Multiple sequence alignment - TraesCS2A01G363800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G363800 chr2A 100.000 4256 0 0 1 4256 607844624 607840369 0.000000e+00 7860.0
1 TraesCS2A01G363800 chr2D 89.002 2064 122 53 1 2008 466726692 466724678 0.000000e+00 2457.0
2 TraesCS2A01G363800 chr2D 90.724 1671 71 49 2090 3709 466724679 466723042 0.000000e+00 2150.0
3 TraesCS2A01G363800 chr2D 90.295 237 15 3 3719 3947 466722847 466722611 1.920000e-78 303.0
4 TraesCS2A01G363800 chr2B 89.417 1871 120 29 2090 3947 545366694 545364889 0.000000e+00 2287.0
5 TraesCS2A01G363800 chr2B 85.277 1895 166 52 1 1852 545368676 545366852 0.000000e+00 1849.0
6 TraesCS2A01G363800 chr6D 88.312 154 13 3 2755 2904 292737751 292737599 3.380000e-41 180.0
7 TraesCS2A01G363800 chr6A 87.742 155 15 2 2748 2898 428426480 428426634 1.220000e-40 178.0
8 TraesCS2A01G363800 chr6A 97.368 38 1 0 3948 3985 340194126 340194089 9.880000e-07 65.8
9 TraesCS2A01G363800 chr6B 87.662 154 14 3 2755 2904 457216778 457216626 1.570000e-39 174.0
10 TraesCS2A01G363800 chr1B 97.849 93 1 1 2004 2095 296490616 296490708 4.400000e-35 159.0
11 TraesCS2A01G363800 chr5B 97.802 91 2 0 2004 2094 517417478 517417388 1.580000e-34 158.0
12 TraesCS2A01G363800 chr3D 98.864 88 1 0 2007 2094 71371520 71371433 1.580000e-34 158.0
13 TraesCS2A01G363800 chr1A 95.000 100 4 1 1992 2091 133417561 133417463 5.700000e-34 156.0
14 TraesCS2A01G363800 chr1A 89.610 77 8 0 3940 4016 535335106 535335182 9.740000e-17 99.0
15 TraesCS2A01G363800 chr1A 86.207 87 10 2 3948 4033 292500877 292500962 4.530000e-15 93.5
16 TraesCS2A01G363800 chr3A 96.774 93 2 1 2000 2092 42130276 42130185 2.050000e-33 154.0
17 TraesCS2A01G363800 chr3A 80.851 141 21 6 3948 4084 746623514 746623652 5.820000e-19 106.0
18 TraesCS2A01G363800 chr5A 94.000 100 4 2 2007 2104 451716435 451716336 2.650000e-32 150.0
19 TraesCS2A01G363800 chr5A 88.542 96 9 2 2755 2849 676887309 676887403 9.670000e-22 115.0
20 TraesCS2A01G363800 chr4B 89.831 118 9 3 2007 2123 629939750 629939865 9.530000e-32 148.0
21 TraesCS2A01G363800 chr4B 93.137 102 6 1 1992 2092 630098729 630098830 9.530000e-32 148.0
22 TraesCS2A01G363800 chr4B 88.542 96 9 2 2755 2849 637622199 637622293 9.670000e-22 115.0
23 TraesCS2A01G363800 chr7B 91.589 107 6 3 2007 2113 544134559 544134456 1.230000e-30 145.0
24 TraesCS2A01G363800 chr5D 84.874 119 13 5 3935 4049 430537295 430537178 9.670000e-22 115.0
25 TraesCS2A01G363800 chr4D 88.542 96 9 2 2755 2849 497126484 497126578 9.670000e-22 115.0
26 TraesCS2A01G363800 chr4D 90.789 76 5 2 2753 2827 506606766 506606692 2.710000e-17 100.0
27 TraesCS2A01G363800 chr1D 74.455 321 55 22 3947 4255 469036614 469036919 3.480000e-21 113.0
28 TraesCS2A01G363800 chr1D 80.282 142 21 7 3948 4084 161033083 161033222 2.710000e-17 100.0
29 TraesCS2A01G363800 chr1D 82.114 123 16 6 3948 4067 491589977 491590096 2.710000e-17 100.0
30 TraesCS2A01G363800 chr7D 82.051 117 18 3 3938 4053 616925565 616925679 3.500000e-16 97.1
31 TraesCS2A01G363800 chr4A 88.710 62 7 0 4194 4255 37295376 37295437 4.560000e-10 76.8
32 TraesCS2A01G363800 chr3B 95.349 43 1 1 3944 3985 756252851 756252893 2.750000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G363800 chr2A 607840369 607844624 4255 True 7860.000000 7860 100.000 1 4256 1 chr2A.!!$R1 4255
1 TraesCS2A01G363800 chr2D 466722611 466726692 4081 True 1636.666667 2457 90.007 1 3947 3 chr2D.!!$R1 3946
2 TraesCS2A01G363800 chr2B 545364889 545368676 3787 True 2068.000000 2287 87.347 1 3947 2 chr2B.!!$R1 3946

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
637 658 0.746659 GGCATTTTGGGGAATCTCCG 59.253 55.0 0.00 0.0 37.43 4.63 F
1326 1388 0.249531 TTTGTCGCTGCAAGTACGGA 60.250 50.0 0.00 0.0 35.30 4.69 F
1468 1535 0.444260 GCGAGTTCACAAAGCTAGCC 59.556 55.0 12.13 0.0 0.00 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1503 1570 0.108520 ACGAACACACACAAGACCGT 60.109 50.0 0.0 0.0 0.00 4.83 R
2216 2383 0.882042 GCCGCTAGTGCTGTGCATAT 60.882 55.0 0.0 0.0 41.91 1.78 R
3426 3658 0.304705 CAACGTGTCACCAACTGAGC 59.695 55.0 0.0 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 41 1.019278 GCACTGCGATCGAAAAGGGA 61.019 55.000 21.57 0.00 0.00 4.20
42 44 1.421410 CTGCGATCGAAAAGGGACGG 61.421 60.000 21.57 0.00 0.00 4.79
51 53 4.892433 TCGAAAAGGGACGGTTACAATTA 58.108 39.130 0.00 0.00 0.00 1.40
54 56 7.102346 TCGAAAAGGGACGGTTACAATTATTA 58.898 34.615 0.00 0.00 0.00 0.98
61 63 9.245481 AGGGACGGTTACAATTATTATTTTTGA 57.755 29.630 0.00 0.00 0.00 2.69
84 86 5.505181 AGAAAGAACAATTCTAGGAGGCA 57.495 39.130 0.00 0.00 39.61 4.75
122 124 8.223100 GGTCTTGTGAAATGCAATATTTTCAAC 58.777 33.333 13.33 8.84 41.90 3.18
180 182 5.420725 TCTTCCATTGAAAGATTCCTCGA 57.579 39.130 0.00 0.00 0.00 4.04
207 209 6.263617 TCGTGTAAATAAAATTATGAGGGCCC 59.736 38.462 16.46 16.46 0.00 5.80
213 215 1.244366 AATTATGAGGGCCCCATGGT 58.756 50.000 27.12 16.53 0.00 3.55
232 236 8.038351 CCCATGGTATTCGTATATGATGTAACA 58.962 37.037 11.73 7.62 0.00 2.41
243 247 3.046968 TGATGTAACAGGCTTAACGCA 57.953 42.857 0.00 0.00 41.67 5.24
276 281 5.014544 ACCTCTCTTCAAAATTCATGGGAGA 59.985 40.000 0.00 12.40 0.00 3.71
300 305 6.072112 ACTCGTTTGTATCAAACATTTGCT 57.928 33.333 20.18 0.00 38.10 3.91
314 319 9.033481 TCAAACATTTGCTGAATTCTAACAAAG 57.967 29.630 18.87 14.84 38.05 2.77
315 320 9.033481 CAAACATTTGCTGAATTCTAACAAAGA 57.967 29.630 18.87 5.47 34.08 2.52
351 356 5.968387 AGTTTTACAGTTTCGACTCACTG 57.032 39.130 14.30 14.30 45.15 3.66
354 359 1.571919 ACAGTTTCGACTCACTGCAC 58.428 50.000 15.37 0.00 43.72 4.57
373 378 3.060895 GCACTGATTGTAGTCGTTGCTAC 59.939 47.826 7.32 7.32 41.13 3.58
383 388 2.159421 AGTCGTTGCTACATGGTCTACG 60.159 50.000 0.00 4.87 0.00 3.51
403 415 8.056571 GTCTACGTAACTGAATGTGATTTATGC 58.943 37.037 0.00 0.00 0.00 3.14
412 424 7.281774 ACTGAATGTGATTTATGCTACTTCTGG 59.718 37.037 0.00 0.00 0.00 3.86
424 436 5.865085 TGCTACTTCTGGTGTTCTTTGTAT 58.135 37.500 0.00 0.00 0.00 2.29
428 440 5.133221 ACTTCTGGTGTTCTTTGTATTGCT 58.867 37.500 0.00 0.00 0.00 3.91
436 448 6.403636 GGTGTTCTTTGTATTGCTATGACAGG 60.404 42.308 0.00 0.00 0.00 4.00
438 450 7.333423 GTGTTCTTTGTATTGCTATGACAGGTA 59.667 37.037 0.00 0.00 0.00 3.08
439 451 7.333423 TGTTCTTTGTATTGCTATGACAGGTAC 59.667 37.037 0.00 0.00 0.00 3.34
440 452 6.040247 TCTTTGTATTGCTATGACAGGTACG 58.960 40.000 0.00 0.00 0.00 3.67
441 453 3.713288 TGTATTGCTATGACAGGTACGC 58.287 45.455 0.00 0.00 0.00 4.42
442 454 3.383505 TGTATTGCTATGACAGGTACGCT 59.616 43.478 0.00 0.00 0.00 5.07
443 455 2.293677 TTGCTATGACAGGTACGCTG 57.706 50.000 9.12 9.12 0.00 5.18
444 456 1.470051 TGCTATGACAGGTACGCTGA 58.530 50.000 15.59 0.00 0.00 4.26
445 457 2.031870 TGCTATGACAGGTACGCTGAT 58.968 47.619 15.59 5.13 0.00 2.90
448 460 3.490933 GCTATGACAGGTACGCTGATGAA 60.491 47.826 15.59 2.24 0.00 2.57
452 464 3.119291 GACAGGTACGCTGATGAATGAG 58.881 50.000 15.59 0.00 0.00 2.90
453 465 2.497675 ACAGGTACGCTGATGAATGAGT 59.502 45.455 15.59 0.00 0.00 3.41
454 466 3.119291 CAGGTACGCTGATGAATGAGTC 58.881 50.000 5.67 0.00 0.00 3.36
455 467 2.120232 GGTACGCTGATGAATGAGTCG 58.880 52.381 0.00 0.00 0.00 4.18
456 468 2.223502 GGTACGCTGATGAATGAGTCGA 60.224 50.000 0.00 0.00 0.00 4.20
457 469 2.654749 ACGCTGATGAATGAGTCGAA 57.345 45.000 0.00 0.00 0.00 3.71
458 470 2.534298 ACGCTGATGAATGAGTCGAAG 58.466 47.619 0.00 0.00 0.00 3.79
459 471 2.094494 ACGCTGATGAATGAGTCGAAGT 60.094 45.455 0.00 0.00 0.00 3.01
460 472 2.926200 CGCTGATGAATGAGTCGAAGTT 59.074 45.455 0.00 0.00 0.00 2.66
461 473 3.369147 CGCTGATGAATGAGTCGAAGTTT 59.631 43.478 0.00 0.00 0.00 2.66
462 474 4.143030 CGCTGATGAATGAGTCGAAGTTTT 60.143 41.667 0.00 0.00 0.00 2.43
463 475 5.615544 CGCTGATGAATGAGTCGAAGTTTTT 60.616 40.000 0.00 0.00 0.00 1.94
504 517 6.519679 TGGTTGATTCTTCCAAATCATGAG 57.480 37.500 0.09 0.00 43.30 2.90
600 621 4.836825 AGTGAGAGAGAGAGACAGAAGAG 58.163 47.826 0.00 0.00 0.00 2.85
609 630 6.553100 AGAGAGAGACAGAAGAGAAGGAAAAA 59.447 38.462 0.00 0.00 0.00 1.94
637 658 0.746659 GGCATTTTGGGGAATCTCCG 59.253 55.000 0.00 0.00 37.43 4.63
793 825 2.224892 GGAGGAAAGAAAGGTTGCCTCT 60.225 50.000 9.97 0.00 41.22 3.69
798 830 1.000771 GAAAGGTTGCCTCTCCCCC 60.001 63.158 0.00 0.00 30.89 5.40
928 972 0.868406 GCAACGTGCTCAGCTTAGTT 59.132 50.000 0.00 0.00 40.96 2.24
960 1012 5.659463 CAGTGCTATCTCTTTCAGCTAAGT 58.341 41.667 0.00 0.00 36.26 2.24
1208 1268 7.441458 CCTAATTAATTAACTCGAGGTTCCTGG 59.559 40.741 18.41 0.00 39.17 4.45
1227 1287 7.825331 TCCTGGATGAACAGATTACTACTAG 57.175 40.000 0.00 0.00 40.97 2.57
1228 1288 7.355101 TCCTGGATGAACAGATTACTACTAGT 58.645 38.462 0.00 0.00 40.97 2.57
1279 1341 5.808042 TGATCTGATGTTTTCTAGCTTGC 57.192 39.130 0.00 0.00 0.00 4.01
1326 1388 0.249531 TTTGTCGCTGCAAGTACGGA 60.250 50.000 0.00 0.00 35.30 4.69
1340 1402 2.910977 AGTACGGACCTCCTTTTCCAAT 59.089 45.455 0.00 0.00 0.00 3.16
1345 1407 3.442625 CGGACCTCCTTTTCCAATTAACC 59.557 47.826 0.00 0.00 0.00 2.85
1346 1408 3.767673 GGACCTCCTTTTCCAATTAACCC 59.232 47.826 0.00 0.00 0.00 4.11
1347 1409 3.427573 ACCTCCTTTTCCAATTAACCCG 58.572 45.455 0.00 0.00 0.00 5.28
1348 1410 2.758423 CCTCCTTTTCCAATTAACCCGG 59.242 50.000 0.00 0.00 0.00 5.73
1366 1430 3.114616 CCGGCTCGTCTGCAACTG 61.115 66.667 0.00 0.00 34.04 3.16
1451 1518 1.206578 CAAGTACCGGCAACTTGCG 59.793 57.895 27.72 12.94 46.21 4.85
1466 1533 2.802816 ACTTGCGAGTTCACAAAGCTAG 59.197 45.455 0.00 0.00 36.89 3.42
1467 1534 1.148310 TGCGAGTTCACAAAGCTAGC 58.852 50.000 6.62 6.62 0.00 3.42
1468 1535 0.444260 GCGAGTTCACAAAGCTAGCC 59.556 55.000 12.13 0.00 0.00 3.93
1469 1536 0.716108 CGAGTTCACAAAGCTAGCCG 59.284 55.000 12.13 2.68 0.00 5.52
1500 1567 4.313282 CATGCATGATTCGATCCTGTACT 58.687 43.478 22.59 0.00 0.00 2.73
1503 1570 4.340950 TGCATGATTCGATCCTGTACTGTA 59.659 41.667 0.00 0.00 0.00 2.74
1504 1571 4.681942 GCATGATTCGATCCTGTACTGTAC 59.318 45.833 10.98 10.98 0.00 2.90
1505 1572 4.547406 TGATTCGATCCTGTACTGTACG 57.453 45.455 12.87 7.87 0.00 3.67
1506 1573 3.314357 TGATTCGATCCTGTACTGTACGG 59.686 47.826 17.89 17.89 34.81 4.02
1507 1574 2.408271 TCGATCCTGTACTGTACGGT 57.592 50.000 21.77 12.92 33.14 4.83
1508 1575 2.283298 TCGATCCTGTACTGTACGGTC 58.717 52.381 21.77 14.17 33.14 4.79
1509 1576 2.093288 TCGATCCTGTACTGTACGGTCT 60.093 50.000 21.77 10.92 33.14 3.85
1510 1577 2.681848 CGATCCTGTACTGTACGGTCTT 59.318 50.000 21.77 8.92 33.14 3.01
1532 1599 2.033662 GTGTGTGTTCGTCTCTTCTTGC 60.034 50.000 0.00 0.00 0.00 4.01
1546 1613 3.131223 TCTTCTTGCTAGGACGAAGATGG 59.869 47.826 23.58 5.38 37.53 3.51
1550 1617 2.388735 TGCTAGGACGAAGATGGTGAT 58.611 47.619 0.00 0.00 0.00 3.06
1551 1618 2.101415 TGCTAGGACGAAGATGGTGATG 59.899 50.000 0.00 0.00 0.00 3.07
1552 1619 2.362397 GCTAGGACGAAGATGGTGATGA 59.638 50.000 0.00 0.00 0.00 2.92
1577 1648 2.891580 ACCTAACGCTCTCTTTCACTCA 59.108 45.455 0.00 0.00 0.00 3.41
1603 1674 7.917505 ACGCATTGAAATTTCTTGGAGAATATC 59.082 33.333 18.64 4.61 33.67 1.63
1622 1693 1.148310 CGTCAGTGCGTTCCTTTGAT 58.852 50.000 0.00 0.00 0.00 2.57
1623 1694 1.136252 CGTCAGTGCGTTCCTTTGATG 60.136 52.381 0.00 0.00 0.00 3.07
1625 1696 2.158449 GTCAGTGCGTTCCTTTGATGAG 59.842 50.000 0.00 0.00 0.00 2.90
1626 1697 2.037121 TCAGTGCGTTCCTTTGATGAGA 59.963 45.455 0.00 0.00 0.00 3.27
1627 1698 3.005554 CAGTGCGTTCCTTTGATGAGAT 58.994 45.455 0.00 0.00 0.00 2.75
1629 1700 4.074970 AGTGCGTTCCTTTGATGAGATTT 58.925 39.130 0.00 0.00 0.00 2.17
1655 1727 9.506018 TCAATCATCAATTCTTCAACTCTACAA 57.494 29.630 0.00 0.00 0.00 2.41
1877 1954 6.032042 CGCGTTTGTTGAGGTGAAAAATATAC 59.968 38.462 0.00 0.00 0.00 1.47
1914 1991 5.373812 AAACTAAGTGTAGCATGGCCTAT 57.626 39.130 3.32 0.00 0.00 2.57
1915 1992 6.494666 AAACTAAGTGTAGCATGGCCTATA 57.505 37.500 3.32 0.00 0.00 1.31
1921 1998 4.003648 GTGTAGCATGGCCTATAATGGAC 58.996 47.826 3.32 0.00 35.14 4.02
2000 2158 4.253685 AGTGTTGGACGAATAATCACCAG 58.746 43.478 0.00 0.00 34.61 4.00
2006 2164 7.773224 TGTTGGACGAATAATCACCAGATAATT 59.227 33.333 0.00 0.00 34.61 1.40
2007 2165 9.268268 GTTGGACGAATAATCACCAGATAATTA 57.732 33.333 0.00 0.00 34.61 1.40
2008 2166 8.827177 TGGACGAATAATCACCAGATAATTAC 57.173 34.615 0.00 0.00 33.08 1.89
2009 2167 8.647796 TGGACGAATAATCACCAGATAATTACT 58.352 33.333 0.00 0.00 33.08 2.24
2010 2168 9.141400 GGACGAATAATCACCAGATAATTACTC 57.859 37.037 0.00 0.00 33.08 2.59
2011 2169 9.141400 GACGAATAATCACCAGATAATTACTCC 57.859 37.037 0.00 0.00 33.08 3.85
2012 2170 8.095169 ACGAATAATCACCAGATAATTACTCCC 58.905 37.037 0.00 0.00 33.08 4.30
2013 2171 8.314751 CGAATAATCACCAGATAATTACTCCCT 58.685 37.037 0.00 0.00 33.08 4.20
2014 2172 9.660180 GAATAATCACCAGATAATTACTCCCTC 57.340 37.037 0.00 0.00 33.08 4.30
2015 2173 8.980832 ATAATCACCAGATAATTACTCCCTCT 57.019 34.615 0.00 0.00 33.08 3.69
2016 2174 6.678568 ATCACCAGATAATTACTCCCTCTG 57.321 41.667 6.18 6.18 34.48 3.35
2017 2175 5.529289 TCACCAGATAATTACTCCCTCTGT 58.471 41.667 10.61 0.10 33.16 3.41
2018 2176 6.679542 TCACCAGATAATTACTCCCTCTGTA 58.320 40.000 10.61 0.00 33.16 2.74
2019 2177 7.130099 TCACCAGATAATTACTCCCTCTGTAA 58.870 38.462 10.61 0.00 33.16 2.41
2020 2178 7.622081 TCACCAGATAATTACTCCCTCTGTAAA 59.378 37.037 10.61 0.00 34.20 2.01
2021 2179 7.711339 CACCAGATAATTACTCCCTCTGTAAAC 59.289 40.741 10.61 0.00 34.20 2.01
2022 2180 7.624077 ACCAGATAATTACTCCCTCTGTAAACT 59.376 37.037 10.61 0.00 34.20 2.66
2023 2181 9.144298 CCAGATAATTACTCCCTCTGTAAACTA 57.856 37.037 10.61 0.00 34.20 2.24
2033 2191 9.939424 ACTCCCTCTGTAAACTAATATAAGAGT 57.061 33.333 0.00 0.00 0.00 3.24
2067 2225 7.393841 ACTAAAGTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 37.69 4.09
2068 2226 7.828712 ACTAAAGTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 37.69 2.85
2069 2227 8.954350 ACTAAAGTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 37.69 2.10
2070 2228 9.953697 CTAAAGTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
2082 2240 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
2083 2241 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
2084 2242 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
2085 2243 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
2086 2244 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
2087 2245 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
2088 2246 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
2157 2318 6.946340 TCAGATGGAAAGACATTAGCACTTA 58.054 36.000 0.00 0.00 0.00 2.24
2317 2494 2.124942 CCCTGGGCTCGAGCTTTC 60.125 66.667 34.46 23.73 41.70 2.62
2331 2508 2.477880 CTTTCGGGTAAAGCCGCAT 58.522 52.632 15.48 0.00 38.32 4.73
2332 2509 0.098728 CTTTCGGGTAAAGCCGCATG 59.901 55.000 15.48 3.90 38.32 4.06
2333 2510 1.928706 TTTCGGGTAAAGCCGCATGC 61.929 55.000 15.48 7.91 38.44 4.06
2334 2511 3.130819 CGGGTAAAGCCGCATGCA 61.131 61.111 19.57 0.00 44.83 3.96
2339 2516 0.458370 GTAAAGCCGCATGCAAAGGG 60.458 55.000 19.57 11.79 44.83 3.95
2451 2636 4.752879 CCACCCCTGCGTGGTACG 62.753 72.222 0.00 0.00 46.97 3.67
2452 2637 3.998672 CACCCCTGCGTGGTACGT 61.999 66.667 0.00 0.00 44.73 3.57
2453 2638 2.283101 ACCCCTGCGTGGTACGTA 60.283 61.111 3.19 0.00 44.73 3.57
2492 2680 4.227300 TGTGGTAATCTAATCACTTGGCCT 59.773 41.667 3.32 0.00 0.00 5.19
2515 2703 2.354403 CCCCCGAGTACGTTTCTCATTT 60.354 50.000 16.61 0.00 37.88 2.32
2516 2704 2.671396 CCCCGAGTACGTTTCTCATTTG 59.329 50.000 16.61 4.58 37.88 2.32
2517 2705 3.581755 CCCGAGTACGTTTCTCATTTGA 58.418 45.455 16.61 0.00 37.88 2.69
2518 2706 3.612860 CCCGAGTACGTTTCTCATTTGAG 59.387 47.826 16.61 0.97 39.48 3.02
2519 2707 3.060895 CCGAGTACGTTTCTCATTTGAGC 59.939 47.826 16.61 0.00 38.70 4.26
2520 2708 3.921021 CGAGTACGTTTCTCATTTGAGCT 59.079 43.478 16.61 0.00 37.13 4.09
2521 2709 4.386049 CGAGTACGTTTCTCATTTGAGCTT 59.614 41.667 16.61 0.00 37.13 3.74
2522 2710 5.107453 CGAGTACGTTTCTCATTTGAGCTTT 60.107 40.000 16.61 0.00 37.13 3.51
2523 2711 5.990408 AGTACGTTTCTCATTTGAGCTTTG 58.010 37.500 0.00 0.00 41.80 2.77
2524 2712 3.632189 ACGTTTCTCATTTGAGCTTTGC 58.368 40.909 2.60 0.00 41.80 3.68
2525 2713 3.066621 ACGTTTCTCATTTGAGCTTTGCA 59.933 39.130 2.60 0.00 41.80 4.08
2526 2714 4.232221 CGTTTCTCATTTGAGCTTTGCAT 58.768 39.130 2.60 0.00 41.80 3.96
2715 2941 6.471146 ACTGATCAGCTGAAACAATAGACTT 58.529 36.000 22.50 0.00 0.00 3.01
2719 2945 6.545504 TCAGCTGAAACAATAGACTTGAAC 57.454 37.500 15.67 0.00 0.00 3.18
2720 2946 5.177511 TCAGCTGAAACAATAGACTTGAACG 59.822 40.000 15.67 0.00 0.00 3.95
2724 2950 6.389622 TGAAACAATAGACTTGAACGATCG 57.610 37.500 14.88 14.88 0.00 3.69
2729 2955 2.270275 AGACTTGAACGATCGAGCTG 57.730 50.000 24.34 9.91 40.28 4.24
2892 3118 4.393155 TTCCTGATGCAGCGGCGT 62.393 61.111 9.37 2.22 45.35 5.68
2997 3226 1.225691 GGACGACGTCGACGAGAAG 60.226 63.158 41.52 28.27 43.02 2.85
3001 3230 0.369248 CGACGTCGACGAGAAGATGA 59.631 55.000 41.52 0.00 43.02 2.92
3002 3231 1.800399 GACGTCGACGAGAAGATGAC 58.200 55.000 41.52 16.92 43.02 3.06
3007 3236 1.511305 GACGAGAAGATGACCGGCA 59.489 57.895 0.00 0.00 0.00 5.69
3008 3237 0.108804 GACGAGAAGATGACCGGCAA 60.109 55.000 0.00 0.00 0.00 4.52
3072 3301 0.179089 AGCTGATCATGCAGGACGTC 60.179 55.000 1.71 7.13 36.41 4.34
3073 3302 0.179089 GCTGATCATGCAGGACGTCT 60.179 55.000 16.46 0.00 36.41 4.18
3213 3442 0.670854 GCCTGTGGAACCTCGAAGAC 60.671 60.000 0.00 0.00 34.36 3.01
3295 3527 1.287815 TCGCGGCGAGAGAAAAAGA 59.712 52.632 22.69 0.00 0.00 2.52
3386 3618 2.430465 AGTGATGGATAATGATGCGGC 58.570 47.619 0.00 0.00 0.00 6.53
3387 3619 2.153645 GTGATGGATAATGATGCGGCA 58.846 47.619 4.58 4.58 0.00 5.69
3388 3620 2.553602 GTGATGGATAATGATGCGGCAA 59.446 45.455 6.82 0.00 0.00 4.52
3426 3658 2.463589 TACGCCCACTTTGCAGGAGG 62.464 60.000 4.47 2.06 0.00 4.30
3455 3687 0.937304 TGACACGTTGAAAGCTCTGC 59.063 50.000 0.00 0.00 0.00 4.26
3514 3746 1.571460 GTTGGCACTGACGAAGCTG 59.429 57.895 0.00 0.00 0.00 4.24
3523 3755 1.270826 CTGACGAAGCTGTCTTCCTGA 59.729 52.381 5.85 0.00 44.50 3.86
3526 3758 0.734253 CGAAGCTGTCTTCCTGACCG 60.734 60.000 0.00 0.00 44.50 4.79
3538 3770 1.513158 CTGACCGGTGCCTACTCAG 59.487 63.158 14.63 7.42 0.00 3.35
3551 3783 2.692557 CCTACTCAGACATCAGGGACAG 59.307 54.545 0.00 0.00 0.00 3.51
3625 3857 5.936686 TTATCTCTGAGTATTACGTCGGG 57.063 43.478 4.32 0.00 0.00 5.14
3689 3921 3.340034 TGGTCTGTTTAACCGCCTATTG 58.660 45.455 0.00 0.00 39.81 1.90
3701 3933 4.076394 ACCGCCTATTGTTTAACACATGT 58.924 39.130 0.00 0.00 34.43 3.21
3709 3941 7.822334 CCTATTGTTTAACACATGTCAGGACTA 59.178 37.037 0.00 0.00 34.43 2.59
3710 3942 7.672983 ATTGTTTAACACATGTCAGGACTAG 57.327 36.000 0.00 0.00 34.43 2.57
3717 3949 3.197766 CACATGTCAGGACTAGCCCTTAA 59.802 47.826 0.00 0.00 37.37 1.85
3724 4141 3.947834 CAGGACTAGCCCTTAATGGTTTG 59.052 47.826 0.00 0.00 37.37 2.93
3785 4202 0.507358 GAACTCGAACGCTTGGTGAC 59.493 55.000 0.00 0.00 0.00 3.67
3820 4245 2.669569 AAGCAACGCCGTGAGCAT 60.670 55.556 15.75 2.62 44.04 3.79
3821 4246 2.839324 GAAGCAACGCCGTGAGCATG 62.839 60.000 15.75 0.00 44.04 4.06
3825 4250 2.334946 AACGCCGTGAGCATGCAAT 61.335 52.632 21.98 0.00 44.04 3.56
3918 4343 2.095718 GTGCTCTAACCGGCTTTTTCAG 60.096 50.000 0.00 0.00 0.00 3.02
3947 4372 5.515270 GGCTACTTCGCATGGTTTTATTTTC 59.485 40.000 0.00 0.00 0.00 2.29
3948 4373 5.227184 GCTACTTCGCATGGTTTTATTTTCG 59.773 40.000 0.00 0.00 0.00 3.46
3949 4374 4.481463 ACTTCGCATGGTTTTATTTTCGG 58.519 39.130 0.00 0.00 0.00 4.30
3950 4375 4.022676 ACTTCGCATGGTTTTATTTTCGGT 60.023 37.500 0.00 0.00 0.00 4.69
3951 4376 4.506886 TCGCATGGTTTTATTTTCGGTT 57.493 36.364 0.00 0.00 0.00 4.44
3952 4377 4.872664 TCGCATGGTTTTATTTTCGGTTT 58.127 34.783 0.00 0.00 0.00 3.27
3953 4378 5.290386 TCGCATGGTTTTATTTTCGGTTTT 58.710 33.333 0.00 0.00 0.00 2.43
3954 4379 5.175856 TCGCATGGTTTTATTTTCGGTTTTG 59.824 36.000 0.00 0.00 0.00 2.44
3955 4380 5.143660 GCATGGTTTTATTTTCGGTTTTGC 58.856 37.500 0.00 0.00 0.00 3.68
3956 4381 5.049749 GCATGGTTTTATTTTCGGTTTTGCT 60.050 36.000 0.00 0.00 0.00 3.91
3957 4382 6.146347 GCATGGTTTTATTTTCGGTTTTGCTA 59.854 34.615 0.00 0.00 0.00 3.49
3958 4383 7.148490 GCATGGTTTTATTTTCGGTTTTGCTAT 60.148 33.333 0.00 0.00 0.00 2.97
3959 4384 8.716909 CATGGTTTTATTTTCGGTTTTGCTATT 58.283 29.630 0.00 0.00 0.00 1.73
3960 4385 8.664211 TGGTTTTATTTTCGGTTTTGCTATTT 57.336 26.923 0.00 0.00 0.00 1.40
3961 4386 9.110502 TGGTTTTATTTTCGGTTTTGCTATTTT 57.889 25.926 0.00 0.00 0.00 1.82
3966 4391 9.968870 TTATTTTCGGTTTTGCTATTTTACAGT 57.031 25.926 0.00 0.00 0.00 3.55
3967 4392 7.917720 TTTTCGGTTTTGCTATTTTACAGTC 57.082 32.000 0.00 0.00 0.00 3.51
3968 4393 5.272167 TCGGTTTTGCTATTTTACAGTCG 57.728 39.130 0.00 0.00 0.00 4.18
3969 4394 4.989797 TCGGTTTTGCTATTTTACAGTCGA 59.010 37.500 0.00 0.00 0.00 4.20
3970 4395 5.077424 CGGTTTTGCTATTTTACAGTCGAC 58.923 41.667 7.70 7.70 0.00 4.20
3971 4396 5.107220 CGGTTTTGCTATTTTACAGTCGACT 60.107 40.000 13.58 13.58 0.00 4.18
3985 4410 4.833126 CAGTCGACTGTTTTTCAATTCGT 58.167 39.130 32.77 0.00 39.09 3.85
3986 4411 5.263185 CAGTCGACTGTTTTTCAATTCGTT 58.737 37.500 32.77 0.00 39.09 3.85
3987 4412 5.169561 CAGTCGACTGTTTTTCAATTCGTTG 59.830 40.000 32.77 6.27 39.09 4.10
3988 4413 5.025826 GTCGACTGTTTTTCAATTCGTTGT 58.974 37.500 8.70 0.00 34.90 3.32
3989 4414 5.169032 GTCGACTGTTTTTCAATTCGTTGTC 59.831 40.000 8.70 0.00 34.90 3.18
3990 4415 5.025190 CGACTGTTTTTCAATTCGTTGTCA 58.975 37.500 0.00 0.00 31.21 3.58
3991 4416 5.681105 CGACTGTTTTTCAATTCGTTGTCAT 59.319 36.000 0.00 0.00 31.21 3.06
3992 4417 6.196353 CGACTGTTTTTCAATTCGTTGTCATT 59.804 34.615 0.00 0.00 31.21 2.57
3993 4418 7.449934 ACTGTTTTTCAATTCGTTGTCATTC 57.550 32.000 0.00 0.00 0.00 2.67
3994 4419 7.032580 ACTGTTTTTCAATTCGTTGTCATTCA 58.967 30.769 0.00 0.00 0.00 2.57
3995 4420 7.543868 ACTGTTTTTCAATTCGTTGTCATTCAA 59.456 29.630 0.00 0.00 0.00 2.69
3996 4421 8.417780 TGTTTTTCAATTCGTTGTCATTCAAT 57.582 26.923 0.00 0.00 38.38 2.57
3997 4422 8.877779 TGTTTTTCAATTCGTTGTCATTCAATT 58.122 25.926 0.00 0.00 38.38 2.32
3998 4423 9.701355 GTTTTTCAATTCGTTGTCATTCAATTT 57.299 25.926 0.00 0.00 38.38 1.82
3999 4424 9.913451 TTTTTCAATTCGTTGTCATTCAATTTC 57.087 25.926 0.00 0.00 38.38 2.17
4000 4425 8.870160 TTTCAATTCGTTGTCATTCAATTTCT 57.130 26.923 0.00 0.00 38.38 2.52
4001 4426 8.870160 TTCAATTCGTTGTCATTCAATTTCTT 57.130 26.923 0.00 0.00 38.38 2.52
4002 4427 8.284557 TCAATTCGTTGTCATTCAATTTCTTG 57.715 30.769 0.00 0.00 38.38 3.02
4003 4428 7.920151 TCAATTCGTTGTCATTCAATTTCTTGT 59.080 29.630 0.00 0.00 38.38 3.16
4004 4429 7.858052 ATTCGTTGTCATTCAATTTCTTGTC 57.142 32.000 0.00 0.00 38.38 3.18
4005 4430 5.757886 TCGTTGTCATTCAATTTCTTGTCC 58.242 37.500 0.00 0.00 38.38 4.02
4006 4431 4.612614 CGTTGTCATTCAATTTCTTGTCCG 59.387 41.667 0.00 0.00 38.38 4.79
4007 4432 5.519722 GTTGTCATTCAATTTCTTGTCCGT 58.480 37.500 0.00 0.00 38.38 4.69
4008 4433 5.356882 TGTCATTCAATTTCTTGTCCGTC 57.643 39.130 0.00 0.00 33.87 4.79
4009 4434 5.063204 TGTCATTCAATTTCTTGTCCGTCT 58.937 37.500 0.00 0.00 33.87 4.18
4010 4435 5.049474 TGTCATTCAATTTCTTGTCCGTCTG 60.049 40.000 0.00 0.00 33.87 3.51
4011 4436 5.179368 GTCATTCAATTTCTTGTCCGTCTGA 59.821 40.000 0.00 0.00 33.87 3.27
4012 4437 5.939883 TCATTCAATTTCTTGTCCGTCTGAT 59.060 36.000 0.00 0.00 33.87 2.90
4013 4438 5.862924 TTCAATTTCTTGTCCGTCTGATC 57.137 39.130 0.00 0.00 33.87 2.92
4014 4439 5.152623 TCAATTTCTTGTCCGTCTGATCT 57.847 39.130 0.00 0.00 33.87 2.75
4015 4440 5.171476 TCAATTTCTTGTCCGTCTGATCTC 58.829 41.667 0.00 0.00 33.87 2.75
4016 4441 2.921634 TTCTTGTCCGTCTGATCTCG 57.078 50.000 0.00 0.00 0.00 4.04
4017 4442 0.452184 TCTTGTCCGTCTGATCTCGC 59.548 55.000 0.00 0.00 0.00 5.03
4018 4443 0.171231 CTTGTCCGTCTGATCTCGCA 59.829 55.000 0.00 0.00 0.00 5.10
4019 4444 0.109272 TTGTCCGTCTGATCTCGCAC 60.109 55.000 0.00 0.00 0.00 5.34
4020 4445 0.960861 TGTCCGTCTGATCTCGCACT 60.961 55.000 0.00 0.00 0.00 4.40
4021 4446 1.015109 GTCCGTCTGATCTCGCACTA 58.985 55.000 0.00 0.00 0.00 2.74
4022 4447 1.400846 GTCCGTCTGATCTCGCACTAA 59.599 52.381 0.00 0.00 0.00 2.24
4023 4448 1.671328 TCCGTCTGATCTCGCACTAAG 59.329 52.381 0.00 0.00 0.00 2.18
4024 4449 1.671328 CCGTCTGATCTCGCACTAAGA 59.329 52.381 0.00 0.00 0.00 2.10
4025 4450 2.292016 CCGTCTGATCTCGCACTAAGAT 59.708 50.000 0.00 0.00 36.19 2.40
4026 4451 3.243234 CCGTCTGATCTCGCACTAAGATT 60.243 47.826 0.00 0.00 33.64 2.40
4027 4452 3.971871 CGTCTGATCTCGCACTAAGATTC 59.028 47.826 0.00 0.00 33.64 2.52
4028 4453 4.496507 CGTCTGATCTCGCACTAAGATTCA 60.497 45.833 0.00 0.00 33.64 2.57
4029 4454 4.737765 GTCTGATCTCGCACTAAGATTCAC 59.262 45.833 0.00 0.00 33.64 3.18
4030 4455 3.695816 TGATCTCGCACTAAGATTCACG 58.304 45.455 0.00 0.00 33.64 4.35
4031 4456 1.909376 TCTCGCACTAAGATTCACGC 58.091 50.000 0.00 0.00 0.00 5.34
4032 4457 1.472878 TCTCGCACTAAGATTCACGCT 59.527 47.619 0.00 0.00 0.00 5.07
4033 4458 1.585668 CTCGCACTAAGATTCACGCTG 59.414 52.381 0.00 0.00 0.00 5.18
4034 4459 1.201414 TCGCACTAAGATTCACGCTGA 59.799 47.619 0.00 0.00 0.00 4.26
4035 4460 1.585668 CGCACTAAGATTCACGCTGAG 59.414 52.381 0.00 0.00 0.00 3.35
4036 4461 2.732282 CGCACTAAGATTCACGCTGAGA 60.732 50.000 0.00 0.00 0.00 3.27
4037 4462 3.254060 GCACTAAGATTCACGCTGAGAA 58.746 45.455 0.00 0.00 0.00 2.87
4038 4463 3.061429 GCACTAAGATTCACGCTGAGAAC 59.939 47.826 0.00 0.00 0.00 3.01
4039 4464 4.489810 CACTAAGATTCACGCTGAGAACT 58.510 43.478 0.00 0.00 0.00 3.01
4040 4465 4.560819 CACTAAGATTCACGCTGAGAACTC 59.439 45.833 0.00 0.00 0.00 3.01
4041 4466 3.951775 AAGATTCACGCTGAGAACTCT 57.048 42.857 3.51 0.00 0.00 3.24
4042 4467 3.229276 AGATTCACGCTGAGAACTCTG 57.771 47.619 3.51 4.15 0.00 3.35
4043 4468 2.822561 AGATTCACGCTGAGAACTCTGA 59.177 45.455 11.75 1.19 0.00 3.27
4044 4469 3.446873 AGATTCACGCTGAGAACTCTGAT 59.553 43.478 11.75 0.00 0.00 2.90
4045 4470 3.667497 TTCACGCTGAGAACTCTGATT 57.333 42.857 11.75 0.00 0.00 2.57
4046 4471 3.667497 TCACGCTGAGAACTCTGATTT 57.333 42.857 11.75 0.00 0.00 2.17
4047 4472 3.995199 TCACGCTGAGAACTCTGATTTT 58.005 40.909 11.75 0.00 0.00 1.82
4048 4473 3.990469 TCACGCTGAGAACTCTGATTTTC 59.010 43.478 11.75 0.00 0.00 2.29
4049 4474 3.742882 CACGCTGAGAACTCTGATTTTCA 59.257 43.478 11.75 0.00 0.00 2.69
4050 4475 3.993081 ACGCTGAGAACTCTGATTTTCAG 59.007 43.478 11.75 12.05 45.59 3.02
4051 4476 3.370366 CGCTGAGAACTCTGATTTTCAGG 59.630 47.826 11.75 0.00 44.39 3.86
4052 4477 3.126686 GCTGAGAACTCTGATTTTCAGGC 59.873 47.826 11.75 7.92 44.39 4.85
4053 4478 3.329386 TGAGAACTCTGATTTTCAGGCG 58.671 45.455 4.78 0.21 44.39 5.52
4054 4479 3.244215 TGAGAACTCTGATTTTCAGGCGT 60.244 43.478 4.78 0.76 44.39 5.68
4055 4480 3.070018 AGAACTCTGATTTTCAGGCGTG 58.930 45.455 0.00 0.00 44.39 5.34
4056 4481 1.813513 ACTCTGATTTTCAGGCGTGG 58.186 50.000 6.56 0.00 44.39 4.94
4057 4482 1.089920 CTCTGATTTTCAGGCGTGGG 58.910 55.000 6.56 0.00 44.39 4.61
4058 4483 0.400213 TCTGATTTTCAGGCGTGGGT 59.600 50.000 6.56 0.00 44.39 4.51
4059 4484 1.202879 TCTGATTTTCAGGCGTGGGTT 60.203 47.619 6.56 0.00 44.39 4.11
4060 4485 1.200020 CTGATTTTCAGGCGTGGGTTC 59.800 52.381 6.56 0.29 40.71 3.62
4061 4486 0.526211 GATTTTCAGGCGTGGGTTCC 59.474 55.000 6.56 0.00 0.00 3.62
4062 4487 0.112412 ATTTTCAGGCGTGGGTTCCT 59.888 50.000 6.56 0.00 0.00 3.36
4063 4488 0.106419 TTTTCAGGCGTGGGTTCCTT 60.106 50.000 6.56 0.00 0.00 3.36
4064 4489 0.106419 TTTCAGGCGTGGGTTCCTTT 60.106 50.000 6.56 0.00 0.00 3.11
4065 4490 0.821711 TTCAGGCGTGGGTTCCTTTG 60.822 55.000 6.56 0.00 0.00 2.77
4066 4491 1.528309 CAGGCGTGGGTTCCTTTGT 60.528 57.895 0.00 0.00 0.00 2.83
4067 4492 0.250553 CAGGCGTGGGTTCCTTTGTA 60.251 55.000 0.00 0.00 0.00 2.41
4068 4493 0.036306 AGGCGTGGGTTCCTTTGTAG 59.964 55.000 0.00 0.00 0.00 2.74
4069 4494 0.958876 GGCGTGGGTTCCTTTGTAGG 60.959 60.000 0.00 0.00 43.46 3.18
4070 4495 0.958876 GCGTGGGTTCCTTTGTAGGG 60.959 60.000 0.00 0.00 42.26 3.53
4071 4496 0.399075 CGTGGGTTCCTTTGTAGGGT 59.601 55.000 0.00 0.00 42.26 4.34
4072 4497 1.880646 CGTGGGTTCCTTTGTAGGGTG 60.881 57.143 0.00 0.00 42.26 4.61
4073 4498 0.111639 TGGGTTCCTTTGTAGGGTGC 59.888 55.000 0.00 0.00 42.26 5.01
4074 4499 0.958876 GGGTTCCTTTGTAGGGTGCG 60.959 60.000 0.00 0.00 42.26 5.34
4075 4500 0.250597 GGTTCCTTTGTAGGGTGCGT 60.251 55.000 0.00 0.00 42.26 5.24
4076 4501 1.601166 GTTCCTTTGTAGGGTGCGTT 58.399 50.000 0.00 0.00 42.26 4.84
4077 4502 2.550639 GGTTCCTTTGTAGGGTGCGTTA 60.551 50.000 0.00 0.00 42.26 3.18
4078 4503 3.340928 GTTCCTTTGTAGGGTGCGTTAT 58.659 45.455 0.00 0.00 42.26 1.89
4079 4504 3.706600 TCCTTTGTAGGGTGCGTTATT 57.293 42.857 0.00 0.00 42.26 1.40
4080 4505 4.822685 TCCTTTGTAGGGTGCGTTATTA 57.177 40.909 0.00 0.00 42.26 0.98
4081 4506 5.362105 TCCTTTGTAGGGTGCGTTATTAT 57.638 39.130 0.00 0.00 42.26 1.28
4082 4507 5.747342 TCCTTTGTAGGGTGCGTTATTATT 58.253 37.500 0.00 0.00 42.26 1.40
4083 4508 6.181908 TCCTTTGTAGGGTGCGTTATTATTT 58.818 36.000 0.00 0.00 42.26 1.40
4084 4509 6.660094 TCCTTTGTAGGGTGCGTTATTATTTT 59.340 34.615 0.00 0.00 42.26 1.82
4085 4510 6.750039 CCTTTGTAGGGTGCGTTATTATTTTG 59.250 38.462 0.00 0.00 37.94 2.44
4086 4511 5.821516 TGTAGGGTGCGTTATTATTTTGG 57.178 39.130 0.00 0.00 0.00 3.28
4087 4512 4.641094 TGTAGGGTGCGTTATTATTTTGGG 59.359 41.667 0.00 0.00 0.00 4.12
4088 4513 2.429250 AGGGTGCGTTATTATTTTGGGC 59.571 45.455 0.00 0.00 0.00 5.36
4089 4514 2.429250 GGGTGCGTTATTATTTTGGGCT 59.571 45.455 0.00 0.00 0.00 5.19
4090 4515 3.633065 GGGTGCGTTATTATTTTGGGCTA 59.367 43.478 0.00 0.00 0.00 3.93
4091 4516 4.261447 GGGTGCGTTATTATTTTGGGCTAG 60.261 45.833 0.00 0.00 0.00 3.42
4092 4517 4.287720 GTGCGTTATTATTTTGGGCTAGC 58.712 43.478 6.04 6.04 0.00 3.42
4093 4518 3.316868 TGCGTTATTATTTTGGGCTAGCC 59.683 43.478 26.55 26.55 0.00 3.93
4105 4530 3.537874 CTAGCCCGTTAGCGCCCT 61.538 66.667 2.29 0.00 38.01 5.19
4106 4531 3.501458 CTAGCCCGTTAGCGCCCTC 62.501 68.421 2.29 0.00 38.01 4.30
4112 4537 4.525949 GTTAGCGCCCTCGGGGTC 62.526 72.222 2.29 0.00 46.51 4.46
4113 4538 4.772231 TTAGCGCCCTCGGGGTCT 62.772 66.667 2.29 5.93 46.51 3.85
4119 4544 4.444081 CCCTCGGGGTCTCTCGGT 62.444 72.222 0.00 0.00 38.25 4.69
4120 4545 2.362632 CCTCGGGGTCTCTCGGTT 60.363 66.667 0.00 0.00 0.00 4.44
4121 4546 2.416432 CCTCGGGGTCTCTCGGTTC 61.416 68.421 0.00 0.00 0.00 3.62
4122 4547 2.362120 TCGGGGTCTCTCGGTTCC 60.362 66.667 0.00 0.00 0.00 3.62
4123 4548 2.362632 CGGGGTCTCTCGGTTCCT 60.363 66.667 0.00 0.00 0.00 3.36
4124 4549 1.982938 CGGGGTCTCTCGGTTCCTT 60.983 63.158 0.00 0.00 0.00 3.36
4125 4550 1.542187 CGGGGTCTCTCGGTTCCTTT 61.542 60.000 0.00 0.00 0.00 3.11
4126 4551 0.691332 GGGGTCTCTCGGTTCCTTTT 59.309 55.000 0.00 0.00 0.00 2.27
4127 4552 1.338864 GGGGTCTCTCGGTTCCTTTTC 60.339 57.143 0.00 0.00 0.00 2.29
4128 4553 1.346722 GGGTCTCTCGGTTCCTTTTCA 59.653 52.381 0.00 0.00 0.00 2.69
4129 4554 2.027100 GGGTCTCTCGGTTCCTTTTCAT 60.027 50.000 0.00 0.00 0.00 2.57
4130 4555 3.559384 GGGTCTCTCGGTTCCTTTTCATT 60.559 47.826 0.00 0.00 0.00 2.57
4131 4556 4.072839 GGTCTCTCGGTTCCTTTTCATTT 58.927 43.478 0.00 0.00 0.00 2.32
4132 4557 4.154375 GGTCTCTCGGTTCCTTTTCATTTC 59.846 45.833 0.00 0.00 0.00 2.17
4133 4558 4.154375 GTCTCTCGGTTCCTTTTCATTTCC 59.846 45.833 0.00 0.00 0.00 3.13
4134 4559 3.418047 TCTCGGTTCCTTTTCATTTCCC 58.582 45.455 0.00 0.00 0.00 3.97
4135 4560 2.492088 CTCGGTTCCTTTTCATTTCCCC 59.508 50.000 0.00 0.00 0.00 4.81
4136 4561 1.548719 CGGTTCCTTTTCATTTCCCCC 59.451 52.381 0.00 0.00 0.00 5.40
4155 4580 5.974156 CCCCCAATTTTTCCCTATTTCAT 57.026 39.130 0.00 0.00 0.00 2.57
4156 4581 6.325993 CCCCCAATTTTTCCCTATTTCATT 57.674 37.500 0.00 0.00 0.00 2.57
4157 4582 6.730447 CCCCCAATTTTTCCCTATTTCATTT 58.270 36.000 0.00 0.00 0.00 2.32
4158 4583 7.181361 CCCCCAATTTTTCCCTATTTCATTTT 58.819 34.615 0.00 0.00 0.00 1.82
4159 4584 8.332487 CCCCCAATTTTTCCCTATTTCATTTTA 58.668 33.333 0.00 0.00 0.00 1.52
4160 4585 9.394767 CCCCAATTTTTCCCTATTTCATTTTAG 57.605 33.333 0.00 0.00 0.00 1.85
4161 4586 9.394767 CCCAATTTTTCCCTATTTCATTTTAGG 57.605 33.333 0.00 0.00 35.69 2.69
4162 4587 9.958180 CCAATTTTTCCCTATTTCATTTTAGGT 57.042 29.630 0.00 0.00 34.35 3.08
4164 4589 9.958180 AATTTTTCCCTATTTCATTTTAGGTGG 57.042 29.630 0.00 0.00 34.35 4.61
4165 4590 6.538945 TTTCCCTATTTCATTTTAGGTGGC 57.461 37.500 0.00 0.00 34.35 5.01
4166 4591 5.199982 TCCCTATTTCATTTTAGGTGGCA 57.800 39.130 0.00 0.00 34.35 4.92
4167 4592 5.776358 TCCCTATTTCATTTTAGGTGGCAT 58.224 37.500 0.00 0.00 34.35 4.40
4168 4593 6.201591 TCCCTATTTCATTTTAGGTGGCATT 58.798 36.000 0.00 0.00 34.35 3.56
4169 4594 6.098124 TCCCTATTTCATTTTAGGTGGCATTG 59.902 38.462 0.00 0.00 34.35 2.82
4170 4595 6.127083 CCCTATTTCATTTTAGGTGGCATTGT 60.127 38.462 0.00 0.00 34.35 2.71
4171 4596 7.330262 CCTATTTCATTTTAGGTGGCATTGTT 58.670 34.615 0.00 0.00 32.00 2.83
4172 4597 7.823799 CCTATTTCATTTTAGGTGGCATTGTTT 59.176 33.333 0.00 0.00 32.00 2.83
4173 4598 7.671495 ATTTCATTTTAGGTGGCATTGTTTC 57.329 32.000 0.00 0.00 0.00 2.78
4174 4599 4.804108 TCATTTTAGGTGGCATTGTTTCG 58.196 39.130 0.00 0.00 0.00 3.46
4175 4600 4.520874 TCATTTTAGGTGGCATTGTTTCGA 59.479 37.500 0.00 0.00 0.00 3.71
4176 4601 5.184864 TCATTTTAGGTGGCATTGTTTCGAT 59.815 36.000 0.00 0.00 0.00 3.59
4177 4602 4.433186 TTTAGGTGGCATTGTTTCGATG 57.567 40.909 0.00 0.00 0.00 3.84
4178 4603 2.198827 AGGTGGCATTGTTTCGATGA 57.801 45.000 0.00 0.00 0.00 2.92
4179 4604 2.086869 AGGTGGCATTGTTTCGATGAG 58.913 47.619 0.00 0.00 0.00 2.90
4180 4605 1.133025 GGTGGCATTGTTTCGATGAGG 59.867 52.381 0.00 0.00 0.00 3.86
4181 4606 0.810648 TGGCATTGTTTCGATGAGGC 59.189 50.000 1.65 0.00 0.00 4.70
4182 4607 0.810648 GGCATTGTTTCGATGAGGCA 59.189 50.000 1.65 0.00 0.00 4.75
4183 4608 1.202222 GGCATTGTTTCGATGAGGCAG 60.202 52.381 1.65 0.00 0.00 4.85
4184 4609 1.739466 GCATTGTTTCGATGAGGCAGA 59.261 47.619 1.65 0.00 0.00 4.26
4185 4610 2.223203 GCATTGTTTCGATGAGGCAGAG 60.223 50.000 1.65 0.00 0.00 3.35
4186 4611 2.099141 TTGTTTCGATGAGGCAGAGG 57.901 50.000 0.00 0.00 0.00 3.69
4187 4612 0.250234 TGTTTCGATGAGGCAGAGGG 59.750 55.000 0.00 0.00 0.00 4.30
4188 4613 0.462759 GTTTCGATGAGGCAGAGGGG 60.463 60.000 0.00 0.00 0.00 4.79
4189 4614 2.257409 TTTCGATGAGGCAGAGGGGC 62.257 60.000 0.00 0.00 43.80 5.80
4190 4615 3.473647 CGATGAGGCAGAGGGGCA 61.474 66.667 0.00 0.00 46.44 5.36
4191 4616 2.509916 GATGAGGCAGAGGGGCAG 59.490 66.667 0.00 0.00 46.44 4.85
4192 4617 2.041762 ATGAGGCAGAGGGGCAGA 59.958 61.111 0.00 0.00 46.44 4.26
4193 4618 2.042404 GATGAGGCAGAGGGGCAGAG 62.042 65.000 0.00 0.00 46.44 3.35
4194 4619 2.364842 GAGGCAGAGGGGCAGAGA 60.365 66.667 0.00 0.00 46.44 3.10
4195 4620 2.365370 AGGCAGAGGGGCAGAGAG 60.365 66.667 0.00 0.00 46.44 3.20
4196 4621 3.478274 GGCAGAGGGGCAGAGAGG 61.478 72.222 0.00 0.00 42.77 3.69
4197 4622 2.364842 GCAGAGGGGCAGAGAGGA 60.365 66.667 0.00 0.00 0.00 3.71
4198 4623 2.433994 GCAGAGGGGCAGAGAGGAG 61.434 68.421 0.00 0.00 0.00 3.69
4199 4624 1.761667 CAGAGGGGCAGAGAGGAGG 60.762 68.421 0.00 0.00 0.00 4.30
4200 4625 3.160748 GAGGGGCAGAGAGGAGGC 61.161 72.222 0.00 0.00 0.00 4.70
4204 4629 3.780173 GGCAGAGAGGAGGCGCTT 61.780 66.667 7.64 0.00 0.00 4.68
4205 4630 2.511145 GCAGAGAGGAGGCGCTTG 60.511 66.667 7.64 0.00 0.00 4.01
4206 4631 2.977178 CAGAGAGGAGGCGCTTGT 59.023 61.111 7.64 0.00 0.00 3.16
4207 4632 1.447489 CAGAGAGGAGGCGCTTGTG 60.447 63.158 7.64 0.00 0.00 3.33
4208 4633 2.817396 GAGAGGAGGCGCTTGTGC 60.817 66.667 7.64 0.00 0.00 4.57
4219 4644 4.680237 CTTGTGCGGCGGAGGACA 62.680 66.667 9.78 0.00 40.66 4.02
4220 4645 4.680237 TTGTGCGGCGGAGGACAG 62.680 66.667 9.78 0.00 43.10 3.51
4228 4653 2.765807 CGGAGGACAGGAGGCCAT 60.766 66.667 5.01 0.00 0.00 4.40
4229 4654 2.370445 CGGAGGACAGGAGGCCATT 61.370 63.158 5.01 0.00 0.00 3.16
4230 4655 1.529309 GGAGGACAGGAGGCCATTC 59.471 63.158 5.01 0.00 0.00 2.67
4231 4656 1.529309 GAGGACAGGAGGCCATTCC 59.471 63.158 5.01 3.66 37.52 3.01
4232 4657 2.190578 GGACAGGAGGCCATTCCG 59.809 66.667 5.01 3.46 42.29 4.30
4233 4658 2.670148 GGACAGGAGGCCATTCCGT 61.670 63.158 5.01 6.87 42.29 4.69
4234 4659 1.153349 GACAGGAGGCCATTCCGTC 60.153 63.158 5.01 12.14 42.29 4.79
4235 4660 2.202932 CAGGAGGCCATTCCGTCG 60.203 66.667 5.01 0.00 42.29 5.12
4236 4661 3.470888 AGGAGGCCATTCCGTCGG 61.471 66.667 5.01 4.39 42.29 4.79
4237 4662 4.547367 GGAGGCCATTCCGTCGGG 62.547 72.222 12.29 0.00 40.77 5.14
4238 4663 3.782443 GAGGCCATTCCGTCGGGT 61.782 66.667 12.29 0.00 40.77 5.28
4239 4664 3.325201 GAGGCCATTCCGTCGGGTT 62.325 63.158 12.29 0.00 40.77 4.11
4240 4665 2.822701 GGCCATTCCGTCGGGTTC 60.823 66.667 12.29 0.00 33.83 3.62
4241 4666 2.046700 GCCATTCCGTCGGGTTCA 60.047 61.111 12.29 0.00 33.83 3.18
4242 4667 1.451387 GCCATTCCGTCGGGTTCAT 60.451 57.895 12.29 0.00 33.83 2.57
4243 4668 1.714899 GCCATTCCGTCGGGTTCATG 61.715 60.000 12.29 8.76 33.83 3.07
4244 4669 1.095228 CCATTCCGTCGGGTTCATGG 61.095 60.000 12.29 13.65 33.29 3.66
4245 4670 1.451387 ATTCCGTCGGGTTCATGGC 60.451 57.895 12.29 0.00 33.83 4.40
4246 4671 3.943479 TTCCGTCGGGTTCATGGCG 62.943 63.158 12.29 0.00 33.83 5.69
4247 4672 4.752879 CCGTCGGGTTCATGGCGT 62.753 66.667 2.34 0.00 0.00 5.68
4248 4673 2.740826 CGTCGGGTTCATGGCGTT 60.741 61.111 0.00 0.00 0.00 4.84
4249 4674 2.322081 CGTCGGGTTCATGGCGTTT 61.322 57.895 0.00 0.00 0.00 3.60
4250 4675 1.500396 GTCGGGTTCATGGCGTTTC 59.500 57.895 0.00 0.00 0.00 2.78
4251 4676 1.673009 TCGGGTTCATGGCGTTTCC 60.673 57.895 0.00 0.00 0.00 3.13
4252 4677 2.874751 GGGTTCATGGCGTTTCCG 59.125 61.111 0.00 0.00 37.80 4.30
4253 4678 1.673009 GGGTTCATGGCGTTTCCGA 60.673 57.895 0.00 0.00 37.80 4.55
4254 4679 1.644786 GGGTTCATGGCGTTTCCGAG 61.645 60.000 0.00 0.00 37.80 4.63
4255 4680 1.134694 GTTCATGGCGTTTCCGAGC 59.865 57.895 0.00 0.00 37.80 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.922545 GTAACCGTCCCTTTTCGATCG 59.077 52.381 9.36 9.36 0.00 3.69
61 63 5.880901 TGCCTCCTAGAATTGTTCTTTCTT 58.119 37.500 0.00 0.00 41.14 2.52
63 65 6.558909 CATTGCCTCCTAGAATTGTTCTTTC 58.441 40.000 0.00 0.00 41.14 2.62
84 86 6.403866 TTTCACAAGACCATAAACTGCATT 57.596 33.333 0.00 0.00 0.00 3.56
156 158 5.877012 TCGAGGAATCTTTCAATGGAAGAAG 59.123 40.000 8.21 0.00 33.82 2.85
159 161 6.510799 CGAATCGAGGAATCTTTCAATGGAAG 60.511 42.308 0.00 0.00 33.82 3.46
165 167 4.566004 ACACGAATCGAGGAATCTTTCAA 58.434 39.130 10.55 0.00 0.00 2.69
167 169 6.642683 TTTACACGAATCGAGGAATCTTTC 57.357 37.500 10.55 0.00 0.00 2.62
180 182 8.357402 GGCCCTCATAATTTTATTTACACGAAT 58.643 33.333 0.00 0.00 0.00 3.34
198 200 0.779997 GAATACCATGGGGCCCTCAT 59.220 55.000 25.93 20.25 37.90 2.90
207 209 8.996024 TGTTACATCATATACGAATACCATGG 57.004 34.615 11.19 11.19 0.00 3.66
243 247 8.477256 TGAATTTTGAAGAGAGGTGAATTTTGT 58.523 29.630 0.00 0.00 0.00 2.83
276 281 6.417635 CAGCAAATGTTTGATACAAACGAGTT 59.582 34.615 18.09 11.97 40.89 3.01
300 305 9.581099 GTTTCTTGGTTTCTTTGTTAGAATTCA 57.419 29.630 8.44 0.00 42.32 2.57
314 319 9.797556 AACTGTAAAACTATGTTTCTTGGTTTC 57.202 29.630 0.00 0.00 31.07 2.78
319 324 9.155053 GTCGAAACTGTAAAACTATGTTTCTTG 57.845 33.333 12.79 2.12 42.20 3.02
330 335 4.033587 TGCAGTGAGTCGAAACTGTAAAAC 59.966 41.667 19.53 8.14 44.59 2.43
351 356 2.069273 AGCAACGACTACAATCAGTGC 58.931 47.619 0.00 0.00 0.00 4.40
373 378 5.407502 TCACATTCAGTTACGTAGACCATG 58.592 41.667 0.00 0.00 0.00 3.66
383 388 9.922305 GAAGTAGCATAAATCACATTCAGTTAC 57.078 33.333 0.00 0.00 0.00 2.50
403 415 6.428159 AGCAATACAAAGAACACCAGAAGTAG 59.572 38.462 0.00 0.00 0.00 2.57
412 424 6.149474 ACCTGTCATAGCAATACAAAGAACAC 59.851 38.462 0.00 0.00 0.00 3.32
424 436 1.822371 TCAGCGTACCTGTCATAGCAA 59.178 47.619 10.08 0.00 42.38 3.91
428 440 4.340950 TCATTCATCAGCGTACCTGTCATA 59.659 41.667 10.08 0.00 42.38 2.15
436 448 3.066369 TCGACTCATTCATCAGCGTAC 57.934 47.619 0.00 0.00 0.00 3.67
438 450 2.094494 ACTTCGACTCATTCATCAGCGT 60.094 45.455 0.00 0.00 0.00 5.07
439 451 2.534298 ACTTCGACTCATTCATCAGCG 58.466 47.619 0.00 0.00 0.00 5.18
440 452 4.935885 AAACTTCGACTCATTCATCAGC 57.064 40.909 0.00 0.00 0.00 4.26
481 494 5.419788 CCTCATGATTTGGAAGAATCAACCA 59.580 40.000 0.00 0.00 45.96 3.67
485 498 3.956199 GGCCTCATGATTTGGAAGAATCA 59.044 43.478 3.71 3.12 46.64 2.57
491 504 1.004161 TGTCGGCCTCATGATTTGGAA 59.996 47.619 0.00 0.00 0.00 3.53
495 508 2.498167 GCTATGTCGGCCTCATGATTT 58.502 47.619 16.96 0.00 0.00 2.17
580 593 5.491070 CTTCTCTTCTGTCTCTCTCTCTCA 58.509 45.833 0.00 0.00 0.00 3.27
600 621 2.559231 TGCCCACGGTAATTTTTCCTTC 59.441 45.455 0.00 0.00 0.00 3.46
609 630 1.190643 CCCAAAATGCCCACGGTAAT 58.809 50.000 0.00 0.00 0.00 1.89
637 658 1.746991 GCTCCACTACCCTGCTTGC 60.747 63.158 0.00 0.00 0.00 4.01
640 661 1.992277 CCAGCTCCACTACCCTGCT 60.992 63.158 0.00 0.00 0.00 4.24
772 804 2.163509 GAGGCAACCTTTCTTTCCTCC 58.836 52.381 0.00 0.00 35.32 4.30
776 808 2.163509 GGGAGAGGCAACCTTTCTTTC 58.836 52.381 4.38 0.00 35.41 2.62
793 825 1.580066 ATCAAATCCAAGGCGGGGGA 61.580 55.000 0.00 0.00 37.64 4.81
832 864 1.135170 GGTAGGGACAGAGCGTGTTAC 60.135 57.143 0.00 0.00 40.56 2.50
836 868 1.513158 CTGGTAGGGACAGAGCGTG 59.487 63.158 0.00 0.00 38.20 5.34
838 870 2.290122 CTGCTGGTAGGGACAGAGCG 62.290 65.000 0.00 0.00 38.20 5.03
839 871 1.519719 CTGCTGGTAGGGACAGAGC 59.480 63.158 0.00 0.00 38.20 4.09
840 872 0.975040 AGCTGCTGGTAGGGACAGAG 60.975 60.000 0.00 0.00 38.20 3.35
841 873 0.335019 TAGCTGCTGGTAGGGACAGA 59.665 55.000 13.43 0.00 38.20 3.41
842 874 0.749649 CTAGCTGCTGGTAGGGACAG 59.250 60.000 18.95 0.00 39.76 3.51
843 875 1.330655 GCTAGCTGCTGGTAGGGACA 61.331 60.000 25.24 0.00 42.66 4.02
844 876 1.330655 TGCTAGCTGCTGGTAGGGAC 61.331 60.000 25.24 13.14 42.66 4.46
845 877 1.001631 TGCTAGCTGCTGGTAGGGA 59.998 57.895 25.24 9.65 42.66 4.20
846 878 1.144936 GTGCTAGCTGCTGGTAGGG 59.855 63.158 25.24 8.00 42.66 3.53
890 925 2.872557 GCTGCTGCTGCGATTTCA 59.127 55.556 15.65 0.00 43.34 2.69
908 943 0.951040 ACTAAGCTGAGCACGTTGCC 60.951 55.000 7.39 0.64 46.52 4.52
928 972 9.284143 CTGAAAGAGATAGCACTGCTACTGCTA 62.284 44.444 13.08 11.39 43.49 3.49
939 983 4.808364 CCACTTAGCTGAAAGAGATAGCAC 59.192 45.833 3.21 0.00 39.84 4.40
960 1012 3.699134 TAGCGAGCGAGCTCTCCCA 62.699 63.158 20.97 3.63 45.67 4.37
1191 1251 3.437213 TCATCCAGGAACCTCGAGTTAA 58.563 45.455 12.31 0.00 39.40 2.01
1192 1252 3.095912 TCATCCAGGAACCTCGAGTTA 57.904 47.619 12.31 0.00 39.40 2.24
1193 1253 1.938585 TCATCCAGGAACCTCGAGTT 58.061 50.000 12.31 5.83 43.07 3.01
1194 1254 1.550976 GTTCATCCAGGAACCTCGAGT 59.449 52.381 12.31 0.00 40.97 4.18
1227 1287 8.657729 GCAGGACAAGAAAAATACTCTTAGTAC 58.342 37.037 0.00 0.00 32.84 2.73
1228 1288 8.594550 AGCAGGACAAGAAAAATACTCTTAGTA 58.405 33.333 0.00 0.00 34.82 1.82
1233 1293 6.120507 AGAGCAGGACAAGAAAAATACTCT 57.879 37.500 0.00 0.00 0.00 3.24
1234 1294 6.428159 TCAAGAGCAGGACAAGAAAAATACTC 59.572 38.462 0.00 0.00 0.00 2.59
1235 1295 6.299141 TCAAGAGCAGGACAAGAAAAATACT 58.701 36.000 0.00 0.00 0.00 2.12
1236 1296 6.560253 TCAAGAGCAGGACAAGAAAAATAC 57.440 37.500 0.00 0.00 0.00 1.89
1279 1341 8.394121 GTCAAGGAAGAACATAAAGCATTAGAG 58.606 37.037 0.00 0.00 0.00 2.43
1326 1388 3.427573 CGGGTTAATTGGAAAAGGAGGT 58.572 45.455 0.00 0.00 0.00 3.85
1366 1430 2.634982 TCAATCATTCGCAACTTGCC 57.365 45.000 8.20 0.00 41.12 4.52
1451 1518 1.079503 CCGGCTAGCTTTGTGAACTC 58.920 55.000 15.72 0.00 0.00 3.01
1500 1567 2.542597 GAACACACACAAGACCGTACA 58.457 47.619 0.00 0.00 0.00 2.90
1503 1570 0.108520 ACGAACACACACAAGACCGT 60.109 50.000 0.00 0.00 0.00 4.83
1504 1571 0.575390 GACGAACACACACAAGACCG 59.425 55.000 0.00 0.00 0.00 4.79
1505 1572 1.859080 GAGACGAACACACACAAGACC 59.141 52.381 0.00 0.00 0.00 3.85
1506 1573 2.810650 AGAGACGAACACACACAAGAC 58.189 47.619 0.00 0.00 0.00 3.01
1507 1574 3.130516 AGAAGAGACGAACACACACAAGA 59.869 43.478 0.00 0.00 0.00 3.02
1508 1575 3.448686 AGAAGAGACGAACACACACAAG 58.551 45.455 0.00 0.00 0.00 3.16
1509 1576 3.520290 AGAAGAGACGAACACACACAA 57.480 42.857 0.00 0.00 0.00 3.33
1510 1577 3.186909 CAAGAAGAGACGAACACACACA 58.813 45.455 0.00 0.00 0.00 3.72
1532 1599 4.098654 AGTTCATCACCATCTTCGTCCTAG 59.901 45.833 0.00 0.00 0.00 3.02
1546 1613 4.096682 AGAGAGCGTTAGGTAGTTCATCAC 59.903 45.833 0.00 0.00 0.00 3.06
1550 1617 4.521639 TGAAAGAGAGCGTTAGGTAGTTCA 59.478 41.667 0.00 0.00 0.00 3.18
1551 1618 4.858140 GTGAAAGAGAGCGTTAGGTAGTTC 59.142 45.833 0.00 0.00 0.00 3.01
1552 1619 4.523558 AGTGAAAGAGAGCGTTAGGTAGTT 59.476 41.667 0.00 0.00 0.00 2.24
1577 1648 5.452078 TTCTCCAAGAAATTTCAATGCGT 57.548 34.783 19.99 0.00 29.99 5.24
1603 1674 1.136252 CATCAAAGGAACGCACTGACG 60.136 52.381 0.00 0.00 39.50 4.35
1622 1693 9.850628 GTTGAAGAATTGATGATTGAAATCTCA 57.149 29.630 4.76 3.66 36.39 3.27
1629 1700 9.506018 TTGTAGAGTTGAAGAATTGATGATTGA 57.494 29.630 0.00 0.00 0.00 2.57
1655 1727 3.662247 ACTTACGTGCAAGCTAGTTCT 57.338 42.857 0.00 0.00 0.00 3.01
1680 1752 5.598830 TGTAAAGCAGAGCTAGCTAATAGGT 59.401 40.000 19.38 10.43 44.92 3.08
1733 1807 4.285517 AGGAATCAGGACCAGCACTATATG 59.714 45.833 0.00 0.00 0.00 1.78
1739 1813 0.615331 TCAGGAATCAGGACCAGCAC 59.385 55.000 0.00 0.00 0.00 4.40
1781 1858 1.037579 GTAGCCCATGGAACTTGCCC 61.038 60.000 15.22 0.00 0.00 5.36
1887 1964 6.053005 GGCCATGCTACACTTAGTTTATACA 58.947 40.000 0.00 0.00 0.00 2.29
1888 1965 6.289064 AGGCCATGCTACACTTAGTTTATAC 58.711 40.000 5.01 0.00 0.00 1.47
1889 1966 6.494666 AGGCCATGCTACACTTAGTTTATA 57.505 37.500 5.01 0.00 0.00 0.98
1890 1967 5.373812 AGGCCATGCTACACTTAGTTTAT 57.626 39.130 5.01 0.00 0.00 1.40
1914 1991 3.760151 CGGGATGTATAGTCCGTCCATTA 59.240 47.826 0.00 0.00 39.36 1.90
1915 1992 2.561419 CGGGATGTATAGTCCGTCCATT 59.439 50.000 0.00 0.00 39.36 3.16
1921 1998 4.008330 ACATAGACGGGATGTATAGTCCG 58.992 47.826 0.00 0.00 46.95 4.79
2007 2165 9.939424 ACTCTTATATTAGTTTACAGAGGGAGT 57.061 33.333 0.00 0.00 32.21 3.85
2043 2201 7.393841 AGAGCGTTTAGATCACTACTTTAGT 57.606 36.000 0.00 0.00 37.82 2.24
2044 2202 9.953697 ATAAGAGCGTTTAGATCACTACTTTAG 57.046 33.333 0.00 0.00 37.82 1.85
2056 2214 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
2057 2215 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
2058 2216 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
2059 2217 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
2060 2218 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
2061 2219 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
2062 2220 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
2063 2221 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
2064 2222 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2065 2223 9.512588 CTACTCCCTCCGTAAACTAATATAAGA 57.487 37.037 0.00 0.00 0.00 2.10
2066 2224 9.294614 ACTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
2067 2225 9.646522 AACTACTCCCTCCGTAAACTAATATAA 57.353 33.333 0.00 0.00 0.00 0.98
2069 2227 9.646522 TTAACTACTCCCTCCGTAAACTAATAT 57.353 33.333 0.00 0.00 0.00 1.28
2070 2228 9.646522 ATTAACTACTCCCTCCGTAAACTAATA 57.353 33.333 0.00 0.00 0.00 0.98
2071 2229 7.961326 TTAACTACTCCCTCCGTAAACTAAT 57.039 36.000 0.00 0.00 0.00 1.73
2072 2230 7.961326 ATTAACTACTCCCTCCGTAAACTAA 57.039 36.000 0.00 0.00 0.00 2.24
2073 2231 7.615365 TCAATTAACTACTCCCTCCGTAAACTA 59.385 37.037 0.00 0.00 0.00 2.24
2074 2232 6.438425 TCAATTAACTACTCCCTCCGTAAACT 59.562 38.462 0.00 0.00 0.00 2.66
2075 2233 6.533012 GTCAATTAACTACTCCCTCCGTAAAC 59.467 42.308 0.00 0.00 0.00 2.01
2076 2234 6.625740 CGTCAATTAACTACTCCCTCCGTAAA 60.626 42.308 0.00 0.00 0.00 2.01
2077 2235 5.163622 CGTCAATTAACTACTCCCTCCGTAA 60.164 44.000 0.00 0.00 0.00 3.18
2078 2236 4.336433 CGTCAATTAACTACTCCCTCCGTA 59.664 45.833 0.00 0.00 0.00 4.02
2079 2237 3.129988 CGTCAATTAACTACTCCCTCCGT 59.870 47.826 0.00 0.00 0.00 4.69
2080 2238 3.129988 ACGTCAATTAACTACTCCCTCCG 59.870 47.826 0.00 0.00 0.00 4.63
2081 2239 4.732672 ACGTCAATTAACTACTCCCTCC 57.267 45.455 0.00 0.00 0.00 4.30
2082 2240 7.035840 TCATACGTCAATTAACTACTCCCTC 57.964 40.000 0.00 0.00 0.00 4.30
2083 2241 7.414222 TTCATACGTCAATTAACTACTCCCT 57.586 36.000 0.00 0.00 0.00 4.20
2084 2242 8.483307 TTTTCATACGTCAATTAACTACTCCC 57.517 34.615 0.00 0.00 0.00 4.30
2216 2383 0.882042 GCCGCTAGTGCTGTGCATAT 60.882 55.000 0.00 0.00 41.91 1.78
2217 2384 1.521457 GCCGCTAGTGCTGTGCATA 60.521 57.895 0.00 0.00 41.91 3.14
2218 2385 2.821366 GCCGCTAGTGCTGTGCAT 60.821 61.111 0.00 0.00 41.91 3.96
2273 2440 9.759473 AGAAAGATATATTTCCACATATTGGGG 57.241 33.333 17.13 0.00 46.92 4.96
2284 2459 5.014649 AGCCCAGGGAGAAAGATATATTTCC 59.985 44.000 17.13 9.94 39.53 3.13
2329 2506 4.730949 ACTGAATTCATCCCTTTGCATG 57.269 40.909 8.96 0.00 0.00 4.06
2331 2508 7.118723 AGTAATACTGAATTCATCCCTTTGCA 58.881 34.615 8.96 0.00 0.00 4.08
2332 2509 7.573968 AGTAATACTGAATTCATCCCTTTGC 57.426 36.000 8.96 3.27 0.00 3.68
2450 2635 6.213677 ACCACATGTGCAATACTATACTACG 58.786 40.000 20.81 3.36 0.00 3.51
2451 2636 9.706691 ATTACCACATGTGCAATACTATACTAC 57.293 33.333 20.81 0.00 0.00 2.73
2452 2637 9.923143 GATTACCACATGTGCAATACTATACTA 57.077 33.333 20.81 0.00 0.00 1.82
2453 2638 8.651389 AGATTACCACATGTGCAATACTATACT 58.349 33.333 20.81 10.19 0.00 2.12
2462 2650 6.179756 AGTGATTAGATTACCACATGTGCAA 58.820 36.000 20.81 15.74 32.35 4.08
2492 2680 1.880819 GAGAAACGTACTCGGGGGCA 61.881 60.000 6.87 0.00 41.85 5.36
2503 2691 3.066621 TGCAAAGCTCAAATGAGAAACGT 59.933 39.130 14.43 0.00 44.74 3.99
2541 2729 3.892918 CAACTCTTGCCACTTCTCTTG 57.107 47.619 0.00 0.00 0.00 3.02
2715 2941 3.584834 TGAATTTCAGCTCGATCGTTCA 58.415 40.909 15.94 11.76 0.00 3.18
2729 2955 6.049263 AGAAGAAACGTGACACTGAATTTC 57.951 37.500 3.68 8.30 0.00 2.17
2871 3097 2.125552 CGCTGCATCAGGAACCGA 60.126 61.111 0.00 0.00 31.21 4.69
2908 3137 1.792118 TTCTGTTGCTGCTGCTGCTG 61.792 55.000 27.67 16.73 40.48 4.41
2909 3138 1.516365 CTTCTGTTGCTGCTGCTGCT 61.516 55.000 27.67 0.00 40.48 4.24
2910 3139 1.081376 CTTCTGTTGCTGCTGCTGC 60.081 57.895 22.51 22.51 40.48 5.25
2911 3140 1.081376 GCTTCTGTTGCTGCTGCTG 60.081 57.895 17.00 0.77 40.48 4.41
2912 3141 1.228184 AGCTTCTGTTGCTGCTGCT 60.228 52.632 17.00 0.00 39.56 4.24
2913 3142 3.352524 AGCTTCTGTTGCTGCTGC 58.647 55.556 8.89 8.89 39.56 5.25
2934 3163 3.185203 TCCTTGCCCTGCCCAAGT 61.185 61.111 0.00 0.00 38.36 3.16
2975 3204 4.495939 CGTCGACGTCGTCCTCGG 62.496 72.222 34.40 14.51 40.80 4.63
2977 3206 1.621301 TTCTCGTCGACGTCGTCCTC 61.621 60.000 34.40 21.65 40.80 3.71
2978 3207 1.624865 CTTCTCGTCGACGTCGTCCT 61.625 60.000 34.40 0.00 40.80 3.85
2997 3226 2.171725 GCCTACGTTGCCGGTCATC 61.172 63.158 1.90 0.00 38.78 2.92
3072 3301 1.303643 GGGGCACAGGAAGTCCAAG 60.304 63.158 0.00 0.00 38.89 3.61
3073 3302 1.434513 ATGGGGCACAGGAAGTCCAA 61.435 55.000 0.00 0.00 38.89 3.53
3289 3521 7.686859 GCAACTTCTTAATGGGGTCTTCTTTTT 60.687 37.037 0.00 0.00 0.00 1.94
3295 3527 4.112634 TGCAACTTCTTAATGGGGTCTT 57.887 40.909 0.00 0.00 0.00 3.01
3426 3658 0.304705 CAACGTGTCACCAACTGAGC 59.695 55.000 0.00 0.00 0.00 4.26
3455 3687 0.321671 TTCCCCTCGAGAAAGTGCAG 59.678 55.000 15.71 0.00 0.00 4.41
3514 3746 1.255667 TAGGCACCGGTCAGGAAGAC 61.256 60.000 2.59 0.00 46.83 3.01
3523 3755 0.614979 ATGTCTGAGTAGGCACCGGT 60.615 55.000 0.00 0.00 42.19 5.28
3526 3758 1.137872 CCTGATGTCTGAGTAGGCACC 59.862 57.143 0.00 0.00 42.19 5.01
3538 3770 1.201429 ACACCCCTGTCCCTGATGTC 61.201 60.000 0.00 0.00 0.00 3.06
3551 3783 3.133901 AGAAACCAATTTCAACACACCCC 59.866 43.478 2.86 0.00 45.78 4.95
3689 3921 4.392138 GGCTAGTCCTGACATGTGTTAAAC 59.608 45.833 1.15 0.00 0.00 2.01
3701 3933 3.130734 ACCATTAAGGGCTAGTCCTGA 57.869 47.619 18.80 6.47 43.89 3.86
3709 3941 5.823861 ATGAAAACAAACCATTAAGGGCT 57.176 34.783 5.96 0.00 43.89 5.19
3710 3942 6.930731 TCTATGAAAACAAACCATTAAGGGC 58.069 36.000 5.96 0.00 43.89 5.19
3717 3949 7.926018 GGTGTTTCTTCTATGAAAACAAACCAT 59.074 33.333 1.84 0.00 37.63 3.55
3724 4141 6.295039 TCACGGTGTTTCTTCTATGAAAAC 57.705 37.500 8.17 0.00 37.63 2.43
3806 4231 2.531927 ATTGCATGCTCACGGCGTTG 62.532 55.000 20.33 7.12 45.43 4.10
3820 4245 1.072806 AGTCCTGAACTCAGCATTGCA 59.927 47.619 11.91 0.00 42.47 4.08
3821 4246 1.818642 AGTCCTGAACTCAGCATTGC 58.181 50.000 0.00 0.00 42.47 3.56
3918 4343 1.539827 ACCATGCGAAGTAGCCAAAAC 59.460 47.619 0.00 0.00 36.02 2.43
3947 4372 5.077424 GTCGACTGTAAAATAGCAAAACCG 58.923 41.667 8.70 0.00 0.00 4.44
3948 4373 6.077838 CAGTCGACTGTAAAATAGCAAAACC 58.922 40.000 32.77 0.00 39.09 3.27
3961 4386 7.933617 CAACGAATTGAAAAACAGTCGACTGTA 60.934 37.037 42.44 29.52 46.26 2.74
3963 4388 5.169561 CAACGAATTGAAAAACAGTCGACTG 59.830 40.000 37.50 37.50 42.90 3.51
3964 4389 5.163794 ACAACGAATTGAAAAACAGTCGACT 60.164 36.000 13.58 13.58 38.94 4.18
3965 4390 5.025826 ACAACGAATTGAAAAACAGTCGAC 58.974 37.500 7.70 7.70 38.94 4.20
3966 4391 5.163844 TGACAACGAATTGAAAAACAGTCGA 60.164 36.000 0.00 0.00 38.94 4.20
3967 4392 5.025190 TGACAACGAATTGAAAAACAGTCG 58.975 37.500 0.00 0.00 40.88 4.18
3968 4393 7.219917 TGAATGACAACGAATTGAAAAACAGTC 59.780 33.333 0.00 0.00 39.30 3.51
3969 4394 7.032580 TGAATGACAACGAATTGAAAAACAGT 58.967 30.769 0.00 0.00 39.30 3.55
3970 4395 7.448588 TGAATGACAACGAATTGAAAAACAG 57.551 32.000 0.00 0.00 39.30 3.16
3971 4396 7.818493 TTGAATGACAACGAATTGAAAAACA 57.182 28.000 0.00 0.00 39.30 2.83
3972 4397 9.701355 AAATTGAATGACAACGAATTGAAAAAC 57.299 25.926 0.00 0.00 41.52 2.43
3973 4398 9.913451 GAAATTGAATGACAACGAATTGAAAAA 57.087 25.926 0.00 0.00 41.52 1.94
3974 4399 9.311916 AGAAATTGAATGACAACGAATTGAAAA 57.688 25.926 0.00 0.00 41.52 2.29
3975 4400 8.870160 AGAAATTGAATGACAACGAATTGAAA 57.130 26.923 0.00 0.00 41.52 2.69
3976 4401 8.754096 CAAGAAATTGAATGACAACGAATTGAA 58.246 29.630 0.00 0.00 41.52 2.69
3977 4402 7.920151 ACAAGAAATTGAATGACAACGAATTGA 59.080 29.630 0.00 0.00 41.52 2.57
3978 4403 8.064447 ACAAGAAATTGAATGACAACGAATTG 57.936 30.769 0.00 0.00 41.52 2.32
3979 4404 7.382218 GGACAAGAAATTGAATGACAACGAATT 59.618 33.333 0.00 0.00 41.52 2.17
3980 4405 6.863126 GGACAAGAAATTGAATGACAACGAAT 59.137 34.615 0.00 0.00 41.52 3.34
3981 4406 6.205784 GGACAAGAAATTGAATGACAACGAA 58.794 36.000 0.00 0.00 41.52 3.85
3982 4407 5.559991 CGGACAAGAAATTGAATGACAACGA 60.560 40.000 0.00 0.00 41.52 3.85
3983 4408 4.612614 CGGACAAGAAATTGAATGACAACG 59.387 41.667 0.00 0.00 41.52 4.10
3984 4409 5.519722 ACGGACAAGAAATTGAATGACAAC 58.480 37.500 0.00 0.00 41.52 3.32
3985 4410 5.530915 AGACGGACAAGAAATTGAATGACAA 59.469 36.000 0.00 0.00 42.95 3.18
3986 4411 5.049474 CAGACGGACAAGAAATTGAATGACA 60.049 40.000 0.00 0.00 0.00 3.58
3987 4412 5.179368 TCAGACGGACAAGAAATTGAATGAC 59.821 40.000 0.00 0.00 0.00 3.06
3988 4413 5.304778 TCAGACGGACAAGAAATTGAATGA 58.695 37.500 0.00 0.00 0.00 2.57
3989 4414 5.611796 TCAGACGGACAAGAAATTGAATG 57.388 39.130 0.00 0.00 0.00 2.67
3990 4415 6.176183 AGATCAGACGGACAAGAAATTGAAT 58.824 36.000 0.00 0.00 0.00 2.57
3991 4416 5.551233 AGATCAGACGGACAAGAAATTGAA 58.449 37.500 0.00 0.00 0.00 2.69
3992 4417 5.152623 AGATCAGACGGACAAGAAATTGA 57.847 39.130 0.00 0.00 0.00 2.57
3993 4418 4.032217 CGAGATCAGACGGACAAGAAATTG 59.968 45.833 0.00 0.00 0.00 2.32
3994 4419 4.177026 CGAGATCAGACGGACAAGAAATT 58.823 43.478 0.00 0.00 0.00 1.82
3995 4420 3.775202 CGAGATCAGACGGACAAGAAAT 58.225 45.455 0.00 0.00 0.00 2.17
3996 4421 2.671351 GCGAGATCAGACGGACAAGAAA 60.671 50.000 0.00 0.00 0.00 2.52
3997 4422 1.135373 GCGAGATCAGACGGACAAGAA 60.135 52.381 0.00 0.00 0.00 2.52
3998 4423 0.452184 GCGAGATCAGACGGACAAGA 59.548 55.000 0.00 0.00 0.00 3.02
3999 4424 0.171231 TGCGAGATCAGACGGACAAG 59.829 55.000 0.00 0.00 0.00 3.16
4000 4425 0.109272 GTGCGAGATCAGACGGACAA 60.109 55.000 19.66 0.00 46.59 3.18
4001 4426 1.506718 GTGCGAGATCAGACGGACA 59.493 57.895 19.66 5.46 46.59 4.02
4002 4427 4.386245 GTGCGAGATCAGACGGAC 57.614 61.111 13.21 13.21 42.46 4.79
4003 4428 1.671328 CTTAGTGCGAGATCAGACGGA 59.329 52.381 0.00 0.00 0.00 4.69
4004 4429 1.671328 TCTTAGTGCGAGATCAGACGG 59.329 52.381 0.00 0.00 0.00 4.79
4005 4430 3.617540 ATCTTAGTGCGAGATCAGACG 57.382 47.619 0.00 0.00 0.00 4.18
4006 4431 4.737765 GTGAATCTTAGTGCGAGATCAGAC 59.262 45.833 0.00 0.00 32.86 3.51
4007 4432 4.496507 CGTGAATCTTAGTGCGAGATCAGA 60.497 45.833 0.00 0.00 32.86 3.27
4008 4433 3.728221 CGTGAATCTTAGTGCGAGATCAG 59.272 47.826 0.00 0.00 32.86 2.90
4009 4434 3.695816 CGTGAATCTTAGTGCGAGATCA 58.304 45.455 0.00 0.00 32.86 2.92
4010 4435 2.469516 GCGTGAATCTTAGTGCGAGATC 59.530 50.000 0.00 0.00 32.86 2.75
4011 4436 2.099921 AGCGTGAATCTTAGTGCGAGAT 59.900 45.455 0.00 0.00 35.43 2.75
4012 4437 1.472878 AGCGTGAATCTTAGTGCGAGA 59.527 47.619 0.00 0.00 0.00 4.04
4013 4438 1.585668 CAGCGTGAATCTTAGTGCGAG 59.414 52.381 0.00 0.00 0.00 5.03
4014 4439 1.201414 TCAGCGTGAATCTTAGTGCGA 59.799 47.619 0.00 0.00 0.00 5.10
4015 4440 1.585668 CTCAGCGTGAATCTTAGTGCG 59.414 52.381 0.00 0.00 0.00 5.34
4016 4441 2.881074 TCTCAGCGTGAATCTTAGTGC 58.119 47.619 0.00 0.00 0.00 4.40
4017 4442 4.489810 AGTTCTCAGCGTGAATCTTAGTG 58.510 43.478 0.00 0.00 0.00 2.74
4018 4443 4.461081 AGAGTTCTCAGCGTGAATCTTAGT 59.539 41.667 2.64 0.00 0.00 2.24
4019 4444 4.797868 CAGAGTTCTCAGCGTGAATCTTAG 59.202 45.833 2.64 0.00 0.00 2.18
4020 4445 4.459337 TCAGAGTTCTCAGCGTGAATCTTA 59.541 41.667 2.64 0.00 0.00 2.10
4021 4446 3.256879 TCAGAGTTCTCAGCGTGAATCTT 59.743 43.478 2.64 0.00 0.00 2.40
4022 4447 2.822561 TCAGAGTTCTCAGCGTGAATCT 59.177 45.455 2.64 0.00 0.00 2.40
4023 4448 3.223423 TCAGAGTTCTCAGCGTGAATC 57.777 47.619 2.64 0.00 0.00 2.52
4024 4449 3.883830 ATCAGAGTTCTCAGCGTGAAT 57.116 42.857 2.64 0.00 0.00 2.57
4025 4450 3.667497 AATCAGAGTTCTCAGCGTGAA 57.333 42.857 2.64 0.00 0.00 3.18
4026 4451 3.667497 AAATCAGAGTTCTCAGCGTGA 57.333 42.857 2.64 0.00 0.00 4.35
4027 4452 3.742882 TGAAAATCAGAGTTCTCAGCGTG 59.257 43.478 2.64 0.00 0.00 5.34
4028 4453 3.995199 TGAAAATCAGAGTTCTCAGCGT 58.005 40.909 2.64 0.00 0.00 5.07
4040 4465 1.200020 GAACCCACGCCTGAAAATCAG 59.800 52.381 0.32 0.32 43.91 2.90
4041 4466 1.243902 GAACCCACGCCTGAAAATCA 58.756 50.000 0.00 0.00 0.00 2.57
4042 4467 0.526211 GGAACCCACGCCTGAAAATC 59.474 55.000 0.00 0.00 0.00 2.17
4043 4468 0.112412 AGGAACCCACGCCTGAAAAT 59.888 50.000 0.00 0.00 32.06 1.82
4044 4469 0.106419 AAGGAACCCACGCCTGAAAA 60.106 50.000 0.00 0.00 34.00 2.29
4045 4470 0.106419 AAAGGAACCCACGCCTGAAA 60.106 50.000 0.00 0.00 34.00 2.69
4046 4471 0.821711 CAAAGGAACCCACGCCTGAA 60.822 55.000 0.00 0.00 34.00 3.02
4047 4472 1.228124 CAAAGGAACCCACGCCTGA 60.228 57.895 0.00 0.00 34.00 3.86
4048 4473 0.250553 TACAAAGGAACCCACGCCTG 60.251 55.000 0.00 0.00 34.00 4.85
4049 4474 0.036306 CTACAAAGGAACCCACGCCT 59.964 55.000 0.00 0.00 35.61 5.52
4050 4475 2.551644 CTACAAAGGAACCCACGCC 58.448 57.895 0.00 0.00 0.00 5.68
4060 4485 6.445357 AAATAATAACGCACCCTACAAAGG 57.555 37.500 0.00 0.00 43.25 3.11
4061 4486 6.750039 CCAAAATAATAACGCACCCTACAAAG 59.250 38.462 0.00 0.00 0.00 2.77
4062 4487 6.350277 CCCAAAATAATAACGCACCCTACAAA 60.350 38.462 0.00 0.00 0.00 2.83
4063 4488 5.125739 CCCAAAATAATAACGCACCCTACAA 59.874 40.000 0.00 0.00 0.00 2.41
4064 4489 4.641094 CCCAAAATAATAACGCACCCTACA 59.359 41.667 0.00 0.00 0.00 2.74
4065 4490 4.498513 GCCCAAAATAATAACGCACCCTAC 60.499 45.833 0.00 0.00 0.00 3.18
4066 4491 3.633065 GCCCAAAATAATAACGCACCCTA 59.367 43.478 0.00 0.00 0.00 3.53
4067 4492 2.429250 GCCCAAAATAATAACGCACCCT 59.571 45.455 0.00 0.00 0.00 4.34
4068 4493 2.429250 AGCCCAAAATAATAACGCACCC 59.571 45.455 0.00 0.00 0.00 4.61
4069 4494 3.793797 AGCCCAAAATAATAACGCACC 57.206 42.857 0.00 0.00 0.00 5.01
4070 4495 4.287720 GCTAGCCCAAAATAATAACGCAC 58.712 43.478 2.29 0.00 0.00 5.34
4071 4496 3.316868 GGCTAGCCCAAAATAATAACGCA 59.683 43.478 24.19 0.00 0.00 5.24
4072 4497 3.897325 GGCTAGCCCAAAATAATAACGC 58.103 45.455 24.19 0.00 0.00 4.84
4103 4528 2.362632 AACCGAGAGACCCCGAGG 60.363 66.667 0.00 0.00 40.04 4.63
4104 4529 2.416432 GGAACCGAGAGACCCCGAG 61.416 68.421 0.00 0.00 0.00 4.63
4105 4530 2.362120 GGAACCGAGAGACCCCGA 60.362 66.667 0.00 0.00 0.00 5.14
4106 4531 1.542187 AAAGGAACCGAGAGACCCCG 61.542 60.000 0.00 0.00 0.00 5.73
4107 4532 0.691332 AAAAGGAACCGAGAGACCCC 59.309 55.000 0.00 0.00 0.00 4.95
4108 4533 1.346722 TGAAAAGGAACCGAGAGACCC 59.653 52.381 0.00 0.00 0.00 4.46
4109 4534 2.833631 TGAAAAGGAACCGAGAGACC 57.166 50.000 0.00 0.00 0.00 3.85
4110 4535 4.154375 GGAAATGAAAAGGAACCGAGAGAC 59.846 45.833 0.00 0.00 0.00 3.36
4111 4536 4.324267 GGAAATGAAAAGGAACCGAGAGA 58.676 43.478 0.00 0.00 0.00 3.10
4112 4537 3.440522 GGGAAATGAAAAGGAACCGAGAG 59.559 47.826 0.00 0.00 0.00 3.20
4113 4538 3.418047 GGGAAATGAAAAGGAACCGAGA 58.582 45.455 0.00 0.00 0.00 4.04
4114 4539 2.492088 GGGGAAATGAAAAGGAACCGAG 59.508 50.000 0.00 0.00 0.00 4.63
4115 4540 2.521126 GGGGAAATGAAAAGGAACCGA 58.479 47.619 0.00 0.00 0.00 4.69
4116 4541 1.548719 GGGGGAAATGAAAAGGAACCG 59.451 52.381 0.00 0.00 0.00 4.44
4133 4558 5.974156 ATGAAATAGGGAAAAATTGGGGG 57.026 39.130 0.00 0.00 0.00 5.40
4134 4559 9.394767 CTAAAATGAAATAGGGAAAAATTGGGG 57.605 33.333 0.00 0.00 0.00 4.96
4135 4560 9.394767 CCTAAAATGAAATAGGGAAAAATTGGG 57.605 33.333 0.00 0.00 35.95 4.12
4136 4561 9.958180 ACCTAAAATGAAATAGGGAAAAATTGG 57.042 29.630 4.06 0.00 42.51 3.16
4138 4563 9.958180 CCACCTAAAATGAAATAGGGAAAAATT 57.042 29.630 4.06 0.00 42.51 1.82
4139 4564 8.046708 GCCACCTAAAATGAAATAGGGAAAAAT 58.953 33.333 4.06 0.00 42.51 1.82
4140 4565 7.016661 TGCCACCTAAAATGAAATAGGGAAAAA 59.983 33.333 4.06 0.00 42.51 1.94
4141 4566 6.498651 TGCCACCTAAAATGAAATAGGGAAAA 59.501 34.615 4.06 0.00 42.51 2.29
4142 4567 6.019748 TGCCACCTAAAATGAAATAGGGAAA 58.980 36.000 4.06 0.00 42.51 3.13
4143 4568 5.584913 TGCCACCTAAAATGAAATAGGGAA 58.415 37.500 4.06 0.00 42.51 3.97
4144 4569 5.199982 TGCCACCTAAAATGAAATAGGGA 57.800 39.130 4.06 0.00 42.51 4.20
4145 4570 6.127083 ACAATGCCACCTAAAATGAAATAGGG 60.127 38.462 4.06 0.00 42.51 3.53
4146 4571 6.877236 ACAATGCCACCTAAAATGAAATAGG 58.123 36.000 0.00 0.00 43.59 2.57
4147 4572 8.776376 AAACAATGCCACCTAAAATGAAATAG 57.224 30.769 0.00 0.00 0.00 1.73
4148 4573 7.543868 CGAAACAATGCCACCTAAAATGAAATA 59.456 33.333 0.00 0.00 0.00 1.40
4149 4574 6.368516 CGAAACAATGCCACCTAAAATGAAAT 59.631 34.615 0.00 0.00 0.00 2.17
4150 4575 5.694006 CGAAACAATGCCACCTAAAATGAAA 59.306 36.000 0.00 0.00 0.00 2.69
4151 4576 5.010112 TCGAAACAATGCCACCTAAAATGAA 59.990 36.000 0.00 0.00 0.00 2.57
4152 4577 4.520874 TCGAAACAATGCCACCTAAAATGA 59.479 37.500 0.00 0.00 0.00 2.57
4153 4578 4.804108 TCGAAACAATGCCACCTAAAATG 58.196 39.130 0.00 0.00 0.00 2.32
4154 4579 5.184864 TCATCGAAACAATGCCACCTAAAAT 59.815 36.000 0.00 0.00 0.00 1.82
4155 4580 4.520874 TCATCGAAACAATGCCACCTAAAA 59.479 37.500 0.00 0.00 0.00 1.52
4156 4581 4.075682 TCATCGAAACAATGCCACCTAAA 58.924 39.130 0.00 0.00 0.00 1.85
4157 4582 3.680490 TCATCGAAACAATGCCACCTAA 58.320 40.909 0.00 0.00 0.00 2.69
4158 4583 3.270027 CTCATCGAAACAATGCCACCTA 58.730 45.455 0.00 0.00 0.00 3.08
4159 4584 2.086869 CTCATCGAAACAATGCCACCT 58.913 47.619 0.00 0.00 0.00 4.00
4160 4585 1.133025 CCTCATCGAAACAATGCCACC 59.867 52.381 0.00 0.00 0.00 4.61
4161 4586 1.468054 GCCTCATCGAAACAATGCCAC 60.468 52.381 0.00 0.00 0.00 5.01
4162 4587 0.810648 GCCTCATCGAAACAATGCCA 59.189 50.000 0.00 0.00 0.00 4.92
4163 4588 0.810648 TGCCTCATCGAAACAATGCC 59.189 50.000 0.00 0.00 0.00 4.40
4164 4589 1.739466 TCTGCCTCATCGAAACAATGC 59.261 47.619 0.00 0.00 0.00 3.56
4165 4590 2.353889 CCTCTGCCTCATCGAAACAATG 59.646 50.000 0.00 0.00 0.00 2.82
4166 4591 2.636830 CCTCTGCCTCATCGAAACAAT 58.363 47.619 0.00 0.00 0.00 2.71
4167 4592 1.339055 CCCTCTGCCTCATCGAAACAA 60.339 52.381 0.00 0.00 0.00 2.83
4168 4593 0.250234 CCCTCTGCCTCATCGAAACA 59.750 55.000 0.00 0.00 0.00 2.83
4169 4594 0.462759 CCCCTCTGCCTCATCGAAAC 60.463 60.000 0.00 0.00 0.00 2.78
4170 4595 1.907739 CCCCTCTGCCTCATCGAAA 59.092 57.895 0.00 0.00 0.00 3.46
4171 4596 2.735772 GCCCCTCTGCCTCATCGAA 61.736 63.158 0.00 0.00 0.00 3.71
4172 4597 3.157252 GCCCCTCTGCCTCATCGA 61.157 66.667 0.00 0.00 0.00 3.59
4173 4598 3.457625 CTGCCCCTCTGCCTCATCG 62.458 68.421 0.00 0.00 0.00 3.84
4174 4599 2.042404 CTCTGCCCCTCTGCCTCATC 62.042 65.000 0.00 0.00 0.00 2.92
4175 4600 2.041762 TCTGCCCCTCTGCCTCAT 59.958 61.111 0.00 0.00 0.00 2.90
4176 4601 2.686470 CTCTGCCCCTCTGCCTCA 60.686 66.667 0.00 0.00 0.00 3.86
4177 4602 2.364842 TCTCTGCCCCTCTGCCTC 60.365 66.667 0.00 0.00 0.00 4.70
4178 4603 2.365370 CTCTCTGCCCCTCTGCCT 60.365 66.667 0.00 0.00 0.00 4.75
4179 4604 3.478274 CCTCTCTGCCCCTCTGCC 61.478 72.222 0.00 0.00 0.00 4.85
4180 4605 2.364842 TCCTCTCTGCCCCTCTGC 60.365 66.667 0.00 0.00 0.00 4.26
4181 4606 1.761667 CCTCCTCTCTGCCCCTCTG 60.762 68.421 0.00 0.00 0.00 3.35
4182 4607 2.695597 CCTCCTCTCTGCCCCTCT 59.304 66.667 0.00 0.00 0.00 3.69
4183 4608 3.160748 GCCTCCTCTCTGCCCCTC 61.161 72.222 0.00 0.00 0.00 4.30
4187 4612 3.780173 AAGCGCCTCCTCTCTGCC 61.780 66.667 2.29 0.00 0.00 4.85
4188 4613 2.511145 CAAGCGCCTCCTCTCTGC 60.511 66.667 2.29 0.00 0.00 4.26
4189 4614 1.447489 CACAAGCGCCTCCTCTCTG 60.447 63.158 2.29 0.00 0.00 3.35
4190 4615 2.977178 CACAAGCGCCTCCTCTCT 59.023 61.111 2.29 0.00 0.00 3.10
4191 4616 2.817396 GCACAAGCGCCTCCTCTC 60.817 66.667 2.29 0.00 0.00 3.20
4202 4627 4.680237 TGTCCTCCGCCGCACAAG 62.680 66.667 0.00 0.00 0.00 3.16
4203 4628 4.680237 CTGTCCTCCGCCGCACAA 62.680 66.667 0.00 0.00 0.00 3.33
4211 4636 2.317149 GAATGGCCTCCTGTCCTCCG 62.317 65.000 3.32 0.00 0.00 4.63
4212 4637 1.529309 GAATGGCCTCCTGTCCTCC 59.471 63.158 3.32 0.00 0.00 4.30
4213 4638 1.529309 GGAATGGCCTCCTGTCCTC 59.471 63.158 3.32 0.00 32.21 3.71
4214 4639 2.370445 CGGAATGGCCTCCTGTCCT 61.370 63.158 3.32 0.00 32.82 3.85
4215 4640 2.190578 CGGAATGGCCTCCTGTCC 59.809 66.667 3.32 2.41 32.82 4.02
4216 4641 1.153349 GACGGAATGGCCTCCTGTC 60.153 63.158 3.32 11.57 34.35 3.51
4217 4642 2.990479 GACGGAATGGCCTCCTGT 59.010 61.111 3.32 6.27 32.82 4.00
4218 4643 2.202932 CGACGGAATGGCCTCCTG 60.203 66.667 3.32 2.90 32.82 3.86
4219 4644 3.470888 CCGACGGAATGGCCTCCT 61.471 66.667 8.64 0.00 32.82 3.69
4220 4645 4.547367 CCCGACGGAATGGCCTCC 62.547 72.222 17.49 1.80 0.00 4.30
4221 4646 3.325201 AACCCGACGGAATGGCCTC 62.325 63.158 17.49 0.00 0.00 4.70
4222 4647 3.325201 GAACCCGACGGAATGGCCT 62.325 63.158 17.49 0.00 0.00 5.19
4223 4648 2.822701 GAACCCGACGGAATGGCC 60.823 66.667 17.49 0.00 0.00 5.36
4224 4649 1.451387 ATGAACCCGACGGAATGGC 60.451 57.895 17.49 0.25 0.00 4.40
4225 4650 1.095228 CCATGAACCCGACGGAATGG 61.095 60.000 17.49 17.58 34.27 3.16
4226 4651 1.714899 GCCATGAACCCGACGGAATG 61.715 60.000 17.49 12.80 0.00 2.67
4227 4652 1.451387 GCCATGAACCCGACGGAAT 60.451 57.895 17.49 2.75 0.00 3.01
4228 4653 2.046700 GCCATGAACCCGACGGAA 60.047 61.111 17.49 0.00 0.00 4.30
4229 4654 4.444838 CGCCATGAACCCGACGGA 62.445 66.667 17.49 0.00 0.00 4.69
4230 4655 4.752879 ACGCCATGAACCCGACGG 62.753 66.667 6.99 6.99 0.00 4.79
4231 4656 2.235536 GAAACGCCATGAACCCGACG 62.236 60.000 0.00 0.00 0.00 5.12
4232 4657 1.500396 GAAACGCCATGAACCCGAC 59.500 57.895 0.00 0.00 0.00 4.79
4233 4658 1.673009 GGAAACGCCATGAACCCGA 60.673 57.895 0.00 0.00 36.34 5.14
4234 4659 2.874751 GGAAACGCCATGAACCCG 59.125 61.111 0.00 0.00 36.34 5.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.