 GCAGTCGGAGCGGGAGAC 62.500 72.222 0.00 0.00 35.30 3.36
934 935 2.752238 CAGTCGGAGCGGGAGACT 60.752 66.667 2.23 2.23 45.07 3.24
935 936 2.752238 AGTCGGAGCGGGAGACTG 60.752 66.667 6.42 0.00 42.87 3.51
936 937 3.827898 GTCGGAGCGGGAGACTGG 61.828 72.222 0.00 0.00 37.13 4.00
941 942 3.374402 AGCGGGAGACTGGTCGTG 61.374 66.667 0.00 0.00 46.69 4.35
943 944 4.778415 CGGGAGACTGGTCGTGCG 62.778 72.222 0.00 0.00 34.09 5.34
944 945 4.436998 GGGAGACTGGTCGTGCGG 62.437 72.222 0.00 0.00 34.09 5.69
945 946 3.371063 GGAGACTGGTCGTGCGGA 61.371 66.667 0.00 0.00 34.09 5.54
946 947 2.126424 GAGACTGGTCGTGCGGAC 60.126 66.667 0.00 0.00 45.31 4.79
947 948 2.597805 AGACTGGTCGTGCGGACT 60.598 61.111 5.27 0.00 45.35 3.85
948 949 2.430921 GACTGGTCGTGCGGACTG 60.431 66.667 5.27 0.00 45.35 3.51
949 950 3.208884 GACTGGTCGTGCGGACTGT 62.209 63.158 5.27 7.02 45.35 3.55
950 951 2.430921 CTGGTCGTGCGGACTGTC 60.431 66.667 5.27 0.00 45.35 3.51
951 952 3.916392 CTGGTCGTGCGGACTGTCC 62.916 68.421 16.99 16.99 45.35 4.02
952 953 3.681835 GGTCGTGCGGACTGTCCT 61.682 66.667 23.49 0.00 45.35 3.85
953 954 2.126424 GTCGTGCGGACTGTCCTC 60.126 66.667 23.49 16.99 42.62 3.71
954 955 3.733960 TCGTGCGGACTGTCCTCG 61.734 66.667 23.49 22.03 33.30 4.63
955 956 3.733960 CGTGCGGACTGTCCTCGA 61.734 66.667 23.49 5.34 33.30 4.04
956 957 2.649034 GTGCGGACTGTCCTCGAA 59.351 61.111 23.49 4.18 33.30 3.71
957 958 1.444553 GTGCGGACTGTCCTCGAAG 60.445 63.158 23.49 9.50 33.30 3.79
958 959 1.901948 TGCGGACTGTCCTCGAAGT 60.902 57.895 23.49 0.00 33.30 3.01
959 960 1.289380 GCGGACTGTCCTCGAAGTT 59.711 57.895 23.49 0.00 33.30 2.66
960 961 1.009389 GCGGACTGTCCTCGAAGTTG 61.009 60.000 23.49 7.42 33.30 3.16
961 962 0.314302 CGGACTGTCCTCGAAGTTGT 59.686 55.000 23.49 0.00 33.30 3.32
962 963 1.666311 CGGACTGTCCTCGAAGTTGTC 60.666 57.143 23.49 0.00 33.30 3.18
963 964 1.340248 GGACTGTCCTCGAAGTTGTCA 59.660 52.381 19.53 0.00 32.53 3.58
964 965 2.223971 GGACTGTCCTCGAAGTTGTCAA 60.224 50.000 19.53 0.00 32.53 3.18
965 966 3.454375 GACTGTCCTCGAAGTTGTCAAA 58.546 45.455 0.00 0.00 0.00 2.69
966 967 4.058817 GACTGTCCTCGAAGTTGTCAAAT 58.941 43.478 0.00 0.00 0.00 2.32
967 968 5.209818 ACTGTCCTCGAAGTTGTCAAATA 57.790 39.130 0.00 0.00 0.00 1.40
968 969 5.230942 ACTGTCCTCGAAGTTGTCAAATAG 58.769 41.667 0.00 0.00 0.00 1.73
969 970 5.010719 ACTGTCCTCGAAGTTGTCAAATAGA 59.989 40.000 0.00 0.00 0.00 1.98
970 971 5.470368 TGTCCTCGAAGTTGTCAAATAGAG 58.530 41.667 9.93 9.93 0.00 2.43
971 972 4.865365 GTCCTCGAAGTTGTCAAATAGAGG 59.135 45.833 21.77 21.77 43.80 3.69
972 973 5.073311 CCTCGAAGTTGTCAAATAGAGGA 57.927 43.478 22.66 4.25 44.87 3.71
973 974 5.422331 TCCTCGAAGTTGTCAAATAGAGGAT 59.578 40.000 24.35 0.00 45.43 3.24
974 975 6.070767 TCCTCGAAGTTGTCAAATAGAGGATT 60.071 38.462 24.35 0.00 45.43 3.01
975 976 6.036517 CCTCGAAGTTGTCAAATAGAGGATTG 59.963 42.308 22.66 5.42 44.87 2.67
976 977 6.697395 TCGAAGTTGTCAAATAGAGGATTGA 58.303 36.000 0.00 0.00 33.37 2.57
977 978 6.813649 TCGAAGTTGTCAAATAGAGGATTGAG 59.186 38.462 0.00 0.00 36.31 3.02
978 979 6.813649 CGAAGTTGTCAAATAGAGGATTGAGA 59.186 38.462 0.00 0.00 36.31 3.27
979 980 7.331934 CGAAGTTGTCAAATAGAGGATTGAGAA 59.668 37.037 0.00 0.00 36.73 2.87
980 981 9.171877 GAAGTTGTCAAATAGAGGATTGAGAAT 57.828 33.333 2.16 0.00 39.84 2.40
993 994 9.558396 AGAGGATTGAGAATAAATCAACTCATC 57.442 33.333 0.00 0.00 38.79 2.92
994 995 8.688747 AGGATTGAGAATAAATCAACTCATCC 57.311 34.615 0.98 0.98 38.79 3.51
995 996 7.723172 AGGATTGAGAATAAATCAACTCATCCC 59.277 37.037 3.51 0.00 38.79 3.85
996 997 7.503566 GGATTGAGAATAAATCAACTCATCCCA 59.496 37.037 0.00 0.00 38.79 4.37
997 998 8.827832 ATTGAGAATAAATCAACTCATCCCAA 57.172 30.769 0.00 0.00 38.79 4.12
998 999 8.648698 TTGAGAATAAATCAACTCATCCCAAA 57.351 30.769 0.00 0.00 38.79 3.28
999 1000 8.827832 TGAGAATAAATCAACTCATCCCAAAT 57.172 30.769 0.00 0.00 35.01 2.32
1000 1001 9.919416 TGAGAATAAATCAACTCATCCCAAATA 57.081 29.630 0.00 0.00 35.01 1.40
1012 1013 3.358111 TCCCAAATATGTTCGAAGCCA 57.642 42.857 0.00 0.00 0.00 4.75
1013 1014 3.278574 TCCCAAATATGTTCGAAGCCAG 58.721 45.455 0.00 0.00 0.00 4.85
1050 1051 6.207928 CAGTGATTTTGTTGATGCAAGTACA 58.792 36.000 0.00 0.00 0.00 2.90
1108 1109 0.323629 ACTGGTACACCCCATTGTCG 59.676 55.000 0.00 0.00 33.00 4.35
1112 1113 0.611714 GTACACCCCATTGTCGAGGT 59.388 55.000 0.00 0.00 0.00 3.85
1178 1179 2.315925 TCCGATGAGTTCTTGGATGC 57.684 50.000 0.00 0.00 0.00 3.91
1216 1217 1.118965 TGACCTCGAGGCCAAGAACA 61.119 55.000 31.56 15.84 39.32 3.18
1258 1259 1.827969 AGGTGATGACGAAGGAGGAAG 59.172 52.381 0.00 0.00 0.00 3.46
1350 1351 5.009410 ACTTGCTTTAGATCCTAATGCATGC 59.991 40.000 24.04 11.82 37.41 4.06
1439 1440 4.319766 GGCGCAAATAACAGATGTATGAGG 60.320 45.833 10.83 0.00 0.00 3.86
1440 1441 4.273480 GCGCAAATAACAGATGTATGAGGT 59.727 41.667 0.30 0.00 0.00 3.85
1451 1452 0.107654 GTATGAGGTCCCCACTGTGC 60.108 60.000 1.29 0.00 0.00 4.57
1517 1528 2.883888 GATGGTGCCATTACCTGTTGGT 60.884 50.000 5.08 0.00 42.46 3.67
1531 1542 5.842907 ACCTGTTGGTTAAGCAGAATTTTC 58.157 37.500 7.51 0.00 46.05 2.29
1553 1564 7.986085 TTCTTGAAGTTAAAGATGAAGAGGG 57.014 36.000 3.37 0.00 33.79 4.30
1649 1660 9.822185 TGTGAGTGCATACATCATATATTATCC 57.178 33.333 0.00 0.00 0.00 2.59
1697 1708 7.298854 GTTTGTAATCTTTGGCTGTCTTCTAC 58.701 38.462 0.00 0.00 0.00 2.59
1710 1721 5.407995 GCTGTCTTCTACATTATGGAGATGC 59.592 44.000 8.09 7.63 37.15 3.91
1717 1736 7.792374 TCTACATTATGGAGATGCTTTGTTC 57.208 36.000 2.46 0.00 30.99 3.18
1781 1800 6.049955 TGTACTTTCTCAATGGACTTAGGG 57.950 41.667 0.00 0.00 0.00 3.53
1799 1818 9.127277 GACTTAGGGTTAAAACATATATTGCCA 57.873 33.333 0.00 0.00 0.00 4.92
1813 1832 9.461312 ACATATATTGCCACTTGAAGAAAACTA 57.539 29.630 0.00 0.00 0.00 2.24
1820 1839 5.643777 GCCACTTGAAGAAAACTATAGAGCA 59.356 40.000 6.78 0.00 0.00 4.26
1823 1842 7.185453 CACTTGAAGAAAACTATAGAGCATGC 58.815 38.462 10.51 10.51 0.00 4.06
1834 1853 0.469070 AGAGCATGCCTGTCCTGATC 59.531 55.000 15.66 1.46 0.00 2.92
1866 1885 8.713708 TGTTAACTTCCCAAAATTCCTGATTA 57.286 30.769 7.22 0.00 0.00 1.75
1957 1976 8.603181 CCATTTTAAATTTGCTGTAATACAGGC 58.397 33.333 20.56 13.47 46.01 4.85
1980 1999 3.386078 TCAGCTGCCTTCATAGGTAAGAG 59.614 47.826 9.47 0.00 44.00 2.85
2001 2020 4.415596 AGTTAAGGCATTCCAACATTCCA 58.584 39.130 0.00 0.00 33.74 3.53
2008 2027 3.055963 GCATTCCAACATTCCATGACCAA 60.056 43.478 0.00 0.00 0.00 3.67
2059 2078 8.502387 GTTGATTGTCATCTGAATCTAATAGGC 58.498 37.037 0.00 0.00 31.07 3.93
2123 2142 7.419057 GGACTGGTCATCATTCTAAAGTGGATA 60.419 40.741 3.10 0.00 0.00 2.59
2212 2231 8.624776 TGTATCATAATTGTGTGTTGACAACAA 58.375 29.630 22.16 7.71 44.16 2.83
2422 2441 3.721087 ACCAGATAAAGGGTGTGAAGG 57.279 47.619 0.00 0.00 35.67 3.46
2544 2563 0.180406 GGAATGGTATGCACGGTCCT 59.820 55.000 0.00 0.00 0.00 3.85
2688 2714 4.010349 GGTTTGTTCCATCTCTTACTGGG 58.990 47.826 0.00 0.00 33.13 4.45
2703 2729 1.063717 ACTGGGCTGATTTACCATGGG 60.064 52.381 18.09 0.00 33.07 4.00
2812 2839 3.363627 TGGCCATGTCAGATGCAAAATA 58.636 40.909 0.00 0.00 0.00 1.40
2950 2977 6.464222 TCTATTCCTTATTAACATGCCTCCG 58.536 40.000 0.00 0.00 0.00 4.63
2956 2989 5.465724 CCTTATTAACATGCCTCCGTACTTC 59.534 44.000 0.00 0.00 0.00 3.01
3085 3118 1.538512 CTGGCAGAGTTGTGGTCATTG 59.461 52.381 9.42 0.00 0.00 2.82
3153 3186 3.986572 GAGTCATGGTATGATTCGCTGAG 59.013 47.826 0.00 0.00 42.04 3.35
3182 3215 1.589716 GCACTACTGGCTGCCCTTTG 61.590 60.000 17.53 6.38 0.00 2.77
3194 3227 0.541998 GCCCTTTGCCTTGGGTACTT 60.542 55.000 6.83 0.00 45.06 2.24
3231 3274 7.778382 GGAACCTTGGGTAATTTCTGTATATGT 59.222 37.037 0.00 0.00 33.12 2.29
3293 3375 4.037222 TGTTCATCAGTTGCTATCCCCTA 58.963 43.478 0.00 0.00 0.00 3.53
3295 3377 3.242867 TCATCAGTTGCTATCCCCTAGG 58.757 50.000 0.06 0.06 0.00 3.02
3377 3470 4.600692 TGTAGCAGTGTCTAGCTTTGAA 57.399 40.909 0.00 0.00 42.05 2.69
3425 3518 7.921304 TGGATGCCTAGATGTTGTATTGATAT 58.079 34.615 0.00 0.00 0.00 1.63
3426 3519 7.825761 TGGATGCCTAGATGTTGTATTGATATG 59.174 37.037 0.00 0.00 0.00 1.78
3427 3520 8.043113 GGATGCCTAGATGTTGTATTGATATGA 58.957 37.037 0.00 0.00 0.00 2.15
3522 3634 9.128107 GTGATTGACATTTGGTATTTAAGTGTG 57.872 33.333 0.00 0.00 29.65 3.82
3544 3656 8.894864 GTGTGTATTTTGGTTAAACGATACAAC 58.105 33.333 12.80 10.52 34.10 3.32
3553 3665 8.618702 TGGTTAAACGATACAACCAAATCTAA 57.381 30.769 8.73 0.00 46.58 2.10
3638 3750 8.299570 GTTCCCAAGCATAAATTATCTGGTATG 58.700 37.037 0.00 0.00 0.00 2.39
3669 3819 5.396484 CAACTCCACTATTCAATGCAACTG 58.604 41.667 0.00 0.00 0.00 3.16
3674 3824 6.108687 TCCACTATTCAATGCAACTGTAGAG 58.891 40.000 0.00 0.00 0.00 2.43
3679 3829 8.478066 ACTATTCAATGCAACTGTAGAGACATA 58.522 33.333 0.00 0.00 34.24 2.29
3682 3832 8.565896 TTCAATGCAACTGTAGAGACATATTT 57.434 30.769 0.00 0.00 34.24 1.40
3683 3833 8.565896 TCAATGCAACTGTAGAGACATATTTT 57.434 30.769 0.00 0.00 34.24 1.82
3705 3855 3.502123 TTTCCAAGTAACCTGACAGGG 57.498 47.619 25.34 7.84 40.58 4.45
3706 3856 1.358152 TCCAAGTAACCTGACAGGGG 58.642 55.000 25.34 15.12 40.58 4.79
3707 3857 0.322546 CCAAGTAACCTGACAGGGGC 60.323 60.000 25.34 14.08 40.58 5.80
3708 3858 0.673644 CAAGTAACCTGACAGGGGCG 60.674 60.000 25.34 4.07 40.58 6.13
3709 3859 0.834687 AAGTAACCTGACAGGGGCGA 60.835 55.000 25.34 4.72 40.58 5.54
3710 3860 0.834687 AGTAACCTGACAGGGGCGAA 60.835 55.000 25.34 3.14 40.58 4.70
3711 3861 0.391263 GTAACCTGACAGGGGCGAAG 60.391 60.000 25.34 0.00 40.58 3.79
3712 3862 1.550130 TAACCTGACAGGGGCGAAGG 61.550 60.000 25.34 0.00 40.58 3.46
3713 3863 4.101448 CCTGACAGGGGCGAAGGG 62.101 72.222 14.26 0.00 0.00 3.95
3714 3864 4.101448 CTGACAGGGGCGAAGGGG 62.101 72.222 0.00 0.00 0.00 4.79
3715 3865 4.649705 TGACAGGGGCGAAGGGGA 62.650 66.667 0.00 0.00 0.00 4.81
3716 3866 3.787001 GACAGGGGCGAAGGGGAG 61.787 72.222 0.00 0.00 0.00 4.30
3744 3894 3.733709 AGCAGTAAAGCTGTTGCCT 57.266 47.368 0.00 0.00 46.64 4.75
3745 3895 1.986882 AGCAGTAAAGCTGTTGCCTT 58.013 45.000 0.00 0.00 46.64 4.35
3746 3896 1.610522 AGCAGTAAAGCTGTTGCCTTG 59.389 47.619 0.00 0.00 46.64 3.61
3747 3897 1.338020 GCAGTAAAGCTGTTGCCTTGT 59.662 47.619 0.00 0.00 46.64 3.16
3748 3898 2.859806 GCAGTAAAGCTGTTGCCTTGTG 60.860 50.000 0.00 0.00 46.64 3.33
3749 3899 2.618241 CAGTAAAGCTGTTGCCTTGTGA 59.382 45.455 0.00 0.00 40.27 3.58
3750 3900 2.618709 AGTAAAGCTGTTGCCTTGTGAC 59.381 45.455 0.00 0.00 40.80 3.67
3751 3901 0.746659 AAAGCTGTTGCCTTGTGACC 59.253 50.000 0.00 0.00 40.80 4.02
3752 3902 0.395586 AAGCTGTTGCCTTGTGACCA 60.396 50.000 0.00 0.00 40.80 4.02
3753 3903 0.178981 AGCTGTTGCCTTGTGACCAT 60.179 50.000 0.00 0.00 40.80 3.55
3754 3904 0.675633 GCTGTTGCCTTGTGACCATT 59.324 50.000 0.00 0.00 0.00 3.16
3755 3905 1.885887 GCTGTTGCCTTGTGACCATTA 59.114 47.619 0.00 0.00 0.00 1.90
3756 3906 2.095059 GCTGTTGCCTTGTGACCATTAG 60.095 50.000 0.00 0.00 0.00 1.73
3757 3907 2.489329 CTGTTGCCTTGTGACCATTAGG 59.511 50.000 0.00 0.00 42.21 2.69
3768 3918 3.059603 CCATTAGGTCACGGGTTCG 57.940 57.895 0.00 0.00 43.02 3.95
3769 3919 0.533491 CCATTAGGTCACGGGTTCGA 59.467 55.000 0.00 0.00 40.11 3.71
3770 3920 1.470979 CCATTAGGTCACGGGTTCGAG 60.471 57.143 0.00 0.00 40.11 4.04
3771 3921 1.203994 CATTAGGTCACGGGTTCGAGT 59.796 52.381 0.00 0.00 40.11 4.18
3772 3922 0.883833 TTAGGTCACGGGTTCGAGTC 59.116 55.000 0.00 0.00 40.11 3.36
3773 3923 0.962356 TAGGTCACGGGTTCGAGTCC 60.962 60.000 0.82 0.82 40.11 3.85
3774 3924 2.273912 GGTCACGGGTTCGAGTCCT 61.274 63.158 8.28 0.00 40.11 3.85
3775 3925 1.080705 GTCACGGGTTCGAGTCCTG 60.081 63.158 13.65 13.65 40.11 3.86
3776 3926 2.261671 CACGGGTTCGAGTCCTGG 59.738 66.667 17.72 9.36 40.11 4.45
3777 3927 2.116772 ACGGGTTCGAGTCCTGGA 59.883 61.111 17.72 0.00 40.11 3.86
3778 3928 1.532316 ACGGGTTCGAGTCCTGGAA 60.532 57.895 17.72 0.00 40.11 3.53
3779 3929 1.117142 ACGGGTTCGAGTCCTGGAAA 61.117 55.000 17.72 0.00 40.11 3.13
3780 3930 0.669625 CGGGTTCGAGTCCTGGAAAC 60.670 60.000 0.00 0.00 39.00 2.78
3781 3931 0.395312 GGGTTCGAGTCCTGGAAACA 59.605 55.000 8.95 0.00 36.84 2.83
3792 3942 3.025924 TGGAAACAGCCTCTTGCAG 57.974 52.632 0.00 0.00 44.83 4.41
3793 3943 0.473755 TGGAAACAGCCTCTTGCAGA 59.526 50.000 0.00 0.00 44.83 4.26
3794 3944 1.133823 TGGAAACAGCCTCTTGCAGAA 60.134 47.619 0.00 0.00 44.83 3.02
3795 3945 1.956477 GGAAACAGCCTCTTGCAGAAA 59.044 47.619 0.00 0.00 44.83 2.52
3796 3946 2.560105 GGAAACAGCCTCTTGCAGAAAT 59.440 45.455 0.00 0.00 44.83 2.17
3797 3947 3.572584 GAAACAGCCTCTTGCAGAAATG 58.427 45.455 0.00 0.00 44.83 2.32
3798 3948 2.283145 ACAGCCTCTTGCAGAAATGT 57.717 45.000 0.00 0.00 44.83 2.71
3799 3949 3.423539 ACAGCCTCTTGCAGAAATGTA 57.576 42.857 0.00 0.00 44.83 2.29
3800 3950 3.341823 ACAGCCTCTTGCAGAAATGTAG 58.658 45.455 0.00 0.00 44.83 2.74
3801 3951 2.681848 CAGCCTCTTGCAGAAATGTAGG 59.318 50.000 0.00 0.00 44.83 3.18
3802 3952 2.019984 GCCTCTTGCAGAAATGTAGGG 58.980 52.381 0.00 0.00 40.77 3.53
3803 3953 2.356125 GCCTCTTGCAGAAATGTAGGGA 60.356 50.000 0.00 0.00 40.77 4.20
3804 3954 3.873801 GCCTCTTGCAGAAATGTAGGGAA 60.874 47.826 0.00 0.00 40.77 3.97
3805 3955 4.335416 CCTCTTGCAGAAATGTAGGGAAA 58.665 43.478 0.00 0.00 0.00 3.13
3806 3956 4.397417 CCTCTTGCAGAAATGTAGGGAAAG 59.603 45.833 0.00 0.00 0.00 2.62
3807 3957 4.335416 TCTTGCAGAAATGTAGGGAAAGG 58.665 43.478 0.00 0.00 0.00 3.11
3808 3958 2.446435 TGCAGAAATGTAGGGAAAGGC 58.554 47.619 0.00 0.00 0.00 4.35
3809 3959 2.041620 TGCAGAAATGTAGGGAAAGGCT 59.958 45.455 0.00 0.00 0.00 4.58
3810 3960 2.424956 GCAGAAATGTAGGGAAAGGCTG 59.575 50.000 0.00 0.00 0.00 4.85
3811 3961 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
3812 3962 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
3813 3963 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
3814 3964 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
3815 3965 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
3816 3966 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
3817 3967 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
3818 3968 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
3819 3969 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
3820 3970 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
3821 3971 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
3822 3972 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
3823 3973 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
3824 3974 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
3825 3975 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
3826 3976 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
3827 3977 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
3828 3978 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
3829 3979 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
3830 3980 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
3831 3981 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
3832 3982 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
3837 3987 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
3838 3988 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
3839 3989 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
3840 3990 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
3841 3991 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
3842 3992 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
3843 3993 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
3844 3994 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
3845 3995 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
3852 4002 4.735599 GACCCTTCCCCGGACCCT 62.736 72.222 0.73 0.00 0.00 4.34
3905 4055 1.182385 TTTTTAACCTGGCAGGGGCG 61.182 55.000 35.34 12.59 40.58 6.13
3914 4067 3.140141 GCAGGGGCGCTGCATTAA 61.140 61.111 40.82 0.00 46.19 1.40
3915 4068 2.800736 CAGGGGCGCTGCATTAAC 59.199 61.111 19.06 0.00 0.00 2.01
3918 4071 0.684153 AGGGGCGCTGCATTAACAAT 60.684 50.000 7.64 0.00 0.00 2.71
3995 4421 5.920273 CAGAACAATTACAACCCACATTGAC 59.080 40.000 0.00 0.00 33.57 3.18
4063 4496 4.408921 CCAGGACTTTATGGTAGATGTCCA 59.591 45.833 11.73 0.00 44.41 4.02
4266 5132 7.155655 TGTTTACTGAAATGCATGCTATGAA 57.844 32.000 20.33 0.00 0.00 2.57
4365 5427 4.163268 TCCTCCATTCCATAATTCGTGTCA 59.837 41.667 0.00 0.00 0.00 3.58
4366 5428 4.881273 CCTCCATTCCATAATTCGTGTCAA 59.119 41.667 0.00 0.00 0.00 3.18
4420 5532 4.448537 TGGTTTATTTTGCCTCCATTCG 57.551 40.909 0.00 0.00 0.00 3.34
4473 5588 0.820871 CTGGGAAAGGAGACGAGGAG 59.179 60.000 0.00 0.00 0.00 3.69
4506 5621 6.532826 AGAAGCTGATGAGAAGAAAAGAGTT 58.467 36.000 0.00 0.00 0.00 3.01
4513 5628 9.265901 CTGATGAGAAGAAAAGAGTTCTTGTTA 57.734 33.333 6.08 0.16 38.73 2.41
4537 5652 4.339872 TCAAAGCTTCATGCCATTTTGT 57.660 36.364 0.00 0.00 44.23 2.83
4564 5679 5.880332 CCATTCCTTTTAAGACGGATGAAGA 59.120 40.000 0.00 0.00 0.00 2.87
4575 5690 2.103771 ACGGATGAAGATGGATGTGGAG 59.896 50.000 0.00 0.00 0.00 3.86
4662 5777 7.587037 AATCCAGACTCACTTGATTGAAAAA 57.413 32.000 0.00 0.00 38.82 1.94
4742 5868 3.495193 CATCTTTTCCTGCACATTCACG 58.505 45.455 0.00 0.00 0.00 4.35
4803 5929 7.592885 ATGACAAGCTTTTCCTATATTGCAT 57.407 32.000 10.04 0.00 0.00 3.96
4821 5947 3.842925 TTGTTGCGGAGACCTGGCC 62.843 63.158 0.00 0.00 0.00 5.36
4937 6070 6.486657 CGTCCCATAATCCTATTGAACATGTT 59.513 38.462 11.78 11.78 0.00 2.71
4951 6084 5.527951 TGAACATGTTCTATTTGTGTTGCC 58.472 37.500 32.57 8.37 40.14 4.52
4959 6092 4.780815 TCTATTTGTGTTGCCCTCTATGG 58.219 43.478 0.00 0.00 0.00 2.74
5093 6227 5.280317 GGTTACTGGAATCCCTACTCAAACA 60.280 44.000 0.00 0.00 0.00 2.83
5249 6398 4.709397 TCACAGTGGACAAAAGTTTTGGAT 59.291 37.500 27.46 11.49 0.00 3.41
5492 7049 4.627035 TCGAGCTCAATAACACATGTTCAG 59.373 41.667 15.40 0.00 39.31 3.02
5534 7093 9.347240 AGCATTCTGAGCTATACATGTTAAATT 57.653 29.630 2.30 0.00 41.32 1.82
5657 7341 4.449743 TGTGTGGTAGCTTAAACACGATTC 59.550 41.667 16.13 3.03 44.62 2.52
5705 7391 2.558359 AGGTACTGTCATTTTGCTTGGC 59.442 45.455 0.00 0.00 37.18 4.52
5769 7475 8.165212 TGTTACAACGTGAATTAGTTATCTCG 57.835 34.615 0.00 0.00 38.22 4.04
5787 7493 1.880027 TCGCTGAAAGGAAAAAGCTCC 59.120 47.619 0.00 0.00 33.41 4.70
5827 7534 1.899814 TGCTACGGACTGGATGAAGTT 59.100 47.619 0.00 0.00 0.00 2.66
5842 7549 2.106338 TGAAGTTGCACATCCTTCTCCA 59.894 45.455 12.91 0.00 36.43 3.86
5888 7597 5.049167 GCTTGGACATGATTGAAAAACACA 58.951 37.500 0.00 0.00 28.93 3.72
5889 7598 5.050837 GCTTGGACATGATTGAAAAACACAC 60.051 40.000 0.00 0.00 28.93 3.82
5906 7615 4.338815 CTCACCCGAGTAGGCTCA 57.661 61.111 0.00 0.00 41.71 4.26
6102 8040 4.569719 ATCCCACTACAAACTGGTTAGG 57.430 45.455 0.00 0.00 0.00 2.69
6105 8043 3.326880 CCCACTACAAACTGGTTAGGTCT 59.673 47.826 0.00 0.00 0.00 3.85
6185 8130 5.764487 TGCACATGACTGTTTGTTATTGA 57.236 34.783 0.00 0.00 31.62 2.57
6195 8143 7.771361 TGACTGTTTGTTATTGAAGAACCAGTA 59.229 33.333 11.22 1.86 40.30 2.74
6206 8155 5.801380 TGAAGAACCAGTATTCTAACCCAC 58.199 41.667 0.00 0.00 37.99 4.61
6260 8487 7.262772 ACATGCCAATATTTCTCTGTTTGATG 58.737 34.615 0.00 0.00 0.00 3.07
6280 8507 7.528996 TGATGATTTAATGGCTTTCTATGGG 57.471 36.000 0.00 0.00 0.00 4.00
6629 8895 4.527816 TGAAAATGCCTGCCTTTCAGTTAT 59.472 37.500 10.65 0.00 41.25 1.89
6733 9002 0.887933 GATTGGTCAAACACGCCCAT 59.112 50.000 0.00 0.00 0.00 4.00
6783 9194 3.452627 ACTCTGTTGAGGTATGGATGGAC 59.547 47.826 0.00 0.00 44.29 4.02
6812 9223 6.582677 TCAGACTCTTGCTAGGCTATATTC 57.417 41.667 0.00 0.00 31.11 1.75
6825 9236 2.263077 CTATATTCCGTGGCATCGCTC 58.737 52.381 0.00 0.00 0.00 5.03
6836 9247 1.965754 GCATCGCTCCTCACCTCCTT 61.966 60.000 0.00 0.00 0.00 3.36
6921 9332 2.230660 GGGAAGGGACAGTTTGAACAG 58.769 52.381 0.00 0.00 0.00 3.16
6959 9371 8.880750 GCCTAACGTCTTAGATGTAAAGATTTT 58.119 33.333 7.58 0.00 35.53 1.82
6962 9374 6.990546 ACGTCTTAGATGTAAAGATTTTCGC 58.009 36.000 5.14 0.00 35.53 4.70
7009 9538 7.672738 AGTCTACTGCGTAAATTGTTTATTCG 58.327 34.615 0.00 0.00 0.00 3.34
7014 9543 6.799925 ACTGCGTAAATTGTTTATTCGGAAAG 59.200 34.615 0.00 0.00 0.00 2.62
7028 9557 6.954487 ATTCGGAAAGGAAACACTAAAAGT 57.046 33.333 0.00 0.00 0.00 2.66
7080 9704 4.627035 TGATCACTGATTTGTTCTGCTACG 59.373 41.667 0.00 0.00 0.00 3.51
7088 9712 5.238432 TGATTTGTTCTGCTACGTTGTTGAT 59.762 36.000 0.00 0.00 0.00 2.57
7350 9974 4.514577 CCGGCCTAGCAGTGACGG 62.515 72.222 0.00 0.00 35.01 4.79
7391 10019 2.047655 CGGCTTGGTCACCGCTAA 60.048 61.111 0.00 0.00 43.44 3.09
7396 10024 1.641577 CTTGGTCACCGCTAACTAGC 58.358 55.000 0.00 0.00 45.62 3.42
7407 10035 2.030946 CGCTAACTAGCTGATGTTTGGC 59.969 50.000 7.13 6.58 46.85 4.52
7409 10037 2.472695 AACTAGCTGATGTTTGGCGA 57.527 45.000 0.00 0.00 0.00 5.54
7412 10040 2.484264 ACTAGCTGATGTTTGGCGAAAC 59.516 45.455 16.51 16.51 41.72 2.78
7439 10069 3.133362 TCCGCCGAAGTAATTATTGACCT 59.867 43.478 0.00 0.00 0.00 3.85
7459 10089 4.259356 CCTCATGGCATATGTGATACAGG 58.741 47.826 0.00 0.06 0.00 4.00
7493 10123 7.168905 ACCTATCTCGAAAAGAATCCAAAAGT 58.831 34.615 0.00 0.00 37.61 2.66
7540 10170 3.890147 ACCCGTAGATTAGGTGCTCTAAG 59.110 47.826 6.34 0.00 40.85 2.18
7541 10171 3.890147 CCCGTAGATTAGGTGCTCTAAGT 59.110 47.826 6.34 0.75 40.85 2.24
7542 10172 5.068636 CCCGTAGATTAGGTGCTCTAAGTA 58.931 45.833 6.34 0.05 40.85 2.24
7543 10173 5.533903 CCCGTAGATTAGGTGCTCTAAGTAA 59.466 44.000 6.34 0.00 40.85 2.24
7585 10220 1.276989 CCATTTGCTTTGGGTCAGCAT 59.723 47.619 0.00 0.00 46.62 3.79
7586 10221 2.289819 CCATTTGCTTTGGGTCAGCATT 60.290 45.455 0.00 0.00 46.62 3.56
7587 10222 2.818130 TTTGCTTTGGGTCAGCATTC 57.182 45.000 0.00 0.00 46.62 2.67
7588 10223 1.702182 TTGCTTTGGGTCAGCATTCA 58.298 45.000 0.00 0.00 46.62 2.57
7589 10224 1.250328 TGCTTTGGGTCAGCATTCAG 58.750 50.000 0.00 0.00 42.49 3.02
7590 10225 0.108945 GCTTTGGGTCAGCATTCAGC 60.109 55.000 0.00 0.00 46.19 4.26
7643 10296 1.239347 GAAGGAGGTTGGAAGTGTGC 58.761 55.000 0.00 0.00 0.00 4.57
7733 10392 0.179084 ACATACATCTTGCCGGTCGG 60.179 55.000 1.90 4.85 38.57 4.79
7736 10395 0.108520 TACATCTTGCCGGTCGGAAC 60.109 55.000 14.15 0.00 37.50 3.62
7778 10446 1.079127 CGGCCAGTTCCTGTACCAG 60.079 63.158 2.24 0.00 0.00 4.00
7807 10475 4.500116 GGAGACGAGGCCGCTGAC 62.500 72.222 4.53 0.00 39.95 3.51
7945 10622 2.537714 ATCCTCACCTCGCCCTCCTT 62.538 60.000 0.00 0.00 0.00 3.36
7961 10638 1.990060 CTTCTCCTTCCCCTCGCCA 60.990 63.158 0.00 0.00 0.00 5.69
8014 10691 2.663188 GATCCCGCGCCTGATCAC 60.663 66.667 22.24 3.65 37.81 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.941664 CGAGCAATTGATAGAAAAGTGAATAAT 57.058 29.630 10.34 0.00 0.00 1.28
28 29 9.161629 TCGAGCAATTGATAGAAAAGTGAATAA 57.838 29.630 10.34 0.00 0.00 1.40
29 30 8.716646 TCGAGCAATTGATAGAAAAGTGAATA 57.283 30.769 10.34 0.00 0.00 1.75
30 31 7.615582 TCGAGCAATTGATAGAAAAGTGAAT 57.384 32.000 10.34 0.00 0.00 2.57
31 32 7.615582 ATCGAGCAATTGATAGAAAAGTGAA 57.384 32.000 10.55 0.00 0.00 3.18
32 33 7.981789 ACTATCGAGCAATTGATAGAAAAGTGA 59.018 33.333 17.94 1.20 44.37 3.41
33 34 8.136057 ACTATCGAGCAATTGATAGAAAAGTG 57.864 34.615 17.94 8.07 44.37 3.16
34 35 9.817809 TTACTATCGAGCAATTGATAGAAAAGT 57.182 29.630 20.55 20.55 44.37 2.66
39 40 9.764363 ACAAATTACTATCGAGCAATTGATAGA 57.236 29.630 10.34 9.58 44.37 1.98
42 43 8.892723 TGAACAAATTACTATCGAGCAATTGAT 58.107 29.630 10.34 1.34 0.00 2.57
43 44 8.175069 GTGAACAAATTACTATCGAGCAATTGA 58.825 33.333 10.34 0.00 0.00 2.57
44 45 7.429340 GGTGAACAAATTACTATCGAGCAATTG 59.571 37.037 0.00 0.00 0.00 2.32
45 46 7.415206 GGGTGAACAAATTACTATCGAGCAATT 60.415 37.037 0.00 0.00 0.00 2.32
46 47 6.038271 GGGTGAACAAATTACTATCGAGCAAT 59.962 38.462 0.00 0.00 0.00 3.56
47 48 5.353123 GGGTGAACAAATTACTATCGAGCAA 59.647 40.000 0.00 0.00 0.00 3.91
48 49 4.873827 GGGTGAACAAATTACTATCGAGCA 59.126 41.667 0.00 0.00 0.00 4.26
49 50 4.873827 TGGGTGAACAAATTACTATCGAGC 59.126 41.667 0.00 0.00 0.00 5.03
50 51 5.293569 GGTGGGTGAACAAATTACTATCGAG 59.706 44.000 0.00 0.00 0.00 4.04
51 52 5.180271 GGTGGGTGAACAAATTACTATCGA 58.820 41.667 0.00 0.00 0.00 3.59
52 53 4.033587 CGGTGGGTGAACAAATTACTATCG 59.966 45.833 0.00 0.00 0.00 2.92
53 54 4.939439 ACGGTGGGTGAACAAATTACTATC 59.061 41.667 0.00 0.00 0.00 2.08
54 55 4.913784 ACGGTGGGTGAACAAATTACTAT 58.086 39.130 0.00 0.00 0.00 2.12
55 56 4.354893 ACGGTGGGTGAACAAATTACTA 57.645 40.909 0.00 0.00 0.00 1.82
56 57 3.217681 ACGGTGGGTGAACAAATTACT 57.782 42.857 0.00 0.00 0.00 2.24
57 58 5.632244 ATTACGGTGGGTGAACAAATTAC 57.368 39.130 0.00 0.00 0.00 1.89
58 59 6.474630 AGTATTACGGTGGGTGAACAAATTA 58.525 36.000 0.00 0.00 0.00 1.40
59 60 5.318630 AGTATTACGGTGGGTGAACAAATT 58.681 37.500 0.00 0.00 0.00 1.82
60 61 4.913784 AGTATTACGGTGGGTGAACAAAT 58.086 39.130 0.00 0.00 0.00 2.32
61 62 4.354893 AGTATTACGGTGGGTGAACAAA 57.645 40.909 0.00 0.00 0.00 2.83
62 63 4.354893 AAGTATTACGGTGGGTGAACAA 57.645 40.909 0.00 0.00 0.00 2.83
63 64 5.187381 TCATAAGTATTACGGTGGGTGAACA 59.813 40.000 0.00 0.00 30.46 3.18
64 65 5.663456 TCATAAGTATTACGGTGGGTGAAC 58.337 41.667 0.00 0.00 30.46 3.18
65 66 5.936187 TCATAAGTATTACGGTGGGTGAA 57.064 39.130 0.00 0.00 30.46 3.18
66 67 7.786046 ATATCATAAGTATTACGGTGGGTGA 57.214 36.000 0.00 0.00 30.46 4.02
67 68 8.842358 AAATATCATAAGTATTACGGTGGGTG 57.158 34.615 0.00 0.00 30.46 4.61
68 69 9.280174 CAAAATATCATAAGTATTACGGTGGGT 57.720 33.333 0.00 0.00 30.46 4.51
69 70 9.496873 TCAAAATATCATAAGTATTACGGTGGG 57.503 33.333 0.00 0.00 30.46 4.61
79 80 9.547753 GTGGCTTCTCTCAAAATATCATAAGTA 57.452 33.333 0.00 0.00 0.00 2.24
80 81 8.270744 AGTGGCTTCTCTCAAAATATCATAAGT 58.729 33.333 0.00 0.00 0.00 2.24
81 82 8.674263 AGTGGCTTCTCTCAAAATATCATAAG 57.326 34.615 0.00 0.00 0.00 1.73
82 83 9.770097 CTAGTGGCTTCTCTCAAAATATCATAA 57.230 33.333 0.00 0.00 0.00 1.90
83 84 8.928448 ACTAGTGGCTTCTCTCAAAATATCATA 58.072 33.333 0.00 0.00 0.00 2.15
84 85 7.714377 CACTAGTGGCTTCTCTCAAAATATCAT 59.286 37.037 15.49 0.00 0.00 2.45
85 86 7.044181 CACTAGTGGCTTCTCTCAAAATATCA 58.956 38.462 15.49 0.00 0.00 2.15
86 87 7.268586 TCACTAGTGGCTTCTCTCAAAATATC 58.731 38.462 22.48 0.00 0.00 1.63
87 88 7.187824 TCACTAGTGGCTTCTCTCAAAATAT 57.812 36.000 22.48 0.00 0.00 1.28
88 89 6.605471 TCACTAGTGGCTTCTCTCAAAATA 57.395 37.500 22.48 0.00 0.00 1.40
89 90 5.489792 TCACTAGTGGCTTCTCTCAAAAT 57.510 39.130 22.48 0.00 0.00 1.82
90 91 4.955811 TCACTAGTGGCTTCTCTCAAAA 57.044 40.909 22.48 0.00 0.00 2.44
91 92 4.955811 TTCACTAGTGGCTTCTCTCAAA 57.044 40.909 22.48 2.78 0.00 2.69
92 93 4.503296 GGTTTCACTAGTGGCTTCTCTCAA 60.503 45.833 22.48 3.51 0.00 3.02
93 94 3.006967 GGTTTCACTAGTGGCTTCTCTCA 59.993 47.826 22.48 0.00 0.00 3.27
94 95 3.259625 AGGTTTCACTAGTGGCTTCTCTC 59.740 47.826 22.48 5.24 0.00 3.20
95 96 3.243724 AGGTTTCACTAGTGGCTTCTCT 58.756 45.455 22.48 10.05 0.00 3.10
96 97 3.686916 AGGTTTCACTAGTGGCTTCTC 57.313 47.619 22.48 8.10 0.00 2.87
97 98 4.080863 CCATAGGTTTCACTAGTGGCTTCT 60.081 45.833 22.48 16.20 0.00 2.85
98 99 4.192317 CCATAGGTTTCACTAGTGGCTTC 58.808 47.826 22.48 10.36 0.00 3.86
99 100 3.622455 GCCATAGGTTTCACTAGTGGCTT 60.622 47.826 22.48 11.79 40.50 4.35
100 101 2.092914 GCCATAGGTTTCACTAGTGGCT 60.093 50.000 22.48 6.62 40.50 4.75
101 102 2.289565 GCCATAGGTTTCACTAGTGGC 58.710 52.381 22.48 10.96 38.82 5.01
102 103 2.421529 GGGCCATAGGTTTCACTAGTGG 60.422 54.545 22.48 4.49 0.00 4.00
103 104 2.421529 GGGGCCATAGGTTTCACTAGTG 60.422 54.545 17.17 17.17 0.00 2.74
104 105 1.844497 GGGGCCATAGGTTTCACTAGT 59.156 52.381 4.39 0.00 0.00 2.57
105 106 1.143073 GGGGGCCATAGGTTTCACTAG 59.857 57.143 4.39 0.00 0.00 2.57
106 107 1.218844 GGGGGCCATAGGTTTCACTA 58.781 55.000 4.39 0.00 0.00 2.74
107 108 1.921869 CGGGGGCCATAGGTTTCACT 61.922 60.000 4.39 0.00 0.00 3.41
108 109 1.453197 CGGGGGCCATAGGTTTCAC 60.453 63.158 4.39 0.00 0.00 3.18
109 110 2.685534 CCGGGGGCCATAGGTTTCA 61.686 63.158 4.39 0.00 0.00 2.69
110 111 2.194868 CCGGGGGCCATAGGTTTC 59.805 66.667 4.39 0.00 0.00 2.78
111 112 3.425925 CCCGGGGGCCATAGGTTT 61.426 66.667 14.71 0.00 0.00 3.27
112 113 4.771745 ACCCGGGGGCCATAGGTT 62.772 66.667 27.92 0.00 39.32 3.50
114 115 2.765705 ATAGACCCGGGGGCCATAGG 62.766 65.000 27.92 4.40 39.32 2.57
115 116 0.840722 AATAGACCCGGGGGCCATAG 60.841 60.000 27.92 0.00 39.32 2.23
116 117 0.402272 AAATAGACCCGGGGGCCATA 60.402 55.000 27.92 10.11 39.32 2.74
117 118 1.293683 AAAATAGACCCGGGGGCCAT 61.294 55.000 27.92 4.01 39.32 4.40
118 119 1.928714 GAAAATAGACCCGGGGGCCA 61.929 60.000 27.92 0.54 39.32 5.36
119 120 1.152819 GAAAATAGACCCGGGGGCC 60.153 63.158 27.92 13.76 39.32 5.80
120 121 1.152819 GGAAAATAGACCCGGGGGC 60.153 63.158 27.92 16.20 39.32 5.80
121 122 0.850784 ATGGAAAATAGACCCGGGGG 59.149 55.000 27.92 5.70 42.03 5.40
122 123 1.493022 TGATGGAAAATAGACCCGGGG 59.507 52.381 27.92 12.73 0.00 5.73
123 124 3.508845 ATGATGGAAAATAGACCCGGG 57.491 47.619 22.25 22.25 0.00 5.73
124 125 4.968259 TGTATGATGGAAAATAGACCCGG 58.032 43.478 0.00 0.00 0.00 5.73
125 126 6.055588 ACTTGTATGATGGAAAATAGACCCG 58.944 40.000 0.00 0.00 0.00 5.28
126 127 7.881775 AACTTGTATGATGGAAAATAGACCC 57.118 36.000 0.00 0.00 0.00 4.46
127 128 8.406297 GGAAACTTGTATGATGGAAAATAGACC 58.594 37.037 0.00 0.00 0.00 3.85
128 129 8.956426 TGGAAACTTGTATGATGGAAAATAGAC 58.044 33.333 0.00 0.00 0.00 2.59
129 130 9.527157 TTGGAAACTTGTATGATGGAAAATAGA 57.473 29.630 0.00 0.00 0.00 1.98
227 228 9.453572 GTAAGAGTGAGATCTGATAGAGATGAT 57.546 37.037 0.00 0.00 41.91 2.45
228 229 8.435982 TGTAAGAGTGAGATCTGATAGAGATGA 58.564 37.037 0.00 0.00 41.91 2.92
229 230 8.620116 TGTAAGAGTGAGATCTGATAGAGATG 57.380 38.462 0.00 0.00 41.91 2.90
230 231 9.288576 CTTGTAAGAGTGAGATCTGATAGAGAT 57.711 37.037 0.00 0.00 44.78 2.75
231 232 8.271458 ACTTGTAAGAGTGAGATCTGATAGAGA 58.729 37.037 0.00 0.00 34.25 3.10
232 233 8.450578 ACTTGTAAGAGTGAGATCTGATAGAG 57.549 38.462 0.00 0.00 0.00 2.43
245 246 1.148310 CACGGCCACTTGTAAGAGTG 58.852 55.000 2.24 0.00 45.19 3.51
246 247 1.045407 TCACGGCCACTTGTAAGAGT 58.955 50.000 2.24 0.00 0.00 3.24
247 248 2.069273 CTTCACGGCCACTTGTAAGAG 58.931 52.381 2.24 0.00 0.00 2.85
248 249 1.270625 CCTTCACGGCCACTTGTAAGA 60.271 52.381 2.24 0.00 0.00 2.10
249 250 1.156736 CCTTCACGGCCACTTGTAAG 58.843 55.000 2.24 2.98 0.00 2.34
250 251 0.250553 CCCTTCACGGCCACTTGTAA 60.251 55.000 2.24 0.00 0.00 2.41
251 252 1.122632 TCCCTTCACGGCCACTTGTA 61.123 55.000 2.24 0.00 0.00 2.41
252 253 1.779061 ATCCCTTCACGGCCACTTGT 61.779 55.000 2.24 0.00 0.00 3.16
253 254 0.609131 AATCCCTTCACGGCCACTTG 60.609 55.000 2.24 0.00 0.00 3.16
254 255 0.609131 CAATCCCTTCACGGCCACTT 60.609 55.000 2.24 0.00 0.00 3.16
255 256 1.002134 CAATCCCTTCACGGCCACT 60.002 57.895 2.24 0.00 0.00 4.00
256 257 1.002624 TCAATCCCTTCACGGCCAC 60.003 57.895 2.24 0.00 0.00 5.01
257 258 1.002624 GTCAATCCCTTCACGGCCA 60.003 57.895 2.24 0.00 0.00 5.36
258 259 0.608035 TTGTCAATCCCTTCACGGCC 60.608 55.000 0.00 0.00 0.00 6.13
259 260 0.521735 GTTGTCAATCCCTTCACGGC 59.478 55.000 0.00 0.00 0.00 5.68
260 261 0.796312 CGTTGTCAATCCCTTCACGG 59.204 55.000 0.00 0.00 0.00 4.94
261 262 0.165944 GCGTTGTCAATCCCTTCACG 59.834 55.000 0.00 0.00 0.00 4.35
262 263 0.521735 GGCGTTGTCAATCCCTTCAC 59.478 55.000 0.00 0.00 0.00 3.18
263 264 0.400213 AGGCGTTGTCAATCCCTTCA 59.600 50.000 2.13 0.00 0.00 3.02
264 265 1.534729 AAGGCGTTGTCAATCCCTTC 58.465 50.000 11.78 0.00 30.38 3.46
265 266 1.995376 AAAGGCGTTGTCAATCCCTT 58.005 45.000 11.78 11.78 37.50 3.95
266 267 2.871096 TAAAGGCGTTGTCAATCCCT 57.129 45.000 0.00 2.13 0.00 4.20
267 268 2.031683 CGATAAAGGCGTTGTCAATCCC 59.968 50.000 10.13 1.00 0.00 3.85
268 269 2.538939 GCGATAAAGGCGTTGTCAATCC 60.539 50.000 10.13 0.00 0.00 3.01
269 270 2.705154 GCGATAAAGGCGTTGTCAATC 58.295 47.619 10.13 0.00 0.00 2.67
270 271 2.825086 GCGATAAAGGCGTTGTCAAT 57.175 45.000 10.13 0.00 0.00 2.57
279 280 0.796870 GCAACCAACGCGATAAAGGC 60.797 55.000 15.93 5.89 0.00 4.35
280 281 3.306206 GCAACCAACGCGATAAAGG 57.694 52.632 15.93 9.35 0.00 3.11
288 289 1.782028 AAGAACCTCGCAACCAACGC 61.782 55.000 0.00 0.00 0.00 4.84
289 290 1.504359 TAAGAACCTCGCAACCAACG 58.496 50.000 0.00 0.00 0.00 4.10
290 291 4.226761 CAAATAAGAACCTCGCAACCAAC 58.773 43.478 0.00 0.00 0.00 3.77
291 292 3.886505 ACAAATAAGAACCTCGCAACCAA 59.113 39.130 0.00 0.00 0.00 3.67
292 293 3.482436 ACAAATAAGAACCTCGCAACCA 58.518 40.909 0.00 0.00 0.00 3.67
293 294 4.499037 AACAAATAAGAACCTCGCAACC 57.501 40.909 0.00 0.00 0.00 3.77
294 295 5.173131 CACAAACAAATAAGAACCTCGCAAC 59.827 40.000 0.00 0.00 0.00 4.17
295 296 5.163602 ACACAAACAAATAAGAACCTCGCAA 60.164 36.000 0.00 0.00 0.00 4.85
296 297 4.336993 ACACAAACAAATAAGAACCTCGCA 59.663 37.500 0.00 0.00 0.00 5.10
297 298 4.855531 ACACAAACAAATAAGAACCTCGC 58.144 39.130 0.00 0.00 0.00 5.03
298 299 6.204108 ACCTACACAAACAAATAAGAACCTCG 59.796 38.462 0.00 0.00 0.00 4.63
299 300 7.506328 ACCTACACAAACAAATAAGAACCTC 57.494 36.000 0.00 0.00 0.00 3.85
300 301 7.172019 CGTACCTACACAAACAAATAAGAACCT 59.828 37.037 0.00 0.00 0.00 3.50
301 302 7.171337 TCGTACCTACACAAACAAATAAGAACC 59.829 37.037 0.00 0.00 0.00 3.62
302 303 8.075593 TCGTACCTACACAAACAAATAAGAAC 57.924 34.615 0.00 0.00 0.00 3.01
303 304 7.385752 CCTCGTACCTACACAAACAAATAAGAA 59.614 37.037 0.00 0.00 0.00 2.52
304 305 6.869913 CCTCGTACCTACACAAACAAATAAGA 59.130 38.462 0.00 0.00 0.00 2.10
305 306 6.647895 ACCTCGTACCTACACAAACAAATAAG 59.352 38.462 0.00 0.00 0.00 1.73
306 307 6.424509 CACCTCGTACCTACACAAACAAATAA 59.575 38.462 0.00 0.00 0.00 1.40
307 308 5.927689 CACCTCGTACCTACACAAACAAATA 59.072 40.000 0.00 0.00 0.00 1.40
308 309 4.753107 CACCTCGTACCTACACAAACAAAT 59.247 41.667 0.00 0.00 0.00 2.32
309 310 4.121317 CACCTCGTACCTACACAAACAAA 58.879 43.478 0.00 0.00 0.00 2.83
310 311 3.384146 TCACCTCGTACCTACACAAACAA 59.616 43.478 0.00 0.00 0.00 2.83
311 312 2.957680 TCACCTCGTACCTACACAAACA 59.042 45.455 0.00 0.00 0.00 2.83
312 313 3.005155 AGTCACCTCGTACCTACACAAAC 59.995 47.826 0.00 0.00 0.00 2.93
313 314 3.225104 AGTCACCTCGTACCTACACAAA 58.775 45.455 0.00 0.00 0.00 2.83
314 315 2.816087 GAGTCACCTCGTACCTACACAA 59.184 50.000 0.00 0.00 0.00 3.33
315 316 2.430465 GAGTCACCTCGTACCTACACA 58.570 52.381 0.00 0.00 0.00 3.72
329 330 4.702081 AGACCACGCGCGAGTCAC 62.702 66.667 38.31 24.59 32.82 3.67
330 331 4.400109 GAGACCACGCGCGAGTCA 62.400 66.667 38.31 0.00 32.82 3.41
333 334 3.506096 TAGGAGACCACGCGCGAG 61.506 66.667 39.36 29.72 0.00 5.03
334 335 2.857575 TAGTAGGAGACCACGCGCGA 62.858 60.000 39.36 7.53 0.00 5.87
335 336 2.376231 CTAGTAGGAGACCACGCGCG 62.376 65.000 30.96 30.96 0.00 6.86
336 337 1.094073 TCTAGTAGGAGACCACGCGC 61.094 60.000 5.73 0.00 0.00 6.86
337 338 1.595466 ATCTAGTAGGAGACCACGCG 58.405 55.000 3.53 3.53 0.00 6.01
338 339 2.950309 TCAATCTAGTAGGAGACCACGC 59.050 50.000 0.00 0.00 0.00 5.34
339 340 5.181622 GGTATCAATCTAGTAGGAGACCACG 59.818 48.000 11.62 0.00 40.45 4.94
340 341 6.308566 AGGTATCAATCTAGTAGGAGACCAC 58.691 44.000 16.35 6.83 42.56 4.16
341 342 6.532119 AGGTATCAATCTAGTAGGAGACCA 57.468 41.667 16.35 0.00 42.56 4.02
342 343 6.149807 CGAAGGTATCAATCTAGTAGGAGACC 59.850 46.154 9.49 9.49 40.91 3.85
343 344 6.711645 ACGAAGGTATCAATCTAGTAGGAGAC 59.288 42.308 0.00 0.00 0.00 3.36
344 345 6.839454 ACGAAGGTATCAATCTAGTAGGAGA 58.161 40.000 0.00 0.00 0.00 3.71
345 346 7.446013 AGAACGAAGGTATCAATCTAGTAGGAG 59.554 40.741 0.00 0.00 0.00 3.69
346 347 7.288560 AGAACGAAGGTATCAATCTAGTAGGA 58.711 38.462 0.00 0.00 0.00 2.94
347 348 7.228906 TGAGAACGAAGGTATCAATCTAGTAGG 59.771 40.741 0.00 0.00 0.00 3.18
348 349 8.155821 TGAGAACGAAGGTATCAATCTAGTAG 57.844 38.462 0.00 0.00 0.00 2.57
349 350 8.515695 TTGAGAACGAAGGTATCAATCTAGTA 57.484 34.615 0.00 0.00 31.03 1.82
350 351 7.406031 TTGAGAACGAAGGTATCAATCTAGT 57.594 36.000 0.00 0.00 31.03 2.57
351 352 8.703604 TTTTGAGAACGAAGGTATCAATCTAG 57.296 34.615 0.00 0.00 34.12 2.43
352 353 8.932791 GTTTTTGAGAACGAAGGTATCAATCTA 58.067 33.333 0.00 0.00 34.12 1.98
353 354 7.661847 AGTTTTTGAGAACGAAGGTATCAATCT 59.338 33.333 0.00 0.00 34.12 2.40
354 355 7.746475 CAGTTTTTGAGAACGAAGGTATCAATC 59.254 37.037 0.00 0.00 34.12 2.67
355 356 7.444183 TCAGTTTTTGAGAACGAAGGTATCAAT 59.556 33.333 0.00 0.00 34.12 2.57
356 357 6.764085 TCAGTTTTTGAGAACGAAGGTATCAA 59.236 34.615 0.00 0.00 34.74 2.57
357 358 6.285224 TCAGTTTTTGAGAACGAAGGTATCA 58.715 36.000 0.00 0.00 34.74 2.15
358 359 6.780706 TCAGTTTTTGAGAACGAAGGTATC 57.219 37.500 0.00 0.00 34.74 2.24
908 909 3.905678 CTCCGACTGCTAGGGGCG 61.906 72.222 0.00 0.00 45.43 6.13
910 911 3.905678 CGCTCCGACTGCTAGGGG 61.906 72.222 0.00 0.00 0.00 4.79
911 912 3.905678 CCGCTCCGACTGCTAGGG 61.906 72.222 0.00 0.00 0.00 3.53
912 913 3.905678 CCCGCTCCGACTGCTAGG 61.906 72.222 0.00 0.00 0.00 3.02
913 914 2.829003 TCCCGCTCCGACTGCTAG 60.829 66.667 0.00 0.00 0.00 3.42
914 915 2.829003 CTCCCGCTCCGACTGCTA 60.829 66.667 0.00 0.00 0.00 3.49
915 916 4.742649 TCTCCCGCTCCGACTGCT 62.743 66.667 0.00 0.00 0.00 4.24
916 917 4.500116 GTCTCCCGCTCCGACTGC 62.500 72.222 0.00 0.00 0.00 4.40
917 918 2.752238 AGTCTCCCGCTCCGACTG 60.752 66.667 0.00 0.00 36.70 3.51
918 919 2.752238 CAGTCTCCCGCTCCGACT 60.752 66.667 0.00 0.00 38.47 4.18
919 920 3.827898 CCAGTCTCCCGCTCCGAC 61.828 72.222 0.00 0.00 0.00 4.79
920 921 4.361971 ACCAGTCTCCCGCTCCGA 62.362 66.667 0.00 0.00 0.00 4.55
921 922 3.827898 GACCAGTCTCCCGCTCCG 61.828 72.222 0.00 0.00 0.00 4.63
922 923 3.827898 CGACCAGTCTCCCGCTCC 61.828 72.222 0.00 0.00 0.00 4.70
923 924 3.063084 ACGACCAGTCTCCCGCTC 61.063 66.667 0.00 0.00 0.00 5.03
924 925 3.374402 CACGACCAGTCTCCCGCT 61.374 66.667 0.00 0.00 0.00 5.52
926 927 4.778415 CGCACGACCAGTCTCCCG 62.778 72.222 0.00 0.00 0.00 5.14
927 928 4.436998 CCGCACGACCAGTCTCCC 62.437 72.222 0.00 0.00 0.00 4.30
928 929 3.371063 TCCGCACGACCAGTCTCC 61.371 66.667 0.00 0.00 0.00 3.71
929 930 2.126424 GTCCGCACGACCAGTCTC 60.126 66.667 0.00 0.00 35.23 3.36
930 931 2.597805 AGTCCGCACGACCAGTCT 60.598 61.111 0.00 0.00 43.08 3.24
931 932 2.430921 CAGTCCGCACGACCAGTC 60.431 66.667 0.00 0.00 43.08 3.51
932 933 3.208884 GACAGTCCGCACGACCAGT 62.209 63.158 0.00 0.00 43.08 4.00
933 934 2.430921 GACAGTCCGCACGACCAG 60.431 66.667 0.00 0.00 43.08 4.00
934 935 3.986006 GGACAGTCCGCACGACCA 61.986 66.667 3.05 0.00 43.08 4.02
935 936 3.628280 GAGGACAGTCCGCACGACC 62.628 68.421 17.95 0.00 42.75 4.79
936 937 2.126424 GAGGACAGTCCGCACGAC 60.126 66.667 17.95 2.05 42.75 4.34
937 938 3.733960 CGAGGACAGTCCGCACGA 61.734 66.667 21.91 0.00 42.75 4.35
938 939 3.263503 TTCGAGGACAGTCCGCACG 62.264 63.158 21.91 21.99 42.75 5.34
939 940 1.444553 CTTCGAGGACAGTCCGCAC 60.445 63.158 21.91 12.82 42.75 5.34
940 941 1.461091 AACTTCGAGGACAGTCCGCA 61.461 55.000 21.91 7.61 42.75 5.69
941 942 1.009389 CAACTTCGAGGACAGTCCGC 61.009 60.000 14.32 13.75 42.75 5.54
942 943 0.314302 ACAACTTCGAGGACAGTCCG 59.686 55.000 14.32 3.36 42.75 4.79
943 944 1.340248 TGACAACTTCGAGGACAGTCC 59.660 52.381 12.25 12.25 36.58 3.85
944 945 2.795175 TGACAACTTCGAGGACAGTC 57.205 50.000 0.00 6.68 0.00 3.51
945 946 3.536956 TTTGACAACTTCGAGGACAGT 57.463 42.857 0.00 0.00 0.00 3.55
946 947 5.470368 TCTATTTGACAACTTCGAGGACAG 58.530 41.667 0.00 0.00 0.00 3.51
947 948 5.462530 TCTATTTGACAACTTCGAGGACA 57.537 39.130 0.00 0.00 0.00 4.02
948 949 4.865365 CCTCTATTTGACAACTTCGAGGAC 59.135 45.833 0.00 0.00 39.23 3.85
949 950 4.770531 TCCTCTATTTGACAACTTCGAGGA 59.229 41.667 15.96 15.96 42.38 3.71
950 951 5.073311 TCCTCTATTTGACAACTTCGAGG 57.927 43.478 13.16 13.16 38.46 4.63
951 952 6.813649 TCAATCCTCTATTTGACAACTTCGAG 59.186 38.462 0.00 0.00 0.00 4.04
952 953 6.697395 TCAATCCTCTATTTGACAACTTCGA 58.303 36.000 0.00 0.00 0.00 3.71
953 954 6.813649 TCTCAATCCTCTATTTGACAACTTCG 59.186 38.462 0.00 0.00 0.00 3.79
954 955 8.553459 TTCTCAATCCTCTATTTGACAACTTC 57.447 34.615 0.00 0.00 0.00 3.01
967 968 9.558396 GATGAGTTGATTTATTCTCAATCCTCT 57.442 33.333 0.00 0.00 39.75 3.69
968 969 8.782144 GGATGAGTTGATTTATTCTCAATCCTC 58.218 37.037 0.00 0.00 39.75 3.71
969 970 7.723172 GGGATGAGTTGATTTATTCTCAATCCT 59.277 37.037 1.90 0.00 39.75 3.24
970 971 7.503566 TGGGATGAGTTGATTTATTCTCAATCC 59.496 37.037 0.00 0.00 39.75 3.01
971 972 8.455903 TGGGATGAGTTGATTTATTCTCAATC 57.544 34.615 0.00 0.00 39.75 2.67
972 973 8.827832 TTGGGATGAGTTGATTTATTCTCAAT 57.172 30.769 0.00 0.00 39.75 2.57
973 974 8.648698 TTTGGGATGAGTTGATTTATTCTCAA 57.351 30.769 0.00 0.00 39.75 3.02
974 975 8.827832 ATTTGGGATGAGTTGATTTATTCTCA 57.172 30.769 0.00 0.00 40.43 3.27
980 981 8.620416 CGAACATATTTGGGATGAGTTGATTTA 58.380 33.333 0.00 0.00 0.00 1.40
981 982 7.339212 TCGAACATATTTGGGATGAGTTGATTT 59.661 33.333 0.00 0.00 0.00 2.17
982 983 6.828273 TCGAACATATTTGGGATGAGTTGATT 59.172 34.615 0.00 0.00 0.00 2.57
983 984 6.356556 TCGAACATATTTGGGATGAGTTGAT 58.643 36.000 0.00 0.00 0.00 2.57
984 985 5.739959 TCGAACATATTTGGGATGAGTTGA 58.260 37.500 0.00 0.00 0.00 3.18
985 986 6.435430 TTCGAACATATTTGGGATGAGTTG 57.565 37.500 0.00 0.00 0.00 3.16
986 987 5.066505 GCTTCGAACATATTTGGGATGAGTT 59.933 40.000 0.00 0.00 0.00 3.01
987 988 4.576463 GCTTCGAACATATTTGGGATGAGT 59.424 41.667 0.00 0.00 0.00 3.41
988 989 4.023707 GGCTTCGAACATATTTGGGATGAG 60.024 45.833 0.00 0.00 0.00 2.90
989 990 3.882888 GGCTTCGAACATATTTGGGATGA 59.117 43.478 0.00 0.00 0.00 2.92
990 991 3.631686 TGGCTTCGAACATATTTGGGATG 59.368 43.478 0.00 0.00 0.00 3.51
991 992 3.885297 CTGGCTTCGAACATATTTGGGAT 59.115 43.478 0.00 0.00 0.00 3.85
992 993 3.278574 CTGGCTTCGAACATATTTGGGA 58.721 45.455 0.00 0.00 0.00 4.37
993 994 2.358898 CCTGGCTTCGAACATATTTGGG 59.641 50.000 0.00 0.00 0.00 4.12
994 995 3.278574 TCCTGGCTTCGAACATATTTGG 58.721 45.455 0.00 0.00 0.00 3.28
995 996 4.963276 TTCCTGGCTTCGAACATATTTG 57.037 40.909 0.00 0.00 0.00 2.32
996 997 5.192927 TCATTCCTGGCTTCGAACATATTT 58.807 37.500 0.00 0.00 0.00 1.40
997 998 4.780815 TCATTCCTGGCTTCGAACATATT 58.219 39.130 0.00 0.00 0.00 1.28
998 999 4.101585 TCTCATTCCTGGCTTCGAACATAT 59.898 41.667 0.00 0.00 0.00 1.78
999 1000 3.450817 TCTCATTCCTGGCTTCGAACATA 59.549 43.478 0.00 0.00 0.00 2.29
1000 1001 2.237143 TCTCATTCCTGGCTTCGAACAT 59.763 45.455 0.00 0.00 0.00 2.71
1001 1002 1.623311 TCTCATTCCTGGCTTCGAACA 59.377 47.619 0.00 0.00 0.00 3.18
1012 1013 4.313020 AATCACTGGCTTTCTCATTCCT 57.687 40.909 0.00 0.00 0.00 3.36
1013 1014 5.166398 CAAAATCACTGGCTTTCTCATTCC 58.834 41.667 0.00 0.00 0.00 3.01
1050 1051 3.370315 CCTCAAGCTTAACAGGCAGAGAT 60.370 47.826 0.00 0.00 36.74 2.75
1085 1086 0.906775 AATGGGGTGTACCAGTACCG 59.093 55.000 5.53 0.00 45.20 4.02
1108 1109 2.421619 CTCTTCAGCCTTCAACACCTC 58.578 52.381 0.00 0.00 0.00 3.85
1112 1113 1.888215 CTGCTCTTCAGCCTTCAACA 58.112 50.000 0.00 0.00 46.26 3.33
1178 1179 7.042456 CGAGGTCAATAGGTACAGATGAATTTG 60.042 40.741 0.00 0.00 0.00 2.32
1216 1217 5.768662 CCTCTGTAATGAAGGATGCATCATT 59.231 40.000 25.41 25.41 45.54 2.57
1258 1259 1.135141 CCGAGCCTCATATAGCTGCTC 60.135 57.143 4.91 9.33 43.79 4.26
1350 1351 3.427233 GCAGCTCATCCAACTTGCTAAAG 60.427 47.826 0.00 0.00 39.49 1.85
1418 1419 5.050091 GGACCTCATACATCTGTTATTTGCG 60.050 44.000 0.00 0.00 0.00 4.85
1439 1440 2.032681 GGTCAGCACAGTGGGGAC 59.967 66.667 1.84 0.00 0.00 4.46
1440 1441 1.352622 AAAGGTCAGCACAGTGGGGA 61.353 55.000 1.84 0.00 0.00 4.81
1494 1501 3.025978 CAACAGGTAATGGCACCATCAT 58.974 45.455 1.88 0.00 41.40 2.45
1496 1503 1.750778 CCAACAGGTAATGGCACCATC 59.249 52.381 1.88 0.00 41.40 3.51
1497 1504 1.077005 ACCAACAGGTAATGGCACCAT 59.923 47.619 0.00 0.00 41.40 3.55
1498 1505 0.480690 ACCAACAGGTAATGGCACCA 59.519 50.000 0.00 0.00 41.40 4.17
1499 1506 1.627864 AACCAACAGGTAATGGCACC 58.372 50.000 0.00 0.00 40.51 5.01
1501 1508 2.823154 GCTTAACCAACAGGTAATGGCA 59.177 45.455 0.00 0.00 40.51 4.92
1502 1509 2.823154 TGCTTAACCAACAGGTAATGGC 59.177 45.455 0.00 0.00 40.51 4.40
1503 1510 4.331968 TCTGCTTAACCAACAGGTAATGG 58.668 43.478 0.00 0.00 42.60 3.16
1504 1511 5.957842 TTCTGCTTAACCAACAGGTAATG 57.042 39.130 0.00 0.00 33.53 1.90
1505 1512 7.539034 AAATTCTGCTTAACCAACAGGTAAT 57.461 32.000 0.00 0.00 33.53 1.89
1531 1542 6.241645 ACCCCTCTTCATCTTTAACTTCAAG 58.758 40.000 0.00 0.00 0.00 3.02
1666 1677 5.009610 ACAGCCAAAGATTACAAACGAACAT 59.990 36.000 0.00 0.00 0.00 2.71
1667 1678 4.336993 ACAGCCAAAGATTACAAACGAACA 59.663 37.500 0.00 0.00 0.00 3.18
1675 1686 6.109156 TGTAGAAGACAGCCAAAGATTACA 57.891 37.500 0.00 0.00 32.86 2.41
1697 1708 4.285292 GCGAACAAAGCATCTCCATAATG 58.715 43.478 0.00 0.00 34.19 1.90
1710 1721 3.425193 GCAAAAGTACATGGCGAACAAAG 59.575 43.478 0.00 0.00 0.00 2.77
1717 1736 4.031652 GCAAATAAGCAAAAGTACATGGCG 59.968 41.667 0.00 0.00 0.00 5.69
1759 1778 6.051179 ACCCTAAGTCCATTGAGAAAGTAC 57.949 41.667 0.00 0.00 0.00 2.73
1799 1818 6.317391 GGCATGCTCTATAGTTTTCTTCAAGT 59.683 38.462 18.92 0.00 0.00 3.16
1813 1832 1.798626 TCAGGACAGGCATGCTCTAT 58.201 50.000 18.92 1.69 0.00 1.98
1820 1839 1.123077 TAAGCGATCAGGACAGGCAT 58.877 50.000 0.00 0.00 0.00 4.40
1823 1842 3.185246 ACATTAAGCGATCAGGACAGG 57.815 47.619 0.00 0.00 0.00 4.00
1834 1853 7.062956 GGAATTTTGGGAAGTTAACATTAAGCG 59.937 37.037 8.61 0.00 0.00 4.68
1866 1885 3.777522 AGGATGCTGCTACTAGAAAAGGT 59.222 43.478 0.00 0.00 0.00 3.50
1929 1948 9.369904 CTGTATTACAGCAAATTTAAAATGGCT 57.630 29.630 10.75 0.00 39.62 4.75
1980 1999 4.799564 TGGAATGTTGGAATGCCTTAAC 57.200 40.909 0.00 0.00 34.31 2.01
2001 2020 9.044150 CAAACAATTCAAAGTAACATTGGTCAT 57.956 29.630 0.00 0.00 31.94 3.06
2008 2027 8.257306 ACAAGTCCAAACAATTCAAAGTAACAT 58.743 29.630 0.00 0.00 0.00 2.71
2280 2299 1.717937 GCGCGATCTTGTGAGCATT 59.282 52.632 12.10 0.00 0.00 3.56
2422 2441 2.104792 TCTGCCACAGTGATATTAGCCC 59.895 50.000 0.62 0.00 32.61 5.19
2544 2563 7.283127 GTGGAAAGAGGAGCAATTATCATGTAA 59.717 37.037 0.00 0.00 0.00 2.41
2688 2714 5.010012 CACTTTATCCCCATGGTAAATCAGC 59.990 44.000 11.73 0.00 0.00 4.26
2703 2729 0.178068 TCTGCCGAGCCACTTTATCC 59.822 55.000 0.00 0.00 0.00 2.59
2812 2839 8.993121 CATATTTCCACTTATAACGAGCAAGAT 58.007 33.333 0.00 0.00 0.00 2.40
2887 2914 8.206325 CCATATATGGCTTCATCATGTAGAAC 57.794 38.462 18.77 0.00 41.75 3.01
2925 2952 6.934645 CGGAGGCATGTTAATAAGGAATAGAA 59.065 38.462 0.00 0.00 0.00 2.10
2950 2977 2.271800 CGATGTCCCTGCAAGAAGTAC 58.728 52.381 0.00 0.00 34.07 2.73
2956 2989 0.321564 TCAACCGATGTCCCTGCAAG 60.322 55.000 0.00 0.00 0.00 4.01
3153 3186 1.398390 GCCAGTAGTGCATGTGTAAGC 59.602 52.381 0.00 0.00 0.00 3.09
3200 3242 4.291249 AGAAATTACCCAAGGTTCCTGCTA 59.709 41.667 0.00 0.00 37.09 3.49
3203 3245 4.407365 ACAGAAATTACCCAAGGTTCCTG 58.593 43.478 0.00 0.00 37.09 3.86
3204 3246 4.741928 ACAGAAATTACCCAAGGTTCCT 57.258 40.909 0.00 0.00 37.09 3.36
3206 3248 8.747538 ACATATACAGAAATTACCCAAGGTTC 57.252 34.615 0.00 0.00 37.09 3.62
3231 3274 5.357878 GGATATGGAGACTGCAACAAAATGA 59.642 40.000 0.00 0.00 0.00 2.57
3332 3423 7.888021 ACATTGGAATGTTCAGGTCACTTATAA 59.112 33.333 0.00 0.00 46.95 0.98
3360 3452 5.113502 ACATTTTCAAAGCTAGACACTGC 57.886 39.130 0.00 0.00 0.00 4.40
3425 3518 6.827762 TGTGCTATTGGATTCATACACATTCA 59.172 34.615 0.00 0.00 32.27 2.57
3426 3519 7.263100 TGTGCTATTGGATTCATACACATTC 57.737 36.000 0.00 0.00 32.27 2.67
3427 3520 7.828508 ATGTGCTATTGGATTCATACACATT 57.171 32.000 0.00 0.00 43.01 2.71
3592 3704 5.334879 GGAACTGATGTTGCGACTGTTTAAT 60.335 40.000 5.50 0.00 36.39 1.40
3593 3705 4.024387 GGAACTGATGTTGCGACTGTTTAA 60.024 41.667 5.50 0.00 36.39 1.52
3596 3708 1.873591 GGAACTGATGTTGCGACTGTT 59.126 47.619 5.50 5.50 36.39 3.16
3638 3750 6.985188 TTGAATAGTGGAGTTGCTACAATC 57.015 37.500 0.13 0.00 0.00 2.67
3649 3761 6.108687 TCTACAGTTGCATTGAATAGTGGAG 58.891 40.000 5.80 0.63 0.00 3.86
3683 3833 4.211920 CCCTGTCAGGTTACTTGGAAAAA 58.788 43.478 17.85 0.00 31.93 1.94
3688 3838 0.322546 GCCCCTGTCAGGTTACTTGG 60.323 60.000 17.85 11.17 31.93 3.61
3689 3839 0.673644 CGCCCCTGTCAGGTTACTTG 60.674 60.000 17.85 0.97 31.93 3.16
3691 3841 0.834687 TTCGCCCCTGTCAGGTTACT 60.835 55.000 17.85 0.00 31.93 2.24
3692 3842 0.391263 CTTCGCCCCTGTCAGGTTAC 60.391 60.000 17.85 5.64 31.93 2.50
3693 3843 1.550130 CCTTCGCCCCTGTCAGGTTA 61.550 60.000 17.85 0.00 31.93 2.85
3694 3844 2.750350 CTTCGCCCCTGTCAGGTT 59.250 61.111 17.85 0.00 31.93 3.50
3695 3845 3.322466 CCTTCGCCCCTGTCAGGT 61.322 66.667 17.85 0.00 31.93 4.00
3696 3846 4.101448 CCCTTCGCCCCTGTCAGG 62.101 72.222 12.40 12.40 34.30 3.86
3697 3847 4.101448 CCCCTTCGCCCCTGTCAG 62.101 72.222 0.00 0.00 0.00 3.51
3698 3848 4.649705 TCCCCTTCGCCCCTGTCA 62.650 66.667 0.00 0.00 0.00 3.58
3699 3849 3.787001 CTCCCCTTCGCCCCTGTC 61.787 72.222 0.00 0.00 0.00 3.51
3714 3864 3.958147 TACTGCTGCGCCAAGGCTC 62.958 63.158 4.18 1.20 39.32 4.70
3715 3865 3.551496 TTACTGCTGCGCCAAGGCT 62.551 57.895 4.18 0.00 39.32 4.58
3716 3866 2.533391 CTTTACTGCTGCGCCAAGGC 62.533 60.000 4.18 0.00 37.85 4.35
3717 3867 1.503542 CTTTACTGCTGCGCCAAGG 59.496 57.895 4.18 0.00 0.00 3.61
3718 3868 1.154150 GCTTTACTGCTGCGCCAAG 60.154 57.895 4.18 1.65 0.00 3.61
3719 3869 1.600636 AGCTTTACTGCTGCGCCAA 60.601 52.632 4.18 0.00 42.33 4.52
3720 3870 2.032528 AGCTTTACTGCTGCGCCA 59.967 55.556 4.18 0.00 42.33 5.69
3729 3879 2.618709 GTCACAAGGCAACAGCTTTACT 59.381 45.455 0.00 0.00 41.41 2.24
3730 3880 2.287608 GGTCACAAGGCAACAGCTTTAC 60.288 50.000 0.00 0.00 41.41 2.01
3731 3881 1.953686 GGTCACAAGGCAACAGCTTTA 59.046 47.619 0.00 0.00 41.41 1.85
3732 3882 0.746659 GGTCACAAGGCAACAGCTTT 59.253 50.000 0.00 0.00 41.41 3.51
3733 3883 0.395586 TGGTCACAAGGCAACAGCTT 60.396 50.000 0.00 0.00 41.41 3.74
3734 3884 0.178981 ATGGTCACAAGGCAACAGCT 60.179 50.000 0.00 0.00 41.41 4.24
3735 3885 0.675633 AATGGTCACAAGGCAACAGC 59.324 50.000 0.00 0.00 41.41 4.40
3736 3886 2.489329 CCTAATGGTCACAAGGCAACAG 59.511 50.000 0.00 0.00 41.41 3.16
3737 3887 2.158534 ACCTAATGGTCACAAGGCAACA 60.159 45.455 0.00 0.00 44.78 3.33
3738 3888 2.514803 ACCTAATGGTCACAAGGCAAC 58.485 47.619 0.00 0.00 44.78 4.17
3739 3889 2.969821 ACCTAATGGTCACAAGGCAA 57.030 45.000 0.00 0.00 44.78 4.52
3749 3899 2.167094 TCGAACCCGTGACCTAATGGT 61.167 52.381 0.00 0.00 42.51 3.55
3750 3900 0.533491 TCGAACCCGTGACCTAATGG 59.467 55.000 0.00 0.00 37.05 3.16
3751 3901 1.203994 ACTCGAACCCGTGACCTAATG 59.796 52.381 0.00 0.00 37.05 1.90
3752 3902 1.475682 GACTCGAACCCGTGACCTAAT 59.524 52.381 0.00 0.00 37.05 1.73
3753 3903 0.883833 GACTCGAACCCGTGACCTAA 59.116 55.000 0.00 0.00 37.05 2.69
3754 3904 0.962356 GGACTCGAACCCGTGACCTA 60.962 60.000 0.00 0.00 39.62 3.08
3755 3905 2.273912 GGACTCGAACCCGTGACCT 61.274 63.158 0.00 0.00 39.62 3.85
3756 3906 2.260743 GGACTCGAACCCGTGACC 59.739 66.667 0.00 0.00 37.08 4.02
3757 3907 1.080705 CAGGACTCGAACCCGTGAC 60.081 63.158 4.92 0.00 37.05 3.67
3758 3908 2.273179 CCAGGACTCGAACCCGTGA 61.273 63.158 4.92 0.00 37.05 4.35
3759 3909 1.812686 TTCCAGGACTCGAACCCGTG 61.813 60.000 0.00 0.64 37.05 4.94
3760 3910 1.117142 TTTCCAGGACTCGAACCCGT 61.117 55.000 0.00 0.00 37.05 5.28
3761 3911 0.669625 GTTTCCAGGACTCGAACCCG 60.670 60.000 0.00 0.00 37.07 5.28
3762 3912 0.395312 TGTTTCCAGGACTCGAACCC 59.605 55.000 0.00 0.12 0.00 4.11
3763 3913 1.797025 CTGTTTCCAGGACTCGAACC 58.203 55.000 0.00 0.64 34.90 3.62
3764 3914 1.149148 GCTGTTTCCAGGACTCGAAC 58.851 55.000 0.00 0.00 39.22 3.95
3765 3915 0.034896 GGCTGTTTCCAGGACTCGAA 59.965 55.000 0.00 0.00 39.22 3.71
3766 3916 0.832135 AGGCTGTTTCCAGGACTCGA 60.832 55.000 0.00 0.00 39.22 4.04
3767 3917 0.390472 GAGGCTGTTTCCAGGACTCG 60.390 60.000 0.00 0.00 39.22 4.18
3768 3918 0.980423 AGAGGCTGTTTCCAGGACTC 59.020 55.000 0.00 0.00 39.22 3.36
3769 3919 1.072965 CAAGAGGCTGTTTCCAGGACT 59.927 52.381 0.00 0.00 39.22 3.85
3770 3920 1.528129 CAAGAGGCTGTTTCCAGGAC 58.472 55.000 0.00 0.00 39.22 3.85
3771 3921 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.000 0.00 0.00 39.22 3.86
3772 3922 0.538057 TGCAAGAGGCTGTTTCCAGG 60.538 55.000 0.00 0.00 45.15 4.45
3773 3923 0.879765 CTGCAAGAGGCTGTTTCCAG 59.120 55.000 0.00 0.00 45.15 3.86
3774 3924 0.473755 TCTGCAAGAGGCTGTTTCCA 59.526 50.000 0.00 0.00 38.67 3.53
3775 3925 3.329300 TCTGCAAGAGGCTGTTTCC 57.671 52.632 0.00 0.00 38.67 3.13
3785 3935 4.335416 CCTTTCCCTACATTTCTGCAAGA 58.665 43.478 0.00 0.00 44.68 3.02
3786 3936 3.119352 GCCTTTCCCTACATTTCTGCAAG 60.119 47.826 0.00 0.00 0.00 4.01
3787 3937 2.825532 GCCTTTCCCTACATTTCTGCAA 59.174 45.455 0.00 0.00 0.00 4.08
3788 3938 2.041620 AGCCTTTCCCTACATTTCTGCA 59.958 45.455 0.00 0.00 0.00 4.41
3789 3939 2.424956 CAGCCTTTCCCTACATTTCTGC 59.575 50.000 0.00 0.00 0.00 4.26
3790 3940 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
3791 3941 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
3792 3942 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
3793 3943 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
3794 3944 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
3795 3945 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
3796 3946 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
3797 3947 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
3798 3948 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
3799 3949 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
3800 3950 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
3801 3951 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
3802 3952 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
3803 3953 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
3804 3954 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
3805 3955 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
3806 3956 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
3807 3957 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
3808 3958 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
3809 3959 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
3810 3960 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
3811 3961 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
3821 3971 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
3822 3972 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
3823 3973 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
3824 3974 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
3825 3975 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
3826 3976 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
3827 3977 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
3828 3978 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
3835 3985 4.735599 AGGGTCCGGGGAAGGGTC 62.736 72.222 0.00 0.00 0.00 4.46
3877 4027 0.608130 CAGGTTAAAAAGGGCAGCCC 59.392 55.000 24.90 24.90 45.90 5.19
3878 4028 0.608130 CCAGGTTAAAAAGGGCAGCC 59.392 55.000 1.26 1.26 0.00 4.85
3879 4029 0.037326 GCCAGGTTAAAAAGGGCAGC 60.037 55.000 0.00 0.00 44.01 5.25
3882 4032 0.608130 CCTGCCAGGTTAAAAAGGGC 59.392 55.000 1.39 0.00 44.82 5.19
3883 4033 1.266178 CCCTGCCAGGTTAAAAAGGG 58.734 55.000 10.47 0.00 38.56 3.95
3884 4034 1.266178 CCCCTGCCAGGTTAAAAAGG 58.734 55.000 10.47 0.00 31.93 3.11
3885 4035 0.608130 GCCCCTGCCAGGTTAAAAAG 59.392 55.000 10.47 0.00 31.93 2.27
3886 4036 1.182385 CGCCCCTGCCAGGTTAAAAA 61.182 55.000 10.47 0.00 31.93 1.94
3887 4037 1.605165 CGCCCCTGCCAGGTTAAAA 60.605 57.895 10.47 0.00 31.93 1.52
3888 4038 2.034999 CGCCCCTGCCAGGTTAAA 59.965 61.111 10.47 0.00 31.93 1.52
3889 4039 4.733542 GCGCCCCTGCCAGGTTAA 62.734 66.667 10.47 0.00 31.93 2.01
3933 4339 4.021916 ACAGGGTATCGTTGTAACTAGCT 58.978 43.478 0.00 0.00 0.00 3.32
3966 4372 3.257873 TGGGTTGTAATTGTTCTGCCATG 59.742 43.478 0.00 0.00 0.00 3.66
4048 4481 3.727726 CGCATGTGGACATCTACCATAA 58.272 45.455 0.00 0.00 39.69 1.90
4050 4483 1.811558 GCGCATGTGGACATCTACCAT 60.812 52.381 8.62 0.00 39.69 3.55
4063 4496 2.187946 GGCTACTCTGGCGCATGT 59.812 61.111 10.83 4.30 0.00 3.21
4246 5112 8.681486 ACTTATTCATAGCATGCATTTCAGTA 57.319 30.769 21.98 1.26 0.00 2.74
4247 5113 7.578310 ACTTATTCATAGCATGCATTTCAGT 57.422 32.000 21.98 8.07 0.00 3.41
4348 5410 5.745227 ACTCCTTGACACGAATTATGGAAT 58.255 37.500 0.00 0.00 0.00 3.01
4359 5421 7.878477 TGTTTAAATAGTACTCCTTGACACG 57.122 36.000 0.00 0.00 0.00 4.49
4506 5621 6.158598 GGCATGAAGCTTTGAAATAACAAGA 58.841 36.000 0.00 0.00 44.79 3.02
4513 5628 5.766174 ACAAAATGGCATGAAGCTTTGAAAT 59.234 32.000 21.95 3.87 44.79 2.17
4537 5652 4.627284 TCCGTCTTAAAAGGAATGGACA 57.373 40.909 0.00 0.00 32.01 4.02
4564 5679 3.416253 GCATCTGCTCCACATCCAT 57.584 52.632 0.00 0.00 38.21 3.41
4575 5690 2.093216 CTTCCGTGGAAGCATCTGC 58.907 57.895 15.27 0.00 43.95 4.26
4662 5777 6.318648 TCTCAAGCAAGTAGTTGTCAAATGTT 59.681 34.615 11.85 0.00 35.92 2.71
4742 5868 8.556213 TTGTTTACTTATACACAGATTGGACC 57.444 34.615 0.00 0.00 0.00 4.46
4801 5927 1.926511 GCCAGGTCTCCGCAACAATG 61.927 60.000 0.00 0.00 0.00 2.82
4803 5929 2.281484 GCCAGGTCTCCGCAACAA 60.281 61.111 0.00 0.00 0.00 2.83
4937 6070 4.227300 ACCATAGAGGGCAACACAAATAGA 59.773 41.667 0.00 0.00 43.89 1.98
4951 6084 7.396540 AAATTAGCAAACAGAACCATAGAGG 57.603 36.000 0.00 0.00 45.67 3.69
5093 6227 5.221441 GGAGAACCATAAACCTTGTGCTTTT 60.221 40.000 0.00 0.00 35.97 2.27
5506 7063 4.554292 ACATGTATAGCTCAGAATGCTCG 58.446 43.478 0.00 0.00 41.46 5.03
5534 7093 8.918202 ACATTCAGGTGTTCTAAGATTGTAAA 57.082 30.769 0.00 0.00 0.00 2.01
5555 7114 7.096551 GCTGTGGGATGTTAAATTACAACATT 58.903 34.615 15.67 4.60 44.55 2.71
5657 7341 5.964958 ACCAACTCAGATGTATGTTTTGG 57.035 39.130 0.00 0.00 38.27 3.28
5692 7378 1.344114 GGAACCAGCCAAGCAAAATGA 59.656 47.619 0.00 0.00 0.00 2.57
5705 7391 3.817647 CAGGAAGAAAACTCAGGAACCAG 59.182 47.826 0.00 0.00 0.00 4.00
5769 7475 1.880027 TCGGAGCTTTTTCCTTTCAGC 59.120 47.619 0.00 0.00 34.96 4.26
5787 7493 3.688272 CAATTAGCTGCCAATTCAGTCG 58.312 45.455 3.03 0.00 36.49 4.18
5813 7519 1.896220 TGTGCAACTTCATCCAGTCC 58.104 50.000 0.00 0.00 38.04 3.85
5827 7534 1.407299 CGGATTGGAGAAGGATGTGCA 60.407 52.381 0.00 0.00 0.00 4.57
5836 7543 3.348647 TTGCTGAATCGGATTGGAGAA 57.651 42.857 8.18 0.00 0.00 2.87
5842 7549 4.789012 AACACATTTGCTGAATCGGATT 57.211 36.364 2.19 2.19 0.00 3.01
5889 7598 1.810532 GTGAGCCTACTCGGGTGAG 59.189 63.158 0.00 0.00 46.69 3.51
5906 7615 0.745845 GATGCAGGCTCAATGGTCGT 60.746 55.000 0.00 0.00 0.00 4.34
6009 7893 9.541143 GAGTCTTTTTCCCTCTAAATGAGATAG 57.459 37.037 0.00 0.00 45.39 2.08
6102 8040 0.391597 TGTCCCCGACAGTTTGAGAC 59.608 55.000 0.00 0.00 37.67 3.36
6185 8130 5.836024 TGTGGGTTAGAATACTGGTTCTT 57.164 39.130 3.47 0.00 39.15 2.52
6245 8472 8.755977 AGCCATTAAATCATCAAACAGAGAAAT 58.244 29.630 0.00 0.00 0.00 2.17
6246 8473 8.125978 AGCCATTAAATCATCAAACAGAGAAA 57.874 30.769 0.00 0.00 0.00 2.52
6480 8721 5.927030 ACGACTGTTACTTTTGTATGCATG 58.073 37.500 10.16 0.00 34.49 4.06
6560 8825 5.776173 ACAAACAAAACATCCCATACGAA 57.224 34.783 0.00 0.00 0.00 3.85
6629 8895 4.097892 TCAGCGTATCACAGCTATGAAAGA 59.902 41.667 0.00 0.00 42.52 2.52
6733 9002 1.889170 TGCCAACCGATAAACATGCAA 59.111 42.857 0.00 0.00 0.00 4.08
6757 9026 2.027192 TCCATACCTCAACAGAGTTGGC 60.027 50.000 9.72 0.00 0.00 4.52
6783 9194 2.159310 CCTAGCAAGAGTCTGAAGGTCG 60.159 54.545 0.00 0.00 0.00 4.79
6812 9223 4.147449 TGAGGAGCGATGCCACGG 62.147 66.667 0.00 0.00 0.00 4.94
6825 9236 1.207089 TGCGACAATAAGGAGGTGAGG 59.793 52.381 0.00 0.00 0.00 3.86
6836 9247 4.278919 TGATAATACGTCCCTGCGACAATA 59.721 41.667 0.00 0.00 42.07 1.90
6852 9263 7.989826 GCTTTCCAAAAGCTCTCTTGATAATA 58.010 34.615 15.33 0.00 40.01 0.98
6885 9296 0.605319 TCCCAATCACAACGTGCTCC 60.605 55.000 0.00 0.00 32.98 4.70
6921 9332 0.503117 CGTTAGGCTTCGCGCTATTC 59.497 55.000 5.56 0.00 39.13 1.75
6959 9371 1.132453 CACAATCTACACTCGAGGCGA 59.868 52.381 18.41 7.48 0.00 5.54
6962 9374 6.157211 ACTAAAACACAATCTACACTCGAGG 58.843 40.000 18.41 8.36 0.00 4.63
7028 9557 6.035843 CAGTTGCTTTGCTTCTGTTTTTCTA 58.964 36.000 0.00 0.00 0.00 2.10
7038 9662 2.297033 TCATTCCCAGTTGCTTTGCTTC 59.703 45.455 0.00 0.00 0.00 3.86
7080 9704 6.650120 TCCTCCTCCTGTATTTATCAACAAC 58.350 40.000 0.00 0.00 0.00 3.32
7088 9712 2.700897 GCAGCTCCTCCTCCTGTATTTA 59.299 50.000 0.00 0.00 0.00 1.40
7235 9859 0.728843 TTCAGGGGGATAAGAGGGGT 59.271 55.000 0.00 0.00 0.00 4.95
7391 10019 2.472695 TTCGCCAAACATCAGCTAGT 57.527 45.000 0.00 0.00 0.00 2.57
7407 10035 0.921347 CTTCGGCGGATAGTGTTTCG 59.079 55.000 7.21 0.00 0.00 3.46
7409 10037 3.598019 TTACTTCGGCGGATAGTGTTT 57.402 42.857 7.21 0.00 0.00 2.83
7412 10040 5.924254 TCAATAATTACTTCGGCGGATAGTG 59.076 40.000 7.21 0.00 0.00 2.74
7439 10069 5.013391 ACATCCTGTATCACATATGCCATGA 59.987 40.000 1.58 0.00 29.48 3.07
7459 10089 6.570692 TCTTTTCGAGATAGGTTACCACATC 58.429 40.000 3.51 6.05 0.00 3.06
7493 10123 5.065474 GCAACGCCCAGTCAATAATTACTTA 59.935 40.000 0.00 0.00 0.00 2.24
7540 10170 1.727335 GAAGGTGCGAGCTCAAGTTAC 59.273 52.381 15.40 4.55 0.00 2.50
7541 10171 1.618837 AGAAGGTGCGAGCTCAAGTTA 59.381 47.619 15.40 0.00 0.00 2.24
7542 10172 0.394565 AGAAGGTGCGAGCTCAAGTT 59.605 50.000 15.40 0.00 0.00 2.66
7543 10173 0.394565 AAGAAGGTGCGAGCTCAAGT 59.605 50.000 15.40 0.00 0.00 3.16
7585 10220 3.515502 ACAGTCTTACATAGCCTGCTGAA 59.484 43.478 0.97 0.00 0.00 3.02
7586 10221 3.099905 ACAGTCTTACATAGCCTGCTGA 58.900 45.455 0.97 0.00 0.00 4.26
7587 10222 3.533606 ACAGTCTTACATAGCCTGCTG 57.466 47.619 0.97 0.00 0.00 4.41
7588 10223 5.453903 CCATAACAGTCTTACATAGCCTGCT 60.454 44.000 0.00 0.00 0.00 4.24
7589 10224 4.752101 CCATAACAGTCTTACATAGCCTGC 59.248 45.833 0.00 0.00 0.00 4.85
7590 10225 5.918608 ACCATAACAGTCTTACATAGCCTG 58.081 41.667 0.00 0.00 0.00 4.85
7591 10226 6.839657 ACTACCATAACAGTCTTACATAGCCT 59.160 38.462 0.00 0.00 0.00 4.58
7592 10227 7.052142 ACTACCATAACAGTCTTACATAGCC 57.948 40.000 0.00 0.00 0.00 3.93
7621 10274 1.202818 ACACTTCCAACCTCCTTCAGC 60.203 52.381 0.00 0.00 0.00 4.26
7710 10366 3.245284 CGACCGGCAAGATGTATGTAAAG 59.755 47.826 0.00 0.00 0.00 1.85
7733 10392 0.386985 GTCGGATCGGATAGGCGTTC 60.387 60.000 6.23 0.00 0.00 3.95
7736 10395 1.924320 GAGGTCGGATCGGATAGGCG 61.924 65.000 6.23 0.00 0.00 5.52
7860 10528 4.530857 GGCGGACCTGGTCATCGG 62.531 72.222 26.94 14.09 33.68 4.18
7926 10594 2.444895 GGAGGGCGAGGTGAGGAT 60.445 66.667 0.00 0.00 0.00 3.24
7930 10598 1.682684 GAGAAGGAGGGCGAGGTGA 60.683 63.158 0.00 0.00 0.00 4.02
7945 10622 2.683933 GTGGCGAGGGGAAGGAGA 60.684 66.667 0.00 0.00 0.00 3.71
8014 10691 0.863799 CATCGCCATGGACTTCATCG 59.136 55.000 18.40 7.71 32.92 3.84
8240 10917 2.280524 CGCAAGGTGTTCCGGTCA 60.281 61.111 0.00 0.00 39.05 4.02



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.