Multiple sequence alignment - TraesCS2A01G367200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G367200 chr2A 100.000 3225 0 0 1 3225 611283455 611280231 0.000000e+00 5956.0
1 TraesCS2A01G367200 chr2A 79.755 163 30 3 1197 1356 631789110 631789272 7.310000e-22 115.0
2 TraesCS2A01G367200 chr2D 90.500 2379 134 45 1 2335 469980367 469978037 0.000000e+00 3057.0
3 TraesCS2A01G367200 chr2D 95.745 94 2 1 2685 2776 423859912 423859819 2.000000e-32 150.0
4 TraesCS2A01G367200 chr2D 94.792 96 5 0 2677 2772 469977679 469977584 2.000000e-32 150.0
5 TraesCS2A01G367200 chr2D 82.249 169 16 10 2474 2640 469977929 469977773 2.020000e-27 134.0
6 TraesCS2A01G367200 chr2B 91.590 1308 76 13 272 1566 548513682 548512396 0.000000e+00 1775.0
7 TraesCS2A01G367200 chr2B 84.889 900 63 35 1600 2465 548512255 548511395 0.000000e+00 841.0
8 TraesCS2A01G367200 chr2B 86.691 278 21 2 2677 2953 548511219 548510957 8.750000e-76 294.0
9 TraesCS2A01G367200 chr3B 98.901 91 0 1 2681 2771 805612356 805612445 9.260000e-36 161.0
10 TraesCS2A01G367200 chr3B 98.901 91 0 1 2681 2771 805619145 805619234 9.260000e-36 161.0
11 TraesCS2A01G367200 chr3D 97.778 90 0 2 2686 2773 598715473 598715384 1.550000e-33 154.0
12 TraesCS2A01G367200 chr3D 91.667 108 5 4 2670 2775 610153645 610153540 2.590000e-31 147.0
13 TraesCS2A01G367200 chr5B 96.739 92 2 1 2677 2767 437910239 437910330 5.570000e-33 152.0
14 TraesCS2A01G367200 chr3A 95.789 95 1 2 2679 2771 744059861 744059768 2.000000e-32 150.0
15 TraesCS2A01G367200 chr3A 92.857 42 1 2 162 202 661605009 661604969 3.470000e-05 60.2
16 TraesCS2A01G367200 chr1D 88.406 69 6 2 136 204 349187599 349187533 7.420000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G367200 chr2A 611280231 611283455 3224 True 5956.000000 5956 100.000000 1 3225 1 chr2A.!!$R1 3224
1 TraesCS2A01G367200 chr2D 469977584 469980367 2783 True 1113.666667 3057 89.180333 1 2772 3 chr2D.!!$R2 2771
2 TraesCS2A01G367200 chr2B 548510957 548513682 2725 True 970.000000 1775 87.723333 272 2953 3 chr2B.!!$R1 2681

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
570 604 0.527817 GATTCCGTGAGTAGGTGCGG 60.528 60.0 0.0 0.0 44.95 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2492 2689 0.099791 TGCGTATCTGCAATCGACGA 59.9 50.0 12.61 0.0 43.02 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 7.055667 TGTATAAACATTTTTGAAGGCCACA 57.944 32.000 5.01 1.11 0.00 4.17
62 63 6.742082 GCCACAAACATATTATTGGGATGCAT 60.742 38.462 0.00 0.00 31.50 3.96
64 65 6.647481 CACAAACATATTATTGGGATGCATGG 59.353 38.462 2.46 0.00 31.50 3.66
67 68 4.701651 ACATATTATTGGGATGCATGGACG 59.298 41.667 2.46 0.00 0.00 4.79
70 71 1.392589 ATTGGGATGCATGGACGTTC 58.607 50.000 2.46 0.00 0.00 3.95
75 76 2.231235 GGGATGCATGGACGTTCTTTTT 59.769 45.455 2.46 0.00 0.00 1.94
76 77 3.442273 GGGATGCATGGACGTTCTTTTTA 59.558 43.478 2.46 0.00 0.00 1.52
77 78 4.082463 GGGATGCATGGACGTTCTTTTTAA 60.082 41.667 2.46 0.00 0.00 1.52
78 79 5.465935 GGATGCATGGACGTTCTTTTTAAA 58.534 37.500 2.46 0.00 0.00 1.52
79 80 6.099341 GGATGCATGGACGTTCTTTTTAAAT 58.901 36.000 2.46 0.00 0.00 1.40
80 81 6.589907 GGATGCATGGACGTTCTTTTTAAATT 59.410 34.615 2.46 0.00 0.00 1.82
170 173 6.817641 TCAATGTTTTCTTTGCAAATGTGACT 59.182 30.769 13.23 0.00 35.70 3.41
230 254 4.497608 CGCAAACATTTAAACACGTGAACT 59.502 37.500 25.01 8.28 0.00 3.01
317 345 4.258704 CCGCATTAACATTTTTAACGCGTC 60.259 41.667 14.44 0.00 42.59 5.19
402 433 6.293081 CGAAATATAAACAGAGGCTGATGTGG 60.293 42.308 0.00 0.00 35.18 4.17
414 445 1.898574 GATGTGGGCGCTTATGGGG 60.899 63.158 7.64 0.00 0.00 4.96
570 604 0.527817 GATTCCGTGAGTAGGTGCGG 60.528 60.000 0.00 0.00 44.95 5.69
745 787 3.730761 GCACTCCACAGCTTGCCG 61.731 66.667 0.00 0.00 0.00 5.69
931 973 3.453679 GCGAGGGGAAGAGCGACT 61.454 66.667 0.00 0.00 0.00 4.18
1012 1054 4.408821 GCAGCATGGTCGGGGACA 62.409 66.667 0.00 0.00 35.86 4.02
1108 1150 3.749064 GCGACCTCGAGGAGCACA 61.749 66.667 37.69 0.00 43.02 4.57
1137 1179 1.059369 CTGTGAGCAACGCATACGC 59.941 57.895 0.00 0.00 45.53 4.42
1153 1195 0.955428 ACGCACATCTGCCATTTCGT 60.955 50.000 0.00 0.00 40.73 3.85
1176 1218 4.508461 TTTTCACTGGCATGTTCTGATG 57.492 40.909 0.00 0.00 0.00 3.07
1177 1219 2.865119 TCACTGGCATGTTCTGATGT 57.135 45.000 0.00 0.00 0.00 3.06
1179 1221 4.284829 TCACTGGCATGTTCTGATGTTA 57.715 40.909 0.00 0.00 0.00 2.41
1180 1222 4.256110 TCACTGGCATGTTCTGATGTTAG 58.744 43.478 0.00 0.00 0.00 2.34
1201 1243 2.409948 AATAACTGGGCTGAGCAGAC 57.590 50.000 6.82 0.00 35.10 3.51
1361 1403 3.873952 GGAGACTTACGATGGTACGTACT 59.126 47.826 24.07 6.42 46.00 2.73
1362 1404 5.050490 GGAGACTTACGATGGTACGTACTA 58.950 45.833 24.07 19.58 46.00 1.82
1363 1405 5.050702 GGAGACTTACGATGGTACGTACTAC 60.051 48.000 24.07 14.38 46.00 2.73
1412 1454 0.953960 GTGATTTCAGTTCGGCCGGT 60.954 55.000 27.83 7.64 0.00 5.28
1451 1495 3.249320 GTCTTCCTTTTTGTCCGTGTACC 59.751 47.826 0.00 0.00 0.00 3.34
1452 1496 3.135167 TCTTCCTTTTTGTCCGTGTACCT 59.865 43.478 0.00 0.00 0.00 3.08
1453 1497 4.344679 TCTTCCTTTTTGTCCGTGTACCTA 59.655 41.667 0.00 0.00 0.00 3.08
1454 1498 3.993920 TCCTTTTTGTCCGTGTACCTAC 58.006 45.455 0.00 0.00 0.00 3.18
1496 1540 2.182904 GTTGGGTTCAACGTGTTCAC 57.817 50.000 0.00 0.00 42.99 3.18
1609 1763 4.393062 CCGTGCTTCATTCAGTCTTTGTAT 59.607 41.667 0.00 0.00 0.00 2.29
1610 1764 5.580691 CCGTGCTTCATTCAGTCTTTGTATA 59.419 40.000 0.00 0.00 0.00 1.47
1624 1778 6.701841 AGTCTTTGTATATGTATTGACTGCGG 59.298 38.462 0.00 0.00 33.09 5.69
1628 1782 6.597262 TGTATATGTATTGACTGCGGTTTG 57.403 37.500 0.00 0.00 0.00 2.93
1629 1783 6.110033 TGTATATGTATTGACTGCGGTTTGT 58.890 36.000 0.00 0.00 0.00 2.83
1630 1784 3.829886 ATGTATTGACTGCGGTTTGTG 57.170 42.857 0.00 0.00 0.00 3.33
1631 1785 1.876799 TGTATTGACTGCGGTTTGTGG 59.123 47.619 0.00 0.00 0.00 4.17
1632 1786 0.878416 TATTGACTGCGGTTTGTGGC 59.122 50.000 0.00 0.00 0.00 5.01
1633 1787 1.805428 ATTGACTGCGGTTTGTGGCC 61.805 55.000 0.00 0.00 0.00 5.36
1753 1910 2.100418 GGAGGGTCGGTATGTTGTAGTC 59.900 54.545 0.00 0.00 0.00 2.59
1755 1912 1.745087 GGGTCGGTATGTTGTAGTCGA 59.255 52.381 0.00 0.00 0.00 4.20
1756 1913 2.360165 GGGTCGGTATGTTGTAGTCGAT 59.640 50.000 0.00 0.00 0.00 3.59
1757 1914 3.549625 GGGTCGGTATGTTGTAGTCGATC 60.550 52.174 0.00 0.00 0.00 3.69
1759 1916 4.512944 GGTCGGTATGTTGTAGTCGATCTA 59.487 45.833 0.00 0.00 0.00 1.98
1761 1918 6.293845 GGTCGGTATGTTGTAGTCGATCTAAT 60.294 42.308 0.00 0.00 0.00 1.73
1763 1920 7.646922 GTCGGTATGTTGTAGTCGATCTAATTT 59.353 37.037 0.00 0.00 0.00 1.82
1764 1921 8.839343 TCGGTATGTTGTAGTCGATCTAATTTA 58.161 33.333 0.00 0.00 0.00 1.40
1765 1922 8.899776 CGGTATGTTGTAGTCGATCTAATTTAC 58.100 37.037 0.00 0.00 0.00 2.01
1768 1925 7.751047 TGTTGTAGTCGATCTAATTTACAGC 57.249 36.000 0.00 0.00 0.00 4.40
1769 1926 7.317390 TGTTGTAGTCGATCTAATTTACAGCA 58.683 34.615 0.00 0.00 32.43 4.41
1771 1928 7.987268 TGTAGTCGATCTAATTTACAGCAAG 57.013 36.000 0.00 0.00 0.00 4.01
1772 1929 5.975410 AGTCGATCTAATTTACAGCAAGC 57.025 39.130 0.00 0.00 0.00 4.01
1773 1930 5.419542 AGTCGATCTAATTTACAGCAAGCA 58.580 37.500 0.00 0.00 0.00 3.91
1775 1932 6.036517 AGTCGATCTAATTTACAGCAAGCAAG 59.963 38.462 0.00 0.00 0.00 4.01
1777 1934 6.371548 TCGATCTAATTTACAGCAAGCAAGTT 59.628 34.615 0.00 0.00 0.00 2.66
1780 1937 7.737972 TCTAATTTACAGCAAGCAAGTTACA 57.262 32.000 0.00 0.00 0.00 2.41
1781 1938 7.581476 TCTAATTTACAGCAAGCAAGTTACAC 58.419 34.615 0.00 0.00 0.00 2.90
1782 1939 5.766150 ATTTACAGCAAGCAAGTTACACA 57.234 34.783 0.00 0.00 0.00 3.72
1783 1940 5.766150 TTTACAGCAAGCAAGTTACACAT 57.234 34.783 0.00 0.00 0.00 3.21
1784 1941 3.631145 ACAGCAAGCAAGTTACACATG 57.369 42.857 0.00 0.00 0.00 3.21
1785 1942 2.287788 ACAGCAAGCAAGTTACACATGC 60.288 45.455 0.00 0.00 42.54 4.06
1787 1944 1.334960 GCAAGCAAGTTACACATGCGT 60.335 47.619 0.00 0.00 46.28 5.24
1789 1946 1.877637 AGCAAGTTACACATGCGTGA 58.122 45.000 14.17 0.00 46.28 4.35
1790 1947 1.800586 AGCAAGTTACACATGCGTGAG 59.199 47.619 14.17 7.47 46.28 3.51
1791 1948 1.798223 GCAAGTTACACATGCGTGAGA 59.202 47.619 14.17 0.00 46.80 3.27
1794 1951 4.211389 CAAGTTACACATGCGTGAGAAAC 58.789 43.478 14.17 12.44 46.80 2.78
1795 1952 3.728845 AGTTACACATGCGTGAGAAACT 58.271 40.909 14.17 14.37 46.80 2.66
1797 1954 4.211374 AGTTACACATGCGTGAGAAACTTC 59.789 41.667 14.17 0.00 46.80 3.01
1799 1956 2.545526 ACACATGCGTGAGAAACTTCAG 59.454 45.455 14.17 0.00 46.80 3.02
1801 1958 2.802816 ACATGCGTGAGAAACTTCAGAC 59.197 45.455 14.17 0.00 0.00 3.51
1802 1959 2.595124 TGCGTGAGAAACTTCAGACA 57.405 45.000 0.00 0.00 0.00 3.41
1937 2097 1.443872 CGGGAGGTGTTCGACTTCG 60.444 63.158 0.00 0.00 41.45 3.79
1956 2116 1.404391 CGTCGGCTGGTAACTGACTAT 59.596 52.381 0.00 0.00 42.42 2.12
1957 2117 2.615447 CGTCGGCTGGTAACTGACTATA 59.385 50.000 0.00 0.00 42.42 1.31
1958 2118 3.252701 CGTCGGCTGGTAACTGACTATAT 59.747 47.826 0.00 0.00 42.42 0.86
1959 2119 4.453478 CGTCGGCTGGTAACTGACTATATA 59.547 45.833 0.00 0.00 42.42 0.86
1960 2120 5.123502 CGTCGGCTGGTAACTGACTATATAT 59.876 44.000 0.00 0.00 42.42 0.86
1961 2121 6.314648 CGTCGGCTGGTAACTGACTATATATA 59.685 42.308 0.00 0.00 42.42 0.86
2042 2206 4.827692 TGTTGTATAGCTAACTGGTGTGG 58.172 43.478 0.00 0.00 0.00 4.17
2043 2207 4.189231 GTTGTATAGCTAACTGGTGTGGG 58.811 47.826 0.00 0.00 0.00 4.61
2044 2208 3.715287 TGTATAGCTAACTGGTGTGGGA 58.285 45.455 0.00 0.00 0.00 4.37
2045 2209 4.295201 TGTATAGCTAACTGGTGTGGGAT 58.705 43.478 0.00 0.00 0.00 3.85
2046 2210 3.845781 ATAGCTAACTGGTGTGGGATG 57.154 47.619 0.00 0.00 0.00 3.51
2047 2211 0.620556 AGCTAACTGGTGTGGGATGG 59.379 55.000 0.00 0.00 0.00 3.51
2066 2230 1.375610 GGATGGGATGGATGGATGGA 58.624 55.000 0.00 0.00 0.00 3.41
2067 2231 1.928077 GGATGGGATGGATGGATGGAT 59.072 52.381 0.00 0.00 0.00 3.41
2070 2234 4.202545 GGATGGGATGGATGGATGGATATC 60.203 50.000 0.00 0.00 0.00 1.63
2102 2266 0.318762 GAAGCTGGAGTGGTCGTTCT 59.681 55.000 0.00 0.00 0.00 3.01
2228 2392 3.622828 CACGTCAAGATGTCCTAGATCG 58.377 50.000 0.00 0.00 0.00 3.69
2230 2394 2.605823 CGTCAAGATGTCCTAGATCGCC 60.606 54.545 0.00 0.00 0.00 5.54
2232 2396 1.338337 CAAGATGTCCTAGATCGCCGT 59.662 52.381 0.00 0.00 0.00 5.68
2233 2397 0.955178 AGATGTCCTAGATCGCCGTG 59.045 55.000 0.00 0.00 0.00 4.94
2235 2399 0.385751 ATGTCCTAGATCGCCGTGTG 59.614 55.000 0.00 0.00 0.00 3.82
2236 2400 0.963856 TGTCCTAGATCGCCGTGTGT 60.964 55.000 0.00 0.00 0.00 3.72
2261 2425 4.227134 CGGTGGATCTCGCAGGGG 62.227 72.222 0.00 0.00 0.00 4.79
2297 2461 0.396435 TGTGATGCTTTCCGTGTCCT 59.604 50.000 0.00 0.00 0.00 3.85
2362 2550 9.702726 AAACATAAATAACGCGATATGATATGC 57.297 29.630 25.59 0.00 31.71 3.14
2368 2556 4.385358 ACGCGATATGATATGCCATGTA 57.615 40.909 15.93 0.00 0.00 2.29
2369 2557 4.112634 ACGCGATATGATATGCCATGTAC 58.887 43.478 15.93 0.00 0.00 2.90
2370 2558 4.142160 ACGCGATATGATATGCCATGTACT 60.142 41.667 15.93 0.00 0.00 2.73
2371 2559 4.442403 CGCGATATGATATGCCATGTACTC 59.558 45.833 0.00 0.00 0.00 2.59
2390 2578 1.626321 TCTTGAATGTTCAGCCCCGTA 59.374 47.619 0.00 0.00 38.61 4.02
2454 2651 2.667199 TCGACGGTCGACTGCAGA 60.667 61.111 27.66 19.43 44.82 4.26
2455 2652 2.038837 TCGACGGTCGACTGCAGAT 61.039 57.895 27.66 4.45 44.82 2.90
2456 2653 0.741927 TCGACGGTCGACTGCAGATA 60.742 55.000 27.66 3.92 44.82 1.98
2457 2654 0.316278 CGACGGTCGACTGCAGATAG 60.316 60.000 25.29 11.01 43.74 2.08
2458 2655 1.015109 GACGGTCGACTGCAGATAGA 58.985 55.000 24.25 13.28 0.00 1.98
2459 2656 1.604755 GACGGTCGACTGCAGATAGAT 59.395 52.381 24.25 1.61 0.00 1.98
2460 2657 2.806818 GACGGTCGACTGCAGATAGATA 59.193 50.000 24.25 0.00 0.00 1.98
2461 2658 2.548904 ACGGTCGACTGCAGATAGATAC 59.451 50.000 24.25 9.03 0.00 2.24
2462 2659 2.548480 CGGTCGACTGCAGATAGATACA 59.452 50.000 23.35 0.00 0.00 2.29
2463 2660 3.364465 CGGTCGACTGCAGATAGATACAG 60.364 52.174 23.35 6.45 36.22 2.74
2464 2661 3.815962 GGTCGACTGCAGATAGATACAGA 59.184 47.826 23.35 3.01 34.25 3.41
2465 2662 4.457603 GGTCGACTGCAGATAGATACAGAT 59.542 45.833 23.35 0.00 34.25 2.90
2466 2663 5.644206 GGTCGACTGCAGATAGATACAGATA 59.356 44.000 23.35 0.00 34.25 1.98
2467 2664 6.317642 GGTCGACTGCAGATAGATACAGATAT 59.682 42.308 23.35 0.00 34.25 1.63
2468 2665 7.148154 GGTCGACTGCAGATAGATACAGATATT 60.148 40.741 23.35 0.00 34.25 1.28
2469 2666 7.908082 GTCGACTGCAGATAGATACAGATATTC 59.092 40.741 23.35 0.00 34.25 1.75
2470 2667 7.066404 TCGACTGCAGATAGATACAGATATTCC 59.934 40.741 23.35 0.00 34.25 3.01
2471 2668 7.416964 ACTGCAGATAGATACAGATATTCCC 57.583 40.000 23.35 0.00 34.25 3.97
2472 2669 7.188381 ACTGCAGATAGATACAGATATTCCCT 58.812 38.462 23.35 0.00 34.25 4.20
2473 2670 7.677745 ACTGCAGATAGATACAGATATTCCCTT 59.322 37.037 23.35 0.00 34.25 3.95
2474 2671 8.072321 TGCAGATAGATACAGATATTCCCTTC 57.928 38.462 0.00 0.00 0.00 3.46
2475 2672 7.898100 TGCAGATAGATACAGATATTCCCTTCT 59.102 37.037 0.00 0.00 0.00 2.85
2476 2673 8.757877 GCAGATAGATACAGATATTCCCTTCTT 58.242 37.037 0.00 0.00 0.00 2.52
2478 2675 9.487442 AGATAGATACAGATATTCCCTTCTTCC 57.513 37.037 0.00 0.00 0.00 3.46
2479 2676 6.943899 AGATACAGATATTCCCTTCTTCCC 57.056 41.667 0.00 0.00 0.00 3.97
2480 2677 5.788014 AGATACAGATATTCCCTTCTTCCCC 59.212 44.000 0.00 0.00 0.00 4.81
2481 2678 3.056832 ACAGATATTCCCTTCTTCCCCC 58.943 50.000 0.00 0.00 0.00 5.40
2482 2679 2.039084 CAGATATTCCCTTCTTCCCCCG 59.961 54.545 0.00 0.00 0.00 5.73
2483 2680 1.351350 GATATTCCCTTCTTCCCCCGG 59.649 57.143 0.00 0.00 0.00 5.73
2484 2681 0.696485 TATTCCCTTCTTCCCCCGGG 60.696 60.000 15.80 15.80 38.07 5.73
2506 2703 1.269166 GAACGTCGTCGATTGCAGAT 58.731 50.000 9.47 0.00 40.62 2.90
2507 2704 2.447250 GAACGTCGTCGATTGCAGATA 58.553 47.619 9.47 0.00 40.62 1.98
2508 2705 1.823828 ACGTCGTCGATTGCAGATAC 58.176 50.000 9.47 0.00 40.62 2.24
2524 2721 4.142271 GCAGATACGCAGATAGATAAGGCT 60.142 45.833 0.00 0.00 0.00 4.58
2529 2726 1.719600 CAGATAGATAAGGCTGGCGC 58.280 55.000 0.00 0.00 0.00 6.53
2641 2862 2.158475 TGCTTCCTTCACAATGGTTCCT 60.158 45.455 0.00 0.00 0.00 3.36
2642 2863 2.489722 GCTTCCTTCACAATGGTTCCTC 59.510 50.000 0.00 0.00 0.00 3.71
2643 2864 2.879103 TCCTTCACAATGGTTCCTCC 57.121 50.000 0.00 0.00 0.00 4.30
2647 2924 1.348064 TCACAATGGTTCCTCCGACT 58.652 50.000 0.00 0.00 39.52 4.18
2650 2927 2.226437 CACAATGGTTCCTCCGACTTTG 59.774 50.000 0.00 0.00 39.52 2.77
2660 2937 8.102047 TGGTTCCTCCGACTTTGTTTATATAAA 58.898 33.333 3.71 3.71 39.52 1.40
2683 2961 4.462483 ACATTTTCATCCCAACGTAGCAAT 59.538 37.500 0.00 0.00 0.00 3.56
2802 3081 3.475566 TCCTCAGAATTATTCCTGGCG 57.524 47.619 0.78 0.00 0.00 5.69
2812 3091 7.592533 CAGAATTATTCCTGGCGACATAAAATG 59.407 37.037 0.00 0.00 41.51 2.32
2817 3096 5.499139 TCCTGGCGACATAAAATGATTTC 57.501 39.130 0.00 0.00 41.51 2.17
2821 3100 5.406649 TGGCGACATAAAATGATTTCAACC 58.593 37.500 0.00 0.00 33.40 3.77
2833 3112 7.910441 AATGATTTCAACCTTATTTGCTTGG 57.090 32.000 0.00 0.00 0.00 3.61
2844 3123 9.537192 AACCTTATTTGCTTGGTTTTTAGTTAC 57.463 29.630 0.00 0.00 39.48 2.50
2845 3124 8.145767 ACCTTATTTGCTTGGTTTTTAGTTACC 58.854 33.333 0.00 0.00 34.93 2.85
2846 3125 7.327518 CCTTATTTGCTTGGTTTTTAGTTACCG 59.672 37.037 0.00 0.00 37.23 4.02
2867 3146 4.392921 GACAGCATGGCTCTTAGTTAGA 57.607 45.455 0.00 0.00 44.72 2.10
2900 3179 1.769733 TGAAGCAGCACGCAATTTTC 58.230 45.000 0.00 0.00 46.13 2.29
2902 3181 1.717645 GAAGCAGCACGCAATTTTCAG 59.282 47.619 0.00 0.00 46.13 3.02
2941 3220 2.096466 CGCTGCTACAAATTTGTCACGA 60.096 45.455 26.46 9.09 42.35 4.35
2953 3232 1.592064 TGTCACGAGCAAGCAATTCA 58.408 45.000 0.00 0.00 0.00 2.57
2954 3233 2.153645 TGTCACGAGCAAGCAATTCAT 58.846 42.857 0.00 0.00 0.00 2.57
2955 3234 3.333804 TGTCACGAGCAAGCAATTCATA 58.666 40.909 0.00 0.00 0.00 2.15
2956 3235 3.125146 TGTCACGAGCAAGCAATTCATAC 59.875 43.478 0.00 0.00 0.00 2.39
2957 3236 2.677836 TCACGAGCAAGCAATTCATACC 59.322 45.455 0.00 0.00 0.00 2.73
2958 3237 2.017049 ACGAGCAAGCAATTCATACCC 58.983 47.619 0.00 0.00 0.00 3.69
2959 3238 2.292267 CGAGCAAGCAATTCATACCCT 58.708 47.619 0.00 0.00 0.00 4.34
2960 3239 3.118408 ACGAGCAAGCAATTCATACCCTA 60.118 43.478 0.00 0.00 0.00 3.53
2961 3240 3.876914 CGAGCAAGCAATTCATACCCTAA 59.123 43.478 0.00 0.00 0.00 2.69
2962 3241 4.516698 CGAGCAAGCAATTCATACCCTAAT 59.483 41.667 0.00 0.00 0.00 1.73
2963 3242 5.009010 CGAGCAAGCAATTCATACCCTAATT 59.991 40.000 0.00 0.00 0.00 1.40
2964 3243 6.204688 CGAGCAAGCAATTCATACCCTAATTA 59.795 38.462 0.00 0.00 0.00 1.40
2965 3244 7.277174 AGCAAGCAATTCATACCCTAATTAC 57.723 36.000 0.00 0.00 0.00 1.89
2966 3245 7.062957 AGCAAGCAATTCATACCCTAATTACT 58.937 34.615 0.00 0.00 0.00 2.24
2967 3246 7.013655 AGCAAGCAATTCATACCCTAATTACTG 59.986 37.037 0.00 0.00 0.00 2.74
2968 3247 7.013274 GCAAGCAATTCATACCCTAATTACTGA 59.987 37.037 0.00 0.00 0.00 3.41
2969 3248 8.902806 CAAGCAATTCATACCCTAATTACTGAA 58.097 33.333 0.00 0.00 0.00 3.02
2970 3249 9.474313 AAGCAATTCATACCCTAATTACTGAAA 57.526 29.630 0.00 0.00 0.00 2.69
2971 3250 9.474313 AGCAATTCATACCCTAATTACTGAAAA 57.526 29.630 0.00 0.00 0.00 2.29
2980 3259 8.007405 ACCCTAATTACTGAAAATACCAATGC 57.993 34.615 0.00 0.00 0.00 3.56
2981 3260 7.138736 CCCTAATTACTGAAAATACCAATGCG 58.861 38.462 0.00 0.00 0.00 4.73
2982 3261 6.636850 CCTAATTACTGAAAATACCAATGCGC 59.363 38.462 0.00 0.00 0.00 6.09
2983 3262 2.542766 ACTGAAAATACCAATGCGCG 57.457 45.000 0.00 0.00 0.00 6.86
2984 3263 1.810151 ACTGAAAATACCAATGCGCGT 59.190 42.857 8.43 0.00 0.00 6.01
2985 3264 3.004171 ACTGAAAATACCAATGCGCGTA 58.996 40.909 8.43 2.40 0.00 4.42
2986 3265 3.181514 ACTGAAAATACCAATGCGCGTAC 60.182 43.478 8.43 0.00 0.00 3.67
2987 3266 2.742589 TGAAAATACCAATGCGCGTACA 59.257 40.909 8.43 0.00 0.00 2.90
2988 3267 3.188667 TGAAAATACCAATGCGCGTACAA 59.811 39.130 8.43 0.00 0.00 2.41
2989 3268 3.833545 AAATACCAATGCGCGTACAAA 57.166 38.095 8.43 0.00 0.00 2.83
2990 3269 3.833545 AATACCAATGCGCGTACAAAA 57.166 38.095 8.43 0.00 0.00 2.44
2991 3270 2.598000 TACCAATGCGCGTACAAAAC 57.402 45.000 8.43 0.00 0.00 2.43
2992 3271 0.663688 ACCAATGCGCGTACAAAACA 59.336 45.000 8.43 0.00 0.00 2.83
2993 3272 1.065701 ACCAATGCGCGTACAAAACAA 59.934 42.857 8.43 0.00 0.00 2.83
2994 3273 2.287909 ACCAATGCGCGTACAAAACAAT 60.288 40.909 8.43 0.00 0.00 2.71
2995 3274 2.090349 CCAATGCGCGTACAAAACAATG 59.910 45.455 8.43 0.00 0.00 2.82
2996 3275 2.697431 ATGCGCGTACAAAACAATGT 57.303 40.000 8.43 0.00 37.32 2.71
2997 3276 2.476873 TGCGCGTACAAAACAATGTT 57.523 40.000 8.43 0.00 34.75 2.71
2998 3277 2.112522 TGCGCGTACAAAACAATGTTG 58.887 42.857 8.43 0.00 34.75 3.33
2999 3278 1.137019 GCGCGTACAAAACAATGTTGC 60.137 47.619 8.43 0.00 34.75 4.17
3000 3279 2.380660 CGCGTACAAAACAATGTTGCT 58.619 42.857 0.00 0.00 33.72 3.91
3001 3280 2.150985 CGCGTACAAAACAATGTTGCTG 59.849 45.455 0.00 3.20 33.72 4.41
3002 3281 2.097444 GCGTACAAAACAATGTTGCTGC 60.097 45.455 0.00 0.00 34.75 5.25
3003 3282 3.371168 CGTACAAAACAATGTTGCTGCT 58.629 40.909 0.00 0.00 34.75 4.24
3004 3283 3.180189 CGTACAAAACAATGTTGCTGCTG 59.820 43.478 0.00 0.00 34.75 4.41
3005 3284 1.935199 ACAAAACAATGTTGCTGCTGC 59.065 42.857 8.89 8.89 40.20 5.25
3006 3285 1.262151 CAAAACAATGTTGCTGCTGCC 59.738 47.619 13.47 0.00 38.71 4.85
3007 3286 0.754472 AAACAATGTTGCTGCTGCCT 59.246 45.000 13.47 0.00 38.71 4.75
3008 3287 0.316204 AACAATGTTGCTGCTGCCTC 59.684 50.000 13.47 6.63 38.71 4.70
3009 3288 1.214589 CAATGTTGCTGCTGCCTCC 59.785 57.895 13.47 1.44 38.71 4.30
3010 3289 2.338015 AATGTTGCTGCTGCCTCCG 61.338 57.895 13.47 0.00 38.71 4.63
3011 3290 3.557903 ATGTTGCTGCTGCCTCCGT 62.558 57.895 13.47 0.00 38.71 4.69
3012 3291 3.426568 GTTGCTGCTGCCTCCGTC 61.427 66.667 13.47 0.00 38.71 4.79
3013 3292 4.704833 TTGCTGCTGCCTCCGTCC 62.705 66.667 13.47 0.00 38.71 4.79
3016 3295 3.699894 CTGCTGCCTCCGTCCTGT 61.700 66.667 0.00 0.00 0.00 4.00
3017 3296 2.283604 TGCTGCCTCCGTCCTGTA 60.284 61.111 0.00 0.00 0.00 2.74
3018 3297 1.888436 CTGCTGCCTCCGTCCTGTAA 61.888 60.000 0.00 0.00 0.00 2.41
3019 3298 1.264749 TGCTGCCTCCGTCCTGTAAT 61.265 55.000 0.00 0.00 0.00 1.89
3020 3299 0.811616 GCTGCCTCCGTCCTGTAATG 60.812 60.000 0.00 0.00 0.00 1.90
3021 3300 0.537188 CTGCCTCCGTCCTGTAATGT 59.463 55.000 0.00 0.00 0.00 2.71
3022 3301 1.754803 CTGCCTCCGTCCTGTAATGTA 59.245 52.381 0.00 0.00 0.00 2.29
3023 3302 2.167693 CTGCCTCCGTCCTGTAATGTAA 59.832 50.000 0.00 0.00 0.00 2.41
3024 3303 2.167693 TGCCTCCGTCCTGTAATGTAAG 59.832 50.000 0.00 0.00 0.00 2.34
3025 3304 2.167900 GCCTCCGTCCTGTAATGTAAGT 59.832 50.000 0.00 0.00 0.00 2.24
3026 3305 3.369157 GCCTCCGTCCTGTAATGTAAGTT 60.369 47.826 0.00 0.00 0.00 2.66
3027 3306 4.828829 CCTCCGTCCTGTAATGTAAGTTT 58.171 43.478 0.00 0.00 0.00 2.66
3028 3307 5.625197 GCCTCCGTCCTGTAATGTAAGTTTA 60.625 44.000 0.00 0.00 0.00 2.01
3029 3308 5.809051 CCTCCGTCCTGTAATGTAAGTTTAC 59.191 44.000 0.00 0.00 0.00 2.01
3030 3309 6.343716 TCCGTCCTGTAATGTAAGTTTACA 57.656 37.500 7.14 7.14 46.55 2.41
3031 3310 6.757237 TCCGTCCTGTAATGTAAGTTTACAA 58.243 36.000 8.62 0.00 45.74 2.41
3032 3311 6.869913 TCCGTCCTGTAATGTAAGTTTACAAG 59.130 38.462 8.62 2.53 45.74 3.16
3033 3312 6.401796 CCGTCCTGTAATGTAAGTTTACAAGC 60.402 42.308 8.62 3.73 45.74 4.01
3034 3313 6.367969 CGTCCTGTAATGTAAGTTTACAAGCT 59.632 38.462 8.62 0.00 45.74 3.74
3035 3314 7.543172 CGTCCTGTAATGTAAGTTTACAAGCTA 59.457 37.037 8.62 0.00 45.74 3.32
3036 3315 9.379791 GTCCTGTAATGTAAGTTTACAAGCTAT 57.620 33.333 8.62 0.00 45.74 2.97
3048 3327 9.649167 AAGTTTACAAGCTATAATGTAAGACGT 57.351 29.630 8.35 0.00 41.52 4.34
3049 3328 9.649167 AGTTTACAAGCTATAATGTAAGACGTT 57.351 29.630 8.35 0.00 41.52 3.99
3078 3357 6.317910 GTGAAACTTTTTAACACAGTGCAG 57.682 37.500 0.00 0.00 0.00 4.41
3079 3358 6.090129 GTGAAACTTTTTAACACAGTGCAGA 58.910 36.000 0.00 0.00 0.00 4.26
3080 3359 6.584563 GTGAAACTTTTTAACACAGTGCAGAA 59.415 34.615 0.00 0.00 0.00 3.02
3081 3360 6.806249 TGAAACTTTTTAACACAGTGCAGAAG 59.194 34.615 0.00 1.32 0.00 2.85
3082 3361 5.248870 ACTTTTTAACACAGTGCAGAAGG 57.751 39.130 0.00 0.00 0.00 3.46
3083 3362 3.708563 TTTTAACACAGTGCAGAAGGC 57.291 42.857 0.00 0.00 45.13 4.35
3094 3373 1.871080 GCAGAAGGCGCATATACACT 58.129 50.000 10.83 0.00 0.00 3.55
3095 3374 1.795286 GCAGAAGGCGCATATACACTC 59.205 52.381 10.83 0.00 0.00 3.51
3096 3375 2.803133 GCAGAAGGCGCATATACACTCA 60.803 50.000 10.83 0.00 0.00 3.41
3097 3376 3.457234 CAGAAGGCGCATATACACTCAA 58.543 45.455 10.83 0.00 0.00 3.02
3098 3377 3.246226 CAGAAGGCGCATATACACTCAAC 59.754 47.826 10.83 0.00 0.00 3.18
3099 3378 1.852942 AGGCGCATATACACTCAACG 58.147 50.000 10.83 0.00 0.00 4.10
3100 3379 1.407618 AGGCGCATATACACTCAACGA 59.592 47.619 10.83 0.00 0.00 3.85
3101 3380 2.159156 AGGCGCATATACACTCAACGAA 60.159 45.455 10.83 0.00 0.00 3.85
3102 3381 2.034001 GGCGCATATACACTCAACGAAC 60.034 50.000 10.83 0.00 0.00 3.95
3103 3382 2.601314 GCGCATATACACTCAACGAACA 59.399 45.455 0.30 0.00 0.00 3.18
3104 3383 3.541516 GCGCATATACACTCAACGAACAC 60.542 47.826 0.30 0.00 0.00 3.32
3105 3384 3.610677 CGCATATACACTCAACGAACACA 59.389 43.478 0.00 0.00 0.00 3.72
3106 3385 4.267690 CGCATATACACTCAACGAACACAT 59.732 41.667 0.00 0.00 0.00 3.21
3107 3386 5.457473 CGCATATACACTCAACGAACACATA 59.543 40.000 0.00 0.00 0.00 2.29
3108 3387 6.559703 CGCATATACACTCAACGAACACATAC 60.560 42.308 0.00 0.00 0.00 2.39
3109 3388 6.292168 GCATATACACTCAACGAACACATACC 60.292 42.308 0.00 0.00 0.00 2.73
3110 3389 2.762745 ACACTCAACGAACACATACCC 58.237 47.619 0.00 0.00 0.00 3.69
3111 3390 2.367567 ACACTCAACGAACACATACCCT 59.632 45.455 0.00 0.00 0.00 4.34
3112 3391 3.575256 ACACTCAACGAACACATACCCTA 59.425 43.478 0.00 0.00 0.00 3.53
3113 3392 3.924686 CACTCAACGAACACATACCCTAC 59.075 47.826 0.00 0.00 0.00 3.18
3114 3393 3.056322 ACTCAACGAACACATACCCTACC 60.056 47.826 0.00 0.00 0.00 3.18
3115 3394 2.898612 TCAACGAACACATACCCTACCA 59.101 45.455 0.00 0.00 0.00 3.25
3116 3395 2.997986 CAACGAACACATACCCTACCAC 59.002 50.000 0.00 0.00 0.00 4.16
3117 3396 2.250031 ACGAACACATACCCTACCACA 58.750 47.619 0.00 0.00 0.00 4.17
3118 3397 2.835764 ACGAACACATACCCTACCACAT 59.164 45.455 0.00 0.00 0.00 3.21
3119 3398 3.262405 ACGAACACATACCCTACCACATT 59.738 43.478 0.00 0.00 0.00 2.71
3120 3399 4.467082 ACGAACACATACCCTACCACATTA 59.533 41.667 0.00 0.00 0.00 1.90
3121 3400 5.047847 CGAACACATACCCTACCACATTAG 58.952 45.833 0.00 0.00 0.00 1.73
3122 3401 4.417426 ACACATACCCTACCACATTAGC 57.583 45.455 0.00 0.00 0.00 3.09
3123 3402 3.135895 ACACATACCCTACCACATTAGCC 59.864 47.826 0.00 0.00 0.00 3.93
3124 3403 3.135712 CACATACCCTACCACATTAGCCA 59.864 47.826 0.00 0.00 0.00 4.75
3125 3404 3.135895 ACATACCCTACCACATTAGCCAC 59.864 47.826 0.00 0.00 0.00 5.01
3126 3405 0.916809 ACCCTACCACATTAGCCACC 59.083 55.000 0.00 0.00 0.00 4.61
3127 3406 1.213296 CCCTACCACATTAGCCACCT 58.787 55.000 0.00 0.00 0.00 4.00
3128 3407 2.293318 ACCCTACCACATTAGCCACCTA 60.293 50.000 0.00 0.00 0.00 3.08
3129 3408 2.979678 CCCTACCACATTAGCCACCTAT 59.020 50.000 0.00 0.00 0.00 2.57
3130 3409 3.008049 CCCTACCACATTAGCCACCTATC 59.992 52.174 0.00 0.00 0.00 2.08
3131 3410 3.646162 CCTACCACATTAGCCACCTATCA 59.354 47.826 0.00 0.00 0.00 2.15
3132 3411 4.102524 CCTACCACATTAGCCACCTATCAA 59.897 45.833 0.00 0.00 0.00 2.57
3133 3412 4.584638 ACCACATTAGCCACCTATCAAA 57.415 40.909 0.00 0.00 0.00 2.69
3134 3413 4.270008 ACCACATTAGCCACCTATCAAAC 58.730 43.478 0.00 0.00 0.00 2.93
3135 3414 3.312421 CCACATTAGCCACCTATCAAACG 59.688 47.826 0.00 0.00 0.00 3.60
3136 3415 2.943033 ACATTAGCCACCTATCAAACGC 59.057 45.455 0.00 0.00 0.00 4.84
3137 3416 1.647346 TTAGCCACCTATCAAACGCG 58.353 50.000 3.53 3.53 0.00 6.01
3138 3417 0.808453 TAGCCACCTATCAAACGCGC 60.808 55.000 5.73 0.00 0.00 6.86
3139 3418 2.395360 GCCACCTATCAAACGCGCA 61.395 57.895 5.73 0.00 0.00 6.09
3140 3419 1.423845 CCACCTATCAAACGCGCAC 59.576 57.895 5.73 0.00 0.00 5.34
3141 3420 1.295357 CCACCTATCAAACGCGCACA 61.295 55.000 5.73 0.00 0.00 4.57
3142 3421 0.726827 CACCTATCAAACGCGCACAT 59.273 50.000 5.73 0.00 0.00 3.21
3143 3422 1.930503 CACCTATCAAACGCGCACATA 59.069 47.619 5.73 0.00 0.00 2.29
3144 3423 2.033747 CACCTATCAAACGCGCACATAG 60.034 50.000 5.73 6.99 0.00 2.23
3145 3424 2.159156 ACCTATCAAACGCGCACATAGA 60.159 45.455 5.73 0.00 0.00 1.98
3146 3425 2.218759 CCTATCAAACGCGCACATAGAC 59.781 50.000 5.73 0.00 0.00 2.59
3147 3426 1.006832 ATCAAACGCGCACATAGACC 58.993 50.000 5.73 0.00 0.00 3.85
3148 3427 1.017177 TCAAACGCGCACATAGACCC 61.017 55.000 5.73 0.00 0.00 4.46
3149 3428 1.019278 CAAACGCGCACATAGACCCT 61.019 55.000 5.73 0.00 0.00 4.34
3150 3429 0.533491 AAACGCGCACATAGACCCTA 59.467 50.000 5.73 0.00 0.00 3.53
3151 3430 0.179119 AACGCGCACATAGACCCTAC 60.179 55.000 5.73 0.00 0.00 3.18
3152 3431 1.299926 CGCGCACATAGACCCTACC 60.300 63.158 8.75 0.00 0.00 3.18
3153 3432 1.299926 GCGCACATAGACCCTACCG 60.300 63.158 0.30 0.00 0.00 4.02
3154 3433 1.299926 CGCACATAGACCCTACCGC 60.300 63.158 0.00 0.00 0.00 5.68
3155 3434 1.820581 GCACATAGACCCTACCGCA 59.179 57.895 0.00 0.00 0.00 5.69
3156 3435 0.393077 GCACATAGACCCTACCGCAT 59.607 55.000 0.00 0.00 0.00 4.73
3157 3436 1.202651 GCACATAGACCCTACCGCATT 60.203 52.381 0.00 0.00 0.00 3.56
3158 3437 2.483876 CACATAGACCCTACCGCATTG 58.516 52.381 0.00 0.00 0.00 2.82
3159 3438 2.102420 CACATAGACCCTACCGCATTGA 59.898 50.000 0.00 0.00 0.00 2.57
3160 3439 2.365617 ACATAGACCCTACCGCATTGAG 59.634 50.000 0.00 0.00 0.00 3.02
3161 3440 0.750850 TAGACCCTACCGCATTGAGC 59.249 55.000 0.00 0.00 40.87 4.26
3162 3441 1.220749 GACCCTACCGCATTGAGCA 59.779 57.895 0.00 0.00 46.13 4.26
3163 3442 0.179045 GACCCTACCGCATTGAGCAT 60.179 55.000 0.00 0.00 46.13 3.79
3164 3443 1.070134 GACCCTACCGCATTGAGCATA 59.930 52.381 0.00 0.00 46.13 3.14
3165 3444 1.699634 ACCCTACCGCATTGAGCATAT 59.300 47.619 0.00 0.00 46.13 1.78
3166 3445 2.289694 ACCCTACCGCATTGAGCATATC 60.290 50.000 0.00 0.00 46.13 1.63
3167 3446 2.027745 CCCTACCGCATTGAGCATATCT 60.028 50.000 0.00 0.00 46.13 1.98
3168 3447 2.998670 CCTACCGCATTGAGCATATCTG 59.001 50.000 0.00 0.00 46.13 2.90
3169 3448 2.916702 ACCGCATTGAGCATATCTGA 57.083 45.000 0.00 0.00 46.13 3.27
3170 3449 3.198409 ACCGCATTGAGCATATCTGAA 57.802 42.857 0.00 0.00 46.13 3.02
3171 3450 3.544684 ACCGCATTGAGCATATCTGAAA 58.455 40.909 0.00 0.00 46.13 2.69
3172 3451 3.947196 ACCGCATTGAGCATATCTGAAAA 59.053 39.130 0.00 0.00 46.13 2.29
3173 3452 4.398988 ACCGCATTGAGCATATCTGAAAAA 59.601 37.500 0.00 0.00 46.13 1.94
3174 3453 4.736793 CCGCATTGAGCATATCTGAAAAAC 59.263 41.667 0.00 0.00 46.13 2.43
3175 3454 5.449588 CCGCATTGAGCATATCTGAAAAACT 60.450 40.000 0.00 0.00 46.13 2.66
3176 3455 6.238456 CCGCATTGAGCATATCTGAAAAACTA 60.238 38.462 0.00 0.00 46.13 2.24
3177 3456 7.188834 CGCATTGAGCATATCTGAAAAACTAA 58.811 34.615 0.00 0.00 46.13 2.24
3178 3457 7.375280 CGCATTGAGCATATCTGAAAAACTAAG 59.625 37.037 0.00 0.00 46.13 2.18
3179 3458 7.167136 GCATTGAGCATATCTGAAAAACTAAGC 59.833 37.037 0.00 0.00 44.79 3.09
3180 3459 6.683974 TGAGCATATCTGAAAAACTAAGCC 57.316 37.500 0.00 0.00 0.00 4.35
3181 3460 5.294306 TGAGCATATCTGAAAAACTAAGCCG 59.706 40.000 0.00 0.00 0.00 5.52
3182 3461 4.576463 AGCATATCTGAAAAACTAAGCCGG 59.424 41.667 0.00 0.00 0.00 6.13
3183 3462 4.574828 GCATATCTGAAAAACTAAGCCGGA 59.425 41.667 5.05 0.00 0.00 5.14
3184 3463 5.065988 GCATATCTGAAAAACTAAGCCGGAA 59.934 40.000 5.05 0.00 0.00 4.30
3185 3464 6.238759 GCATATCTGAAAAACTAAGCCGGAAT 60.239 38.462 5.05 0.00 0.00 3.01
3186 3465 7.041372 GCATATCTGAAAAACTAAGCCGGAATA 60.041 37.037 5.05 0.00 0.00 1.75
3187 3466 9.003658 CATATCTGAAAAACTAAGCCGGAATAT 57.996 33.333 5.05 0.00 0.00 1.28
3188 3467 6.920569 TCTGAAAAACTAAGCCGGAATATC 57.079 37.500 5.05 0.00 0.00 1.63
3189 3468 6.411376 TCTGAAAAACTAAGCCGGAATATCA 58.589 36.000 5.05 0.00 0.00 2.15
3190 3469 7.054124 TCTGAAAAACTAAGCCGGAATATCAT 58.946 34.615 5.05 0.00 0.00 2.45
3191 3470 7.226720 TCTGAAAAACTAAGCCGGAATATCATC 59.773 37.037 5.05 0.00 0.00 2.92
3192 3471 7.054124 TGAAAAACTAAGCCGGAATATCATCT 58.946 34.615 5.05 0.00 0.00 2.90
3193 3472 7.556275 TGAAAAACTAAGCCGGAATATCATCTT 59.444 33.333 5.05 0.00 0.00 2.40
3194 3473 7.497925 AAAACTAAGCCGGAATATCATCTTC 57.502 36.000 5.05 0.00 0.00 2.87
3195 3474 5.808366 ACTAAGCCGGAATATCATCTTCA 57.192 39.130 5.05 0.00 0.00 3.02
3196 3475 5.788450 ACTAAGCCGGAATATCATCTTCAG 58.212 41.667 5.05 0.00 0.00 3.02
3197 3476 4.963318 AAGCCGGAATATCATCTTCAGA 57.037 40.909 5.05 0.00 0.00 3.27
3198 3477 5.495926 AAGCCGGAATATCATCTTCAGAT 57.504 39.130 5.05 0.00 34.56 2.90
3199 3478 5.495926 AGCCGGAATATCATCTTCAGATT 57.504 39.130 5.05 0.00 31.21 2.40
3200 3479 5.874093 AGCCGGAATATCATCTTCAGATTT 58.126 37.500 5.05 0.00 31.21 2.17
3201 3480 6.302269 AGCCGGAATATCATCTTCAGATTTT 58.698 36.000 5.05 0.00 31.21 1.82
3202 3481 7.453393 AGCCGGAATATCATCTTCAGATTTTA 58.547 34.615 5.05 0.00 31.21 1.52
3203 3482 7.389053 AGCCGGAATATCATCTTCAGATTTTAC 59.611 37.037 5.05 0.00 31.21 2.01
3204 3483 7.361286 GCCGGAATATCATCTTCAGATTTTACC 60.361 40.741 5.05 0.00 31.21 2.85
3205 3484 7.661437 CCGGAATATCATCTTCAGATTTTACCA 59.339 37.037 0.00 0.00 31.21 3.25
3206 3485 9.056005 CGGAATATCATCTTCAGATTTTACCAA 57.944 33.333 0.00 0.00 31.21 3.67
3208 3487 9.890352 GAATATCATCTTCAGATTTTACCAAGC 57.110 33.333 0.00 0.00 31.21 4.01
3209 3488 6.705863 ATCATCTTCAGATTTTACCAAGCC 57.294 37.500 0.00 0.00 31.21 4.35
3210 3489 4.635765 TCATCTTCAGATTTTACCAAGCCG 59.364 41.667 0.00 0.00 31.21 5.52
3211 3490 3.343617 TCTTCAGATTTTACCAAGCCGG 58.656 45.455 0.00 0.00 42.50 6.13
3212 3491 1.459450 TCAGATTTTACCAAGCCGGC 58.541 50.000 21.89 21.89 39.03 6.13
3213 3492 1.173043 CAGATTTTACCAAGCCGGCA 58.827 50.000 31.54 3.61 39.03 5.69
3214 3493 1.750778 CAGATTTTACCAAGCCGGCAT 59.249 47.619 31.54 15.82 39.03 4.40
3215 3494 2.948979 CAGATTTTACCAAGCCGGCATA 59.051 45.455 31.54 12.49 39.03 3.14
3216 3495 3.380004 CAGATTTTACCAAGCCGGCATAA 59.620 43.478 31.54 17.83 39.03 1.90
3217 3496 3.380320 AGATTTTACCAAGCCGGCATAAC 59.620 43.478 31.54 9.49 39.03 1.89
3218 3497 1.088306 TTTACCAAGCCGGCATAACG 58.912 50.000 31.54 13.27 39.03 3.18
3219 3498 0.036199 TTACCAAGCCGGCATAACGT 60.036 50.000 31.54 18.47 39.03 3.99
3220 3499 0.460635 TACCAAGCCGGCATAACGTC 60.461 55.000 31.54 0.00 39.03 4.34
3221 3500 1.449601 CCAAGCCGGCATAACGTCT 60.450 57.895 31.54 0.76 0.00 4.18
3222 3501 0.179094 CCAAGCCGGCATAACGTCTA 60.179 55.000 31.54 0.00 0.00 2.59
3223 3502 0.928229 CAAGCCGGCATAACGTCTAC 59.072 55.000 31.54 0.00 0.00 2.59
3224 3503 0.822164 AAGCCGGCATAACGTCTACT 59.178 50.000 31.54 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 4.990426 GCATCCCAATAATATGTTTGTGGC 59.010 41.667 0.00 0.00 0.00 5.01
42 43 6.294675 CGTCCATGCATCCCAATAATATGTTT 60.295 38.462 0.00 0.00 0.00 2.83
170 173 6.910972 TGTTCACGCGTTTCAAAAATATGTTA 59.089 30.769 10.22 0.00 0.00 2.41
287 313 7.096394 CGTTAAAAATGTTAATGCGGTGTTTCT 60.096 33.333 0.00 0.00 0.00 2.52
288 314 6.999055 CGTTAAAAATGTTAATGCGGTGTTTC 59.001 34.615 0.00 0.00 0.00 2.78
393 421 1.650912 CATAAGCGCCCACATCAGC 59.349 57.895 2.29 0.00 0.00 4.26
394 422 1.168407 CCCATAAGCGCCCACATCAG 61.168 60.000 2.29 0.00 0.00 2.90
414 445 2.546584 GCTGCTATTTAAATGGGCCAGC 60.547 50.000 20.21 20.21 0.00 4.85
513 547 1.301558 CATGGCATCTCGAGGGCTC 60.302 63.158 23.03 15.96 38.54 4.70
633 667 4.807039 GTGGTACGTGGCGGCGAT 62.807 66.667 12.98 0.00 35.59 4.58
745 787 3.247006 TCGTGGAGAAGATAACTTGCC 57.753 47.619 0.00 0.00 36.39 4.52
823 865 2.276740 CCCCTTGGTGGCCATCTC 59.723 66.667 18.94 7.16 31.53 2.75
960 1002 3.583276 ATCCGTCTTGTTCGCGCCA 62.583 57.895 0.00 0.00 0.00 5.69
971 1013 4.552365 CGCCATGCCCATCCGTCT 62.552 66.667 0.00 0.00 0.00 4.18
1108 1150 2.988839 GCTCACAGGGCTTGGGGAT 61.989 63.158 0.00 0.00 0.00 3.85
1171 1213 6.582636 TCAGCCCAGTTATTACTAACATCAG 58.417 40.000 5.85 0.00 39.81 2.90
1172 1214 6.553953 TCAGCCCAGTTATTACTAACATCA 57.446 37.500 5.85 0.00 39.81 3.07
1173 1215 5.467063 GCTCAGCCCAGTTATTACTAACATC 59.533 44.000 5.85 0.00 39.81 3.06
1174 1216 5.104527 TGCTCAGCCCAGTTATTACTAACAT 60.105 40.000 0.00 0.00 39.81 2.71
1175 1217 4.224147 TGCTCAGCCCAGTTATTACTAACA 59.776 41.667 0.00 0.00 39.81 2.41
1176 1218 4.766375 TGCTCAGCCCAGTTATTACTAAC 58.234 43.478 0.00 0.00 37.99 2.34
1177 1219 4.714802 TCTGCTCAGCCCAGTTATTACTAA 59.285 41.667 0.00 0.00 31.96 2.24
1179 1221 3.107601 TCTGCTCAGCCCAGTTATTACT 58.892 45.455 0.00 0.00 34.00 2.24
1180 1222 3.118592 AGTCTGCTCAGCCCAGTTATTAC 60.119 47.826 0.00 0.00 0.00 1.89
1384 1426 5.287035 GCCGAACTGAAATCACAAATCAATC 59.713 40.000 0.00 0.00 0.00 2.67
1385 1427 5.163513 GCCGAACTGAAATCACAAATCAAT 58.836 37.500 0.00 0.00 0.00 2.57
1412 1454 1.274167 AGACGTTAAATGTCCTCCGCA 59.726 47.619 0.00 0.00 34.73 5.69
1415 1457 4.203654 AGGAAGACGTTAAATGTCCTCC 57.796 45.455 14.67 14.67 42.44 4.30
1418 1460 6.500910 ACAAAAAGGAAGACGTTAAATGTCC 58.499 36.000 0.00 0.00 34.73 4.02
1451 1495 2.755650 GGCACCCTACATCAATCGTAG 58.244 52.381 0.00 0.00 36.83 3.51
1452 1496 1.067974 CGGCACCCTACATCAATCGTA 59.932 52.381 0.00 0.00 0.00 3.43
1453 1497 0.179084 CGGCACCCTACATCAATCGT 60.179 55.000 0.00 0.00 0.00 3.73
1454 1498 0.179084 ACGGCACCCTACATCAATCG 60.179 55.000 0.00 0.00 0.00 3.34
1609 1763 3.687212 CCACAAACCGCAGTCAATACATA 59.313 43.478 0.00 0.00 0.00 2.29
1610 1764 2.487762 CCACAAACCGCAGTCAATACAT 59.512 45.455 0.00 0.00 0.00 2.29
1624 1778 3.216292 ACAGCCACGGCCACAAAC 61.216 61.111 2.24 0.00 43.17 2.93
1732 1886 2.100418 GACTACAACATACCGACCCTCC 59.900 54.545 0.00 0.00 0.00 4.30
1738 1892 6.872628 ATTAGATCGACTACAACATACCGA 57.127 37.500 0.00 0.00 0.00 4.69
1753 1910 6.111768 ACTTGCTTGCTGTAAATTAGATCG 57.888 37.500 0.00 0.00 0.00 3.69
1755 1912 8.237267 GTGTAACTTGCTTGCTGTAAATTAGAT 58.763 33.333 0.00 0.00 0.00 1.98
1756 1913 7.227711 TGTGTAACTTGCTTGCTGTAAATTAGA 59.772 33.333 0.00 0.00 38.04 2.10
1757 1914 7.359595 TGTGTAACTTGCTTGCTGTAAATTAG 58.640 34.615 0.00 0.00 38.04 1.73
1759 1916 6.142818 TGTGTAACTTGCTTGCTGTAAATT 57.857 33.333 0.00 0.00 38.04 1.82
1761 1918 5.518812 CATGTGTAACTTGCTTGCTGTAAA 58.481 37.500 0.00 0.00 35.12 2.01
1763 1920 4.747540 CATGTGTAACTTGCTTGCTGTA 57.252 40.909 0.00 0.00 35.12 2.74
1764 1921 3.631145 CATGTGTAACTTGCTTGCTGT 57.369 42.857 0.00 0.00 35.12 4.40
1772 1929 4.024893 AGTTTCTCACGCATGTGTAACTTG 60.025 41.667 12.39 0.00 46.49 3.16
1773 1930 4.127171 AGTTTCTCACGCATGTGTAACTT 58.873 39.130 12.39 1.15 46.49 2.66
1775 1932 4.025229 TGAAGTTTCTCACGCATGTGTAAC 60.025 41.667 12.39 12.59 46.49 2.50
1777 1934 3.723260 TGAAGTTTCTCACGCATGTGTA 58.277 40.909 12.39 0.00 46.49 2.90
1780 1937 2.802816 GTCTGAAGTTTCTCACGCATGT 59.197 45.455 0.00 0.00 0.00 3.21
1781 1938 2.802247 TGTCTGAAGTTTCTCACGCATG 59.198 45.455 0.00 0.00 0.00 4.06
1782 1939 3.111853 TGTCTGAAGTTTCTCACGCAT 57.888 42.857 0.00 0.00 0.00 4.73
1783 1940 2.595124 TGTCTGAAGTTTCTCACGCA 57.405 45.000 0.00 0.00 0.00 5.24
1784 1941 2.802816 ACATGTCTGAAGTTTCTCACGC 59.197 45.455 0.00 0.00 0.00 5.34
1785 1942 3.804325 ACACATGTCTGAAGTTTCTCACG 59.196 43.478 0.00 0.00 0.00 4.35
1787 1944 4.571984 CACACACATGTCTGAAGTTTCTCA 59.428 41.667 8.21 0.00 36.72 3.27
1789 1946 4.517285 ACACACACATGTCTGAAGTTTCT 58.483 39.130 8.21 0.00 36.72 2.52
1790 1947 4.882671 ACACACACATGTCTGAAGTTTC 57.117 40.909 8.21 0.00 36.72 2.78
1791 1948 4.458989 ACAACACACACATGTCTGAAGTTT 59.541 37.500 8.21 2.18 36.72 2.66
1794 1951 3.789791 GCACAACACACACATGTCTGAAG 60.790 47.826 8.21 2.87 36.72 3.02
1795 1952 2.097304 GCACAACACACACATGTCTGAA 59.903 45.455 8.21 0.00 36.72 3.02
1797 1954 1.401199 TGCACAACACACACATGTCTG 59.599 47.619 0.00 0.00 36.72 3.51
1799 1956 1.268692 CCTGCACAACACACACATGTC 60.269 52.381 0.00 0.00 36.72 3.06
1801 1958 0.740149 ACCTGCACAACACACACATG 59.260 50.000 0.00 0.00 0.00 3.21
1802 1959 1.405105 GAACCTGCACAACACACACAT 59.595 47.619 0.00 0.00 0.00 3.21
1834 1994 3.993081 ACTTGCTGAAGATGTTCTCGAAG 59.007 43.478 4.03 5.58 33.38 3.79
1933 2093 0.242825 TCAGTTACCAGCCGACGAAG 59.757 55.000 0.00 0.00 0.00 3.79
1937 2097 4.850347 ATATAGTCAGTTACCAGCCGAC 57.150 45.455 0.00 0.00 0.00 4.79
1973 2137 6.263842 ACTGAAACTGAAGCTTCATTCATGAA 59.736 34.615 31.18 17.31 43.94 2.57
1974 2138 5.766670 ACTGAAACTGAAGCTTCATTCATGA 59.233 36.000 31.18 17.56 38.47 3.07
1985 2149 2.404215 TGTAGCGACTGAAACTGAAGC 58.596 47.619 0.00 0.00 0.00 3.86
2042 2206 0.333993 CCATCCATCCCATCCCATCC 59.666 60.000 0.00 0.00 0.00 3.51
2043 2207 1.375610 TCCATCCATCCCATCCCATC 58.624 55.000 0.00 0.00 0.00 3.51
2044 2208 1.644337 CATCCATCCATCCCATCCCAT 59.356 52.381 0.00 0.00 0.00 4.00
2045 2209 1.078115 CATCCATCCATCCCATCCCA 58.922 55.000 0.00 0.00 0.00 4.37
2046 2210 0.333993 CCATCCATCCATCCCATCCC 59.666 60.000 0.00 0.00 0.00 3.85
2047 2211 1.375610 TCCATCCATCCATCCCATCC 58.624 55.000 0.00 0.00 0.00 3.51
2066 2230 1.349026 CTTCATCGCCACCCTGGATAT 59.651 52.381 0.00 0.00 40.96 1.63
2067 2231 0.758734 CTTCATCGCCACCCTGGATA 59.241 55.000 0.00 0.00 40.96 2.59
2070 2234 2.825836 GCTTCATCGCCACCCTGG 60.826 66.667 0.00 0.00 41.55 4.45
2102 2266 2.048597 CCGAGCCAGCACGTACAA 60.049 61.111 8.58 0.00 0.00 2.41
2158 2322 1.589196 GAGGCTGCCGTCGTACATC 60.589 63.158 13.96 0.00 0.00 3.06
2243 2407 3.147595 CCCTGCGAGATCCACCGA 61.148 66.667 4.26 0.00 0.00 4.69
2297 2461 2.422597 GCCTGCTGTACATACACACAA 58.577 47.619 0.00 0.00 31.93 3.33
2362 2550 4.095483 GGCTGAACATTCAAGAGTACATGG 59.905 45.833 0.00 0.00 36.64 3.66
2368 2556 1.611673 CGGGGCTGAACATTCAAGAGT 60.612 52.381 0.00 0.00 36.64 3.24
2369 2557 1.089920 CGGGGCTGAACATTCAAGAG 58.910 55.000 0.00 0.00 36.64 2.85
2370 2558 0.400213 ACGGGGCTGAACATTCAAGA 59.600 50.000 0.00 0.00 36.64 3.02
2371 2559 1.737793 GTACGGGGCTGAACATTCAAG 59.262 52.381 0.00 0.00 36.64 3.02
2441 2638 2.548480 TGTATCTATCTGCAGTCGACCG 59.452 50.000 14.67 2.36 0.00 4.79
2442 2639 3.815962 TCTGTATCTATCTGCAGTCGACC 59.184 47.826 14.67 0.00 0.00 4.79
2443 2640 5.621197 ATCTGTATCTATCTGCAGTCGAC 57.379 43.478 14.67 7.70 0.00 4.20
2444 2641 7.066404 GGAATATCTGTATCTATCTGCAGTCGA 59.934 40.741 14.67 9.06 0.00 4.20
2445 2642 7.192913 GGAATATCTGTATCTATCTGCAGTCG 58.807 42.308 14.67 3.49 0.00 4.18
2446 2643 7.341769 AGGGAATATCTGTATCTATCTGCAGTC 59.658 40.741 14.67 0.00 0.00 3.51
2447 2644 7.188381 AGGGAATATCTGTATCTATCTGCAGT 58.812 38.462 14.67 3.75 0.00 4.40
2448 2645 7.658525 AGGGAATATCTGTATCTATCTGCAG 57.341 40.000 7.63 7.63 0.00 4.41
2449 2646 7.898100 AGAAGGGAATATCTGTATCTATCTGCA 59.102 37.037 0.00 0.00 0.00 4.41
2450 2647 8.305046 AGAAGGGAATATCTGTATCTATCTGC 57.695 38.462 0.00 0.00 0.00 4.26
2452 2649 9.487442 GGAAGAAGGGAATATCTGTATCTATCT 57.513 37.037 0.00 0.00 0.00 1.98
2453 2650 8.700973 GGGAAGAAGGGAATATCTGTATCTATC 58.299 40.741 0.00 0.00 0.00 2.08
2454 2651 7.625682 GGGGAAGAAGGGAATATCTGTATCTAT 59.374 40.741 0.00 0.00 0.00 1.98
2455 2652 6.960542 GGGGAAGAAGGGAATATCTGTATCTA 59.039 42.308 0.00 0.00 0.00 1.98
2456 2653 5.788014 GGGGAAGAAGGGAATATCTGTATCT 59.212 44.000 0.00 0.00 0.00 1.98
2457 2654 5.045505 GGGGGAAGAAGGGAATATCTGTATC 60.046 48.000 0.00 0.00 0.00 2.24
2458 2655 4.852697 GGGGGAAGAAGGGAATATCTGTAT 59.147 45.833 0.00 0.00 0.00 2.29
2459 2656 4.240323 GGGGGAAGAAGGGAATATCTGTA 58.760 47.826 0.00 0.00 0.00 2.74
2460 2657 3.056832 GGGGGAAGAAGGGAATATCTGT 58.943 50.000 0.00 0.00 0.00 3.41
2461 2658 2.039084 CGGGGGAAGAAGGGAATATCTG 59.961 54.545 0.00 0.00 0.00 2.90
2462 2659 2.339769 CGGGGGAAGAAGGGAATATCT 58.660 52.381 0.00 0.00 0.00 1.98
2463 2660 1.351350 CCGGGGGAAGAAGGGAATATC 59.649 57.143 0.00 0.00 0.00 1.63
2464 2661 1.446016 CCGGGGGAAGAAGGGAATAT 58.554 55.000 0.00 0.00 0.00 1.28
2465 2662 0.696485 CCCGGGGGAAGAAGGGAATA 60.696 60.000 14.71 0.00 46.64 1.75
2466 2663 2.006991 CCCGGGGGAAGAAGGGAAT 61.007 63.158 14.71 0.00 46.64 3.01
2467 2664 2.612746 CCCGGGGGAAGAAGGGAA 60.613 66.667 14.71 0.00 46.64 3.97
2482 2679 3.976902 AATCGACGACGTTCCGCCC 62.977 63.158 0.13 0.00 40.69 6.13
2483 2680 2.505557 AATCGACGACGTTCCGCC 60.506 61.111 0.13 0.00 40.69 6.13
2484 2681 2.687436 CAATCGACGACGTTCCGC 59.313 61.111 0.13 0.00 40.69 5.54
2485 2682 1.998550 CTGCAATCGACGACGTTCCG 61.999 60.000 0.13 1.79 40.69 4.30
2486 2683 0.731514 TCTGCAATCGACGACGTTCC 60.732 55.000 0.13 0.00 40.69 3.62
2487 2684 1.269166 ATCTGCAATCGACGACGTTC 58.731 50.000 0.13 0.00 40.69 3.95
2488 2685 2.182825 GTATCTGCAATCGACGACGTT 58.817 47.619 0.13 0.00 40.69 3.99
2489 2686 1.823828 GTATCTGCAATCGACGACGT 58.176 50.000 0.00 0.00 40.69 4.34
2490 2687 0.764801 CGTATCTGCAATCGACGACG 59.235 55.000 0.00 0.00 41.26 5.12
2491 2688 0.498927 GCGTATCTGCAATCGACGAC 59.501 55.000 0.00 0.00 35.59 4.34
2492 2689 0.099791 TGCGTATCTGCAATCGACGA 59.900 50.000 12.61 0.00 43.02 4.20
2506 2703 2.231478 GCCAGCCTTATCTATCTGCGTA 59.769 50.000 0.00 0.00 0.00 4.42
2507 2704 1.001406 GCCAGCCTTATCTATCTGCGT 59.999 52.381 0.00 0.00 0.00 5.24
2508 2705 1.719600 GCCAGCCTTATCTATCTGCG 58.280 55.000 0.00 0.00 0.00 5.18
2616 2835 2.242043 CCATTGTGAAGGAAGCAGGTT 58.758 47.619 0.00 0.00 0.00 3.50
2618 2837 1.915141 ACCATTGTGAAGGAAGCAGG 58.085 50.000 0.00 0.00 0.00 4.85
2620 2839 2.158475 AGGAACCATTGTGAAGGAAGCA 60.158 45.455 0.00 0.00 0.00 3.91
2623 2844 2.552155 CGGAGGAACCATTGTGAAGGAA 60.552 50.000 0.00 0.00 38.90 3.36
2660 2937 3.417101 TGCTACGTTGGGATGAAAATGT 58.583 40.909 0.00 0.00 0.00 2.71
2662 2939 6.183360 CCTTATTGCTACGTTGGGATGAAAAT 60.183 38.462 0.00 0.00 0.00 1.82
2663 2940 5.124776 CCTTATTGCTACGTTGGGATGAAAA 59.875 40.000 0.00 0.00 0.00 2.29
2667 2944 2.290641 GCCTTATTGCTACGTTGGGATG 59.709 50.000 0.00 0.00 0.00 3.51
2668 2945 2.572290 GCCTTATTGCTACGTTGGGAT 58.428 47.619 0.00 0.00 0.00 3.85
2669 2946 1.407712 GGCCTTATTGCTACGTTGGGA 60.408 52.381 0.00 0.00 0.00 4.37
2670 2947 1.021968 GGCCTTATTGCTACGTTGGG 58.978 55.000 0.00 0.00 0.00 4.12
2671 2948 2.038387 AGGCCTTATTGCTACGTTGG 57.962 50.000 0.00 0.00 0.00 3.77
2675 2952 4.822026 AGCTAATAGGCCTTATTGCTACG 58.178 43.478 12.58 0.00 35.87 3.51
2683 2961 2.634940 CCAGCTGAGCTAATAGGCCTTA 59.365 50.000 17.39 0.00 36.40 2.69
2771 3050 9.570488 GGAATAATTCTGAGGATGTACGTATAC 57.430 37.037 0.00 0.00 0.00 1.47
2772 3051 9.529823 AGGAATAATTCTGAGGATGTACGTATA 57.470 33.333 0.00 0.00 0.00 1.47
2773 3052 8.307483 CAGGAATAATTCTGAGGATGTACGTAT 58.693 37.037 0.00 0.00 33.11 3.06
2774 3053 7.255836 CCAGGAATAATTCTGAGGATGTACGTA 60.256 40.741 0.00 0.00 33.11 3.57
2775 3054 6.463049 CCAGGAATAATTCTGAGGATGTACGT 60.463 42.308 0.00 0.00 33.11 3.57
2776 3055 5.928839 CCAGGAATAATTCTGAGGATGTACG 59.071 44.000 0.00 0.00 33.11 3.67
2777 3056 5.703130 GCCAGGAATAATTCTGAGGATGTAC 59.297 44.000 0.00 0.00 33.11 2.90
2778 3057 5.511373 CGCCAGGAATAATTCTGAGGATGTA 60.511 44.000 0.00 0.00 33.11 2.29
2779 3058 4.723309 GCCAGGAATAATTCTGAGGATGT 58.277 43.478 0.00 0.00 33.11 3.06
2780 3059 3.750130 CGCCAGGAATAATTCTGAGGATG 59.250 47.826 0.00 0.00 33.11 3.51
2781 3060 3.648067 TCGCCAGGAATAATTCTGAGGAT 59.352 43.478 0.00 0.00 33.11 3.24
2795 3074 4.946772 TGAAATCATTTTATGTCGCCAGGA 59.053 37.500 0.00 0.00 0.00 3.86
2812 3091 7.728847 AAACCAAGCAAATAAGGTTGAAATC 57.271 32.000 7.38 0.00 46.85 2.17
2817 3096 8.432110 AACTAAAAACCAAGCAAATAAGGTTG 57.568 30.769 0.00 0.00 43.17 3.77
2821 3100 8.077386 TCGGTAACTAAAAACCAAGCAAATAAG 58.923 33.333 0.00 0.00 35.35 1.73
2830 3109 4.197750 TGCTGTCGGTAACTAAAAACCAA 58.802 39.130 0.00 0.00 35.35 3.67
2832 3111 4.379082 CCATGCTGTCGGTAACTAAAAACC 60.379 45.833 0.00 0.00 0.00 3.27
2833 3112 4.719040 CCATGCTGTCGGTAACTAAAAAC 58.281 43.478 0.00 0.00 0.00 2.43
2844 3123 0.176680 ACTAAGAGCCATGCTGTCGG 59.823 55.000 0.00 0.00 39.88 4.79
2845 3124 2.015736 AACTAAGAGCCATGCTGTCG 57.984 50.000 0.00 0.00 39.88 4.35
2846 3125 4.392921 TCTAACTAAGAGCCATGCTGTC 57.607 45.455 0.00 0.00 39.88 3.51
2867 3146 7.411804 GCGTGCTGCTTCATAATAATTTGTTTT 60.412 33.333 0.00 0.00 41.73 2.43
2881 3160 1.066757 TGAAAATTGCGTGCTGCTTCA 59.933 42.857 0.00 0.00 46.63 3.02
2920 3199 2.096466 TCGTGACAAATTTGTAGCAGCG 60.096 45.455 23.33 19.99 42.43 5.18
2925 3204 3.908382 GCTTGCTCGTGACAAATTTGTAG 59.092 43.478 23.33 17.25 42.43 2.74
2941 3220 7.013655 CAGTAATTAGGGTATGAATTGCTTGCT 59.986 37.037 0.00 0.00 36.30 3.91
2954 3233 9.127277 GCATTGGTATTTTCAGTAATTAGGGTA 57.873 33.333 0.00 0.00 0.00 3.69
2955 3234 7.201785 CGCATTGGTATTTTCAGTAATTAGGGT 60.202 37.037 0.00 0.00 0.00 4.34
2956 3235 7.138736 CGCATTGGTATTTTCAGTAATTAGGG 58.861 38.462 0.00 0.00 0.00 3.53
2957 3236 6.636850 GCGCATTGGTATTTTCAGTAATTAGG 59.363 38.462 0.30 0.00 0.00 2.69
2958 3237 6.356977 CGCGCATTGGTATTTTCAGTAATTAG 59.643 38.462 8.75 0.00 0.00 1.73
2959 3238 6.183360 ACGCGCATTGGTATTTTCAGTAATTA 60.183 34.615 5.73 0.00 0.00 1.40
2960 3239 5.034152 CGCGCATTGGTATTTTCAGTAATT 58.966 37.500 8.75 0.00 0.00 1.40
2961 3240 4.095782 ACGCGCATTGGTATTTTCAGTAAT 59.904 37.500 5.73 0.00 0.00 1.89
2962 3241 3.437395 ACGCGCATTGGTATTTTCAGTAA 59.563 39.130 5.73 0.00 0.00 2.24
2963 3242 3.004171 ACGCGCATTGGTATTTTCAGTA 58.996 40.909 5.73 0.00 0.00 2.74
2964 3243 1.810151 ACGCGCATTGGTATTTTCAGT 59.190 42.857 5.73 0.00 0.00 3.41
2965 3244 2.542766 ACGCGCATTGGTATTTTCAG 57.457 45.000 5.73 0.00 0.00 3.02
2966 3245 2.742589 TGTACGCGCATTGGTATTTTCA 59.257 40.909 5.73 0.00 0.00 2.69
2967 3246 3.392769 TGTACGCGCATTGGTATTTTC 57.607 42.857 5.73 0.00 0.00 2.29
2968 3247 3.833545 TTGTACGCGCATTGGTATTTT 57.166 38.095 5.73 0.00 0.00 1.82
2969 3248 3.833545 TTTGTACGCGCATTGGTATTT 57.166 38.095 5.73 0.00 0.00 1.40
2970 3249 3.058155 TGTTTTGTACGCGCATTGGTATT 60.058 39.130 5.73 0.00 0.00 1.89
2971 3250 2.484651 TGTTTTGTACGCGCATTGGTAT 59.515 40.909 5.73 0.00 0.00 2.73
2972 3251 1.871676 TGTTTTGTACGCGCATTGGTA 59.128 42.857 5.73 0.00 0.00 3.25
2973 3252 0.663688 TGTTTTGTACGCGCATTGGT 59.336 45.000 5.73 0.00 0.00 3.67
2974 3253 1.759994 TTGTTTTGTACGCGCATTGG 58.240 45.000 5.73 0.00 0.00 3.16
2975 3254 2.723658 ACATTGTTTTGTACGCGCATTG 59.276 40.909 5.73 3.53 0.00 2.82
2976 3255 3.006659 ACATTGTTTTGTACGCGCATT 57.993 38.095 5.73 0.00 0.00 3.56
2977 3256 2.697431 ACATTGTTTTGTACGCGCAT 57.303 40.000 5.73 0.00 0.00 4.73
2978 3257 2.112522 CAACATTGTTTTGTACGCGCA 58.887 42.857 5.73 0.00 0.00 6.09
2979 3258 1.137019 GCAACATTGTTTTGTACGCGC 60.137 47.619 5.73 0.00 0.00 6.86
2980 3259 2.150985 CAGCAACATTGTTTTGTACGCG 59.849 45.455 3.53 3.53 34.83 6.01
2981 3260 2.097444 GCAGCAACATTGTTTTGTACGC 60.097 45.455 0.00 0.00 0.00 4.42
2982 3261 3.180189 CAGCAGCAACATTGTTTTGTACG 59.820 43.478 0.00 0.00 0.00 3.67
2983 3262 3.060339 GCAGCAGCAACATTGTTTTGTAC 60.060 43.478 0.00 0.00 41.58 2.90
2984 3263 3.122297 GCAGCAGCAACATTGTTTTGTA 58.878 40.909 0.00 0.00 41.58 2.41
2985 3264 1.935199 GCAGCAGCAACATTGTTTTGT 59.065 42.857 0.00 0.00 41.58 2.83
2986 3265 1.262151 GGCAGCAGCAACATTGTTTTG 59.738 47.619 2.65 3.16 44.61 2.44
2987 3266 1.139455 AGGCAGCAGCAACATTGTTTT 59.861 42.857 2.65 0.00 44.61 2.43
2988 3267 0.754472 AGGCAGCAGCAACATTGTTT 59.246 45.000 2.65 0.00 44.61 2.83
2989 3268 0.316204 GAGGCAGCAGCAACATTGTT 59.684 50.000 2.65 0.00 44.61 2.83
2990 3269 1.530013 GGAGGCAGCAGCAACATTGT 61.530 55.000 2.65 0.00 44.61 2.71
2991 3270 1.214589 GGAGGCAGCAGCAACATTG 59.785 57.895 2.65 0.00 44.61 2.82
2992 3271 2.338015 CGGAGGCAGCAGCAACATT 61.338 57.895 2.65 0.00 44.61 2.71
2993 3272 2.749044 CGGAGGCAGCAGCAACAT 60.749 61.111 2.65 0.00 44.61 2.71
2994 3273 4.254709 ACGGAGGCAGCAGCAACA 62.255 61.111 2.65 0.00 44.61 3.33
2995 3274 3.426568 GACGGAGGCAGCAGCAAC 61.427 66.667 2.65 0.00 44.61 4.17
2996 3275 4.704833 GGACGGAGGCAGCAGCAA 62.705 66.667 2.65 0.00 44.61 3.91
2999 3278 1.888436 TTACAGGACGGAGGCAGCAG 61.888 60.000 0.00 0.00 0.00 4.24
3000 3279 1.264749 ATTACAGGACGGAGGCAGCA 61.265 55.000 0.00 0.00 0.00 4.41
3001 3280 0.811616 CATTACAGGACGGAGGCAGC 60.812 60.000 0.00 0.00 0.00 5.25
3002 3281 0.537188 ACATTACAGGACGGAGGCAG 59.463 55.000 0.00 0.00 0.00 4.85
3003 3282 1.855295 TACATTACAGGACGGAGGCA 58.145 50.000 0.00 0.00 0.00 4.75
3004 3283 2.167900 ACTTACATTACAGGACGGAGGC 59.832 50.000 0.00 0.00 0.00 4.70
3005 3284 4.467198 AACTTACATTACAGGACGGAGG 57.533 45.455 0.00 0.00 0.00 4.30
3006 3285 6.392354 TGTAAACTTACATTACAGGACGGAG 58.608 40.000 0.00 0.00 38.10 4.63
3007 3286 6.343716 TGTAAACTTACATTACAGGACGGA 57.656 37.500 0.00 0.00 38.10 4.69
3008 3287 6.401796 GCTTGTAAACTTACATTACAGGACGG 60.402 42.308 11.28 0.00 42.40 4.79
3009 3288 6.367969 AGCTTGTAAACTTACATTACAGGACG 59.632 38.462 11.28 0.00 42.40 4.79
3010 3289 7.668525 AGCTTGTAAACTTACATTACAGGAC 57.331 36.000 11.28 4.65 42.40 3.85
3022 3301 9.649167 ACGTCTTACATTATAGCTTGTAAACTT 57.351 29.630 9.40 3.76 37.73 2.66
3023 3302 9.649167 AACGTCTTACATTATAGCTTGTAAACT 57.351 29.630 9.40 0.00 37.73 2.66
3053 3332 6.451393 TGCACTGTGTTAAAAAGTTTCACTT 58.549 32.000 9.86 0.00 40.80 3.16
3054 3333 6.019779 TGCACTGTGTTAAAAAGTTTCACT 57.980 33.333 9.86 0.00 0.00 3.41
3055 3334 6.090129 TCTGCACTGTGTTAAAAAGTTTCAC 58.910 36.000 9.86 0.00 0.00 3.18
3056 3335 6.260870 TCTGCACTGTGTTAAAAAGTTTCA 57.739 33.333 9.86 0.00 0.00 2.69
3057 3336 6.253512 CCTTCTGCACTGTGTTAAAAAGTTTC 59.746 38.462 9.86 0.00 0.00 2.78
3058 3337 6.099341 CCTTCTGCACTGTGTTAAAAAGTTT 58.901 36.000 9.86 0.00 0.00 2.66
3059 3338 5.650543 CCTTCTGCACTGTGTTAAAAAGTT 58.349 37.500 9.86 0.00 0.00 2.66
3060 3339 4.440112 GCCTTCTGCACTGTGTTAAAAAGT 60.440 41.667 9.86 0.00 40.77 2.66
3061 3340 4.044426 GCCTTCTGCACTGTGTTAAAAAG 58.956 43.478 9.86 6.61 40.77 2.27
3062 3341 3.488384 CGCCTTCTGCACTGTGTTAAAAA 60.488 43.478 9.86 0.00 41.33 1.94
3063 3342 2.032799 CGCCTTCTGCACTGTGTTAAAA 59.967 45.455 9.86 0.00 41.33 1.52
3064 3343 1.601903 CGCCTTCTGCACTGTGTTAAA 59.398 47.619 9.86 0.79 41.33 1.52
3065 3344 1.225855 CGCCTTCTGCACTGTGTTAA 58.774 50.000 9.86 1.10 41.33 2.01
3066 3345 1.227999 GCGCCTTCTGCACTGTGTTA 61.228 55.000 9.86 0.00 41.33 2.41
3067 3346 2.546494 GCGCCTTCTGCACTGTGTT 61.546 57.895 9.86 0.00 41.33 3.32
3068 3347 2.974698 GCGCCTTCTGCACTGTGT 60.975 61.111 9.86 0.00 41.33 3.72
3069 3348 1.020861 TATGCGCCTTCTGCACTGTG 61.021 55.000 4.18 2.76 46.57 3.66
3070 3349 0.107508 ATATGCGCCTTCTGCACTGT 60.108 50.000 4.18 0.00 46.57 3.55
3071 3350 1.528586 GTATATGCGCCTTCTGCACTG 59.471 52.381 4.18 0.00 46.57 3.66
3072 3351 1.138859 TGTATATGCGCCTTCTGCACT 59.861 47.619 4.18 0.00 46.57 4.40
3073 3352 1.261619 GTGTATATGCGCCTTCTGCAC 59.738 52.381 4.18 3.34 46.57 4.57
3075 3354 1.795286 GAGTGTATATGCGCCTTCTGC 59.205 52.381 4.18 0.00 0.00 4.26
3076 3355 3.097877 TGAGTGTATATGCGCCTTCTG 57.902 47.619 4.18 0.00 0.00 3.02
3077 3356 3.458189 GTTGAGTGTATATGCGCCTTCT 58.542 45.455 4.18 0.00 0.00 2.85
3078 3357 2.218759 CGTTGAGTGTATATGCGCCTTC 59.781 50.000 4.18 0.00 0.00 3.46
3079 3358 2.159156 TCGTTGAGTGTATATGCGCCTT 60.159 45.455 4.18 0.00 0.00 4.35
3080 3359 1.407618 TCGTTGAGTGTATATGCGCCT 59.592 47.619 4.18 0.00 0.00 5.52
3081 3360 1.847818 TCGTTGAGTGTATATGCGCC 58.152 50.000 4.18 0.00 0.00 6.53
3082 3361 2.601314 TGTTCGTTGAGTGTATATGCGC 59.399 45.455 0.00 0.00 0.00 6.09
3083 3362 3.610677 TGTGTTCGTTGAGTGTATATGCG 59.389 43.478 0.00 0.00 0.00 4.73
3084 3363 5.718649 ATGTGTTCGTTGAGTGTATATGC 57.281 39.130 0.00 0.00 0.00 3.14
3085 3364 6.200286 GGGTATGTGTTCGTTGAGTGTATATG 59.800 42.308 0.00 0.00 0.00 1.78
3086 3365 6.097839 AGGGTATGTGTTCGTTGAGTGTATAT 59.902 38.462 0.00 0.00 0.00 0.86
3087 3366 5.419788 AGGGTATGTGTTCGTTGAGTGTATA 59.580 40.000 0.00 0.00 0.00 1.47
3088 3367 4.222145 AGGGTATGTGTTCGTTGAGTGTAT 59.778 41.667 0.00 0.00 0.00 2.29
3089 3368 3.575256 AGGGTATGTGTTCGTTGAGTGTA 59.425 43.478 0.00 0.00 0.00 2.90
3090 3369 2.367567 AGGGTATGTGTTCGTTGAGTGT 59.632 45.455 0.00 0.00 0.00 3.55
3091 3370 3.040147 AGGGTATGTGTTCGTTGAGTG 57.960 47.619 0.00 0.00 0.00 3.51
3092 3371 3.056322 GGTAGGGTATGTGTTCGTTGAGT 60.056 47.826 0.00 0.00 0.00 3.41
3093 3372 3.056393 TGGTAGGGTATGTGTTCGTTGAG 60.056 47.826 0.00 0.00 0.00 3.02
3094 3373 2.898612 TGGTAGGGTATGTGTTCGTTGA 59.101 45.455 0.00 0.00 0.00 3.18
3095 3374 2.997986 GTGGTAGGGTATGTGTTCGTTG 59.002 50.000 0.00 0.00 0.00 4.10
3096 3375 2.633967 TGTGGTAGGGTATGTGTTCGTT 59.366 45.455 0.00 0.00 0.00 3.85
3097 3376 2.250031 TGTGGTAGGGTATGTGTTCGT 58.750 47.619 0.00 0.00 0.00 3.85
3098 3377 3.536956 ATGTGGTAGGGTATGTGTTCG 57.463 47.619 0.00 0.00 0.00 3.95
3099 3378 4.814771 GCTAATGTGGTAGGGTATGTGTTC 59.185 45.833 0.00 0.00 0.00 3.18
3100 3379 4.384868 GGCTAATGTGGTAGGGTATGTGTT 60.385 45.833 0.00 0.00 0.00 3.32
3101 3380 3.135895 GGCTAATGTGGTAGGGTATGTGT 59.864 47.826 0.00 0.00 0.00 3.72
3102 3381 3.135712 TGGCTAATGTGGTAGGGTATGTG 59.864 47.826 0.00 0.00 0.00 3.21
3103 3382 3.135895 GTGGCTAATGTGGTAGGGTATGT 59.864 47.826 0.00 0.00 0.00 2.29
3104 3383 3.496160 GGTGGCTAATGTGGTAGGGTATG 60.496 52.174 0.00 0.00 0.00 2.39
3105 3384 2.709397 GGTGGCTAATGTGGTAGGGTAT 59.291 50.000 0.00 0.00 0.00 2.73
3106 3385 2.121129 GGTGGCTAATGTGGTAGGGTA 58.879 52.381 0.00 0.00 0.00 3.69
3107 3386 0.916809 GGTGGCTAATGTGGTAGGGT 59.083 55.000 0.00 0.00 0.00 4.34
3108 3387 1.213296 AGGTGGCTAATGTGGTAGGG 58.787 55.000 0.00 0.00 0.00 3.53
3109 3388 3.646162 TGATAGGTGGCTAATGTGGTAGG 59.354 47.826 0.00 0.00 0.00 3.18
3110 3389 4.955811 TGATAGGTGGCTAATGTGGTAG 57.044 45.455 0.00 0.00 0.00 3.18
3111 3390 5.433526 GTTTGATAGGTGGCTAATGTGGTA 58.566 41.667 0.00 0.00 0.00 3.25
3112 3391 4.270008 GTTTGATAGGTGGCTAATGTGGT 58.730 43.478 0.00 0.00 0.00 4.16
3113 3392 3.312421 CGTTTGATAGGTGGCTAATGTGG 59.688 47.826 0.00 0.00 0.00 4.17
3114 3393 3.242739 GCGTTTGATAGGTGGCTAATGTG 60.243 47.826 0.00 0.00 0.00 3.21
3115 3394 2.943033 GCGTTTGATAGGTGGCTAATGT 59.057 45.455 0.00 0.00 0.00 2.71
3116 3395 2.032894 CGCGTTTGATAGGTGGCTAATG 60.033 50.000 0.00 0.00 0.00 1.90
3117 3396 2.210116 CGCGTTTGATAGGTGGCTAAT 58.790 47.619 0.00 0.00 0.00 1.73
3118 3397 1.647346 CGCGTTTGATAGGTGGCTAA 58.353 50.000 0.00 0.00 0.00 3.09
3119 3398 0.808453 GCGCGTTTGATAGGTGGCTA 60.808 55.000 8.43 0.00 0.00 3.93
3120 3399 2.106683 GCGCGTTTGATAGGTGGCT 61.107 57.895 8.43 0.00 0.00 4.75
3121 3400 2.395360 TGCGCGTTTGATAGGTGGC 61.395 57.895 8.43 0.00 0.00 5.01
3122 3401 1.295357 TGTGCGCGTTTGATAGGTGG 61.295 55.000 8.43 0.00 0.00 4.61
3123 3402 0.726827 ATGTGCGCGTTTGATAGGTG 59.273 50.000 8.43 0.00 0.00 4.00
3124 3403 2.159156 TCTATGTGCGCGTTTGATAGGT 60.159 45.455 8.43 0.00 0.00 3.08
3125 3404 2.218759 GTCTATGTGCGCGTTTGATAGG 59.781 50.000 8.43 0.00 0.00 2.57
3126 3405 2.218759 GGTCTATGTGCGCGTTTGATAG 59.781 50.000 8.43 8.87 0.00 2.08
3127 3406 2.198406 GGTCTATGTGCGCGTTTGATA 58.802 47.619 8.43 0.00 0.00 2.15
3128 3407 1.006832 GGTCTATGTGCGCGTTTGAT 58.993 50.000 8.43 0.00 0.00 2.57
3129 3408 1.017177 GGGTCTATGTGCGCGTTTGA 61.017 55.000 8.43 0.00 0.00 2.69
3130 3409 1.019278 AGGGTCTATGTGCGCGTTTG 61.019 55.000 8.43 0.00 0.00 2.93
3131 3410 0.533491 TAGGGTCTATGTGCGCGTTT 59.467 50.000 8.43 0.00 0.00 3.60
3132 3411 0.179119 GTAGGGTCTATGTGCGCGTT 60.179 55.000 8.43 0.00 0.00 4.84
3133 3412 1.436336 GTAGGGTCTATGTGCGCGT 59.564 57.895 8.43 0.00 0.00 6.01
3134 3413 1.299926 GGTAGGGTCTATGTGCGCG 60.300 63.158 0.00 0.00 0.00 6.86
3135 3414 1.299926 CGGTAGGGTCTATGTGCGC 60.300 63.158 0.00 0.00 0.00 6.09
3136 3415 1.299926 GCGGTAGGGTCTATGTGCG 60.300 63.158 0.00 0.00 0.00 5.34
3137 3416 0.393077 ATGCGGTAGGGTCTATGTGC 59.607 55.000 0.00 0.00 0.00 4.57
3138 3417 2.102420 TCAATGCGGTAGGGTCTATGTG 59.898 50.000 0.00 0.00 0.00 3.21
3139 3418 2.365617 CTCAATGCGGTAGGGTCTATGT 59.634 50.000 0.00 0.00 0.00 2.29
3140 3419 2.868044 GCTCAATGCGGTAGGGTCTATG 60.868 54.545 0.00 0.00 0.00 2.23
3141 3420 1.344763 GCTCAATGCGGTAGGGTCTAT 59.655 52.381 0.00 0.00 0.00 1.98
3142 3421 0.750850 GCTCAATGCGGTAGGGTCTA 59.249 55.000 0.00 0.00 0.00 2.59
3143 3422 1.264749 TGCTCAATGCGGTAGGGTCT 61.265 55.000 0.00 0.00 46.63 3.85
3144 3423 0.179045 ATGCTCAATGCGGTAGGGTC 60.179 55.000 0.00 0.00 46.63 4.46
3145 3424 1.128200 TATGCTCAATGCGGTAGGGT 58.872 50.000 0.00 0.00 46.63 4.34
3146 3425 2.027745 AGATATGCTCAATGCGGTAGGG 60.028 50.000 0.00 0.00 46.63 3.53
3147 3426 2.998670 CAGATATGCTCAATGCGGTAGG 59.001 50.000 0.00 0.00 46.63 3.18
3148 3427 3.917988 TCAGATATGCTCAATGCGGTAG 58.082 45.455 0.00 0.00 46.63 3.18
3149 3428 4.335400 TTCAGATATGCTCAATGCGGTA 57.665 40.909 0.00 0.00 46.63 4.02
3150 3429 2.916702 TCAGATATGCTCAATGCGGT 57.083 45.000 0.00 0.00 46.63 5.68
3151 3430 4.556942 TTTTCAGATATGCTCAATGCGG 57.443 40.909 0.00 0.00 46.63 5.69
3152 3431 5.575957 AGTTTTTCAGATATGCTCAATGCG 58.424 37.500 0.00 0.00 46.63 4.73
3153 3432 7.167136 GCTTAGTTTTTCAGATATGCTCAATGC 59.833 37.037 0.00 0.00 43.25 3.56
3154 3433 7.646922 GGCTTAGTTTTTCAGATATGCTCAATG 59.353 37.037 0.00 0.00 0.00 2.82
3155 3434 7.467811 CGGCTTAGTTTTTCAGATATGCTCAAT 60.468 37.037 0.00 0.00 0.00 2.57
3156 3435 6.183360 CGGCTTAGTTTTTCAGATATGCTCAA 60.183 38.462 0.00 0.00 0.00 3.02
3157 3436 5.294306 CGGCTTAGTTTTTCAGATATGCTCA 59.706 40.000 0.00 0.00 0.00 4.26
3158 3437 5.277538 CCGGCTTAGTTTTTCAGATATGCTC 60.278 44.000 0.00 0.00 0.00 4.26
3159 3438 4.576463 CCGGCTTAGTTTTTCAGATATGCT 59.424 41.667 0.00 0.00 0.00 3.79
3160 3439 4.574828 TCCGGCTTAGTTTTTCAGATATGC 59.425 41.667 0.00 0.00 0.00 3.14
3161 3440 6.677781 TTCCGGCTTAGTTTTTCAGATATG 57.322 37.500 0.00 0.00 0.00 1.78
3162 3441 9.220767 GATATTCCGGCTTAGTTTTTCAGATAT 57.779 33.333 0.00 0.00 0.00 1.63
3163 3442 8.208224 TGATATTCCGGCTTAGTTTTTCAGATA 58.792 33.333 0.00 0.00 0.00 1.98
3164 3443 7.054124 TGATATTCCGGCTTAGTTTTTCAGAT 58.946 34.615 0.00 0.00 0.00 2.90
3165 3444 6.411376 TGATATTCCGGCTTAGTTTTTCAGA 58.589 36.000 0.00 0.00 0.00 3.27
3166 3445 6.677781 TGATATTCCGGCTTAGTTTTTCAG 57.322 37.500 0.00 0.00 0.00 3.02
3167 3446 7.054124 AGATGATATTCCGGCTTAGTTTTTCA 58.946 34.615 0.00 0.00 0.00 2.69
3168 3447 7.497925 AGATGATATTCCGGCTTAGTTTTTC 57.502 36.000 0.00 0.00 0.00 2.29
3169 3448 7.556275 TGAAGATGATATTCCGGCTTAGTTTTT 59.444 33.333 0.00 0.00 0.00 1.94
3170 3449 7.054124 TGAAGATGATATTCCGGCTTAGTTTT 58.946 34.615 0.00 0.00 0.00 2.43
3171 3450 6.591935 TGAAGATGATATTCCGGCTTAGTTT 58.408 36.000 0.00 0.00 0.00 2.66
3172 3451 6.042093 TCTGAAGATGATATTCCGGCTTAGTT 59.958 38.462 0.00 0.00 0.00 2.24
3173 3452 5.540337 TCTGAAGATGATATTCCGGCTTAGT 59.460 40.000 0.00 0.00 0.00 2.24
3174 3453 6.030548 TCTGAAGATGATATTCCGGCTTAG 57.969 41.667 0.00 0.00 0.00 2.18
3175 3454 6.611613 ATCTGAAGATGATATTCCGGCTTA 57.388 37.500 0.00 0.00 32.68 3.09
3176 3455 4.963318 TCTGAAGATGATATTCCGGCTT 57.037 40.909 0.00 0.00 0.00 4.35
3177 3456 5.495926 AATCTGAAGATGATATTCCGGCT 57.504 39.130 0.00 0.00 34.49 5.52
3178 3457 6.566197 AAAATCTGAAGATGATATTCCGGC 57.434 37.500 0.00 0.00 34.49 6.13
3179 3458 7.661437 TGGTAAAATCTGAAGATGATATTCCGG 59.339 37.037 0.00 0.00 34.49 5.14
3180 3459 8.607441 TGGTAAAATCTGAAGATGATATTCCG 57.393 34.615 0.00 0.00 34.49 4.30
3182 3461 9.890352 GCTTGGTAAAATCTGAAGATGATATTC 57.110 33.333 0.00 0.00 34.49 1.75
3183 3462 8.854117 GGCTTGGTAAAATCTGAAGATGATATT 58.146 33.333 0.00 0.00 34.49 1.28
3184 3463 7.173907 CGGCTTGGTAAAATCTGAAGATGATAT 59.826 37.037 0.00 0.00 34.49 1.63
3185 3464 6.483307 CGGCTTGGTAAAATCTGAAGATGATA 59.517 38.462 0.00 0.00 34.49 2.15
3186 3465 5.297776 CGGCTTGGTAAAATCTGAAGATGAT 59.702 40.000 0.00 0.00 34.49 2.45
3187 3466 4.635765 CGGCTTGGTAAAATCTGAAGATGA 59.364 41.667 0.00 0.00 34.49 2.92
3188 3467 4.201950 CCGGCTTGGTAAAATCTGAAGATG 60.202 45.833 0.00 0.00 34.49 2.90
3189 3468 3.947834 CCGGCTTGGTAAAATCTGAAGAT 59.052 43.478 0.00 0.00 36.07 2.40
3190 3469 3.343617 CCGGCTTGGTAAAATCTGAAGA 58.656 45.455 0.00 0.00 0.00 2.87
3191 3470 2.159379 GCCGGCTTGGTAAAATCTGAAG 60.159 50.000 22.15 0.00 41.21 3.02
3192 3471 1.816224 GCCGGCTTGGTAAAATCTGAA 59.184 47.619 22.15 0.00 41.21 3.02
3193 3472 1.271652 TGCCGGCTTGGTAAAATCTGA 60.272 47.619 29.70 0.00 41.21 3.27
3194 3473 1.173043 TGCCGGCTTGGTAAAATCTG 58.827 50.000 29.70 0.00 41.21 2.90
3195 3474 2.143876 ATGCCGGCTTGGTAAAATCT 57.856 45.000 29.70 0.00 41.21 2.40
3196 3475 3.702330 GTTATGCCGGCTTGGTAAAATC 58.298 45.455 29.70 6.43 41.21 2.17
3197 3476 2.098443 CGTTATGCCGGCTTGGTAAAAT 59.902 45.455 29.70 12.57 41.21 1.82
3198 3477 1.469308 CGTTATGCCGGCTTGGTAAAA 59.531 47.619 29.70 9.25 41.21 1.52
3199 3478 1.088306 CGTTATGCCGGCTTGGTAAA 58.912 50.000 29.70 9.65 41.21 2.01
3200 3479 0.036199 ACGTTATGCCGGCTTGGTAA 60.036 50.000 29.70 17.45 41.21 2.85
3201 3480 0.460635 GACGTTATGCCGGCTTGGTA 60.461 55.000 29.70 7.00 41.21 3.25
3202 3481 1.743995 GACGTTATGCCGGCTTGGT 60.744 57.895 29.70 19.76 41.21 3.67
3203 3482 0.179094 TAGACGTTATGCCGGCTTGG 60.179 55.000 29.70 16.76 46.00 3.61
3204 3483 0.928229 GTAGACGTTATGCCGGCTTG 59.072 55.000 29.70 14.68 46.00 4.01
3205 3484 0.822164 AGTAGACGTTATGCCGGCTT 59.178 50.000 29.70 24.47 46.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.