Multiple sequence alignment - TraesCS2A01G363200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G363200 chr2A 100.000 5384 0 0 1 5384 607516820 607522203 0.000000e+00 9943.0
1 TraesCS2A01G363200 chr2A 93.912 657 33 5 2552 3203 610225938 610226592 0.000000e+00 985.0
2 TraesCS2A01G363200 chr2A 85.030 1002 106 29 2319 3310 607598746 607599713 0.000000e+00 979.0
3 TraesCS2A01G363200 chr2A 93.796 548 32 2 1440 1985 610210480 610211027 0.000000e+00 822.0
4 TraesCS2A01G363200 chr2A 93.142 452 24 2 521 972 610209547 610209991 0.000000e+00 656.0
5 TraesCS2A01G363200 chr2A 95.641 390 10 6 3636 4025 610227186 610227568 2.130000e-173 619.0
6 TraesCS2A01G363200 chr2A 89.822 393 13 5 4112 4501 610234027 610234395 3.770000e-131 479.0
7 TraesCS2A01G363200 chr2A 82.432 444 59 15 1546 1981 607598058 607598490 2.370000e-98 370.0
8 TraesCS2A01G363200 chr2A 94.819 193 7 2 3439 3631 610226821 610227010 1.130000e-76 298.0
9 TraesCS2A01G363200 chr2A 82.484 314 27 6 2131 2419 610211072 610211382 3.220000e-62 250.0
10 TraesCS2A01G363200 chr2A 85.039 254 25 8 3443 3685 607599169 607599420 4.160000e-61 246.0
11 TraesCS2A01G363200 chr2A 97.794 136 3 0 3305 3440 777043032 777043167 9.020000e-58 235.0
12 TraesCS2A01G363200 chr2A 83.588 262 28 7 3439 3685 610226136 610226397 1.170000e-56 231.0
13 TraesCS2A01G363200 chr2A 83.525 261 28 9 3439 3685 607519569 607519828 4.190000e-56 230.0
14 TraesCS2A01G363200 chr2A 83.525 261 28 9 2750 3009 607520258 607520504 4.190000e-56 230.0
15 TraesCS2A01G363200 chr2A 81.720 279 28 11 1124 1383 607597443 607597717 1.520000e-50 211.0
16 TraesCS2A01G363200 chr2A 85.308 211 19 7 2740 2949 610226811 610227010 1.970000e-49 207.0
17 TraesCS2A01G363200 chr2A 93.130 131 8 1 4555 4685 610234402 610234531 1.980000e-44 191.0
18 TraesCS2A01G363200 chr2A 96.226 106 4 0 3205 3310 610226719 610226824 1.990000e-39 174.0
19 TraesCS2A01G363200 chr2A 91.057 123 8 1 3752 3871 607600120 607600242 4.310000e-36 163.0
20 TraesCS2A01G363200 chr2A 91.566 83 7 0 1445 1527 607597822 607597904 1.230000e-21 115.0
21 TraesCS2A01G363200 chr2A 96.226 53 2 0 4947 4999 610234668 610234720 2.670000e-13 87.9
22 TraesCS2A01G363200 chr2A 97.368 38 1 0 4653 4690 607521386 607521423 1.250000e-06 65.8
23 TraesCS2A01G363200 chr2A 97.368 38 1 0 4567 4604 607521472 607521509 1.250000e-06 65.8
24 TraesCS2A01G363200 chr2D 91.481 1209 70 14 2131 3310 462246259 462247463 0.000000e+00 1631.0
25 TraesCS2A01G363200 chr2D 91.145 1197 58 19 1 1155 462244248 462245438 0.000000e+00 1580.0
26 TraesCS2A01G363200 chr2D 92.500 800 48 8 1189 1985 462245424 462246214 0.000000e+00 1134.0
27 TraesCS2A01G363200 chr2D 82.961 1074 122 31 2133 3165 462785098 462786151 0.000000e+00 913.0
28 TraesCS2A01G363200 chr2D 95.213 564 22 4 3439 4001 462247460 462248019 0.000000e+00 887.0
29 TraesCS2A01G363200 chr2D 96.525 518 10 3 4108 4617 462248011 462248528 0.000000e+00 850.0
30 TraesCS2A01G363200 chr2D 91.618 346 22 6 4817 5155 462248771 462249116 6.310000e-129 472.0
31 TraesCS2A01G363200 chr2D 83.795 469 46 18 3430 3875 462786270 462786731 8.340000e-113 418.0
32 TraesCS2A01G363200 chr2D 82.889 450 63 6 1535 1981 462784604 462785042 5.060000e-105 392.0
33 TraesCS2A01G363200 chr2D 81.443 388 37 16 1015 1383 462783892 462784263 8.830000e-73 285.0
34 TraesCS2A01G363200 chr2D 93.827 162 9 1 4614 4775 462248608 462248768 5.390000e-60 243.0
35 TraesCS2A01G363200 chr2D 83.969 262 27 7 3439 3685 462246899 462247160 2.510000e-58 237.0
36 TraesCS2A01G363200 chr2D 91.860 86 7 0 1449 1534 462784370 462784455 2.630000e-23 121.0
37 TraesCS2A01G363200 chr2D 86.598 97 10 2 4028 4123 381885189 381885095 2.650000e-18 104.0
38 TraesCS2A01G363200 chr2D 97.368 38 1 0 4653 4690 462248478 462248515 1.250000e-06 65.8
39 TraesCS2A01G363200 chr2B 90.307 1269 63 22 1 1221 545157052 545158308 0.000000e+00 1607.0
40 TraesCS2A01G363200 chr2B 87.030 1411 85 35 3871 5222 545160020 545161391 0.000000e+00 1502.0
41 TraesCS2A01G363200 chr2B 85.410 987 101 33 2340 3310 545227737 545228696 0.000000e+00 985.0
42 TraesCS2A01G363200 chr2B 91.989 699 42 6 1266 1961 545158305 545158992 0.000000e+00 968.0
43 TraesCS2A01G363200 chr2B 93.443 305 11 1 2319 2623 545159155 545159450 1.380000e-120 444.0
44 TraesCS2A01G363200 chr2B 82.900 462 53 14 3430 3871 545228685 545229140 5.060000e-105 392.0
45 TraesCS2A01G363200 chr2B 80.353 453 63 12 1535 1981 545227023 545227455 2.420000e-83 320.0
46 TraesCS2A01G363200 chr2B 82.946 387 32 18 1015 1383 545226310 545226680 8.700000e-83 318.0
47 TraesCS2A01G363200 chr2B 84.980 253 28 5 3443 3685 545228152 545228404 1.160000e-61 248.0
48 TraesCS2A01G363200 chr2B 94.340 106 6 0 2916 3021 545159447 545159552 4.310000e-36 163.0
49 TraesCS2A01G363200 chr2B 98.901 91 1 0 3220 3310 545159559 545159649 4.310000e-36 163.0
50 TraesCS2A01G363200 chr2B 96.939 98 1 2 3776 3871 545159893 545159990 4.310000e-36 163.0
51 TraesCS2A01G363200 chr2B 90.110 91 4 3 4028 4117 494265167 494265081 4.410000e-21 113.0
52 TraesCS2A01G363200 chr2B 90.698 86 5 2 4028 4113 483452955 483453037 1.590000e-20 111.0
53 TraesCS2A01G363200 chr2B 87.629 97 9 2 4028 4123 452774125 452774031 5.700000e-20 110.0
54 TraesCS2A01G363200 chr3D 97.794 136 3 0 3305 3440 405859189 405859324 9.020000e-58 235.0
55 TraesCS2A01G363200 chr3D 93.750 128 6 2 5203 5328 614541924 614541797 1.980000e-44 191.0
56 TraesCS2A01G363200 chr5D 97.122 139 3 1 3303 3441 396236521 396236384 3.240000e-57 233.0
57 TraesCS2A01G363200 chr5D 97.656 128 3 0 3312 3439 485934573 485934446 2.520000e-53 220.0
58 TraesCS2A01G363200 chr1A 97.059 136 4 0 3305 3440 480748994 480749129 4.190000e-56 230.0
59 TraesCS2A01G363200 chr1A 95.763 118 5 0 1982 2099 459516906 459516789 1.980000e-44 191.0
60 TraesCS2A01G363200 chr1A 93.651 126 6 2 1978 2102 188148768 188148892 2.560000e-43 187.0
61 TraesCS2A01G363200 chr5A 98.438 128 2 0 3312 3439 32938068 32937941 5.430000e-55 226.0
62 TraesCS2A01G363200 chr4B 97.710 131 3 0 3309 3439 403331414 403331544 5.430000e-55 226.0
63 TraesCS2A01G363200 chr4B 95.041 121 5 1 1980 2099 183611087 183611207 7.120000e-44 189.0
64 TraesCS2A01G363200 chr4B 94.309 123 6 1 1979 2100 564869464 564869586 2.560000e-43 187.0
65 TraesCS2A01G363200 chr3A 97.015 134 4 0 3307 3440 732394835 732394968 5.430000e-55 226.0
66 TraesCS2A01G363200 chr3A 98.246 114 2 0 5214 5327 308676031 308675918 3.290000e-47 200.0
67 TraesCS2A01G363200 chr3A 94.400 125 4 3 5203 5327 152176498 152176377 7.120000e-44 189.0
68 TraesCS2A01G363200 chr3A 88.889 90 7 2 4028 4117 57262234 57262148 2.050000e-19 108.0
69 TraesCS2A01G363200 chr4A 96.296 135 5 0 3305 3439 227083824 227083690 7.020000e-54 222.0
70 TraesCS2A01G363200 chr4A 97.273 110 3 0 5218 5327 638673169 638673060 2.560000e-43 187.0
71 TraesCS2A01G363200 chr4A 91.241 137 10 2 5216 5350 98600195 98600059 9.210000e-43 185.0
72 TraesCS2A01G363200 chr4A 93.600 125 5 3 5203 5327 127407649 127407770 3.310000e-42 183.0
73 TraesCS2A01G363200 chr4A 93.600 125 5 3 5203 5327 386088116 386088237 3.310000e-42 183.0
74 TraesCS2A01G363200 chr6A 96.581 117 3 1 5210 5326 108945428 108945313 5.500000e-45 193.0
75 TraesCS2A01G363200 chr1B 95.122 123 4 2 1978 2099 611680419 611680540 5.500000e-45 193.0
76 TraesCS2A01G363200 chr1B 93.548 124 6 2 1977 2100 267997582 267997461 3.310000e-42 183.0
77 TraesCS2A01G363200 chr4D 95.082 122 5 1 1983 2103 367720887 367720766 1.980000e-44 191.0
78 TraesCS2A01G363200 chr4D 92.632 95 7 0 2774 2868 432946377 432946471 2.620000e-28 137.0
79 TraesCS2A01G363200 chr4D 95.385 65 3 0 2247 2311 432945936 432946000 2.650000e-18 104.0
80 TraesCS2A01G363200 chr4D 92.754 69 4 1 1665 1733 432948941 432949008 1.230000e-16 99.0
81 TraesCS2A01G363200 chr7B 93.548 124 6 2 1982 2104 143329515 143329393 3.310000e-42 183.0
82 TraesCS2A01G363200 chr7B 88.043 92 7 3 4028 4118 639796201 639796289 7.380000e-19 106.0
83 TraesCS2A01G363200 chr3B 91.176 136 8 3 1968 2100 70295849 70295983 1.190000e-41 182.0
84 TraesCS2A01G363200 chr6D 89.855 138 12 2 5208 5343 455247243 455247106 5.540000e-40 176.0
85 TraesCS2A01G363200 chr6D 92.754 69 4 1 1665 1733 292399063 292399130 1.230000e-16 99.0
86 TraesCS2A01G363200 chr6D 92.188 64 5 0 2248 2311 125022020 125022083 2.070000e-14 91.6
87 TraesCS2A01G363200 chr5B 92.784 97 5 2 2774 2869 13841837 13841932 7.270000e-29 139.0
88 TraesCS2A01G363200 chr5B 90.698 86 5 3 4028 4112 21154090 21154007 1.590000e-20 111.0
89 TraesCS2A01G363200 chr5B 92.063 63 5 0 2249 2311 13829972 13830034 7.430000e-14 89.8
90 TraesCS2A01G363200 chr7D 87.234 94 9 2 4020 4113 218418299 218418389 2.650000e-18 104.0
91 TraesCS2A01G363200 chr6B 91.892 74 4 2 1665 1738 121782596 121782525 9.540000e-18 102.0
92 TraesCS2A01G363200 chr6B 92.188 64 5 0 2248 2311 223258921 223258984 2.070000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G363200 chr2A 607516820 607522203 5383 False 2106.920000 9943 92.357200 1 5384 5 chr2A.!!$F2 5383
1 TraesCS2A01G363200 chr2A 610209547 610211382 1835 False 576.000000 822 89.807333 521 2419 3 chr2A.!!$F4 1898
2 TraesCS2A01G363200 chr2A 610225938 610227568 1630 False 419.000000 985 91.582333 2552 4025 6 chr2A.!!$F5 1473
3 TraesCS2A01G363200 chr2A 607597443 607600242 2799 False 347.333333 979 86.140667 1124 3871 6 chr2A.!!$F3 2747
4 TraesCS2A01G363200 chr2A 610234027 610234720 693 False 252.633333 479 93.059333 4112 4999 3 chr2A.!!$F6 887
5 TraesCS2A01G363200 chr2D 462244248 462249116 4868 False 788.866667 1631 92.627333 1 5155 9 chr2D.!!$F1 5154
6 TraesCS2A01G363200 chr2D 462783892 462786731 2839 False 425.800000 913 84.589600 1015 3875 5 chr2D.!!$F2 2860
7 TraesCS2A01G363200 chr2B 545157052 545161391 4339 False 715.714286 1607 93.278429 1 5222 7 chr2B.!!$F2 5221
8 TraesCS2A01G363200 chr2B 545226310 545229140 2830 False 452.600000 985 83.317800 1015 3871 5 chr2B.!!$F3 2856

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
984 1025 0.322546 ATTGACCTCCGCCACCTTTC 60.323 55.0 0.0 0.0 0.00 2.62 F
1999 2578 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.0 0.0 0.0 0.00 3.46 F
2311 2908 0.318614 ATTTGTTTGCCTTGCCGACG 60.319 50.0 0.0 0.0 0.00 5.12 F
3337 4126 0.246635 CGGTTACACCTCCTCACAGG 59.753 60.0 0.0 0.0 35.66 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2086 2665 0.600057 AAACACGTACTCCCTCCGTC 59.400 55.0 0.00 0.00 31.46 4.79 R
3338 4127 0.106015 CTCCAATCCACCCCAATCCC 60.106 60.0 0.00 0.00 0.00 3.85 R
3339 4128 0.106015 CCTCCAATCCACCCCAATCC 60.106 60.0 0.00 0.00 0.00 3.01 R
5307 6537 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
137 138 1.059913 CGCTTTCCCCATATCCTCCT 58.940 55.000 0.00 0.00 0.00 3.69
138 139 1.002544 CGCTTTCCCCATATCCTCCTC 59.997 57.143 0.00 0.00 0.00 3.71
139 140 1.352687 GCTTTCCCCATATCCTCCTCC 59.647 57.143 0.00 0.00 0.00 4.30
261 286 7.275920 CCAGTGCTACTTACATTAGGAGAAAT 58.724 38.462 0.00 0.00 0.00 2.17
265 290 6.157994 TGCTACTTACATTAGGAGAAATGGGT 59.842 38.462 2.05 1.24 40.48 4.51
278 303 3.970363 ATGGGTGGGTGGGGAGGAG 62.970 68.421 0.00 0.00 0.00 3.69
418 443 1.202154 ACGTAGAAGAAGGCGATCACG 60.202 52.381 0.00 0.00 42.93 4.35
771 802 5.707298 CAGGCTCAGAGTTTATGGAGAAAAA 59.293 40.000 0.00 0.00 0.00 1.94
779 810 8.726988 CAGAGTTTATGGAGAAAAATCCGTTAA 58.273 33.333 0.00 0.00 42.77 2.01
782 813 7.122204 AGTTTATGGAGAAAAATCCGTTAAGGG 59.878 37.037 7.93 7.93 42.77 3.95
919 950 2.034305 CCCAGCCCGCGTATATATAGAC 59.966 54.545 4.92 0.00 0.00 2.59
950 981 1.449423 CCACCCGAATGTCGCATCA 60.449 57.895 0.00 0.00 38.82 3.07
952 983 1.809619 ACCCGAATGTCGCATCACG 60.810 57.895 0.00 10.04 45.62 4.35
968 999 4.433102 CGTCGCCGTTCCAAATTG 57.567 55.556 0.00 0.00 0.00 2.32
969 1000 1.863491 CGTCGCCGTTCCAAATTGA 59.137 52.632 0.00 0.00 0.00 2.57
984 1025 0.322546 ATTGACCTCCGCCACCTTTC 60.323 55.000 0.00 0.00 0.00 2.62
988 1029 2.345991 CTCCGCCACCTTTCCGAA 59.654 61.111 0.00 0.00 0.00 4.30
989 1030 1.741770 CTCCGCCACCTTTCCGAAG 60.742 63.158 0.00 0.00 0.00 3.79
990 1031 2.032071 CCGCCACCTTTCCGAAGT 59.968 61.111 0.00 0.00 0.00 3.01
1098 1244 1.130561 GCCAACAAGTAATGCTCGACC 59.869 52.381 0.00 0.00 0.00 4.79
1155 1319 1.227639 AGATCTACCCGTCGTCATCG 58.772 55.000 0.00 0.00 38.55 3.84
1175 1362 2.253452 CGAGGGTTTCGTCGTCGT 59.747 61.111 1.33 0.00 44.27 4.34
1177 1364 1.602877 CGAGGGTTTCGTCGTCGTTG 61.603 60.000 1.33 0.00 44.27 4.10
1178 1365 0.318107 GAGGGTTTCGTCGTCGTTGA 60.318 55.000 1.33 0.00 38.33 3.18
1179 1366 0.316204 AGGGTTTCGTCGTCGTTGAT 59.684 50.000 1.33 0.00 38.33 2.57
1180 1367 1.142474 GGGTTTCGTCGTCGTTGATT 58.858 50.000 1.33 0.00 38.33 2.57
1281 1485 3.132824 AGCCACATCATCTCGTTGTATCA 59.867 43.478 0.00 0.00 0.00 2.15
1349 1556 1.003116 GGCGCATCAAGCTCTTACATG 60.003 52.381 10.83 0.00 42.61 3.21
1364 1735 6.237942 GCTCTTACATGTACATGCTACTGTTG 60.238 42.308 31.19 16.46 42.39 3.33
1402 1815 5.106673 GCATGTACTAGGAACAAGGTCAAAC 60.107 44.000 4.51 0.00 0.00 2.93
1413 1827 6.481976 GGAACAAGGTCAAACTTTATTTTGGG 59.518 38.462 0.00 0.00 37.13 4.12
1518 1938 5.633927 TGATCGCTTGATTCAAAGAACATG 58.366 37.500 0.01 0.00 30.70 3.21
1536 1956 3.254060 CATGTAAGGGACTGAGTCGTTG 58.746 50.000 6.50 0.00 40.86 4.10
1626 2197 9.424319 GAGAGTCTTGTTATGTTTGATTGTCTA 57.576 33.333 0.00 0.00 0.00 2.59
1627 2198 9.429359 AGAGTCTTGTTATGTTTGATTGTCTAG 57.571 33.333 0.00 0.00 0.00 2.43
1640 2213 7.490962 TTGATTGTCTAGTTGAAATGACGTT 57.509 32.000 0.00 0.00 32.64 3.99
1770 2344 1.405105 ACATGTGTGTGCTGTGTTTCC 59.595 47.619 0.00 0.00 37.14 3.13
1783 2357 4.261994 GCTGTGTTTCCTTTCCTATTTGCA 60.262 41.667 0.00 0.00 0.00 4.08
1847 2426 6.054860 ACTATGAGCTGGTATTCAGTTTGT 57.945 37.500 0.00 0.00 45.08 2.83
1969 2548 9.547753 GAGTTATAATGGAGAATTTGCACTAGA 57.452 33.333 0.00 0.00 0.00 2.43
1975 2554 6.992063 TGGAGAATTTGCACTAGATTTCTC 57.008 37.500 0.00 10.34 0.00 2.87
1985 2564 8.447924 TTGCACTAGATTTCTCGTATAGTACT 57.552 34.615 0.00 0.00 0.00 2.73
1986 2565 8.085720 TGCACTAGATTTCTCGTATAGTACTC 57.914 38.462 0.00 0.00 0.00 2.59
1988 2567 7.361116 GCACTAGATTTCTCGTATAGTACTCCC 60.361 44.444 0.00 0.00 0.00 4.30
1989 2568 7.879160 CACTAGATTTCTCGTATAGTACTCCCT 59.121 40.741 0.00 0.00 0.00 4.20
1990 2569 8.096414 ACTAGATTTCTCGTATAGTACTCCCTC 58.904 40.741 0.00 0.00 0.00 4.30
1991 2570 6.240145 AGATTTCTCGTATAGTACTCCCTCC 58.760 44.000 0.00 0.00 0.00 4.30
1992 2571 3.674528 TCTCGTATAGTACTCCCTCCG 57.325 52.381 0.00 0.00 0.00 4.63
1993 2572 2.968574 TCTCGTATAGTACTCCCTCCGT 59.031 50.000 0.00 0.00 0.00 4.69
1994 2573 3.006323 TCTCGTATAGTACTCCCTCCGTC 59.994 52.174 0.00 0.00 0.00 4.79
1995 2574 2.037772 TCGTATAGTACTCCCTCCGTCC 59.962 54.545 0.00 0.00 0.00 4.79
1996 2575 2.421619 GTATAGTACTCCCTCCGTCCG 58.578 57.143 0.00 0.00 0.00 4.79
1997 2576 1.135094 ATAGTACTCCCTCCGTCCGA 58.865 55.000 0.00 0.00 0.00 4.55
1998 2577 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
1999 2578 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
2000 2579 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2001 2580 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
2002 2581 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
2003 2582 0.320697 CTCCCTCCGTCCGAAAAAGT 59.679 55.000 0.00 0.00 0.00 2.66
2004 2583 0.760572 TCCCTCCGTCCGAAAAAGTT 59.239 50.000 0.00 0.00 0.00 2.66
2005 2584 1.141455 TCCCTCCGTCCGAAAAAGTTT 59.859 47.619 0.00 0.00 0.00 2.66
2006 2585 1.265905 CCCTCCGTCCGAAAAAGTTTG 59.734 52.381 0.00 0.00 0.00 2.93
2007 2586 1.944709 CCTCCGTCCGAAAAAGTTTGT 59.055 47.619 0.00 0.00 0.00 2.83
2008 2587 2.032290 CCTCCGTCCGAAAAAGTTTGTC 60.032 50.000 0.00 0.00 0.00 3.18
2009 2588 1.941975 TCCGTCCGAAAAAGTTTGTCC 59.058 47.619 0.00 0.00 0.00 4.02
2010 2589 1.002142 CCGTCCGAAAAAGTTTGTCCC 60.002 52.381 0.00 0.00 0.00 4.46
2011 2590 1.671845 CGTCCGAAAAAGTTTGTCCCA 59.328 47.619 0.00 0.00 0.00 4.37
2012 2591 2.097791 CGTCCGAAAAAGTTTGTCCCAA 59.902 45.455 0.00 0.00 0.00 4.12
2013 2592 3.702330 GTCCGAAAAAGTTTGTCCCAAG 58.298 45.455 0.00 0.00 0.00 3.61
2014 2593 2.100087 TCCGAAAAAGTTTGTCCCAAGC 59.900 45.455 0.00 0.00 0.00 4.01
2015 2594 2.100749 CCGAAAAAGTTTGTCCCAAGCT 59.899 45.455 0.00 0.00 0.00 3.74
2016 2595 3.430236 CCGAAAAAGTTTGTCCCAAGCTT 60.430 43.478 0.00 0.00 0.00 3.74
2017 2596 3.551485 CGAAAAAGTTTGTCCCAAGCTTG 59.449 43.478 19.93 19.93 0.00 4.01
2018 2597 4.503910 GAAAAAGTTTGTCCCAAGCTTGT 58.496 39.130 24.35 1.28 0.00 3.16
2019 2598 3.801114 AAAGTTTGTCCCAAGCTTGTC 57.199 42.857 24.35 14.49 0.00 3.18
2020 2599 2.736670 AGTTTGTCCCAAGCTTGTCT 57.263 45.000 24.35 8.36 0.00 3.41
2021 2600 2.576615 AGTTTGTCCCAAGCTTGTCTC 58.423 47.619 24.35 13.85 0.00 3.36
2022 2601 2.173569 AGTTTGTCCCAAGCTTGTCTCT 59.826 45.455 24.35 9.92 0.00 3.10
2023 2602 2.550180 GTTTGTCCCAAGCTTGTCTCTC 59.450 50.000 24.35 10.65 0.00 3.20
2024 2603 1.423584 TGTCCCAAGCTTGTCTCTCA 58.576 50.000 24.35 12.85 0.00 3.27
2025 2604 1.768275 TGTCCCAAGCTTGTCTCTCAA 59.232 47.619 24.35 1.41 34.61 3.02
2026 2605 2.172505 TGTCCCAAGCTTGTCTCTCAAA 59.827 45.455 24.35 0.00 35.48 2.69
2027 2606 3.181440 TGTCCCAAGCTTGTCTCTCAAAT 60.181 43.478 24.35 0.00 35.48 2.32
2028 2607 3.190118 GTCCCAAGCTTGTCTCTCAAATG 59.810 47.826 24.35 5.47 35.48 2.32
2029 2608 2.490903 CCCAAGCTTGTCTCTCAAATGG 59.509 50.000 24.35 10.71 35.48 3.16
2030 2609 3.415212 CCAAGCTTGTCTCTCAAATGGA 58.585 45.455 24.35 0.00 36.92 3.41
2031 2610 4.015084 CCAAGCTTGTCTCTCAAATGGAT 58.985 43.478 24.35 0.00 36.92 3.41
2032 2611 4.142447 CCAAGCTTGTCTCTCAAATGGATG 60.142 45.833 24.35 0.00 36.92 3.51
2033 2612 4.298103 AGCTTGTCTCTCAAATGGATGT 57.702 40.909 0.00 0.00 35.48 3.06
2034 2613 5.426689 AGCTTGTCTCTCAAATGGATGTA 57.573 39.130 0.00 0.00 35.48 2.29
2035 2614 5.999044 AGCTTGTCTCTCAAATGGATGTAT 58.001 37.500 0.00 0.00 35.48 2.29
2036 2615 6.054295 AGCTTGTCTCTCAAATGGATGTATC 58.946 40.000 0.00 0.00 35.48 2.24
2037 2616 6.054295 GCTTGTCTCTCAAATGGATGTATCT 58.946 40.000 0.00 0.00 35.48 1.98
2038 2617 7.070447 AGCTTGTCTCTCAAATGGATGTATCTA 59.930 37.037 0.00 0.00 35.48 1.98
2039 2618 7.384660 GCTTGTCTCTCAAATGGATGTATCTAG 59.615 40.741 0.00 0.00 35.48 2.43
2040 2619 6.753180 TGTCTCTCAAATGGATGTATCTAGC 58.247 40.000 0.00 0.00 0.00 3.42
2041 2620 6.324770 TGTCTCTCAAATGGATGTATCTAGCA 59.675 38.462 0.00 0.00 0.00 3.49
2042 2621 6.644592 GTCTCTCAAATGGATGTATCTAGCAC 59.355 42.308 0.00 0.00 0.00 4.40
2043 2622 6.552725 TCTCTCAAATGGATGTATCTAGCACT 59.447 38.462 0.00 0.00 0.00 4.40
2044 2623 7.725844 TCTCTCAAATGGATGTATCTAGCACTA 59.274 37.037 0.00 0.00 0.00 2.74
2045 2624 8.250143 TCTCAAATGGATGTATCTAGCACTAA 57.750 34.615 0.00 0.00 0.00 2.24
2046 2625 8.144478 TCTCAAATGGATGTATCTAGCACTAAC 58.856 37.037 0.00 0.00 0.00 2.34
2047 2626 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
2048 2627 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
2049 2628 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
2050 2629 7.603180 ATGGATGTATCTAGCACTAACTTGA 57.397 36.000 0.00 0.00 0.00 3.02
2051 2630 7.603180 TGGATGTATCTAGCACTAACTTGAT 57.397 36.000 0.00 0.00 36.37 2.57
2052 2631 7.436933 TGGATGTATCTAGCACTAACTTGATG 58.563 38.462 0.00 0.00 34.60 3.07
2053 2632 6.367422 GGATGTATCTAGCACTAACTTGATGC 59.633 42.308 0.00 0.00 39.74 3.91
2063 2642 7.344910 GCACTAACTTGATGCTAGATACATC 57.655 40.000 0.00 0.00 43.46 3.06
2064 2643 6.367422 GCACTAACTTGATGCTAGATACATCC 59.633 42.308 0.00 0.00 42.68 3.51
2065 2644 7.436933 CACTAACTTGATGCTAGATACATCCA 58.563 38.462 0.00 0.00 42.68 3.41
2066 2645 8.093307 CACTAACTTGATGCTAGATACATCCAT 58.907 37.037 0.00 0.00 42.68 3.41
2067 2646 8.654997 ACTAACTTGATGCTAGATACATCCATT 58.345 33.333 0.00 0.00 42.68 3.16
2068 2647 9.499479 CTAACTTGATGCTAGATACATCCATTT 57.501 33.333 0.00 0.00 42.68 2.32
2069 2648 7.741027 ACTTGATGCTAGATACATCCATTTG 57.259 36.000 0.00 0.00 42.68 2.32
2070 2649 7.512130 ACTTGATGCTAGATACATCCATTTGA 58.488 34.615 0.00 0.00 42.68 2.69
2071 2650 7.660617 ACTTGATGCTAGATACATCCATTTGAG 59.339 37.037 0.00 0.00 42.68 3.02
2072 2651 7.307131 TGATGCTAGATACATCCATTTGAGA 57.693 36.000 0.00 0.00 42.68 3.27
2073 2652 7.384477 TGATGCTAGATACATCCATTTGAGAG 58.616 38.462 0.00 0.00 42.68 3.20
2074 2653 6.983906 TGCTAGATACATCCATTTGAGAGA 57.016 37.500 0.00 0.00 0.00 3.10
2075 2654 6.753180 TGCTAGATACATCCATTTGAGAGAC 58.247 40.000 0.00 0.00 0.00 3.36
2076 2655 6.324770 TGCTAGATACATCCATTTGAGAGACA 59.675 38.462 0.00 0.00 0.00 3.41
2077 2656 7.147672 TGCTAGATACATCCATTTGAGAGACAA 60.148 37.037 0.00 0.00 36.65 3.18
2078 2657 7.877097 GCTAGATACATCCATTTGAGAGACAAT 59.123 37.037 0.00 0.00 38.36 2.71
2079 2658 9.775854 CTAGATACATCCATTTGAGAGACAATT 57.224 33.333 0.00 0.00 38.36 2.32
2081 2660 9.471702 AGATACATCCATTTGAGAGACAATTTT 57.528 29.630 0.00 0.00 38.36 1.82
2097 2676 2.444281 TTTTTCGGACGGAGGGAGT 58.556 52.632 0.00 0.00 0.00 3.85
2098 2677 1.631405 TTTTTCGGACGGAGGGAGTA 58.369 50.000 0.00 0.00 0.00 2.59
2099 2678 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
2100 2679 1.308069 TTTCGGACGGAGGGAGTACG 61.308 60.000 0.00 0.00 46.50 3.67
2107 2686 1.000171 ACGGAGGGAGTACGTGTTTTC 60.000 52.381 0.00 0.00 39.64 2.29
2162 2758 6.393990 ACCAGTATTTCGCTCATATCTGATC 58.606 40.000 0.00 0.00 0.00 2.92
2169 2765 3.006217 TCGCTCATATCTGATCACCTTGG 59.994 47.826 0.00 0.00 0.00 3.61
2185 2781 0.539986 TTGGTCGCACCCCTTATCTC 59.460 55.000 3.33 0.00 37.50 2.75
2192 2788 4.157289 GTCGCACCCCTTATCTCGATAATA 59.843 45.833 0.24 0.00 33.29 0.98
2193 2789 4.768448 TCGCACCCCTTATCTCGATAATAA 59.232 41.667 0.24 0.00 33.29 1.40
2194 2790 5.244402 TCGCACCCCTTATCTCGATAATAAA 59.756 40.000 0.24 0.00 33.29 1.40
2246 2843 4.377021 ACGAAACTGTCTGAATTGCTACA 58.623 39.130 0.00 0.00 0.00 2.74
2255 2852 2.877168 CTGAATTGCTACAGAGGATGGC 59.123 50.000 0.00 0.00 36.38 4.40
2311 2908 0.318614 ATTTGTTTGCCTTGCCGACG 60.319 50.000 0.00 0.00 0.00 5.12
2315 2912 3.469863 TTTGCCTTGCCGACGACCT 62.470 57.895 0.00 0.00 0.00 3.85
2316 2913 3.876589 TTGCCTTGCCGACGACCTC 62.877 63.158 0.00 0.00 0.00 3.85
2353 2979 5.175859 TGTTTTATTTTGTTCGTTTGGCCA 58.824 33.333 0.00 0.00 0.00 5.36
2509 3136 4.767578 AGTGCATAGTTCAGATGACCAT 57.232 40.909 0.00 0.00 0.00 3.55
2718 3351 5.733620 ATGATTTCATTTGGCTGAGTTGT 57.266 34.783 0.00 0.00 31.37 3.32
2820 3461 1.829222 CCAGTCTTAGGGTCCGCTTTA 59.171 52.381 0.00 0.00 0.00 1.85
2847 3488 7.065085 GTGTATCTGTGCTGATTGACATACTTT 59.935 37.037 0.00 0.00 0.00 2.66
3038 3683 2.400399 CAAACTCTTGCATGTGCCTTG 58.600 47.619 2.07 2.06 41.18 3.61
3194 3858 2.154462 CCTCTTGAACAAATCCACGCT 58.846 47.619 0.00 0.00 0.00 5.07
3203 3867 3.347216 ACAAATCCACGCTTGCTATCTT 58.653 40.909 0.00 0.00 0.00 2.40
3313 4102 9.944376 TGATTGTACTAAAGATGCTTTAGACTT 57.056 29.630 25.42 11.66 36.23 3.01
3316 4105 9.555727 TTGTACTAAAGATGCTTTAGACTTTGT 57.444 29.630 25.42 11.18 36.23 2.83
3317 4106 9.555727 TGTACTAAAGATGCTTTAGACTTTGTT 57.444 29.630 25.42 10.05 36.23 2.83
3319 4108 7.797819 ACTAAAGATGCTTTAGACTTTGTTCG 58.202 34.615 25.42 4.68 36.23 3.95
3320 4109 5.613358 AAGATGCTTTAGACTTTGTTCGG 57.387 39.130 0.00 0.00 0.00 4.30
3321 4110 4.642429 AGATGCTTTAGACTTTGTTCGGT 58.358 39.130 0.00 0.00 0.00 4.69
3322 4111 5.063880 AGATGCTTTAGACTTTGTTCGGTT 58.936 37.500 0.00 0.00 0.00 4.44
3323 4112 6.228258 AGATGCTTTAGACTTTGTTCGGTTA 58.772 36.000 0.00 0.00 0.00 2.85
3324 4113 5.662211 TGCTTTAGACTTTGTTCGGTTAC 57.338 39.130 0.00 0.00 0.00 2.50
3325 4114 5.117584 TGCTTTAGACTTTGTTCGGTTACA 58.882 37.500 0.00 0.00 0.00 2.41
3326 4115 5.006941 TGCTTTAGACTTTGTTCGGTTACAC 59.993 40.000 0.00 0.00 0.00 2.90
3327 4116 5.559608 GCTTTAGACTTTGTTCGGTTACACC 60.560 44.000 0.00 0.00 34.05 4.16
3328 4117 3.832615 AGACTTTGTTCGGTTACACCT 57.167 42.857 0.00 0.00 35.66 4.00
3329 4118 3.725490 AGACTTTGTTCGGTTACACCTC 58.275 45.455 0.00 0.00 35.66 3.85
3330 4119 2.804527 GACTTTGTTCGGTTACACCTCC 59.195 50.000 0.00 0.00 35.66 4.30
3331 4120 2.436911 ACTTTGTTCGGTTACACCTCCT 59.563 45.455 0.00 0.00 35.66 3.69
3332 4121 2.825861 TTGTTCGGTTACACCTCCTC 57.174 50.000 0.00 0.00 35.66 3.71
3333 4122 1.707106 TGTTCGGTTACACCTCCTCA 58.293 50.000 0.00 0.00 35.66 3.86
3334 4123 1.342174 TGTTCGGTTACACCTCCTCAC 59.658 52.381 0.00 0.00 35.66 3.51
3335 4124 1.342174 GTTCGGTTACACCTCCTCACA 59.658 52.381 0.00 0.00 35.66 3.58
3336 4125 1.254026 TCGGTTACACCTCCTCACAG 58.746 55.000 0.00 0.00 35.66 3.66
3337 4126 0.246635 CGGTTACACCTCCTCACAGG 59.753 60.000 0.00 0.00 35.66 4.00
3338 4127 0.613777 GGTTACACCTCCTCACAGGG 59.386 60.000 0.00 0.00 37.96 4.45
3339 4128 0.613777 GTTACACCTCCTCACAGGGG 59.386 60.000 0.00 0.00 43.56 4.79
3345 4134 1.918253 CTCCTCACAGGGGGATTGG 59.082 63.158 0.00 0.00 35.59 3.16
3346 4135 1.619363 TCCTCACAGGGGGATTGGG 60.619 63.158 0.00 0.00 35.59 4.12
3347 4136 2.693871 CCTCACAGGGGGATTGGGG 61.694 68.421 0.00 0.00 0.00 4.96
3348 4137 1.930656 CTCACAGGGGGATTGGGGT 60.931 63.158 0.00 0.00 0.00 4.95
3349 4138 2.215451 CTCACAGGGGGATTGGGGTG 62.215 65.000 0.00 0.00 0.00 4.61
3350 4139 2.946650 ACAGGGGGATTGGGGTGG 60.947 66.667 0.00 0.00 0.00 4.61
3351 4140 2.616893 CAGGGGGATTGGGGTGGA 60.617 66.667 0.00 0.00 0.00 4.02
3352 4141 2.014550 CAGGGGGATTGGGGTGGAT 61.015 63.158 0.00 0.00 0.00 3.41
3353 4142 1.230956 AGGGGGATTGGGGTGGATT 60.231 57.895 0.00 0.00 0.00 3.01
3354 4143 1.075301 GGGGGATTGGGGTGGATTG 60.075 63.158 0.00 0.00 0.00 2.67
3355 4144 1.075301 GGGGATTGGGGTGGATTGG 60.075 63.158 0.00 0.00 0.00 3.16
3356 4145 1.589399 GGGGATTGGGGTGGATTGGA 61.589 60.000 0.00 0.00 0.00 3.53
3357 4146 0.106015 GGGATTGGGGTGGATTGGAG 60.106 60.000 0.00 0.00 0.00 3.86
3358 4147 0.106015 GGATTGGGGTGGATTGGAGG 60.106 60.000 0.00 0.00 0.00 4.30
3359 4148 0.926293 GATTGGGGTGGATTGGAGGA 59.074 55.000 0.00 0.00 0.00 3.71
3360 4149 0.929244 ATTGGGGTGGATTGGAGGAG 59.071 55.000 0.00 0.00 0.00 3.69
3361 4150 1.214305 TTGGGGTGGATTGGAGGAGG 61.214 60.000 0.00 0.00 0.00 4.30
3362 4151 1.619669 GGGGTGGATTGGAGGAGGT 60.620 63.158 0.00 0.00 0.00 3.85
3363 4152 1.214992 GGGGTGGATTGGAGGAGGTT 61.215 60.000 0.00 0.00 0.00 3.50
3364 4153 0.704664 GGGTGGATTGGAGGAGGTTT 59.295 55.000 0.00 0.00 0.00 3.27
3365 4154 1.077169 GGGTGGATTGGAGGAGGTTTT 59.923 52.381 0.00 0.00 0.00 2.43
3366 4155 2.171003 GGTGGATTGGAGGAGGTTTTG 58.829 52.381 0.00 0.00 0.00 2.44
3367 4156 2.225017 GGTGGATTGGAGGAGGTTTTGA 60.225 50.000 0.00 0.00 0.00 2.69
3368 4157 2.820197 GTGGATTGGAGGAGGTTTTGAC 59.180 50.000 0.00 0.00 0.00 3.18
3369 4158 2.716424 TGGATTGGAGGAGGTTTTGACT 59.284 45.455 0.00 0.00 0.00 3.41
3370 4159 3.140144 TGGATTGGAGGAGGTTTTGACTT 59.860 43.478 0.00 0.00 0.00 3.01
3371 4160 3.507622 GGATTGGAGGAGGTTTTGACTTG 59.492 47.826 0.00 0.00 0.00 3.16
3372 4161 3.662759 TTGGAGGAGGTTTTGACTTGT 57.337 42.857 0.00 0.00 0.00 3.16
3373 4162 4.781775 TTGGAGGAGGTTTTGACTTGTA 57.218 40.909 0.00 0.00 0.00 2.41
3374 4163 4.351874 TGGAGGAGGTTTTGACTTGTAG 57.648 45.455 0.00 0.00 0.00 2.74
3375 4164 3.971305 TGGAGGAGGTTTTGACTTGTAGA 59.029 43.478 0.00 0.00 0.00 2.59
3376 4165 4.040461 TGGAGGAGGTTTTGACTTGTAGAG 59.960 45.833 0.00 0.00 0.00 2.43
3377 4166 4.563786 GGAGGAGGTTTTGACTTGTAGAGG 60.564 50.000 0.00 0.00 0.00 3.69
3378 4167 3.328050 AGGAGGTTTTGACTTGTAGAGGG 59.672 47.826 0.00 0.00 0.00 4.30
3379 4168 3.072622 GGAGGTTTTGACTTGTAGAGGGT 59.927 47.826 0.00 0.00 0.00 4.34
3380 4169 4.065789 GAGGTTTTGACTTGTAGAGGGTG 58.934 47.826 0.00 0.00 0.00 4.61
3381 4170 3.458487 AGGTTTTGACTTGTAGAGGGTGT 59.542 43.478 0.00 0.00 0.00 4.16
3382 4171 4.657039 AGGTTTTGACTTGTAGAGGGTGTA 59.343 41.667 0.00 0.00 0.00 2.90
3383 4172 5.131475 AGGTTTTGACTTGTAGAGGGTGTAA 59.869 40.000 0.00 0.00 0.00 2.41
3384 4173 6.002082 GGTTTTGACTTGTAGAGGGTGTAAT 58.998 40.000 0.00 0.00 0.00 1.89
3385 4174 6.148976 GGTTTTGACTTGTAGAGGGTGTAATC 59.851 42.308 0.00 0.00 0.00 1.75
3386 4175 5.416271 TTGACTTGTAGAGGGTGTAATCC 57.584 43.478 0.00 0.00 0.00 3.01
3394 4183 3.924576 GGGTGTAATCCCTGCCAAT 57.075 52.632 0.00 0.00 43.85 3.16
3395 4184 1.692411 GGGTGTAATCCCTGCCAATC 58.308 55.000 0.00 0.00 43.85 2.67
3396 4185 1.692411 GGTGTAATCCCTGCCAATCC 58.308 55.000 0.00 0.00 0.00 3.01
3397 4186 1.692411 GTGTAATCCCTGCCAATCCC 58.308 55.000 0.00 0.00 0.00 3.85
3398 4187 1.215423 GTGTAATCCCTGCCAATCCCT 59.785 52.381 0.00 0.00 0.00 4.20
3399 4188 1.215173 TGTAATCCCTGCCAATCCCTG 59.785 52.381 0.00 0.00 0.00 4.45
3400 4189 0.185901 TAATCCCTGCCAATCCCTGC 59.814 55.000 0.00 0.00 0.00 4.85
3401 4190 2.594365 AATCCCTGCCAATCCCTGCC 62.594 60.000 0.00 0.00 0.00 4.85
3402 4191 4.064768 CCCTGCCAATCCCTGCCA 62.065 66.667 0.00 0.00 0.00 4.92
3403 4192 2.037687 CCTGCCAATCCCTGCCAA 59.962 61.111 0.00 0.00 0.00 4.52
3404 4193 1.610086 CCTGCCAATCCCTGCCAAA 60.610 57.895 0.00 0.00 0.00 3.28
3405 4194 1.593265 CTGCCAATCCCTGCCAAAC 59.407 57.895 0.00 0.00 0.00 2.93
3406 4195 1.891722 CTGCCAATCCCTGCCAAACC 61.892 60.000 0.00 0.00 0.00 3.27
3407 4196 2.659063 GCCAATCCCTGCCAAACCC 61.659 63.158 0.00 0.00 0.00 4.11
3408 4197 1.989508 CCAATCCCTGCCAAACCCC 60.990 63.158 0.00 0.00 0.00 4.95
3409 4198 1.079073 CAATCCCTGCCAAACCCCT 59.921 57.895 0.00 0.00 0.00 4.79
3410 4199 0.972471 CAATCCCTGCCAAACCCCTC 60.972 60.000 0.00 0.00 0.00 4.30
3411 4200 2.168272 AATCCCTGCCAAACCCCTCC 62.168 60.000 0.00 0.00 0.00 4.30
3412 4201 3.589542 CCCTGCCAAACCCCTCCA 61.590 66.667 0.00 0.00 0.00 3.86
3413 4202 2.772924 CCTGCCAAACCCCTCCAT 59.227 61.111 0.00 0.00 0.00 3.41
3414 4203 1.079073 CCTGCCAAACCCCTCCATT 59.921 57.895 0.00 0.00 0.00 3.16
3415 4204 0.545071 CCTGCCAAACCCCTCCATTT 60.545 55.000 0.00 0.00 0.00 2.32
3416 4205 1.351076 CTGCCAAACCCCTCCATTTT 58.649 50.000 0.00 0.00 0.00 1.82
3417 4206 1.276138 CTGCCAAACCCCTCCATTTTC 59.724 52.381 0.00 0.00 0.00 2.29
3418 4207 0.613260 GCCAAACCCCTCCATTTTCC 59.387 55.000 0.00 0.00 0.00 3.13
3419 4208 1.275666 CCAAACCCCTCCATTTTCCC 58.724 55.000 0.00 0.00 0.00 3.97
3420 4209 1.203300 CCAAACCCCTCCATTTTCCCT 60.203 52.381 0.00 0.00 0.00 4.20
3421 4210 1.901833 CAAACCCCTCCATTTTCCCTG 59.098 52.381 0.00 0.00 0.00 4.45
3422 4211 1.167033 AACCCCTCCATTTTCCCTGT 58.833 50.000 0.00 0.00 0.00 4.00
3423 4212 0.704664 ACCCCTCCATTTTCCCTGTC 59.295 55.000 0.00 0.00 0.00 3.51
3424 4213 0.704076 CCCCTCCATTTTCCCTGTCA 59.296 55.000 0.00 0.00 0.00 3.58
3425 4214 1.077005 CCCCTCCATTTTCCCTGTCAA 59.923 52.381 0.00 0.00 0.00 3.18
3426 4215 2.171003 CCCTCCATTTTCCCTGTCAAC 58.829 52.381 0.00 0.00 0.00 3.18
3427 4216 2.171003 CCTCCATTTTCCCTGTCAACC 58.829 52.381 0.00 0.00 0.00 3.77
3428 4217 1.812571 CTCCATTTTCCCTGTCAACCG 59.187 52.381 0.00 0.00 0.00 4.44
3429 4218 1.422024 TCCATTTTCCCTGTCAACCGA 59.578 47.619 0.00 0.00 0.00 4.69
3430 4219 2.158593 TCCATTTTCCCTGTCAACCGAA 60.159 45.455 0.00 0.00 0.00 4.30
3431 4220 2.030274 CCATTTTCCCTGTCAACCGAAC 60.030 50.000 0.00 0.00 0.00 3.95
3432 4221 2.421751 TTTTCCCTGTCAACCGAACA 57.578 45.000 0.00 0.00 0.00 3.18
3433 4222 1.961793 TTTCCCTGTCAACCGAACAG 58.038 50.000 0.00 0.00 43.04 3.16
3436 4225 3.655481 CTGTCAACCGAACAGGCC 58.345 61.111 0.00 0.00 46.52 5.19
3437 4226 1.966451 CTGTCAACCGAACAGGCCC 60.966 63.158 0.00 0.00 46.52 5.80
3438 4227 2.397413 CTGTCAACCGAACAGGCCCT 62.397 60.000 0.00 0.00 46.52 5.19
3439 4228 1.228154 GTCAACCGAACAGGCCCTT 60.228 57.895 0.00 0.00 46.52 3.95
3440 4229 1.072505 TCAACCGAACAGGCCCTTC 59.927 57.895 0.00 0.00 46.52 3.46
3935 5024 6.266103 TCAGTTTGAGAATTTCTTGGCAGAAT 59.734 34.615 0.00 0.00 38.89 2.40
3941 5030 6.599244 TGAGAATTTCTTGGCAGAATATTCGT 59.401 34.615 9.78 0.00 38.89 3.85
4071 5160 9.886132 ATAAGACCGTTTAGATCATTACTTTGT 57.114 29.630 0.00 0.00 0.00 2.83
4072 5161 7.596749 AGACCGTTTAGATCATTACTTTGTG 57.403 36.000 0.00 0.00 0.00 3.33
4073 5162 7.159372 AGACCGTTTAGATCATTACTTTGTGT 58.841 34.615 0.00 0.00 0.00 3.72
4074 5163 7.660208 AGACCGTTTAGATCATTACTTTGTGTT 59.340 33.333 0.00 0.00 0.00 3.32
4075 5164 8.161699 ACCGTTTAGATCATTACTTTGTGTTT 57.838 30.769 0.00 0.00 0.00 2.83
4076 5165 8.287503 ACCGTTTAGATCATTACTTTGTGTTTC 58.712 33.333 0.00 0.00 0.00 2.78
4191 5297 7.913297 TCGATTTTAATGCCTTATTTGTGCTAC 59.087 33.333 0.00 0.00 0.00 3.58
4272 5378 4.040047 TCAGAGCAAATTAGGGATCCTCA 58.960 43.478 12.58 0.00 34.61 3.86
4460 5575 4.950205 TCCCGGTCATATCCTAGTTTTC 57.050 45.455 0.00 0.00 0.00 2.29
4626 5824 6.017852 GCTGGAACAAATTACTATGTAGCCTC 60.018 42.308 0.00 0.00 38.70 4.70
4642 5840 2.014857 GCCTCCCGGAACAAATTCTAC 58.985 52.381 0.73 0.00 34.98 2.59
4801 5999 5.833406 ATATCATCGTGTTCATTTTGGCA 57.167 34.783 0.00 0.00 0.00 4.92
4815 6013 6.703319 TCATTTTGGCATTTGTTCATCTGAT 58.297 32.000 0.00 0.00 0.00 2.90
4940 6138 7.436970 CACTACAACAATGTTTAAAAAGGGTCC 59.563 37.037 0.00 0.00 41.05 4.46
5055 6267 1.523154 GCTGTTTGCAACCCGGATCA 61.523 55.000 0.73 0.00 42.31 2.92
5067 6279 1.475751 CCCGGATCAGCACTGCTAATT 60.476 52.381 0.73 0.00 36.40 1.40
5133 6351 1.714794 CTCACGTGCCTTTCTTCGAT 58.285 50.000 11.67 0.00 0.00 3.59
5155 6375 8.651389 TCGATATTTACAAATCCATTCTCTCCT 58.349 33.333 0.00 0.00 0.00 3.69
5157 6377 9.225436 GATATTTACAAATCCATTCTCTCCTCC 57.775 37.037 0.00 0.00 0.00 4.30
5159 6379 3.468850 ACAAATCCATTCTCTCCTCCCT 58.531 45.455 0.00 0.00 0.00 4.20
5169 6389 2.115427 CTCTCCTCCCTTCCTTTCTCC 58.885 57.143 0.00 0.00 0.00 3.71
5172 6392 3.035363 CTCCTCCCTTCCTTTCTCCTAC 58.965 54.545 0.00 0.00 0.00 3.18
5174 6394 2.769095 CCTCCCTTCCTTTCTCCTACAG 59.231 54.545 0.00 0.00 0.00 2.74
5176 6396 3.841255 CTCCCTTCCTTTCTCCTACAGTT 59.159 47.826 0.00 0.00 0.00 3.16
5177 6397 4.240323 TCCCTTCCTTTCTCCTACAGTTT 58.760 43.478 0.00 0.00 0.00 2.66
5190 6418 1.507140 ACAGTTTGGTGAGGTGAGGA 58.493 50.000 0.00 0.00 0.00 3.71
5196 6424 1.539124 GGTGAGGTGAGGAAGGGGT 60.539 63.158 0.00 0.00 0.00 4.95
5197 6425 0.252558 GGTGAGGTGAGGAAGGGGTA 60.253 60.000 0.00 0.00 0.00 3.69
5199 6427 0.790993 TGAGGTGAGGAAGGGGTACT 59.209 55.000 0.00 0.00 0.00 2.73
5200 6428 1.273098 TGAGGTGAGGAAGGGGTACTC 60.273 57.143 0.00 0.00 37.77 2.59
5202 6430 0.614134 GGTGAGGAAGGGGTACTCGT 60.614 60.000 0.00 0.00 40.61 4.18
5222 6452 7.760437 ACTCGTTCTCCTGTTTATTACTACTC 58.240 38.462 0.00 0.00 0.00 2.59
5223 6453 7.093322 TCGTTCTCCTGTTTATTACTACTCC 57.907 40.000 0.00 0.00 0.00 3.85
5224 6454 6.096001 TCGTTCTCCTGTTTATTACTACTCCC 59.904 42.308 0.00 0.00 0.00 4.30
5225 6455 6.096564 CGTTCTCCTGTTTATTACTACTCCCT 59.903 42.308 0.00 0.00 0.00 4.20
5226 6456 7.490840 GTTCTCCTGTTTATTACTACTCCCTC 58.509 42.308 0.00 0.00 0.00 4.30
5227 6457 6.982899 TCTCCTGTTTATTACTACTCCCTCT 58.017 40.000 0.00 0.00 0.00 3.69
5228 6458 6.834451 TCTCCTGTTTATTACTACTCCCTCTG 59.166 42.308 0.00 0.00 0.00 3.35
5229 6459 6.500336 TCCTGTTTATTACTACTCCCTCTGT 58.500 40.000 0.00 0.00 0.00 3.41
5230 6460 6.958192 TCCTGTTTATTACTACTCCCTCTGTT 59.042 38.462 0.00 0.00 0.00 3.16
5231 6461 7.123847 TCCTGTTTATTACTACTCCCTCTGTTC 59.876 40.741 0.00 0.00 0.00 3.18
5232 6462 6.860080 TGTTTATTACTACTCCCTCTGTTCG 58.140 40.000 0.00 0.00 0.00 3.95
5233 6463 6.127535 TGTTTATTACTACTCCCTCTGTTCGG 60.128 42.308 0.00 0.00 0.00 4.30
5234 6464 3.726557 TTACTACTCCCTCTGTTCGGA 57.273 47.619 0.00 0.00 0.00 4.55
5235 6465 2.599408 ACTACTCCCTCTGTTCGGAA 57.401 50.000 0.00 0.00 0.00 4.30
5236 6466 3.103080 ACTACTCCCTCTGTTCGGAAT 57.897 47.619 0.00 0.00 0.00 3.01
5237 6467 3.442076 ACTACTCCCTCTGTTCGGAATT 58.558 45.455 0.00 0.00 0.00 2.17
5238 6468 4.607239 ACTACTCCCTCTGTTCGGAATTA 58.393 43.478 0.00 0.00 0.00 1.40
5239 6469 3.889520 ACTCCCTCTGTTCGGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
5240 6470 3.442076 ACTCCCTCTGTTCGGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
5241 6471 3.838903 ACTCCCTCTGTTCGGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
5242 6472 4.184629 CTCCCTCTGTTCGGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
5243 6473 3.581332 TCCCTCTGTTCGGAATTACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
5244 6474 3.933332 CCCTCTGTTCGGAATTACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
5245 6475 4.322801 CCCTCTGTTCGGAATTACTTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
5246 6476 4.865365 CCTCTGTTCGGAATTACTTGTCTC 59.135 45.833 0.00 0.00 0.00 3.36
5247 6477 4.482386 TCTGTTCGGAATTACTTGTCTCG 58.518 43.478 0.00 0.00 0.00 4.04
5248 6478 3.581755 TGTTCGGAATTACTTGTCTCGG 58.418 45.455 0.00 0.00 0.00 4.63
5249 6479 3.256383 TGTTCGGAATTACTTGTCTCGGA 59.744 43.478 0.00 0.00 0.00 4.55
5250 6480 4.081862 TGTTCGGAATTACTTGTCTCGGAT 60.082 41.667 0.00 0.00 0.00 4.18
5251 6481 5.125900 TGTTCGGAATTACTTGTCTCGGATA 59.874 40.000 0.00 0.00 0.00 2.59
5252 6482 6.183360 TGTTCGGAATTACTTGTCTCGGATAT 60.183 38.462 0.00 0.00 0.00 1.63
5253 6483 5.769367 TCGGAATTACTTGTCTCGGATATG 58.231 41.667 0.00 0.00 0.00 1.78
5254 6484 4.923871 CGGAATTACTTGTCTCGGATATGG 59.076 45.833 0.00 0.00 0.00 2.74
5255 6485 5.278808 CGGAATTACTTGTCTCGGATATGGA 60.279 44.000 0.00 0.00 0.00 3.41
5256 6486 6.572509 CGGAATTACTTGTCTCGGATATGGAT 60.573 42.308 0.00 0.00 0.00 3.41
5257 6487 6.591834 GGAATTACTTGTCTCGGATATGGATG 59.408 42.308 0.00 0.00 0.00 3.51
5258 6488 6.672266 ATTACTTGTCTCGGATATGGATGT 57.328 37.500 0.00 0.00 0.00 3.06
5259 6489 7.776618 ATTACTTGTCTCGGATATGGATGTA 57.223 36.000 0.00 0.00 0.00 2.29
5260 6490 7.776618 TTACTTGTCTCGGATATGGATGTAT 57.223 36.000 0.00 0.00 0.00 2.29
5261 6491 6.274157 ACTTGTCTCGGATATGGATGTATC 57.726 41.667 0.00 0.00 0.00 2.24
5262 6492 6.013379 ACTTGTCTCGGATATGGATGTATCT 58.987 40.000 0.00 0.00 32.78 1.98
5263 6493 7.175797 ACTTGTCTCGGATATGGATGTATCTA 58.824 38.462 0.00 0.00 32.78 1.98
5264 6494 7.338196 ACTTGTCTCGGATATGGATGTATCTAG 59.662 40.741 0.00 0.00 32.78 2.43
5265 6495 6.958767 TGTCTCGGATATGGATGTATCTAGA 58.041 40.000 0.00 0.00 32.78 2.43
5266 6496 7.402862 TGTCTCGGATATGGATGTATCTAGAA 58.597 38.462 0.00 0.00 31.35 2.10
5267 6497 7.337184 TGTCTCGGATATGGATGTATCTAGAAC 59.663 40.741 0.00 0.00 31.35 3.01
5268 6498 7.554835 GTCTCGGATATGGATGTATCTAGAACT 59.445 40.741 0.00 0.00 31.35 3.01
5269 6499 8.769359 TCTCGGATATGGATGTATCTAGAACTA 58.231 37.037 0.00 0.00 32.78 2.24
5270 6500 9.397280 CTCGGATATGGATGTATCTAGAACTAA 57.603 37.037 0.00 0.00 32.78 2.24
5271 6501 9.749340 TCGGATATGGATGTATCTAGAACTAAA 57.251 33.333 0.00 0.00 32.78 1.85
5298 6528 7.194607 ACATCTAGATACATCCATTTTTGCG 57.805 36.000 4.54 0.00 0.00 4.85
5299 6529 6.992123 ACATCTAGATACATCCATTTTTGCGA 59.008 34.615 4.54 0.00 0.00 5.10
5300 6530 6.844696 TCTAGATACATCCATTTTTGCGAC 57.155 37.500 0.00 0.00 0.00 5.19
5301 6531 6.345298 TCTAGATACATCCATTTTTGCGACA 58.655 36.000 0.00 0.00 0.00 4.35
5302 6532 5.895636 AGATACATCCATTTTTGCGACAA 57.104 34.783 0.00 0.00 0.00 3.18
5303 6533 5.883661 AGATACATCCATTTTTGCGACAAG 58.116 37.500 0.00 0.00 0.00 3.16
5304 6534 5.415701 AGATACATCCATTTTTGCGACAAGT 59.584 36.000 0.00 0.00 0.00 3.16
5305 6535 6.597672 AGATACATCCATTTTTGCGACAAGTA 59.402 34.615 0.00 0.00 0.00 2.24
5306 6536 5.446143 ACATCCATTTTTGCGACAAGTAA 57.554 34.783 0.00 0.00 0.00 2.24
5307 6537 6.024552 ACATCCATTTTTGCGACAAGTAAT 57.975 33.333 0.00 0.00 0.00 1.89
5308 6538 6.454795 ACATCCATTTTTGCGACAAGTAATT 58.545 32.000 0.00 0.00 0.00 1.40
5309 6539 6.586082 ACATCCATTTTTGCGACAAGTAATTC 59.414 34.615 0.00 0.00 0.00 2.17
5310 6540 5.465935 TCCATTTTTGCGACAAGTAATTCC 58.534 37.500 0.00 0.00 0.00 3.01
5311 6541 4.323336 CCATTTTTGCGACAAGTAATTCCG 59.677 41.667 0.00 0.00 0.00 4.30
5312 6542 4.815040 TTTTTGCGACAAGTAATTCCGA 57.185 36.364 0.00 0.00 0.00 4.55
5313 6543 4.815040 TTTTGCGACAAGTAATTCCGAA 57.185 36.364 0.00 0.00 0.00 4.30
5314 6544 3.799137 TTGCGACAAGTAATTCCGAAC 57.201 42.857 0.00 0.00 0.00 3.95
5315 6545 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
5316 6546 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
5317 6547 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
5318 6548 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
5319 6549 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5320 6550 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5321 6551 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5322 6552 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5323 6553 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
5324 6554 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
5325 6555 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
5326 6556 0.038744 TTCCGAACGGAGGGAGTACT 59.961 55.000 15.34 0.00 46.06 2.73
5327 6557 0.038744 TCCGAACGGAGGGAGTACTT 59.961 55.000 12.04 0.00 39.76 2.24
5328 6558 0.455005 CCGAACGGAGGGAGTACTTC 59.545 60.000 7.53 0.00 37.50 3.01
5329 6559 0.098376 CGAACGGAGGGAGTACTTCG 59.902 60.000 0.00 0.00 44.95 3.79
5332 6562 3.715854 CGGAGGGAGTACTTCGTTG 57.284 57.895 0.00 0.00 34.78 4.10
5333 6563 0.458025 CGGAGGGAGTACTTCGTTGC 60.458 60.000 0.00 0.00 34.78 4.17
5334 6564 0.606604 GGAGGGAGTACTTCGTTGCA 59.393 55.000 0.00 0.00 0.00 4.08
5335 6565 1.672145 GGAGGGAGTACTTCGTTGCAC 60.672 57.143 0.00 0.00 0.00 4.57
5336 6566 1.000506 GAGGGAGTACTTCGTTGCACA 59.999 52.381 0.00 0.00 0.00 4.57
5337 6567 1.414919 AGGGAGTACTTCGTTGCACAA 59.585 47.619 0.00 0.00 0.00 3.33
5338 6568 2.038557 AGGGAGTACTTCGTTGCACAAT 59.961 45.455 0.00 0.00 0.00 2.71
5339 6569 2.159627 GGGAGTACTTCGTTGCACAATG 59.840 50.000 0.00 0.00 0.00 2.82
5340 6570 2.806244 GGAGTACTTCGTTGCACAATGT 59.194 45.455 0.00 0.00 0.00 2.71
5341 6571 3.250040 GGAGTACTTCGTTGCACAATGTT 59.750 43.478 0.00 0.00 0.00 2.71
5342 6572 4.449743 GGAGTACTTCGTTGCACAATGTTA 59.550 41.667 0.00 0.00 0.00 2.41
5343 6573 5.389516 GGAGTACTTCGTTGCACAATGTTAG 60.390 44.000 0.00 4.76 0.00 2.34
5344 6574 5.294356 AGTACTTCGTTGCACAATGTTAGA 58.706 37.500 2.72 0.00 0.00 2.10
5345 6575 4.468095 ACTTCGTTGCACAATGTTAGAC 57.532 40.909 2.72 0.00 0.00 2.59
5346 6576 3.874543 ACTTCGTTGCACAATGTTAGACA 59.125 39.130 2.72 0.00 0.00 3.41
5347 6577 4.515191 ACTTCGTTGCACAATGTTAGACAT 59.485 37.500 2.72 0.00 41.31 3.06
5349 6579 5.431420 TCGTTGCACAATGTTAGACATTT 57.569 34.783 3.69 0.00 45.80 2.32
5350 6580 5.826586 TCGTTGCACAATGTTAGACATTTT 58.173 33.333 3.69 0.00 45.80 1.82
5351 6581 6.269315 TCGTTGCACAATGTTAGACATTTTT 58.731 32.000 3.69 0.00 45.80 1.94
5352 6582 6.198029 TCGTTGCACAATGTTAGACATTTTTG 59.802 34.615 3.69 5.89 45.80 2.44
5353 6583 5.903764 TGCACAATGTTAGACATTTTTGC 57.096 34.783 20.15 20.15 45.80 3.68
5354 6584 5.903764 GCACAATGTTAGACATTTTTGCA 57.096 34.783 21.15 0.00 45.80 4.08
5355 6585 6.284475 GCACAATGTTAGACATTTTTGCAA 57.716 33.333 21.15 0.00 45.80 4.08
5356 6586 6.357198 GCACAATGTTAGACATTTTTGCAAG 58.643 36.000 21.15 7.45 45.80 4.01
5357 6587 6.357198 CACAATGTTAGACATTTTTGCAAGC 58.643 36.000 0.00 0.00 45.80 4.01
5358 6588 5.175491 ACAATGTTAGACATTTTTGCAAGCG 59.825 36.000 0.00 0.00 45.80 4.68
5359 6589 4.560136 TGTTAGACATTTTTGCAAGCGA 57.440 36.364 0.00 0.00 0.00 4.93
5360 6590 5.119931 TGTTAGACATTTTTGCAAGCGAT 57.880 34.783 0.00 0.00 0.00 4.58
5361 6591 4.916831 TGTTAGACATTTTTGCAAGCGATG 59.083 37.500 13.79 13.79 0.00 3.84
5362 6592 3.648339 AGACATTTTTGCAAGCGATGT 57.352 38.095 18.42 18.42 33.93 3.06
5363 6593 3.981211 AGACATTTTTGCAAGCGATGTT 58.019 36.364 19.02 10.64 31.59 2.71
5364 6594 5.119931 AGACATTTTTGCAAGCGATGTTA 57.880 34.783 19.02 0.00 31.59 2.41
5365 6595 5.156355 AGACATTTTTGCAAGCGATGTTAG 58.844 37.500 19.02 1.73 31.59 2.34
5366 6596 3.674753 ACATTTTTGCAAGCGATGTTAGC 59.325 39.130 14.76 0.00 0.00 3.09
5377 6607 5.682943 AGCGATGTTAGCTTGTAAAAACA 57.317 34.783 0.00 0.00 43.24 2.83
5378 6608 6.254281 AGCGATGTTAGCTTGTAAAAACAT 57.746 33.333 9.49 9.49 43.24 2.71
5379 6609 6.677913 AGCGATGTTAGCTTGTAAAAACATT 58.322 32.000 10.74 0.00 43.24 2.71
5380 6610 7.145323 AGCGATGTTAGCTTGTAAAAACATTT 58.855 30.769 10.74 0.29 43.24 2.32
5381 6611 7.651704 AGCGATGTTAGCTTGTAAAAACATTTT 59.348 29.630 10.74 0.01 43.24 1.82
5382 6612 8.907685 GCGATGTTAGCTTGTAAAAACATTTTA 58.092 29.630 10.74 0.00 41.37 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 3.031495 GATCAGCGGATCGGACGA 58.969 61.111 11.15 0.00 40.50 4.20
102 103 3.142393 CGCAGGGTCCCCTCTATG 58.858 66.667 3.51 0.00 46.28 2.23
183 184 3.005554 CAGAGCAACAACTCGGATGATT 58.994 45.455 0.00 0.00 41.77 2.57
229 230 0.034198 TAAGTAGCACTGGCAACGCA 59.966 50.000 10.09 0.00 44.61 5.24
232 233 4.332819 CCTAATGTAAGTAGCACTGGCAAC 59.667 45.833 0.00 0.00 44.61 4.17
238 263 7.275920 CCATTTCTCCTAATGTAAGTAGCACT 58.724 38.462 0.00 0.00 32.12 4.40
261 286 4.675303 CTCCTCCCCACCCACCCA 62.675 72.222 0.00 0.00 0.00 4.51
282 307 4.099170 CGACGTCGCCGAGGAAGT 62.099 66.667 26.59 0.00 37.88 3.01
418 443 1.137825 CTGCTTCTCCGTCGTCCTC 59.862 63.158 0.00 0.00 0.00 3.71
515 540 2.695970 CCTCCTCCTCCTCCCTCGT 61.696 68.421 0.00 0.00 0.00 4.18
771 802 0.034477 CCAACTGGCCCTTAACGGAT 60.034 55.000 0.00 0.00 33.16 4.18
853 884 1.300233 CCTAGGAAGCGTGCGATCC 60.300 63.158 1.05 10.55 0.00 3.36
858 889 1.810030 CGAACCCTAGGAAGCGTGC 60.810 63.158 11.48 0.00 0.00 5.34
860 891 0.245813 GAACGAACCCTAGGAAGCGT 59.754 55.000 11.48 13.29 0.00 5.07
952 983 0.109919 GGTCAATTTGGAACGGCGAC 60.110 55.000 16.62 7.14 0.00 5.19
958 989 0.526211 GGCGGAGGTCAATTTGGAAC 59.474 55.000 0.00 0.00 0.00 3.62
965 996 0.322546 GAAAGGTGGCGGAGGTCAAT 60.323 55.000 0.00 0.00 0.00 2.57
967 998 2.747686 GAAAGGTGGCGGAGGTCA 59.252 61.111 0.00 0.00 0.00 4.02
968 999 2.046217 GGAAAGGTGGCGGAGGTC 60.046 66.667 0.00 0.00 0.00 3.85
969 1000 4.016706 CGGAAAGGTGGCGGAGGT 62.017 66.667 0.00 0.00 0.00 3.85
984 1025 0.955428 CCATGGTGGACACACTTCGG 60.955 60.000 2.57 0.00 46.85 4.30
1175 1362 3.181511 CGAAGCGCTACCAATCAAATCAA 60.182 43.478 12.05 0.00 0.00 2.57
1177 1364 2.351726 ACGAAGCGCTACCAATCAAATC 59.648 45.455 12.05 0.00 0.00 2.17
1178 1365 2.351726 GACGAAGCGCTACCAATCAAAT 59.648 45.455 12.05 0.00 0.00 2.32
1179 1366 1.730064 GACGAAGCGCTACCAATCAAA 59.270 47.619 12.05 0.00 0.00 2.69
1180 1367 1.337354 TGACGAAGCGCTACCAATCAA 60.337 47.619 12.05 0.00 0.00 2.57
1244 1448 0.034896 TGGCTTCAAGGGAACGAGTC 59.965 55.000 0.00 0.00 0.00 3.36
1335 1541 5.089970 AGCATGTACATGTAAGAGCTTGA 57.910 39.130 31.10 0.00 40.80 3.02
1349 1556 6.668323 ACAAATCAACAACAGTAGCATGTAC 58.332 36.000 0.00 0.00 31.70 2.90
1364 1735 7.764443 TCCTAGTACATGCTAGAACAAATCAAC 59.236 37.037 8.49 0.00 40.54 3.18
1413 1827 1.463674 ACGAATCTGTGGGATTTGGC 58.536 50.000 9.50 0.00 45.53 4.52
1426 1846 0.719465 CGTGCACAACCCTACGAATC 59.281 55.000 18.64 0.00 38.72 2.52
1518 1938 3.505293 ACTACAACGACTCAGTCCCTTAC 59.495 47.826 0.00 0.00 0.00 2.34
1598 2169 7.865707 ACAATCAAACATAACAAGACTCTCAC 58.134 34.615 0.00 0.00 0.00 3.51
1602 2173 9.209175 ACTAGACAATCAAACATAACAAGACTC 57.791 33.333 0.00 0.00 0.00 3.36
1626 2197 2.030007 CCATGCCAACGTCATTTCAACT 60.030 45.455 0.00 0.00 0.00 3.16
1627 2198 2.327568 CCATGCCAACGTCATTTCAAC 58.672 47.619 0.00 0.00 0.00 3.18
1640 2213 0.251253 TCATCACTGTTGCCATGCCA 60.251 50.000 0.00 0.00 0.00 4.92
1754 2328 2.479560 GGAAAGGAAACACAGCACACAC 60.480 50.000 0.00 0.00 0.00 3.82
1770 2344 6.857964 CAGTAACTGTTGTGCAAATAGGAAAG 59.142 38.462 2.69 0.00 0.00 2.62
1783 2357 6.373216 ACACAAACACATACAGTAACTGTTGT 59.627 34.615 2.69 0.00 42.59 3.32
1914 2493 5.419788 CCTTGGATGTGATTTGAATCTTCCA 59.580 40.000 14.19 14.19 37.61 3.53
1969 2548 5.002516 CGGAGGGAGTACTATACGAGAAAT 58.997 45.833 0.00 0.00 0.00 2.17
1975 2554 2.421619 GGACGGAGGGAGTACTATACG 58.578 57.143 0.00 0.00 0.00 3.06
1985 2564 0.760572 AACTTTTTCGGACGGAGGGA 59.239 50.000 0.00 0.00 0.00 4.20
1986 2565 1.265905 CAAACTTTTTCGGACGGAGGG 59.734 52.381 0.00 0.00 0.00 4.30
1988 2567 2.032290 GGACAAACTTTTTCGGACGGAG 60.032 50.000 0.00 0.00 0.00 4.63
1989 2568 1.941975 GGACAAACTTTTTCGGACGGA 59.058 47.619 0.00 0.00 0.00 4.69
1990 2569 1.002142 GGGACAAACTTTTTCGGACGG 60.002 52.381 0.00 0.00 0.00 4.79
1991 2570 1.671845 TGGGACAAACTTTTTCGGACG 59.328 47.619 0.00 0.00 31.92 4.79
2000 2579 8.990142 TTGAGAGACAAGCTTGGGACAAACTT 62.990 42.308 29.18 5.75 37.48 2.66
2001 2580 7.615432 TTGAGAGACAAGCTTGGGACAAACT 62.615 44.000 29.18 16.96 37.48 2.66
2002 2581 5.460742 TTGAGAGACAAGCTTGGGACAAAC 61.461 45.833 29.18 14.35 37.48 2.93
2003 2582 3.371487 TTGAGAGACAAGCTTGGGACAAA 60.371 43.478 29.18 13.65 37.48 2.83
2004 2583 2.172505 TTGAGAGACAAGCTTGGGACAA 59.827 45.455 29.18 21.59 37.48 3.18
2005 2584 1.423584 TGAGAGACAAGCTTGGGACA 58.576 50.000 29.18 17.71 0.00 4.02
2006 2585 2.550830 TTGAGAGACAAGCTTGGGAC 57.449 50.000 29.18 19.11 34.20 4.46
2007 2586 3.415212 CATTTGAGAGACAAGCTTGGGA 58.585 45.455 29.18 7.03 39.77 4.37
2008 2587 2.490903 CCATTTGAGAGACAAGCTTGGG 59.509 50.000 29.18 13.19 39.77 4.12
2009 2588 3.415212 TCCATTTGAGAGACAAGCTTGG 58.585 45.455 29.18 12.28 39.77 3.61
2010 2589 4.458295 ACATCCATTTGAGAGACAAGCTTG 59.542 41.667 24.84 24.84 39.77 4.01
2011 2590 4.660168 ACATCCATTTGAGAGACAAGCTT 58.340 39.130 0.00 0.00 39.77 3.74
2012 2591 4.298103 ACATCCATTTGAGAGACAAGCT 57.702 40.909 0.00 0.00 39.77 3.74
2013 2592 6.054295 AGATACATCCATTTGAGAGACAAGC 58.946 40.000 0.00 0.00 39.77 4.01
2014 2593 7.384660 GCTAGATACATCCATTTGAGAGACAAG 59.615 40.741 0.00 0.00 39.77 3.16
2015 2594 7.147672 TGCTAGATACATCCATTTGAGAGACAA 60.148 37.037 0.00 0.00 36.65 3.18
2016 2595 6.324770 TGCTAGATACATCCATTTGAGAGACA 59.675 38.462 0.00 0.00 0.00 3.41
2017 2596 6.644592 GTGCTAGATACATCCATTTGAGAGAC 59.355 42.308 0.00 0.00 0.00 3.36
2018 2597 6.552725 AGTGCTAGATACATCCATTTGAGAGA 59.447 38.462 0.00 0.00 0.00 3.10
2019 2598 6.757237 AGTGCTAGATACATCCATTTGAGAG 58.243 40.000 0.00 0.00 0.00 3.20
2020 2599 6.737720 AGTGCTAGATACATCCATTTGAGA 57.262 37.500 0.00 0.00 0.00 3.27
2021 2600 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
2022 2601 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
2023 2602 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
2024 2603 8.486210 TCAAGTTAGTGCTAGATACATCCATTT 58.514 33.333 0.00 0.00 0.00 2.32
2025 2604 8.023021 TCAAGTTAGTGCTAGATACATCCATT 57.977 34.615 0.00 0.00 0.00 3.16
2026 2605 7.603180 TCAAGTTAGTGCTAGATACATCCAT 57.397 36.000 0.00 0.00 0.00 3.41
2027 2606 7.436933 CATCAAGTTAGTGCTAGATACATCCA 58.563 38.462 0.00 0.00 0.00 3.41
2028 2607 6.367422 GCATCAAGTTAGTGCTAGATACATCC 59.633 42.308 0.00 0.00 36.02 3.51
2029 2608 7.151308 AGCATCAAGTTAGTGCTAGATACATC 58.849 38.462 11.30 0.00 46.54 3.06
2030 2609 7.060383 AGCATCAAGTTAGTGCTAGATACAT 57.940 36.000 11.30 0.00 46.54 2.29
2031 2610 6.471233 AGCATCAAGTTAGTGCTAGATACA 57.529 37.500 11.30 0.00 46.54 2.29
2037 2616 7.582667 TGTATCTAGCATCAAGTTAGTGCTA 57.417 36.000 16.22 16.22 46.54 3.49
2039 2618 6.367422 GGATGTATCTAGCATCAAGTTAGTGC 59.633 42.308 9.99 4.02 43.17 4.40
2040 2619 7.436933 TGGATGTATCTAGCATCAAGTTAGTG 58.563 38.462 9.99 0.00 43.17 2.74
2041 2620 7.603180 TGGATGTATCTAGCATCAAGTTAGT 57.397 36.000 9.99 0.00 43.17 2.24
2042 2621 9.499479 AAATGGATGTATCTAGCATCAAGTTAG 57.501 33.333 9.99 0.00 43.17 2.34
2043 2622 9.276590 CAAATGGATGTATCTAGCATCAAGTTA 57.723 33.333 9.99 0.00 43.17 2.24
2044 2623 7.994911 TCAAATGGATGTATCTAGCATCAAGTT 59.005 33.333 9.99 3.16 43.17 2.66
2045 2624 7.512130 TCAAATGGATGTATCTAGCATCAAGT 58.488 34.615 9.99 0.00 43.17 3.16
2046 2625 7.876582 TCTCAAATGGATGTATCTAGCATCAAG 59.123 37.037 9.99 0.77 43.17 3.02
2047 2626 7.738847 TCTCAAATGGATGTATCTAGCATCAA 58.261 34.615 9.99 0.98 43.17 2.57
2048 2627 7.234166 TCTCTCAAATGGATGTATCTAGCATCA 59.766 37.037 9.99 0.00 43.17 3.07
2049 2628 7.545265 GTCTCTCAAATGGATGTATCTAGCATC 59.455 40.741 1.37 1.37 41.30 3.91
2050 2629 7.015974 TGTCTCTCAAATGGATGTATCTAGCAT 59.984 37.037 0.00 0.00 0.00 3.79
2051 2630 6.324770 TGTCTCTCAAATGGATGTATCTAGCA 59.675 38.462 0.00 0.00 0.00 3.49
2052 2631 6.753180 TGTCTCTCAAATGGATGTATCTAGC 58.247 40.000 0.00 0.00 0.00 3.42
2053 2632 9.775854 AATTGTCTCTCAAATGGATGTATCTAG 57.224 33.333 0.00 0.00 39.62 2.43
2055 2634 9.471702 AAAATTGTCTCTCAAATGGATGTATCT 57.528 29.630 0.00 0.00 39.62 1.98
2079 2658 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
2080 2659 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
2081 2660 1.308069 CGTACTCCCTCCGTCCGAAA 61.308 60.000 0.00 0.00 0.00 3.46
2082 2661 1.746615 CGTACTCCCTCCGTCCGAA 60.747 63.158 0.00 0.00 0.00 4.30
2083 2662 2.124983 CGTACTCCCTCCGTCCGA 60.125 66.667 0.00 0.00 0.00 4.55
2084 2663 2.437359 ACGTACTCCCTCCGTCCG 60.437 66.667 0.00 0.00 0.00 4.79
2085 2664 1.246737 AACACGTACTCCCTCCGTCC 61.247 60.000 0.00 0.00 31.46 4.79
2086 2665 0.600057 AAACACGTACTCCCTCCGTC 59.400 55.000 0.00 0.00 31.46 4.79
2087 2666 1.000171 GAAAACACGTACTCCCTCCGT 60.000 52.381 0.00 0.00 34.71 4.69
2088 2667 1.271656 AGAAAACACGTACTCCCTCCG 59.728 52.381 0.00 0.00 0.00 4.63
2089 2668 2.036862 ACAGAAAACACGTACTCCCTCC 59.963 50.000 0.00 0.00 0.00 4.30
2090 2669 3.005578 AGACAGAAAACACGTACTCCCTC 59.994 47.826 0.00 0.00 0.00 4.30
2091 2670 2.963782 AGACAGAAAACACGTACTCCCT 59.036 45.455 0.00 0.00 0.00 4.20
2092 2671 3.057734 CAGACAGAAAACACGTACTCCC 58.942 50.000 0.00 0.00 0.00 4.30
2093 2672 3.973657 TCAGACAGAAAACACGTACTCC 58.026 45.455 0.00 0.00 0.00 3.85
2094 2673 7.813852 ATAATCAGACAGAAAACACGTACTC 57.186 36.000 0.00 0.00 0.00 2.59
2095 2674 9.871238 AATATAATCAGACAGAAAACACGTACT 57.129 29.630 0.00 0.00 0.00 2.73
2129 2709 5.108385 AGCGAAATACTGGTTTTGTTGAG 57.892 39.130 0.00 0.00 0.00 3.02
2139 2735 6.309980 GTGATCAGATATGAGCGAAATACTGG 59.690 42.308 0.00 0.00 0.00 4.00
2162 2758 2.119484 TAAGGGGTGCGACCAAGGTG 62.119 60.000 0.00 0.00 41.02 4.00
2169 2765 0.674534 ATCGAGATAAGGGGTGCGAC 59.325 55.000 0.00 0.00 0.00 5.19
2214 2810 4.452795 TCAGACAGTTTCGTTCAACAACAA 59.547 37.500 0.00 0.00 32.14 2.83
2215 2811 3.997681 TCAGACAGTTTCGTTCAACAACA 59.002 39.130 0.00 0.00 32.14 3.33
2225 2822 4.686091 TCTGTAGCAATTCAGACAGTTTCG 59.314 41.667 9.02 0.00 40.19 3.46
2246 2843 6.656693 CCAAATATAAATCTTCGCCATCCTCT 59.343 38.462 0.00 0.00 0.00 3.69
2255 2852 8.388103 ACAAACGAGACCAAATATAAATCTTCG 58.612 33.333 0.00 0.00 0.00 3.79
2311 2908 5.391312 AACAGCAAACCAATAATGAGGTC 57.609 39.130 0.00 0.00 37.07 3.85
2344 2970 6.866248 AGTTTAGTTTAATCATTGGCCAAACG 59.134 34.615 24.71 16.97 34.94 3.60
2383 3009 3.993081 CCACATGAAGAGAGTTGAGACAC 59.007 47.826 0.00 0.00 0.00 3.67
2509 3136 8.902540 ACTATTTTGTTCAAGTCATCACAGTA 57.097 30.769 0.00 0.00 0.00 2.74
2718 3351 9.147732 TCTTTATATGCATCAGAAGTAGGAAGA 57.852 33.333 0.19 0.00 0.00 2.87
2820 3461 4.541973 TGTCAATCAGCACAGATACACT 57.458 40.909 0.00 0.00 0.00 3.55
2909 3553 4.273148 ACTCACACCAGTTAATGAGGAC 57.727 45.455 6.49 0.00 42.39 3.85
3194 3858 2.616256 CCCACTCACTGCAAGATAGCAA 60.616 50.000 0.00 0.00 45.13 3.91
3203 3867 2.353704 CGTCTTATTCCCACTCACTGCA 60.354 50.000 0.00 0.00 0.00 4.41
3319 4108 0.613777 CCCTGTGAGGAGGTGTAACC 59.386 60.000 0.00 0.00 45.56 2.85
3320 4109 0.613777 CCCCTGTGAGGAGGTGTAAC 59.386 60.000 0.00 0.00 37.67 2.50
3321 4110 0.546747 CCCCCTGTGAGGAGGTGTAA 60.547 60.000 0.00 0.00 37.67 2.41
3322 4111 1.080354 CCCCCTGTGAGGAGGTGTA 59.920 63.158 0.00 0.00 37.67 2.90
3323 4112 2.125066 ATCCCCCTGTGAGGAGGTGT 62.125 60.000 0.00 0.00 37.67 4.16
3324 4113 0.916358 AATCCCCCTGTGAGGAGGTG 60.916 60.000 0.00 0.00 37.67 4.00
3325 4114 0.916358 CAATCCCCCTGTGAGGAGGT 60.916 60.000 0.00 0.00 37.67 3.85
3326 4115 1.639635 CCAATCCCCCTGTGAGGAGG 61.640 65.000 0.00 0.00 37.67 4.30
3327 4116 1.639635 CCCAATCCCCCTGTGAGGAG 61.640 65.000 0.00 0.00 37.67 3.69
3328 4117 1.619363 CCCAATCCCCCTGTGAGGA 60.619 63.158 0.00 0.00 37.67 3.71
3329 4118 2.693871 CCCCAATCCCCCTGTGAGG 61.694 68.421 0.00 0.00 34.30 3.86
3330 4119 1.930656 ACCCCAATCCCCCTGTGAG 60.931 63.158 0.00 0.00 0.00 3.51
3331 4120 2.212761 ACCCCAATCCCCCTGTGA 59.787 61.111 0.00 0.00 0.00 3.58
3332 4121 2.360191 CACCCCAATCCCCCTGTG 59.640 66.667 0.00 0.00 0.00 3.66
3333 4122 2.823662 ATCCACCCCAATCCCCCTGT 62.824 60.000 0.00 0.00 0.00 4.00
3334 4123 1.593166 AATCCACCCCAATCCCCCTG 61.593 60.000 0.00 0.00 0.00 4.45
3335 4124 1.230956 AATCCACCCCAATCCCCCT 60.231 57.895 0.00 0.00 0.00 4.79
3336 4125 1.075301 CAATCCACCCCAATCCCCC 60.075 63.158 0.00 0.00 0.00 5.40
3337 4126 1.075301 CCAATCCACCCCAATCCCC 60.075 63.158 0.00 0.00 0.00 4.81
3338 4127 0.106015 CTCCAATCCACCCCAATCCC 60.106 60.000 0.00 0.00 0.00 3.85
3339 4128 0.106015 CCTCCAATCCACCCCAATCC 60.106 60.000 0.00 0.00 0.00 3.01
3340 4129 0.926293 TCCTCCAATCCACCCCAATC 59.074 55.000 0.00 0.00 0.00 2.67
3341 4130 0.929244 CTCCTCCAATCCACCCCAAT 59.071 55.000 0.00 0.00 0.00 3.16
3342 4131 1.214305 CCTCCTCCAATCCACCCCAA 61.214 60.000 0.00 0.00 0.00 4.12
3343 4132 1.619363 CCTCCTCCAATCCACCCCA 60.619 63.158 0.00 0.00 0.00 4.96
3344 4133 1.214992 AACCTCCTCCAATCCACCCC 61.215 60.000 0.00 0.00 0.00 4.95
3345 4134 0.704664 AAACCTCCTCCAATCCACCC 59.295 55.000 0.00 0.00 0.00 4.61
3346 4135 2.171003 CAAAACCTCCTCCAATCCACC 58.829 52.381 0.00 0.00 0.00 4.61
3347 4136 2.820197 GTCAAAACCTCCTCCAATCCAC 59.180 50.000 0.00 0.00 0.00 4.02
3348 4137 2.716424 AGTCAAAACCTCCTCCAATCCA 59.284 45.455 0.00 0.00 0.00 3.41
3349 4138 3.441500 AGTCAAAACCTCCTCCAATCC 57.558 47.619 0.00 0.00 0.00 3.01
3350 4139 4.145052 ACAAGTCAAAACCTCCTCCAATC 58.855 43.478 0.00 0.00 0.00 2.67
3351 4140 4.184649 ACAAGTCAAAACCTCCTCCAAT 57.815 40.909 0.00 0.00 0.00 3.16
3352 4141 3.662759 ACAAGTCAAAACCTCCTCCAA 57.337 42.857 0.00 0.00 0.00 3.53
3353 4142 3.971305 TCTACAAGTCAAAACCTCCTCCA 59.029 43.478 0.00 0.00 0.00 3.86
3354 4143 4.563786 CCTCTACAAGTCAAAACCTCCTCC 60.564 50.000 0.00 0.00 0.00 4.30
3355 4144 4.563786 CCCTCTACAAGTCAAAACCTCCTC 60.564 50.000 0.00 0.00 0.00 3.71
3356 4145 3.328050 CCCTCTACAAGTCAAAACCTCCT 59.672 47.826 0.00 0.00 0.00 3.69
3357 4146 3.072622 ACCCTCTACAAGTCAAAACCTCC 59.927 47.826 0.00 0.00 0.00 4.30
3358 4147 4.065789 CACCCTCTACAAGTCAAAACCTC 58.934 47.826 0.00 0.00 0.00 3.85
3359 4148 3.458487 ACACCCTCTACAAGTCAAAACCT 59.542 43.478 0.00 0.00 0.00 3.50
3360 4149 3.816994 ACACCCTCTACAAGTCAAAACC 58.183 45.455 0.00 0.00 0.00 3.27
3361 4150 6.148976 GGATTACACCCTCTACAAGTCAAAAC 59.851 42.308 0.00 0.00 0.00 2.43
3362 4151 6.235664 GGATTACACCCTCTACAAGTCAAAA 58.764 40.000 0.00 0.00 0.00 2.44
3363 4152 5.280317 GGGATTACACCCTCTACAAGTCAAA 60.280 44.000 0.00 0.00 45.90 2.69
3364 4153 4.224370 GGGATTACACCCTCTACAAGTCAA 59.776 45.833 0.00 0.00 45.90 3.18
3365 4154 3.773119 GGGATTACACCCTCTACAAGTCA 59.227 47.826 0.00 0.00 45.90 3.41
3366 4155 4.403585 GGGATTACACCCTCTACAAGTC 57.596 50.000 0.00 0.00 45.90 3.01
3377 4166 1.692411 GGATTGGCAGGGATTACACC 58.308 55.000 0.00 0.00 0.00 4.16
3378 4167 1.215423 AGGGATTGGCAGGGATTACAC 59.785 52.381 0.00 0.00 0.00 2.90
3379 4168 1.215173 CAGGGATTGGCAGGGATTACA 59.785 52.381 0.00 0.00 0.00 2.41
3380 4169 1.986882 CAGGGATTGGCAGGGATTAC 58.013 55.000 0.00 0.00 0.00 1.89
3381 4170 0.185901 GCAGGGATTGGCAGGGATTA 59.814 55.000 0.00 0.00 0.00 1.75
3382 4171 1.075748 GCAGGGATTGGCAGGGATT 60.076 57.895 0.00 0.00 0.00 3.01
3383 4172 2.605299 GCAGGGATTGGCAGGGAT 59.395 61.111 0.00 0.00 0.00 3.85
3390 4179 1.989508 GGGGTTTGGCAGGGATTGG 60.990 63.158 0.00 0.00 0.00 3.16
3391 4180 0.972471 GAGGGGTTTGGCAGGGATTG 60.972 60.000 0.00 0.00 0.00 2.67
3392 4181 1.388133 GAGGGGTTTGGCAGGGATT 59.612 57.895 0.00 0.00 0.00 3.01
3393 4182 2.626467 GGAGGGGTTTGGCAGGGAT 61.626 63.158 0.00 0.00 0.00 3.85
3394 4183 3.264845 GGAGGGGTTTGGCAGGGA 61.265 66.667 0.00 0.00 0.00 4.20
3395 4184 2.460476 AATGGAGGGGTTTGGCAGGG 62.460 60.000 0.00 0.00 0.00 4.45
3396 4185 0.545071 AAATGGAGGGGTTTGGCAGG 60.545 55.000 0.00 0.00 0.00 4.85
3397 4186 1.276138 GAAAATGGAGGGGTTTGGCAG 59.724 52.381 0.00 0.00 0.00 4.85
3398 4187 1.347062 GAAAATGGAGGGGTTTGGCA 58.653 50.000 0.00 0.00 0.00 4.92
3399 4188 0.613260 GGAAAATGGAGGGGTTTGGC 59.387 55.000 0.00 0.00 0.00 4.52
3400 4189 1.203300 AGGGAAAATGGAGGGGTTTGG 60.203 52.381 0.00 0.00 0.00 3.28
3401 4190 1.901833 CAGGGAAAATGGAGGGGTTTG 59.098 52.381 0.00 0.00 0.00 2.93
3402 4191 1.507742 ACAGGGAAAATGGAGGGGTTT 59.492 47.619 0.00 0.00 0.00 3.27
3403 4192 1.077169 GACAGGGAAAATGGAGGGGTT 59.923 52.381 0.00 0.00 0.00 4.11
3404 4193 0.704664 GACAGGGAAAATGGAGGGGT 59.295 55.000 0.00 0.00 0.00 4.95
3405 4194 0.704076 TGACAGGGAAAATGGAGGGG 59.296 55.000 0.00 0.00 0.00 4.79
3406 4195 2.171003 GTTGACAGGGAAAATGGAGGG 58.829 52.381 0.00 0.00 0.00 4.30
3407 4196 2.171003 GGTTGACAGGGAAAATGGAGG 58.829 52.381 0.00 0.00 0.00 4.30
3408 4197 1.812571 CGGTTGACAGGGAAAATGGAG 59.187 52.381 0.00 0.00 0.00 3.86
3409 4198 1.422024 TCGGTTGACAGGGAAAATGGA 59.578 47.619 0.00 0.00 0.00 3.41
3410 4199 1.904287 TCGGTTGACAGGGAAAATGG 58.096 50.000 0.00 0.00 0.00 3.16
3411 4200 2.621055 TGTTCGGTTGACAGGGAAAATG 59.379 45.455 0.00 0.00 0.00 2.32
3412 4201 2.884639 CTGTTCGGTTGACAGGGAAAAT 59.115 45.455 0.00 0.00 40.58 1.82
3413 4202 2.294074 CTGTTCGGTTGACAGGGAAAA 58.706 47.619 0.00 0.00 40.58 2.29
3414 4203 1.961793 CTGTTCGGTTGACAGGGAAA 58.038 50.000 0.00 0.00 40.58 3.13
3415 4204 3.698250 CTGTTCGGTTGACAGGGAA 57.302 52.632 0.00 0.00 40.58 3.97
3419 4208 1.966451 GGGCCTGTTCGGTTGACAG 60.966 63.158 0.84 0.00 43.19 3.51
3420 4209 1.990160 AAGGGCCTGTTCGGTTGACA 61.990 55.000 6.92 0.00 34.25 3.58
3421 4210 1.228154 AAGGGCCTGTTCGGTTGAC 60.228 57.895 6.92 0.00 34.25 3.18
3422 4211 1.072505 GAAGGGCCTGTTCGGTTGA 59.927 57.895 6.92 0.00 34.25 3.18
3423 4212 2.325082 CGAAGGGCCTGTTCGGTTG 61.325 63.158 24.69 0.00 42.47 3.77
3424 4213 2.032071 CGAAGGGCCTGTTCGGTT 59.968 61.111 24.69 0.00 42.47 4.44
3428 4217 0.951040 CTGACACGAAGGGCCTGTTC 60.951 60.000 6.92 0.00 0.00 3.18
3429 4218 1.071471 CTGACACGAAGGGCCTGTT 59.929 57.895 6.92 0.00 0.00 3.16
3430 4219 2.743718 CTGACACGAAGGGCCTGT 59.256 61.111 6.92 0.00 0.00 4.00
3431 4220 2.743928 GCTGACACGAAGGGCCTG 60.744 66.667 6.92 0.00 0.00 4.85
3432 4221 2.129555 AATGCTGACACGAAGGGCCT 62.130 55.000 0.00 0.00 0.00 5.19
3433 4222 1.675641 AATGCTGACACGAAGGGCC 60.676 57.895 0.00 0.00 0.00 5.80
3434 4223 0.955428 TCAATGCTGACACGAAGGGC 60.955 55.000 0.00 0.00 0.00 5.19
3435 4224 1.522668 TTCAATGCTGACACGAAGGG 58.477 50.000 0.00 0.00 0.00 3.95
3436 4225 4.024556 GGATATTCAATGCTGACACGAAGG 60.025 45.833 0.00 0.00 0.00 3.46
3437 4226 4.571984 TGGATATTCAATGCTGACACGAAG 59.428 41.667 0.00 0.00 0.00 3.79
3438 4227 4.512484 TGGATATTCAATGCTGACACGAA 58.488 39.130 0.00 0.00 0.00 3.85
3439 4228 4.135747 TGGATATTCAATGCTGACACGA 57.864 40.909 0.00 0.00 0.00 4.35
3440 4229 4.571984 TCTTGGATATTCAATGCTGACACG 59.428 41.667 0.00 0.00 0.00 4.49
3685 4649 5.238214 GCAGATAGTAAGAATGCTTCCTTGG 59.762 44.000 0.00 0.00 35.56 3.61
3696 4660 7.119262 GTGGCTAAACAAAGCAGATAGTAAGAA 59.881 37.037 0.00 0.00 44.64 2.52
3935 5024 9.346005 TCACTATAGAAACCAGTGATACGAATA 57.654 33.333 6.78 0.00 42.75 1.75
4029 5118 8.502105 ACGGTCTTATATTTCTTTACAAAGGG 57.498 34.615 2.04 0.00 36.67 3.95
4051 5140 8.286800 TGAAACACAAAGTAATGATCTAAACGG 58.713 33.333 0.00 0.00 0.00 4.44
4063 5152 8.185505 AGAGCGTTTAAATGAAACACAAAGTAA 58.814 29.630 11.68 0.00 46.72 2.24
4066 5155 7.449934 AAGAGCGTTTAAATGAAACACAAAG 57.550 32.000 11.68 0.00 46.72 2.77
4084 5173 7.434492 TCCCTCTGTAAAGAAATATAAGAGCG 58.566 38.462 0.00 0.00 0.00 5.03
4191 5297 9.305925 GAGAAGCAAAAATTACCAGATTAATGG 57.694 33.333 0.00 0.00 46.47 3.16
4272 5378 6.040842 GGTTTAACTCACATTATCATGCCCAT 59.959 38.462 0.00 0.00 33.05 4.00
4460 5575 2.699073 CCACTTGAGGATGGCATCG 58.301 57.895 20.50 9.33 0.00 3.84
4626 5824 3.270877 CCTCTGTAGAATTTGTTCCGGG 58.729 50.000 0.00 0.00 0.00 5.73
4815 6013 9.944376 ATGTCTAAGCTTCTACATTTAAACTGA 57.056 29.630 16.83 0.00 0.00 3.41
4864 6062 8.034313 ACAGATGGAGTAAAATATAGCTTCCA 57.966 34.615 0.00 0.00 0.00 3.53
4922 6120 4.321675 CCCTCGGACCCTTTTTAAACATTG 60.322 45.833 0.00 0.00 0.00 2.82
4925 6123 2.442502 TCCCTCGGACCCTTTTTAAACA 59.557 45.455 0.00 0.00 0.00 2.83
4926 6124 3.079578 CTCCCTCGGACCCTTTTTAAAC 58.920 50.000 0.00 0.00 0.00 2.01
4927 6125 2.712627 ACTCCCTCGGACCCTTTTTAAA 59.287 45.455 0.00 0.00 0.00 1.52
4934 6132 1.007963 TGAATTACTCCCTCGGACCCT 59.992 52.381 0.00 0.00 0.00 4.34
4940 6138 8.904099 AATTTAGGTAATGAATTACTCCCTCG 57.096 34.615 11.84 0.00 41.71 4.63
5055 6267 2.472695 TCGGAACAATTAGCAGTGCT 57.527 45.000 23.44 23.44 43.41 4.40
5067 6279 2.637872 AGGTGAGGATTTCTTCGGAACA 59.362 45.455 0.00 0.00 33.18 3.18
5130 6348 8.839310 AGGAGAGAATGGATTTGTAAATATCG 57.161 34.615 0.00 0.00 0.00 2.92
5133 6351 7.350921 AGGGAGGAGAGAATGGATTTGTAAATA 59.649 37.037 0.00 0.00 0.00 1.40
5155 6375 3.562108 ACTGTAGGAGAAAGGAAGGGA 57.438 47.619 0.00 0.00 0.00 4.20
5157 6377 4.202472 ACCAAACTGTAGGAGAAAGGAAGG 60.202 45.833 6.25 0.00 0.00 3.46
5159 6379 4.410883 TCACCAAACTGTAGGAGAAAGGAA 59.589 41.667 6.25 0.00 0.00 3.36
5169 6389 2.632996 TCCTCACCTCACCAAACTGTAG 59.367 50.000 0.00 0.00 0.00 2.74
5172 6392 2.498167 CTTCCTCACCTCACCAAACTG 58.502 52.381 0.00 0.00 0.00 3.16
5174 6394 1.545651 CCCTTCCTCACCTCACCAAAC 60.546 57.143 0.00 0.00 0.00 2.93
5176 6396 1.133809 CCCCTTCCTCACCTCACCAA 61.134 60.000 0.00 0.00 0.00 3.67
5177 6397 1.538876 CCCCTTCCTCACCTCACCA 60.539 63.158 0.00 0.00 0.00 4.17
5190 6418 1.203149 ACAGGAGAACGAGTACCCCTT 60.203 52.381 0.00 0.00 0.00 3.95
5196 6424 8.798859 AGTAGTAATAAACAGGAGAACGAGTA 57.201 34.615 0.00 0.00 0.00 2.59
5197 6425 7.148103 GGAGTAGTAATAAACAGGAGAACGAGT 60.148 40.741 0.00 0.00 0.00 4.18
5199 6427 6.096001 GGGAGTAGTAATAAACAGGAGAACGA 59.904 42.308 0.00 0.00 0.00 3.85
5200 6428 6.096564 AGGGAGTAGTAATAAACAGGAGAACG 59.903 42.308 0.00 0.00 0.00 3.95
5202 6430 7.342284 CAGAGGGAGTAGTAATAAACAGGAGAA 59.658 40.741 0.00 0.00 0.00 2.87
5222 6452 3.933332 GACAAGTAATTCCGAACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
5223 6453 4.822026 AGACAAGTAATTCCGAACAGAGG 58.178 43.478 0.00 0.00 0.00 3.69
5224 6454 4.559251 CGAGACAAGTAATTCCGAACAGAG 59.441 45.833 0.00 0.00 0.00 3.35
5225 6455 4.482386 CGAGACAAGTAATTCCGAACAGA 58.518 43.478 0.00 0.00 0.00 3.41
5226 6456 3.612860 CCGAGACAAGTAATTCCGAACAG 59.387 47.826 0.00 0.00 0.00 3.16
5227 6457 3.256383 TCCGAGACAAGTAATTCCGAACA 59.744 43.478 0.00 0.00 0.00 3.18
5228 6458 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
5229 6459 4.730949 ATCCGAGACAAGTAATTCCGAA 57.269 40.909 0.00 0.00 0.00 4.30
5230 6460 5.278808 CCATATCCGAGACAAGTAATTCCGA 60.279 44.000 0.00 0.00 0.00 4.55
5231 6461 4.923871 CCATATCCGAGACAAGTAATTCCG 59.076 45.833 0.00 0.00 0.00 4.30
5232 6462 6.097915 TCCATATCCGAGACAAGTAATTCC 57.902 41.667 0.00 0.00 0.00 3.01
5233 6463 7.155328 ACATCCATATCCGAGACAAGTAATTC 58.845 38.462 0.00 0.00 0.00 2.17
5234 6464 7.067496 ACATCCATATCCGAGACAAGTAATT 57.933 36.000 0.00 0.00 0.00 1.40
5235 6465 6.672266 ACATCCATATCCGAGACAAGTAAT 57.328 37.500 0.00 0.00 0.00 1.89
5236 6466 7.670140 AGATACATCCATATCCGAGACAAGTAA 59.330 37.037 0.00 0.00 32.76 2.24
5237 6467 7.175797 AGATACATCCATATCCGAGACAAGTA 58.824 38.462 0.00 0.00 32.76 2.24
5238 6468 6.013379 AGATACATCCATATCCGAGACAAGT 58.987 40.000 0.00 0.00 32.76 3.16
5239 6469 6.522625 AGATACATCCATATCCGAGACAAG 57.477 41.667 0.00 0.00 32.76 3.16
5240 6470 7.402862 TCTAGATACATCCATATCCGAGACAA 58.597 38.462 0.00 0.00 32.76 3.18
5241 6471 6.958767 TCTAGATACATCCATATCCGAGACA 58.041 40.000 0.00 0.00 32.76 3.41
5242 6472 7.554835 AGTTCTAGATACATCCATATCCGAGAC 59.445 40.741 0.00 0.00 32.76 3.36
5243 6473 7.634718 AGTTCTAGATACATCCATATCCGAGA 58.365 38.462 0.00 0.00 32.76 4.04
5244 6474 7.873719 AGTTCTAGATACATCCATATCCGAG 57.126 40.000 0.00 0.00 32.76 4.63
5245 6475 9.749340 TTTAGTTCTAGATACATCCATATCCGA 57.251 33.333 0.00 0.00 32.76 4.55
5272 6502 8.939929 CGCAAAAATGGATGTATCTAGATGTAT 58.060 33.333 15.79 9.11 0.00 2.29
5273 6503 8.147704 TCGCAAAAATGGATGTATCTAGATGTA 58.852 33.333 15.79 4.44 0.00 2.29
5274 6504 6.992123 TCGCAAAAATGGATGTATCTAGATGT 59.008 34.615 15.79 1.25 0.00 3.06
5275 6505 7.041848 TGTCGCAAAAATGGATGTATCTAGATG 60.042 37.037 15.79 0.00 0.00 2.90
5276 6506 6.992123 TGTCGCAAAAATGGATGTATCTAGAT 59.008 34.615 10.73 10.73 0.00 1.98
5277 6507 6.345298 TGTCGCAAAAATGGATGTATCTAGA 58.655 36.000 0.00 0.00 0.00 2.43
5278 6508 6.603237 TGTCGCAAAAATGGATGTATCTAG 57.397 37.500 0.00 0.00 0.00 2.43
5279 6509 6.597672 ACTTGTCGCAAAAATGGATGTATCTA 59.402 34.615 0.00 0.00 0.00 1.98
5280 6510 5.415701 ACTTGTCGCAAAAATGGATGTATCT 59.584 36.000 0.00 0.00 0.00 1.98
5281 6511 5.640732 ACTTGTCGCAAAAATGGATGTATC 58.359 37.500 0.00 0.00 0.00 2.24
5282 6512 5.643379 ACTTGTCGCAAAAATGGATGTAT 57.357 34.783 0.00 0.00 0.00 2.29
5283 6513 6.561737 TTACTTGTCGCAAAAATGGATGTA 57.438 33.333 0.00 0.00 0.00 2.29
5284 6514 5.446143 TTACTTGTCGCAAAAATGGATGT 57.554 34.783 0.00 0.00 0.00 3.06
5285 6515 6.034898 GGAATTACTTGTCGCAAAAATGGATG 59.965 38.462 0.00 0.00 0.00 3.51
5286 6516 6.099341 GGAATTACTTGTCGCAAAAATGGAT 58.901 36.000 0.00 0.00 0.00 3.41
5287 6517 5.465935 GGAATTACTTGTCGCAAAAATGGA 58.534 37.500 0.00 0.00 0.00 3.41
5288 6518 4.323336 CGGAATTACTTGTCGCAAAAATGG 59.677 41.667 0.00 0.00 0.00 3.16
5289 6519 5.150683 TCGGAATTACTTGTCGCAAAAATG 58.849 37.500 0.00 0.00 0.00 2.32
5290 6520 5.365403 TCGGAATTACTTGTCGCAAAAAT 57.635 34.783 0.00 0.00 0.00 1.82
5291 6521 4.815040 TCGGAATTACTTGTCGCAAAAA 57.185 36.364 0.00 0.00 0.00 1.94
5292 6522 4.529446 GTTCGGAATTACTTGTCGCAAAA 58.471 39.130 0.00 0.00 0.00 2.44
5293 6523 3.363182 CGTTCGGAATTACTTGTCGCAAA 60.363 43.478 0.00 0.00 0.00 3.68
5294 6524 2.156117 CGTTCGGAATTACTTGTCGCAA 59.844 45.455 0.00 0.00 0.00 4.85
5295 6525 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
5296 6526 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
5297 6527 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
5298 6528 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5299 6529 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5300 6530 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5301 6531 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5302 6532 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5303 6533 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5304 6534 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5305 6535 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
5306 6536 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
5307 6537 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
5308 6538 0.038744 AAGTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
5309 6539 0.455005 GAAGTACTCCCTCCGTTCGG 59.545 60.000 4.74 4.74 0.00 4.30
5310 6540 0.098376 CGAAGTACTCCCTCCGTTCG 59.902 60.000 0.00 0.00 0.00 3.95
5311 6541 1.172175 ACGAAGTACTCCCTCCGTTC 58.828 55.000 0.00 0.00 41.94 3.95
5312 6542 1.271656 CAACGAAGTACTCCCTCCGTT 59.728 52.381 0.00 5.14 45.00 4.44
5313 6543 0.886563 CAACGAAGTACTCCCTCCGT 59.113 55.000 0.00 0.00 45.00 4.69
5314 6544 0.458025 GCAACGAAGTACTCCCTCCG 60.458 60.000 0.00 0.00 45.00 4.63
5315 6545 0.606604 TGCAACGAAGTACTCCCTCC 59.393 55.000 0.00 0.00 45.00 4.30
5316 6546 1.000506 TGTGCAACGAAGTACTCCCTC 59.999 52.381 0.00 0.00 45.00 4.30
5317 6547 1.045407 TGTGCAACGAAGTACTCCCT 58.955 50.000 0.00 0.00 45.00 4.20
5318 6548 1.873698 TTGTGCAACGAAGTACTCCC 58.126 50.000 0.00 0.00 45.00 4.30
5319 6549 2.806244 ACATTGTGCAACGAAGTACTCC 59.194 45.455 0.00 0.00 45.00 3.85
5320 6550 4.468095 AACATTGTGCAACGAAGTACTC 57.532 40.909 0.00 0.00 45.00 2.59
5321 6551 5.176958 GTCTAACATTGTGCAACGAAGTACT 59.823 40.000 0.00 0.00 45.00 2.73
5322 6552 5.050634 TGTCTAACATTGTGCAACGAAGTAC 60.051 40.000 0.00 0.00 45.00 2.73
5323 6553 5.051153 TGTCTAACATTGTGCAACGAAGTA 58.949 37.500 0.00 0.00 45.00 2.24
5324 6554 4.515191 ATGTCTAACATTGTGCAACGAAGT 59.485 37.500 0.00 0.00 37.93 3.01
5325 6555 4.466567 TGTCTAACATTGTGCAACGAAG 57.533 40.909 0.00 0.00 42.39 3.79
5326 6556 5.431420 AATGTCTAACATTGTGCAACGAA 57.569 34.783 4.59 0.00 46.18 3.85
5337 6567 5.119931 TCGCTTGCAAAAATGTCTAACAT 57.880 34.783 0.00 0.00 41.31 2.71
5338 6568 4.560136 TCGCTTGCAAAAATGTCTAACA 57.440 36.364 0.00 0.00 0.00 2.41
5339 6569 4.917415 ACATCGCTTGCAAAAATGTCTAAC 59.083 37.500 12.71 0.00 0.00 2.34
5340 6570 5.119931 ACATCGCTTGCAAAAATGTCTAA 57.880 34.783 12.71 0.00 0.00 2.10
5341 6571 4.764679 ACATCGCTTGCAAAAATGTCTA 57.235 36.364 12.71 0.00 0.00 2.59
5342 6572 3.648339 ACATCGCTTGCAAAAATGTCT 57.352 38.095 12.71 0.00 0.00 3.41
5343 6573 4.201523 GCTAACATCGCTTGCAAAAATGTC 60.202 41.667 16.76 5.99 30.56 3.06
5344 6574 3.674753 GCTAACATCGCTTGCAAAAATGT 59.325 39.130 12.71 12.71 32.15 2.71
5345 6575 3.922240 AGCTAACATCGCTTGCAAAAATG 59.078 39.130 0.00 7.16 32.98 2.32
5346 6576 4.178545 AGCTAACATCGCTTGCAAAAAT 57.821 36.364 0.00 0.00 32.98 1.82
5347 6577 3.641437 AGCTAACATCGCTTGCAAAAA 57.359 38.095 0.00 0.00 32.98 1.94
5348 6578 3.641437 AAGCTAACATCGCTTGCAAAA 57.359 38.095 0.00 0.00 45.30 2.44
5355 6585 5.682943 TGTTTTTACAAGCTAACATCGCT 57.317 34.783 0.00 0.00 39.94 4.93
5356 6586 6.927933 AATGTTTTTACAAGCTAACATCGC 57.072 33.333 10.00 0.00 39.55 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.