Multiple sequence alignment - TraesCS2A01G361500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G361500 chr2A 100.000 3122 0 0 1 3122 605338360 605335239 0.000000e+00 5766.0
1 TraesCS2A01G361500 chr2A 96.024 327 13 0 298 624 527634824 527634498 1.650000e-147 532.0
2 TraesCS2A01G361500 chr2A 87.364 459 52 3 1193 1650 605316172 605315719 3.570000e-144 521.0
3 TraesCS2A01G361500 chr2A 89.375 320 21 10 885 1198 605316514 605316202 1.050000e-104 390.0
4 TraesCS2A01G361500 chr2A 87.879 330 34 4 2220 2543 528209675 528210004 1.760000e-102 383.0
5 TraesCS2A01G361500 chr2A 100.000 50 0 0 250 299 130725948 130725899 3.320000e-15 93.5
6 TraesCS2A01G361500 chr3A 93.910 2545 95 26 627 3122 727352126 727354659 0.000000e+00 3786.0
7 TraesCS2A01G361500 chr3A 87.500 832 92 6 1193 2023 727374258 727373438 0.000000e+00 950.0
8 TraesCS2A01G361500 chr3A 88.533 593 29 21 627 1198 727374855 727374281 0.000000e+00 682.0
9 TraesCS2A01G361500 chr3A 96.330 327 12 0 298 624 145252793 145252467 3.540000e-149 538.0
10 TraesCS2A01G361500 chr3A 96.024 327 13 0 298 624 151184679 151185005 1.650000e-147 532.0
11 TraesCS2A01G361500 chr3B 95.223 1842 78 7 1291 3122 804009088 804010929 0.000000e+00 2905.0
12 TraesCS2A01G361500 chr3B 86.111 828 101 5 1193 2014 804108567 804109386 0.000000e+00 880.0
13 TraesCS2A01G361500 chr3B 89.833 600 24 11 627 1203 804008422 804009007 0.000000e+00 736.0
14 TraesCS2A01G361500 chr3B 88.485 330 24 8 883 1198 804108208 804108537 1.360000e-103 387.0
15 TraesCS2A01G361500 chr3B 93.878 49 3 0 251 299 16324290 16324338 1.200000e-09 75.0
16 TraesCS2A01G361500 chr3D 87.416 596 29 17 648 1198 597246014 597246608 0.000000e+00 643.0
17 TraesCS2A01G361500 chr3D 95.238 336 15 1 291 625 7428771 7429106 5.930000e-147 531.0
18 TraesCS2A01G361500 chr3D 94.659 337 17 1 294 629 507868335 507868671 3.570000e-144 521.0
19 TraesCS2A01G361500 chr3D 87.025 316 39 2 2220 2534 590219346 590219660 3.830000e-94 355.0
20 TraesCS2A01G361500 chr3D 85.357 280 39 2 2833 3111 381881674 381881396 3.940000e-74 289.0
21 TraesCS2A01G361500 chr3D 85.926 135 19 0 2834 2968 56412115 56411981 9.020000e-31 145.0
22 TraesCS2A01G361500 chr7A 95.770 331 13 1 298 627 651309915 651309585 1.650000e-147 532.0
23 TraesCS2A01G361500 chr7A 96.000 50 2 0 250 299 621043888 621043937 7.180000e-12 82.4
24 TraesCS2A01G361500 chr6B 96.024 327 13 0 298 624 544762589 544762263 1.650000e-147 532.0
25 TraesCS2A01G361500 chr6A 95.719 327 14 0 298 624 42750249 42750575 7.670000e-146 527.0
26 TraesCS2A01G361500 chr1A 95.719 327 14 0 298 624 430723441 430723115 7.670000e-146 527.0
27 TraesCS2A01G361500 chr7D 87.462 327 41 0 2214 2540 477837315 477836989 8.170000e-101 377.0
28 TraesCS2A01G361500 chr7D 100.000 28 0 0 627 654 441986871 441986898 6.000000e-03 52.8
29 TraesCS2A01G361500 chr4A 87.087 333 38 4 2211 2540 89954242 89954572 3.800000e-99 372.0
30 TraesCS2A01G361500 chr2D 86.478 318 42 1 2224 2540 630766307 630766624 6.410000e-92 348.0
31 TraesCS2A01G361500 chr1D 86.335 322 41 2 2220 2540 474970591 474970272 6.410000e-92 348.0
32 TraesCS2A01G361500 chr1D 85.866 283 38 2 2830 3111 476406593 476406874 1.820000e-77 300.0
33 TraesCS2A01G361500 chr6D 84.661 339 50 2 2203 2540 123967166 123967503 1.390000e-88 337.0
34 TraesCS2A01G361500 chr5A 91.304 69 6 0 231 299 671479096 671479164 9.220000e-16 95.3
35 TraesCS2A01G361500 chr2B 98.000 50 1 0 250 299 70043618 70043667 1.540000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G361500 chr2A 605335239 605338360 3121 True 5766.0 5766 100.0000 1 3122 1 chr2A.!!$R3 3121
1 TraesCS2A01G361500 chr2A 605315719 605316514 795 True 455.5 521 88.3695 885 1650 2 chr2A.!!$R4 765
2 TraesCS2A01G361500 chr3A 727352126 727354659 2533 False 3786.0 3786 93.9100 627 3122 1 chr3A.!!$F2 2495
3 TraesCS2A01G361500 chr3A 727373438 727374855 1417 True 816.0 950 88.0165 627 2023 2 chr3A.!!$R2 1396
4 TraesCS2A01G361500 chr3B 804008422 804010929 2507 False 1820.5 2905 92.5280 627 3122 2 chr3B.!!$F2 2495
5 TraesCS2A01G361500 chr3B 804108208 804109386 1178 False 633.5 880 87.2980 883 2014 2 chr3B.!!$F3 1131
6 TraesCS2A01G361500 chr3D 597246014 597246608 594 False 643.0 643 87.4160 648 1198 1 chr3D.!!$F4 550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
37 38 0.106519 AAGGGGAATTGGCGGATCTG 60.107 55.0 0.00 0.0 0.0 2.90 F
40 41 0.106719 GGGAATTGGCGGATCTGGAA 60.107 55.0 3.14 0.0 0.0 3.53 F
293 294 0.169009 GCCAGCGAGCACTTTTTAGG 59.831 55.0 0.00 0.0 0.0 2.69 F
294 295 1.523758 CCAGCGAGCACTTTTTAGGT 58.476 50.0 0.00 0.0 0.0 3.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1029 1089 0.825840 CCAGATCTCCGTCTCCTCCC 60.826 65.000 0.00 0.0 0.0 4.30 R
1032 1092 1.456705 GGCCAGATCTCCGTCTCCT 60.457 63.158 0.00 0.0 0.0 3.69 R
1234 1342 2.293399 GTCGTTTCCATGGCAAGAAGTT 59.707 45.455 6.96 0.0 0.0 2.66 R
2197 2317 6.353323 CCCCTTAACAAAAACCAAACTCATT 58.647 36.000 0.00 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.649267 AAGGAAGAAGGAGAAGAAAGGG 57.351 45.455 0.00 0.00 0.00 3.95
23 24 2.916269 AGGAAGAAGGAGAAGAAAGGGG 59.084 50.000 0.00 0.00 0.00 4.79
24 25 2.913617 GGAAGAAGGAGAAGAAAGGGGA 59.086 50.000 0.00 0.00 0.00 4.81
25 26 3.330998 GGAAGAAGGAGAAGAAAGGGGAA 59.669 47.826 0.00 0.00 0.00 3.97
26 27 4.017958 GGAAGAAGGAGAAGAAAGGGGAAT 60.018 45.833 0.00 0.00 0.00 3.01
27 28 5.517477 GGAAGAAGGAGAAGAAAGGGGAATT 60.517 44.000 0.00 0.00 0.00 2.17
28 29 4.928263 AGAAGGAGAAGAAAGGGGAATTG 58.072 43.478 0.00 0.00 0.00 2.32
29 30 3.746792 AGGAGAAGAAAGGGGAATTGG 57.253 47.619 0.00 0.00 0.00 3.16
30 31 2.103373 GGAGAAGAAAGGGGAATTGGC 58.897 52.381 0.00 0.00 0.00 4.52
31 32 1.745653 GAGAAGAAAGGGGAATTGGCG 59.254 52.381 0.00 0.00 0.00 5.69
32 33 0.817654 GAAGAAAGGGGAATTGGCGG 59.182 55.000 0.00 0.00 0.00 6.13
33 34 0.407918 AAGAAAGGGGAATTGGCGGA 59.592 50.000 0.00 0.00 0.00 5.54
34 35 0.631212 AGAAAGGGGAATTGGCGGAT 59.369 50.000 0.00 0.00 0.00 4.18
35 36 1.032794 GAAAGGGGAATTGGCGGATC 58.967 55.000 0.00 0.00 0.00 3.36
36 37 0.631212 AAAGGGGAATTGGCGGATCT 59.369 50.000 0.00 0.00 0.00 2.75
37 38 0.106519 AAGGGGAATTGGCGGATCTG 60.107 55.000 0.00 0.00 0.00 2.90
38 39 1.529244 GGGGAATTGGCGGATCTGG 60.529 63.158 3.14 0.00 0.00 3.86
39 40 1.531748 GGGAATTGGCGGATCTGGA 59.468 57.895 3.14 0.00 0.00 3.86
40 41 0.106719 GGGAATTGGCGGATCTGGAA 60.107 55.000 3.14 0.00 0.00 3.53
41 42 1.312815 GGAATTGGCGGATCTGGAAG 58.687 55.000 3.14 0.00 0.00 3.46
51 52 3.072476 TCTGGAAGACTGCCCTGC 58.928 61.111 0.00 0.00 38.67 4.85
52 53 1.537397 TCTGGAAGACTGCCCTGCT 60.537 57.895 0.00 0.00 38.67 4.24
53 54 1.376942 CTGGAAGACTGCCCTGCTG 60.377 63.158 0.00 0.00 34.07 4.41
54 55 2.749441 GGAAGACTGCCCTGCTGC 60.749 66.667 0.00 0.00 0.00 5.25
55 56 3.123620 GAAGACTGCCCTGCTGCG 61.124 66.667 0.00 0.00 0.00 5.18
56 57 4.711949 AAGACTGCCCTGCTGCGG 62.712 66.667 0.26 0.26 43.44 5.69
70 71 4.223800 GCGGTTGCAGATGGATGA 57.776 55.556 0.00 0.00 42.15 2.92
71 72 2.020131 GCGGTTGCAGATGGATGAG 58.980 57.895 0.00 0.00 42.15 2.90
72 73 0.462581 GCGGTTGCAGATGGATGAGA 60.463 55.000 0.00 0.00 42.15 3.27
73 74 1.579698 CGGTTGCAGATGGATGAGAG 58.420 55.000 0.00 0.00 0.00 3.20
74 75 1.134580 CGGTTGCAGATGGATGAGAGT 60.135 52.381 0.00 0.00 0.00 3.24
75 76 2.286872 GGTTGCAGATGGATGAGAGTG 58.713 52.381 0.00 0.00 0.00 3.51
76 77 1.669779 GTTGCAGATGGATGAGAGTGC 59.330 52.381 0.00 0.00 0.00 4.40
77 78 0.179092 TGCAGATGGATGAGAGTGCG 60.179 55.000 0.00 0.00 33.52 5.34
78 79 0.879400 GCAGATGGATGAGAGTGCGG 60.879 60.000 0.00 0.00 0.00 5.69
79 80 0.463204 CAGATGGATGAGAGTGCGGT 59.537 55.000 0.00 0.00 0.00 5.68
80 81 0.463204 AGATGGATGAGAGTGCGGTG 59.537 55.000 0.00 0.00 0.00 4.94
81 82 0.531532 GATGGATGAGAGTGCGGTGG 60.532 60.000 0.00 0.00 0.00 4.61
82 83 1.267574 ATGGATGAGAGTGCGGTGGT 61.268 55.000 0.00 0.00 0.00 4.16
83 84 1.448540 GGATGAGAGTGCGGTGGTG 60.449 63.158 0.00 0.00 0.00 4.17
84 85 1.448540 GATGAGAGTGCGGTGGTGG 60.449 63.158 0.00 0.00 0.00 4.61
85 86 2.859273 GATGAGAGTGCGGTGGTGGG 62.859 65.000 0.00 0.00 0.00 4.61
86 87 4.394712 GAGAGTGCGGTGGTGGGG 62.395 72.222 0.00 0.00 0.00 4.96
93 94 3.717294 CGGTGGTGGGGGAGGAAG 61.717 72.222 0.00 0.00 0.00 3.46
94 95 2.204090 GGTGGTGGGGGAGGAAGA 60.204 66.667 0.00 0.00 0.00 2.87
95 96 1.850755 GGTGGTGGGGGAGGAAGAA 60.851 63.158 0.00 0.00 0.00 2.52
96 97 1.685820 GTGGTGGGGGAGGAAGAAG 59.314 63.158 0.00 0.00 0.00 2.85
97 98 1.134438 GTGGTGGGGGAGGAAGAAGT 61.134 60.000 0.00 0.00 0.00 3.01
98 99 1.133809 TGGTGGGGGAGGAAGAAGTG 61.134 60.000 0.00 0.00 0.00 3.16
99 100 1.685820 GTGGGGGAGGAAGAAGTGG 59.314 63.158 0.00 0.00 0.00 4.00
100 101 1.541368 TGGGGGAGGAAGAAGTGGG 60.541 63.158 0.00 0.00 0.00 4.61
101 102 2.309504 GGGGGAGGAAGAAGTGGGG 61.310 68.421 0.00 0.00 0.00 4.96
102 103 1.541620 GGGGAGGAAGAAGTGGGGT 60.542 63.158 0.00 0.00 0.00 4.95
103 104 1.685820 GGGAGGAAGAAGTGGGGTG 59.314 63.158 0.00 0.00 0.00 4.61
104 105 1.685820 GGAGGAAGAAGTGGGGTGG 59.314 63.158 0.00 0.00 0.00 4.61
105 106 1.685820 GAGGAAGAAGTGGGGTGGG 59.314 63.158 0.00 0.00 0.00 4.61
106 107 1.072930 AGGAAGAAGTGGGGTGGGT 60.073 57.895 0.00 0.00 0.00 4.51
107 108 0.701310 AGGAAGAAGTGGGGTGGGTT 60.701 55.000 0.00 0.00 0.00 4.11
108 109 0.539669 GGAAGAAGTGGGGTGGGTTG 60.540 60.000 0.00 0.00 0.00 3.77
109 110 0.539669 GAAGAAGTGGGGTGGGTTGG 60.540 60.000 0.00 0.00 0.00 3.77
110 111 2.018884 AAGAAGTGGGGTGGGTTGGG 62.019 60.000 0.00 0.00 0.00 4.12
111 112 3.517497 AAGTGGGGTGGGTTGGGG 61.517 66.667 0.00 0.00 0.00 4.96
126 127 2.763902 GGGGGAGAGGTGGTTTGG 59.236 66.667 0.00 0.00 0.00 3.28
127 128 2.160853 GGGGGAGAGGTGGTTTGGT 61.161 63.158 0.00 0.00 0.00 3.67
128 129 1.074951 GGGGAGAGGTGGTTTGGTG 59.925 63.158 0.00 0.00 0.00 4.17
129 130 1.074951 GGGAGAGGTGGTTTGGTGG 59.925 63.158 0.00 0.00 0.00 4.61
130 131 1.074951 GGAGAGGTGGTTTGGTGGG 59.925 63.158 0.00 0.00 0.00 4.61
131 132 1.074951 GAGAGGTGGTTTGGTGGGG 59.925 63.158 0.00 0.00 0.00 4.96
132 133 1.386772 AGAGGTGGTTTGGTGGGGA 60.387 57.895 0.00 0.00 0.00 4.81
133 134 1.228459 GAGGTGGTTTGGTGGGGAC 60.228 63.158 0.00 0.00 0.00 4.46
160 161 3.186047 CCGCTTCGGCCTAACACG 61.186 66.667 0.00 0.63 41.17 4.49
161 162 3.186047 CGCTTCGGCCTAACACGG 61.186 66.667 0.00 0.00 37.76 4.94
162 163 2.263540 GCTTCGGCCTAACACGGA 59.736 61.111 0.00 0.00 34.32 4.69
163 164 1.153429 GCTTCGGCCTAACACGGAT 60.153 57.895 0.00 0.00 34.32 4.18
164 165 1.429148 GCTTCGGCCTAACACGGATG 61.429 60.000 0.00 0.00 34.32 3.51
165 166 0.174845 CTTCGGCCTAACACGGATGA 59.825 55.000 0.00 0.00 0.00 2.92
166 167 0.174845 TTCGGCCTAACACGGATGAG 59.825 55.000 0.00 0.00 0.00 2.90
167 168 1.883084 CGGCCTAACACGGATGAGC 60.883 63.158 0.00 0.00 0.00 4.26
168 169 1.523938 GGCCTAACACGGATGAGCC 60.524 63.158 0.00 0.00 0.00 4.70
177 178 4.131376 GGATGAGCCGACCATGTG 57.869 61.111 0.00 0.00 0.00 3.21
178 179 1.524621 GGATGAGCCGACCATGTGG 60.525 63.158 0.00 0.00 42.17 4.17
184 185 2.747460 CCGACCATGTGGCACCTG 60.747 66.667 16.26 15.57 39.32 4.00
185 186 2.747460 CGACCATGTGGCACCTGG 60.747 66.667 32.19 32.19 39.42 4.45
186 187 2.361610 GACCATGTGGCACCTGGG 60.362 66.667 35.06 25.56 38.08 4.45
187 188 3.944250 GACCATGTGGCACCTGGGG 62.944 68.421 35.06 23.47 38.08 4.96
199 200 3.702048 CTGGGGCGAGGGACGAAA 61.702 66.667 0.00 0.00 45.77 3.46
200 201 3.243053 TGGGGCGAGGGACGAAAA 61.243 61.111 0.00 0.00 45.77 2.29
201 202 2.745100 GGGGCGAGGGACGAAAAC 60.745 66.667 0.00 0.00 45.77 2.43
202 203 3.116531 GGGCGAGGGACGAAAACG 61.117 66.667 0.00 0.00 45.77 3.60
203 204 2.048877 GGCGAGGGACGAAAACGA 60.049 61.111 0.00 0.00 45.77 3.85
204 205 2.378084 GGCGAGGGACGAAAACGAC 61.378 63.158 0.00 0.00 45.77 4.34
205 206 2.378084 GCGAGGGACGAAAACGACC 61.378 63.158 0.00 0.00 45.77 4.79
206 207 2.084681 CGAGGGACGAAAACGACCG 61.085 63.158 0.00 0.00 45.77 4.79
207 208 2.356673 AGGGACGAAAACGACCGC 60.357 61.111 0.00 0.00 0.00 5.68
208 209 3.770424 GGGACGAAAACGACCGCG 61.770 66.667 0.00 0.00 44.79 6.46
209 210 4.419957 GGACGAAAACGACCGCGC 62.420 66.667 0.00 0.00 42.48 6.86
210 211 4.748083 GACGAAAACGACCGCGCG 62.748 66.667 25.67 25.67 42.48 6.86
212 213 4.748083 CGAAAACGACCGCGCGAC 62.748 66.667 34.63 23.00 42.48 5.19
213 214 3.694394 GAAAACGACCGCGCGACA 61.694 61.111 34.63 0.00 42.48 4.35
214 215 3.881974 GAAAACGACCGCGCGACAC 62.882 63.158 34.63 20.01 42.48 3.67
225 226 2.951745 GCGACACCTGAGCGATCG 60.952 66.667 11.69 11.69 35.91 3.69
226 227 2.791927 CGACACCTGAGCGATCGA 59.208 61.111 21.57 0.00 34.77 3.59
227 228 1.356979 CGACACCTGAGCGATCGAT 59.643 57.895 21.57 14.21 34.77 3.59
228 229 0.658829 CGACACCTGAGCGATCGATC 60.659 60.000 25.65 25.65 34.77 3.69
240 241 3.103875 TCGATCGCGATCCAACGA 58.896 55.556 36.16 28.92 42.51 3.85
241 242 1.298116 TCGATCGCGATCCAACGAC 60.298 57.895 36.16 16.19 42.51 4.34
242 243 2.627061 CGATCGCGATCCAACGACG 61.627 63.158 36.16 23.11 41.76 5.12
247 248 3.374330 CGATCCAACGACGCAGAC 58.626 61.111 0.00 0.00 35.09 3.51
248 249 1.443702 CGATCCAACGACGCAGACA 60.444 57.895 0.00 0.00 35.09 3.41
249 250 1.674611 CGATCCAACGACGCAGACAC 61.675 60.000 0.00 0.00 35.09 3.67
250 251 1.674611 GATCCAACGACGCAGACACG 61.675 60.000 0.00 0.00 39.50 4.49
251 252 4.059459 CCAACGACGCAGACACGC 62.059 66.667 0.00 0.00 36.19 5.34
264 265 3.930838 CACGCGTGTGCTCTGTAA 58.069 55.556 30.50 0.00 39.67 2.41
265 266 1.775344 CACGCGTGTGCTCTGTAAG 59.225 57.895 30.50 0.12 39.67 2.34
266 267 0.663269 CACGCGTGTGCTCTGTAAGA 60.663 55.000 30.50 0.00 39.29 2.10
267 268 0.663568 ACGCGTGTGCTCTGTAAGAC 60.664 55.000 12.93 0.00 37.36 3.01
268 269 0.663269 CGCGTGTGCTCTGTAAGACA 60.663 55.000 0.00 0.00 37.36 3.41
269 270 1.497991 GCGTGTGCTCTGTAAGACAA 58.502 50.000 0.00 0.00 38.67 3.18
270 271 1.864711 GCGTGTGCTCTGTAAGACAAA 59.135 47.619 0.00 0.00 38.67 2.83
271 272 2.348591 GCGTGTGCTCTGTAAGACAAAC 60.349 50.000 0.00 0.00 38.67 2.93
272 273 2.097396 CGTGTGCTCTGTAAGACAAACG 60.097 50.000 7.60 7.60 43.60 3.60
273 274 3.120792 GTGTGCTCTGTAAGACAAACGA 58.879 45.455 0.00 0.00 38.67 3.85
274 275 3.182572 GTGTGCTCTGTAAGACAAACGAG 59.817 47.826 0.00 0.00 38.67 4.18
275 276 2.155924 GTGCTCTGTAAGACAAACGAGC 59.844 50.000 10.70 10.70 38.67 5.03
276 277 1.727335 GCTCTGTAAGACAAACGAGCC 59.273 52.381 7.68 0.00 38.67 4.70
277 278 2.866460 GCTCTGTAAGACAAACGAGCCA 60.866 50.000 7.68 0.00 38.67 4.75
278 279 2.989840 CTCTGTAAGACAAACGAGCCAG 59.010 50.000 0.00 0.00 38.67 4.85
279 280 1.461127 CTGTAAGACAAACGAGCCAGC 59.539 52.381 0.00 0.00 34.07 4.85
280 281 0.438830 GTAAGACAAACGAGCCAGCG 59.561 55.000 0.00 0.00 37.29 5.18
281 282 0.315886 TAAGACAAACGAGCCAGCGA 59.684 50.000 0.00 0.00 34.83 4.93
282 283 0.946221 AAGACAAACGAGCCAGCGAG 60.946 55.000 0.00 0.00 34.83 5.03
283 284 3.016474 GACAAACGAGCCAGCGAGC 62.016 63.158 0.00 0.00 34.83 5.03
284 285 3.043713 CAAACGAGCCAGCGAGCA 61.044 61.111 3.80 0.00 34.23 4.26
285 286 3.044305 AAACGAGCCAGCGAGCAC 61.044 61.111 3.80 0.00 34.23 4.40
286 287 3.521529 AAACGAGCCAGCGAGCACT 62.522 57.895 3.80 0.00 34.23 4.40
287 288 2.996168 AAACGAGCCAGCGAGCACTT 62.996 55.000 3.80 0.00 34.23 3.16
288 289 2.740055 CGAGCCAGCGAGCACTTT 60.740 61.111 3.80 0.00 34.23 2.66
289 290 2.320587 CGAGCCAGCGAGCACTTTT 61.321 57.895 3.80 0.00 34.23 2.27
290 291 1.845809 CGAGCCAGCGAGCACTTTTT 61.846 55.000 3.80 0.00 34.23 1.94
291 292 1.156736 GAGCCAGCGAGCACTTTTTA 58.843 50.000 3.80 0.00 34.23 1.52
292 293 1.129437 GAGCCAGCGAGCACTTTTTAG 59.871 52.381 3.80 0.00 34.23 1.85
293 294 0.169009 GCCAGCGAGCACTTTTTAGG 59.831 55.000 0.00 0.00 0.00 2.69
294 295 1.523758 CCAGCGAGCACTTTTTAGGT 58.476 50.000 0.00 0.00 0.00 3.08
295 296 1.880027 CCAGCGAGCACTTTTTAGGTT 59.120 47.619 0.00 0.00 0.00 3.50
296 297 2.293399 CCAGCGAGCACTTTTTAGGTTT 59.707 45.455 0.00 0.00 0.00 3.27
297 298 3.243401 CCAGCGAGCACTTTTTAGGTTTT 60.243 43.478 0.00 0.00 0.00 2.43
298 299 4.023536 CCAGCGAGCACTTTTTAGGTTTTA 60.024 41.667 0.00 0.00 0.00 1.52
299 300 4.909880 CAGCGAGCACTTTTTAGGTTTTAC 59.090 41.667 0.00 0.00 0.00 2.01
300 301 4.820173 AGCGAGCACTTTTTAGGTTTTACT 59.180 37.500 0.00 0.00 0.00 2.24
301 302 5.049612 AGCGAGCACTTTTTAGGTTTTACTC 60.050 40.000 0.00 0.00 0.00 2.59
302 303 5.686834 CGAGCACTTTTTAGGTTTTACTCC 58.313 41.667 0.00 0.00 0.00 3.85
303 304 5.334646 CGAGCACTTTTTAGGTTTTACTCCC 60.335 44.000 0.00 0.00 0.00 4.30
304 305 5.702266 AGCACTTTTTAGGTTTTACTCCCT 58.298 37.500 0.00 0.00 34.74 4.20
305 306 5.768662 AGCACTTTTTAGGTTTTACTCCCTC 59.231 40.000 0.00 0.00 32.08 4.30
306 307 5.048224 GCACTTTTTAGGTTTTACTCCCTCC 60.048 44.000 0.00 0.00 32.08 4.30
307 308 6.304624 CACTTTTTAGGTTTTACTCCCTCCT 58.695 40.000 0.00 0.00 32.08 3.69
308 309 6.776116 CACTTTTTAGGTTTTACTCCCTCCTT 59.224 38.462 0.00 0.00 32.08 3.36
309 310 7.287005 CACTTTTTAGGTTTTACTCCCTCCTTT 59.713 37.037 0.00 0.00 32.08 3.11
310 311 7.504911 ACTTTTTAGGTTTTACTCCCTCCTTTC 59.495 37.037 0.00 0.00 32.08 2.62
311 312 5.509832 TTAGGTTTTACTCCCTCCTTTCC 57.490 43.478 0.00 0.00 32.08 3.13
312 313 2.305052 AGGTTTTACTCCCTCCTTTCCG 59.695 50.000 0.00 0.00 0.00 4.30
313 314 2.617276 GGTTTTACTCCCTCCTTTCCGG 60.617 54.545 0.00 0.00 0.00 5.14
314 315 2.034436 TTTACTCCCTCCTTTCCGGT 57.966 50.000 0.00 0.00 0.00 5.28
315 316 2.034436 TTACTCCCTCCTTTCCGGTT 57.966 50.000 0.00 0.00 0.00 4.44
316 317 2.034436 TACTCCCTCCTTTCCGGTTT 57.966 50.000 0.00 0.00 0.00 3.27
317 318 2.034436 ACTCCCTCCTTTCCGGTTTA 57.966 50.000 0.00 0.00 0.00 2.01
318 319 2.558974 ACTCCCTCCTTTCCGGTTTAT 58.441 47.619 0.00 0.00 0.00 1.40
319 320 3.727948 ACTCCCTCCTTTCCGGTTTATA 58.272 45.455 0.00 0.00 0.00 0.98
320 321 3.710165 ACTCCCTCCTTTCCGGTTTATAG 59.290 47.826 0.00 0.00 0.00 1.31
321 322 3.043418 TCCCTCCTTTCCGGTTTATAGG 58.957 50.000 0.00 4.62 0.00 2.57
322 323 2.105993 CCCTCCTTTCCGGTTTATAGGG 59.894 54.545 16.03 16.03 36.05 3.53
323 324 2.486727 CCTCCTTTCCGGTTTATAGGGC 60.487 54.545 0.00 0.00 0.00 5.19
324 325 2.438392 CTCCTTTCCGGTTTATAGGGCT 59.562 50.000 0.00 0.00 0.00 5.19
325 326 2.848071 TCCTTTCCGGTTTATAGGGCTT 59.152 45.455 0.00 0.00 0.00 4.35
326 327 4.039339 TCCTTTCCGGTTTATAGGGCTTA 58.961 43.478 0.00 0.00 0.00 3.09
327 328 4.661709 TCCTTTCCGGTTTATAGGGCTTAT 59.338 41.667 0.00 0.00 0.00 1.73
328 329 5.133153 TCCTTTCCGGTTTATAGGGCTTATT 59.867 40.000 0.00 0.00 0.00 1.40
329 330 5.831525 CCTTTCCGGTTTATAGGGCTTATTT 59.168 40.000 0.00 0.00 0.00 1.40
330 331 6.016527 CCTTTCCGGTTTATAGGGCTTATTTC 60.017 42.308 0.00 0.00 0.00 2.17
331 332 5.633655 TCCGGTTTATAGGGCTTATTTCA 57.366 39.130 0.00 0.00 0.00 2.69
332 333 6.003859 TCCGGTTTATAGGGCTTATTTCAA 57.996 37.500 0.00 0.00 0.00 2.69
333 334 6.424883 TCCGGTTTATAGGGCTTATTTCAAA 58.575 36.000 0.00 0.00 0.00 2.69
334 335 6.890814 TCCGGTTTATAGGGCTTATTTCAAAA 59.109 34.615 0.00 0.00 0.00 2.44
335 336 7.562088 TCCGGTTTATAGGGCTTATTTCAAAAT 59.438 33.333 0.00 0.00 0.00 1.82
336 337 8.201464 CCGGTTTATAGGGCTTATTTCAAAATT 58.799 33.333 0.00 0.00 0.00 1.82
337 338 9.594478 CGGTTTATAGGGCTTATTTCAAAATTT 57.406 29.630 0.00 0.00 0.00 1.82
368 369 9.447157 TTTTCCATTTTATAAGGCTCAATTTGG 57.553 29.630 0.00 0.00 0.00 3.28
369 370 7.732222 TCCATTTTATAAGGCTCAATTTGGT 57.268 32.000 0.00 0.00 0.00 3.67
370 371 8.144862 TCCATTTTATAAGGCTCAATTTGGTT 57.855 30.769 0.00 0.00 0.00 3.67
371 372 9.261035 TCCATTTTATAAGGCTCAATTTGGTTA 57.739 29.630 0.00 0.00 0.00 2.85
378 379 6.432403 AAGGCTCAATTTGGTTATTTTCCA 57.568 33.333 0.00 0.00 0.00 3.53
379 380 6.625532 AGGCTCAATTTGGTTATTTTCCAT 57.374 33.333 0.00 0.00 34.75 3.41
380 381 6.643388 AGGCTCAATTTGGTTATTTTCCATC 58.357 36.000 0.00 0.00 34.75 3.51
381 382 6.213195 AGGCTCAATTTGGTTATTTTCCATCA 59.787 34.615 0.00 0.00 34.75 3.07
382 383 6.313658 GGCTCAATTTGGTTATTTTCCATCAC 59.686 38.462 0.00 0.00 34.75 3.06
383 384 6.873076 GCTCAATTTGGTTATTTTCCATCACA 59.127 34.615 0.00 0.00 34.75 3.58
384 385 7.550196 GCTCAATTTGGTTATTTTCCATCACAT 59.450 33.333 0.00 0.00 34.75 3.21
385 386 8.774890 TCAATTTGGTTATTTTCCATCACATG 57.225 30.769 0.00 0.00 34.75 3.21
386 387 8.373981 TCAATTTGGTTATTTTCCATCACATGT 58.626 29.630 0.00 0.00 34.75 3.21
387 388 9.001542 CAATTTGGTTATTTTCCATCACATGTT 57.998 29.630 0.00 0.00 34.75 2.71
388 389 9.571816 AATTTGGTTATTTTCCATCACATGTTT 57.428 25.926 0.00 0.00 34.75 2.83
390 391 9.703892 TTTGGTTATTTTCCATCACATGTTTAG 57.296 29.630 0.00 0.00 34.75 1.85
391 392 8.642935 TGGTTATTTTCCATCACATGTTTAGA 57.357 30.769 0.00 0.00 0.00 2.10
392 393 9.253832 TGGTTATTTTCCATCACATGTTTAGAT 57.746 29.630 0.00 0.00 0.00 1.98
398 399 9.695526 TTTTCCATCACATGTTTAGATTTCAAG 57.304 29.630 0.00 0.00 0.00 3.02
399 400 7.395190 TCCATCACATGTTTAGATTTCAAGG 57.605 36.000 0.00 0.00 0.00 3.61
400 401 6.947733 TCCATCACATGTTTAGATTTCAAGGT 59.052 34.615 0.00 0.00 0.00 3.50
401 402 7.031372 CCATCACATGTTTAGATTTCAAGGTG 58.969 38.462 0.00 0.00 0.00 4.00
402 403 6.012658 TCACATGTTTAGATTTCAAGGTGC 57.987 37.500 0.00 0.00 0.00 5.01
403 404 5.534278 TCACATGTTTAGATTTCAAGGTGCA 59.466 36.000 0.00 0.00 0.00 4.57
404 405 6.209192 TCACATGTTTAGATTTCAAGGTGCAT 59.791 34.615 0.00 0.00 0.00 3.96
405 406 6.869913 CACATGTTTAGATTTCAAGGTGCATT 59.130 34.615 0.00 0.00 0.00 3.56
406 407 8.028354 CACATGTTTAGATTTCAAGGTGCATTA 58.972 33.333 0.00 0.00 0.00 1.90
407 408 8.584157 ACATGTTTAGATTTCAAGGTGCATTAA 58.416 29.630 0.00 0.00 0.00 1.40
408 409 9.421806 CATGTTTAGATTTCAAGGTGCATTAAA 57.578 29.630 0.00 0.00 0.00 1.52
410 411 9.638239 TGTTTAGATTTCAAGGTGCATTAAATC 57.362 29.630 0.00 2.14 37.00 2.17
411 412 9.638239 GTTTAGATTTCAAGGTGCATTAAATCA 57.362 29.630 17.06 7.16 38.45 2.57
414 415 8.712285 AGATTTCAAGGTGCATTAAATCATTG 57.288 30.769 17.06 7.51 38.45 2.82
415 416 6.724694 TTTCAAGGTGCATTAAATCATTGC 57.275 33.333 0.00 0.00 36.91 3.56
416 417 5.402997 TCAAGGTGCATTAAATCATTGCA 57.597 34.783 0.00 0.00 43.63 4.08
417 418 5.979993 TCAAGGTGCATTAAATCATTGCAT 58.020 33.333 4.14 0.00 46.90 3.96
418 419 5.813157 TCAAGGTGCATTAAATCATTGCATG 59.187 36.000 4.14 0.11 46.90 4.06
419 420 4.124238 AGGTGCATTAAATCATTGCATGC 58.876 39.130 11.82 11.82 46.90 4.06
420 421 3.872182 GGTGCATTAAATCATTGCATGCA 59.128 39.130 18.46 18.46 46.90 3.96
421 422 4.333095 GGTGCATTAAATCATTGCATGCAA 59.667 37.500 33.57 33.57 46.90 4.08
422 423 5.498159 GTGCATTAAATCATTGCATGCAAG 58.502 37.500 34.15 25.40 46.90 4.01
423 424 5.064198 GTGCATTAAATCATTGCATGCAAGT 59.936 36.000 34.15 21.32 46.90 3.16
424 425 6.256104 GTGCATTAAATCATTGCATGCAAGTA 59.744 34.615 34.15 25.25 46.90 2.24
425 426 6.256104 TGCATTAAATCATTGCATGCAAGTAC 59.744 34.615 34.15 16.04 40.64 2.73
426 427 6.477688 GCATTAAATCATTGCATGCAAGTACT 59.522 34.615 34.15 17.88 39.47 2.73
427 428 7.648908 GCATTAAATCATTGCATGCAAGTACTA 59.351 33.333 34.15 19.61 39.47 1.82
428 429 9.518906 CATTAAATCATTGCATGCAAGTACTAA 57.481 29.630 34.15 25.16 39.47 2.24
429 430 9.740239 ATTAAATCATTGCATGCAAGTACTAAG 57.260 29.630 34.15 18.46 39.47 2.18
430 431 7.395190 AAATCATTGCATGCAAGTACTAAGA 57.605 32.000 34.15 22.13 39.47 2.10
431 432 6.615264 ATCATTGCATGCAAGTACTAAGAG 57.385 37.500 34.15 16.39 39.47 2.85
432 433 5.733676 TCATTGCATGCAAGTACTAAGAGA 58.266 37.500 34.15 18.04 39.47 3.10
433 434 6.172630 TCATTGCATGCAAGTACTAAGAGAA 58.827 36.000 34.15 10.64 39.47 2.87
434 435 6.654582 TCATTGCATGCAAGTACTAAGAGAAA 59.345 34.615 34.15 10.19 39.47 2.52
435 436 6.875948 TTGCATGCAAGTACTAAGAGAAAA 57.124 33.333 28.80 0.80 0.00 2.29
436 437 7.452880 TTGCATGCAAGTACTAAGAGAAAAT 57.547 32.000 28.80 0.00 0.00 1.82
437 438 7.452880 TGCATGCAAGTACTAAGAGAAAATT 57.547 32.000 20.30 0.00 0.00 1.82
438 439 7.307694 TGCATGCAAGTACTAAGAGAAAATTG 58.692 34.615 20.30 0.00 0.00 2.32
439 440 7.174772 TGCATGCAAGTACTAAGAGAAAATTGA 59.825 33.333 20.30 0.00 0.00 2.57
440 441 7.483059 GCATGCAAGTACTAAGAGAAAATTGAC 59.517 37.037 14.21 0.00 0.00 3.18
441 442 7.435068 TGCAAGTACTAAGAGAAAATTGACC 57.565 36.000 0.00 0.00 0.00 4.02
442 443 6.995686 TGCAAGTACTAAGAGAAAATTGACCA 59.004 34.615 0.00 0.00 0.00 4.02
443 444 7.500892 TGCAAGTACTAAGAGAAAATTGACCAA 59.499 33.333 0.00 0.00 0.00 3.67
444 445 8.515414 GCAAGTACTAAGAGAAAATTGACCAAT 58.485 33.333 0.00 0.00 0.00 3.16
445 446 9.831737 CAAGTACTAAGAGAAAATTGACCAATG 57.168 33.333 0.00 0.00 0.00 2.82
446 447 8.045176 AGTACTAAGAGAAAATTGACCAATGC 57.955 34.615 0.00 0.00 0.00 3.56
447 448 6.899393 ACTAAGAGAAAATTGACCAATGCA 57.101 33.333 0.00 0.00 0.00 3.96
448 449 7.472334 ACTAAGAGAAAATTGACCAATGCAT 57.528 32.000 0.00 0.00 0.00 3.96
449 450 7.318141 ACTAAGAGAAAATTGACCAATGCATG 58.682 34.615 0.00 0.00 0.00 4.06
450 451 5.733620 AGAGAAAATTGACCAATGCATGT 57.266 34.783 0.00 0.00 0.00 3.21
451 452 6.839124 AGAGAAAATTGACCAATGCATGTA 57.161 33.333 0.00 0.00 0.00 2.29
452 453 7.230849 AGAGAAAATTGACCAATGCATGTAA 57.769 32.000 0.00 0.00 0.00 2.41
453 454 7.844009 AGAGAAAATTGACCAATGCATGTAAT 58.156 30.769 0.00 0.00 0.00 1.89
454 455 8.316214 AGAGAAAATTGACCAATGCATGTAATT 58.684 29.630 0.00 0.83 0.00 1.40
455 456 8.851541 AGAAAATTGACCAATGCATGTAATTT 57.148 26.923 0.00 6.84 31.84 1.82
456 457 9.941325 AGAAAATTGACCAATGCATGTAATTTA 57.059 25.926 0.00 0.00 31.07 1.40
498 499 9.598517 CAATTAATGCATTGGTAACCATACTTT 57.401 29.630 22.27 0.00 31.53 2.66
523 524 9.612066 TTTTTGAGGAAAACAAGAGCATTAATT 57.388 25.926 0.00 0.00 32.44 1.40
524 525 8.592105 TTTGAGGAAAACAAGAGCATTAATTG 57.408 30.769 0.00 0.00 0.00 2.32
525 526 6.690530 TGAGGAAAACAAGAGCATTAATTGG 58.309 36.000 0.00 0.00 0.00 3.16
526 527 6.041423 AGGAAAACAAGAGCATTAATTGGG 57.959 37.500 0.00 0.00 0.00 4.12
527 528 5.543790 AGGAAAACAAGAGCATTAATTGGGT 59.456 36.000 0.00 0.00 0.00 4.51
528 529 5.639082 GGAAAACAAGAGCATTAATTGGGTG 59.361 40.000 0.00 0.00 0.00 4.61
529 530 5.806654 AAACAAGAGCATTAATTGGGTGT 57.193 34.783 0.00 0.00 0.00 4.16
530 531 5.806654 AACAAGAGCATTAATTGGGTGTT 57.193 34.783 0.00 0.00 0.00 3.32
531 532 5.806654 ACAAGAGCATTAATTGGGTGTTT 57.193 34.783 0.00 0.00 0.00 2.83
532 533 6.173427 ACAAGAGCATTAATTGGGTGTTTT 57.827 33.333 0.00 0.00 0.00 2.43
533 534 6.591001 ACAAGAGCATTAATTGGGTGTTTTT 58.409 32.000 0.00 0.00 0.00 1.94
534 535 6.482973 ACAAGAGCATTAATTGGGTGTTTTTG 59.517 34.615 0.00 0.00 0.00 2.44
535 536 4.996758 AGAGCATTAATTGGGTGTTTTTGC 59.003 37.500 0.00 0.00 0.00 3.68
536 537 4.712476 AGCATTAATTGGGTGTTTTTGCA 58.288 34.783 0.00 0.00 0.00 4.08
537 538 5.128919 AGCATTAATTGGGTGTTTTTGCAA 58.871 33.333 0.00 0.00 0.00 4.08
538 539 5.591877 AGCATTAATTGGGTGTTTTTGCAAA 59.408 32.000 8.05 8.05 0.00 3.68
539 540 5.685068 GCATTAATTGGGTGTTTTTGCAAAC 59.315 36.000 12.39 2.38 42.49 2.93
540 541 6.459435 GCATTAATTGGGTGTTTTTGCAAACT 60.459 34.615 12.39 0.00 42.61 2.66
541 542 7.254932 GCATTAATTGGGTGTTTTTGCAAACTA 60.255 33.333 12.39 0.00 42.61 2.24
542 543 7.541122 TTAATTGGGTGTTTTTGCAAACTAC 57.459 32.000 12.39 13.36 42.61 2.73
543 544 4.537135 TTGGGTGTTTTTGCAAACTACA 57.463 36.364 12.39 15.79 42.61 2.74
544 545 4.537135 TGGGTGTTTTTGCAAACTACAA 57.463 36.364 21.46 8.51 42.61 2.41
545 546 4.894784 TGGGTGTTTTTGCAAACTACAAA 58.105 34.783 21.46 8.19 42.61 2.83
546 547 5.305585 TGGGTGTTTTTGCAAACTACAAAA 58.694 33.333 21.46 7.56 43.33 2.44
572 573 9.872684 AAATATTCCACCACTCATCATTTATCT 57.127 29.630 0.00 0.00 0.00 1.98
573 574 9.872684 AATATTCCACCACTCATCATTTATCTT 57.127 29.630 0.00 0.00 0.00 2.40
574 575 7.578310 ATTCCACCACTCATCATTTATCTTG 57.422 36.000 0.00 0.00 0.00 3.02
575 576 5.439721 TCCACCACTCATCATTTATCTTGG 58.560 41.667 0.00 0.00 0.00 3.61
576 577 5.044919 TCCACCACTCATCATTTATCTTGGT 60.045 40.000 0.00 0.00 36.53 3.67
577 578 5.653769 CCACCACTCATCATTTATCTTGGTT 59.346 40.000 0.00 0.00 33.77 3.67
578 579 6.405065 CCACCACTCATCATTTATCTTGGTTG 60.405 42.308 0.00 0.00 33.77 3.77
579 580 5.653769 ACCACTCATCATTTATCTTGGTTGG 59.346 40.000 0.00 0.00 31.99 3.77
580 581 5.653769 CCACTCATCATTTATCTTGGTTGGT 59.346 40.000 0.00 0.00 0.00 3.67
581 582 6.828273 CCACTCATCATTTATCTTGGTTGGTA 59.172 38.462 0.00 0.00 0.00 3.25
582 583 7.339212 CCACTCATCATTTATCTTGGTTGGTAA 59.661 37.037 0.00 0.00 0.00 2.85
583 584 8.400947 CACTCATCATTTATCTTGGTTGGTAAG 58.599 37.037 0.00 0.00 0.00 2.34
584 585 8.328758 ACTCATCATTTATCTTGGTTGGTAAGA 58.671 33.333 0.00 0.00 38.42 2.10
585 586 9.177608 CTCATCATTTATCTTGGTTGGTAAGAA 57.822 33.333 0.00 0.00 37.67 2.52
586 587 9.699410 TCATCATTTATCTTGGTTGGTAAGAAT 57.301 29.630 0.00 0.00 37.67 2.40
595 596 8.885494 TCTTGGTTGGTAAGAATTTTGAATTG 57.115 30.769 0.00 0.00 31.62 2.32
596 597 8.700051 TCTTGGTTGGTAAGAATTTTGAATTGA 58.300 29.630 0.00 0.00 31.62 2.57
597 598 8.885494 TTGGTTGGTAAGAATTTTGAATTGAG 57.115 30.769 0.00 0.00 0.00 3.02
598 599 6.928492 TGGTTGGTAAGAATTTTGAATTGAGC 59.072 34.615 0.00 0.00 0.00 4.26
599 600 6.368791 GGTTGGTAAGAATTTTGAATTGAGCC 59.631 38.462 0.00 0.00 0.00 4.70
600 601 6.916360 TGGTAAGAATTTTGAATTGAGCCT 57.084 33.333 0.00 0.00 0.00 4.58
601 602 7.301868 TGGTAAGAATTTTGAATTGAGCCTT 57.698 32.000 0.00 0.00 0.00 4.35
602 603 8.415950 TGGTAAGAATTTTGAATTGAGCCTTA 57.584 30.769 0.00 0.00 0.00 2.69
603 604 9.034800 TGGTAAGAATTTTGAATTGAGCCTTAT 57.965 29.630 0.00 0.00 0.00 1.73
610 611 9.533253 AATTTTGAATTGAGCCTTATAAATCGG 57.467 29.630 0.00 0.00 0.00 4.18
611 612 7.873719 TTTGAATTGAGCCTTATAAATCGGA 57.126 32.000 0.00 0.00 0.00 4.55
612 613 7.873719 TTGAATTGAGCCTTATAAATCGGAA 57.126 32.000 0.00 0.00 0.00 4.30
613 614 7.873719 TGAATTGAGCCTTATAAATCGGAAA 57.126 32.000 0.00 0.00 0.00 3.13
614 615 7.930217 TGAATTGAGCCTTATAAATCGGAAAG 58.070 34.615 0.00 0.00 0.00 2.62
615 616 6.884280 ATTGAGCCTTATAAATCGGAAAGG 57.116 37.500 1.78 1.78 41.23 3.11
616 617 5.623956 TGAGCCTTATAAATCGGAAAGGA 57.376 39.130 9.13 0.00 40.85 3.36
617 618 5.611374 TGAGCCTTATAAATCGGAAAGGAG 58.389 41.667 9.13 0.00 40.85 3.69
618 619 4.974399 AGCCTTATAAATCGGAAAGGAGG 58.026 43.478 9.13 1.56 40.85 4.30
619 620 4.072839 GCCTTATAAATCGGAAAGGAGGG 58.927 47.826 9.13 0.00 40.85 4.30
620 621 4.202430 GCCTTATAAATCGGAAAGGAGGGA 60.202 45.833 9.13 0.00 40.85 4.20
621 622 5.552178 CCTTATAAATCGGAAAGGAGGGAG 58.448 45.833 0.01 0.00 40.85 4.30
622 623 5.071923 CCTTATAAATCGGAAAGGAGGGAGT 59.928 44.000 0.01 0.00 40.85 3.85
623 624 6.269307 CCTTATAAATCGGAAAGGAGGGAGTA 59.731 42.308 0.01 0.00 40.85 2.59
624 625 5.810080 ATAAATCGGAAAGGAGGGAGTAG 57.190 43.478 0.00 0.00 0.00 2.57
625 626 2.089600 ATCGGAAAGGAGGGAGTAGG 57.910 55.000 0.00 0.00 0.00 3.18
1057 1120 2.660064 GGAGATCTGGCCGTGGTGT 61.660 63.158 0.00 0.00 0.00 4.16
1068 1131 3.041940 GTGGTGTCCGTGGAAGCG 61.042 66.667 0.00 0.00 0.00 4.68
1281 1389 9.509855 CTGCTCGTCTTGATCCTTATATATTAC 57.490 37.037 0.00 0.00 0.00 1.89
1325 1433 1.434622 GGGCATCTGATGTGCTCGTG 61.435 60.000 18.19 0.00 42.16 4.35
1698 1818 2.262915 GGCGAGGAGGATATGGCG 59.737 66.667 0.00 0.00 0.00 5.69
1740 1860 4.069232 CTGGTCCTCGCCGAGCAA 62.069 66.667 9.01 0.00 39.61 3.91
2295 2415 5.345741 GCAACATTTTATGACATCGTTTGCT 59.654 36.000 0.00 0.00 32.75 3.91
2375 2495 1.402325 CGGTTGTAGCACGTCATCTCA 60.402 52.381 0.00 0.00 0.00 3.27
2401 2521 5.349270 CGGTTACAACATCCTTTATTGACGA 59.651 40.000 0.00 0.00 0.00 4.20
2413 2533 8.050778 TCCTTTATTGACGATTGTAGCATTTT 57.949 30.769 0.00 0.00 0.00 1.82
2426 2546 6.956299 TGTAGCATTTTAGTTAGAACGGTC 57.044 37.500 0.00 0.00 0.00 4.79
2428 2548 3.370061 AGCATTTTAGTTAGAACGGTCGC 59.630 43.478 0.00 0.00 0.00 5.19
2459 2579 0.038709 TTGTTGCTTGCAATACCGGC 60.039 50.000 11.32 0.00 0.00 6.13
2569 2694 6.777580 AGACACACCCTTTTGTTAATCTGAAT 59.222 34.615 0.00 0.00 0.00 2.57
2570 2695 7.942341 AGACACACCCTTTTGTTAATCTGAATA 59.058 33.333 0.00 0.00 0.00 1.75
2586 2712 3.664107 TGAATAACGCTTTCTGTGCTCT 58.336 40.909 0.00 0.00 0.00 4.09
2626 2752 0.176219 CACCCTGGCGTTACGGATTA 59.824 55.000 6.94 0.00 0.00 1.75
2633 2759 5.472148 CCTGGCGTTACGGATTATGTTATA 58.528 41.667 6.94 0.00 0.00 0.98
2669 2795 7.512297 CACAAGATGCATGAATTAAAACAACC 58.488 34.615 2.46 0.00 0.00 3.77
2744 2870 3.274288 CTGTCCTGGAAAATGCTACTCC 58.726 50.000 0.00 0.00 0.00 3.85
2889 3015 3.051081 AGCACAAAACTCTCCTAGCTG 57.949 47.619 0.00 0.00 0.00 4.24
2960 3086 4.652131 ACGACCAATGCCCGGCAA 62.652 61.111 18.00 0.00 43.62 4.52
2988 3114 0.603569 CACCAACACGACTCTAGGCT 59.396 55.000 0.00 0.00 0.00 4.58
3111 3237 1.003112 GGTCGTACATTGTGCCCCA 60.003 57.895 0.00 0.00 0.00 4.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.536489 CCCCTTTCTTCTCCTTCTTCCTTA 59.464 45.833 0.00 0.00 0.00 2.69
1 2 3.332187 CCCCTTTCTTCTCCTTCTTCCTT 59.668 47.826 0.00 0.00 0.00 3.36
3 4 2.913617 TCCCCTTTCTTCTCCTTCTTCC 59.086 50.000 0.00 0.00 0.00 3.46
4 5 4.642466 TTCCCCTTTCTTCTCCTTCTTC 57.358 45.455 0.00 0.00 0.00 2.87
5 6 5.328565 CAATTCCCCTTTCTTCTCCTTCTT 58.671 41.667 0.00 0.00 0.00 2.52
6 7 4.264128 CCAATTCCCCTTTCTTCTCCTTCT 60.264 45.833 0.00 0.00 0.00 2.85
7 8 4.019858 CCAATTCCCCTTTCTTCTCCTTC 58.980 47.826 0.00 0.00 0.00 3.46
8 9 3.819388 GCCAATTCCCCTTTCTTCTCCTT 60.819 47.826 0.00 0.00 0.00 3.36
9 10 2.291865 GCCAATTCCCCTTTCTTCTCCT 60.292 50.000 0.00 0.00 0.00 3.69
10 11 2.103373 GCCAATTCCCCTTTCTTCTCC 58.897 52.381 0.00 0.00 0.00 3.71
11 12 1.745653 CGCCAATTCCCCTTTCTTCTC 59.254 52.381 0.00 0.00 0.00 2.87
12 13 1.616994 CCGCCAATTCCCCTTTCTTCT 60.617 52.381 0.00 0.00 0.00 2.85
13 14 0.817654 CCGCCAATTCCCCTTTCTTC 59.182 55.000 0.00 0.00 0.00 2.87
14 15 0.407918 TCCGCCAATTCCCCTTTCTT 59.592 50.000 0.00 0.00 0.00 2.52
15 16 0.631212 ATCCGCCAATTCCCCTTTCT 59.369 50.000 0.00 0.00 0.00 2.52
16 17 1.032794 GATCCGCCAATTCCCCTTTC 58.967 55.000 0.00 0.00 0.00 2.62
17 18 0.631212 AGATCCGCCAATTCCCCTTT 59.369 50.000 0.00 0.00 0.00 3.11
18 19 0.106519 CAGATCCGCCAATTCCCCTT 60.107 55.000 0.00 0.00 0.00 3.95
19 20 1.533711 CAGATCCGCCAATTCCCCT 59.466 57.895 0.00 0.00 0.00 4.79
20 21 1.529244 CCAGATCCGCCAATTCCCC 60.529 63.158 0.00 0.00 0.00 4.81
21 22 0.106719 TTCCAGATCCGCCAATTCCC 60.107 55.000 0.00 0.00 0.00 3.97
22 23 1.134098 TCTTCCAGATCCGCCAATTCC 60.134 52.381 0.00 0.00 0.00 3.01
23 24 1.943340 GTCTTCCAGATCCGCCAATTC 59.057 52.381 0.00 0.00 0.00 2.17
24 25 1.561542 AGTCTTCCAGATCCGCCAATT 59.438 47.619 0.00 0.00 0.00 2.32
25 26 1.134280 CAGTCTTCCAGATCCGCCAAT 60.134 52.381 0.00 0.00 0.00 3.16
26 27 0.250234 CAGTCTTCCAGATCCGCCAA 59.750 55.000 0.00 0.00 0.00 4.52
27 28 1.900351 CAGTCTTCCAGATCCGCCA 59.100 57.895 0.00 0.00 0.00 5.69
28 29 1.522580 GCAGTCTTCCAGATCCGCC 60.523 63.158 0.00 0.00 0.00 6.13
29 30 1.522580 GGCAGTCTTCCAGATCCGC 60.523 63.158 0.00 0.00 0.00 5.54
30 31 1.144936 GGGCAGTCTTCCAGATCCG 59.855 63.158 0.00 0.00 0.00 4.18
31 32 0.179936 CAGGGCAGTCTTCCAGATCC 59.820 60.000 0.00 0.00 0.00 3.36
32 33 0.463474 GCAGGGCAGTCTTCCAGATC 60.463 60.000 0.00 0.00 0.00 2.75
33 34 0.913451 AGCAGGGCAGTCTTCCAGAT 60.913 55.000 0.00 0.00 0.00 2.90
34 35 1.537397 AGCAGGGCAGTCTTCCAGA 60.537 57.895 0.00 0.00 0.00 3.86
35 36 1.376942 CAGCAGGGCAGTCTTCCAG 60.377 63.158 0.00 0.00 0.00 3.86
36 37 2.752358 CAGCAGGGCAGTCTTCCA 59.248 61.111 0.00 0.00 0.00 3.53
37 38 2.749441 GCAGCAGGGCAGTCTTCC 60.749 66.667 0.00 0.00 0.00 3.46
38 39 3.123620 CGCAGCAGGGCAGTCTTC 61.124 66.667 0.00 0.00 0.00 2.87
39 40 4.711949 CCGCAGCAGGGCAGTCTT 62.712 66.667 0.00 0.00 0.00 3.01
53 54 0.462581 TCTCATCCATCTGCAACCGC 60.463 55.000 0.00 0.00 39.24 5.68
54 55 1.134580 ACTCTCATCCATCTGCAACCG 60.135 52.381 0.00 0.00 0.00 4.44
55 56 2.286872 CACTCTCATCCATCTGCAACC 58.713 52.381 0.00 0.00 0.00 3.77
56 57 1.669779 GCACTCTCATCCATCTGCAAC 59.330 52.381 0.00 0.00 0.00 4.17
57 58 1.741394 CGCACTCTCATCCATCTGCAA 60.741 52.381 0.00 0.00 0.00 4.08
58 59 0.179092 CGCACTCTCATCCATCTGCA 60.179 55.000 0.00 0.00 0.00 4.41
59 60 0.879400 CCGCACTCTCATCCATCTGC 60.879 60.000 0.00 0.00 0.00 4.26
60 61 0.463204 ACCGCACTCTCATCCATCTG 59.537 55.000 0.00 0.00 0.00 2.90
61 62 0.463204 CACCGCACTCTCATCCATCT 59.537 55.000 0.00 0.00 0.00 2.90
62 63 0.531532 CCACCGCACTCTCATCCATC 60.532 60.000 0.00 0.00 0.00 3.51
63 64 1.267574 ACCACCGCACTCTCATCCAT 61.268 55.000 0.00 0.00 0.00 3.41
64 65 1.913262 ACCACCGCACTCTCATCCA 60.913 57.895 0.00 0.00 0.00 3.41
65 66 1.448540 CACCACCGCACTCTCATCC 60.449 63.158 0.00 0.00 0.00 3.51
66 67 1.448540 CCACCACCGCACTCTCATC 60.449 63.158 0.00 0.00 0.00 2.92
67 68 2.665000 CCACCACCGCACTCTCAT 59.335 61.111 0.00 0.00 0.00 2.90
68 69 3.625897 CCCACCACCGCACTCTCA 61.626 66.667 0.00 0.00 0.00 3.27
69 70 4.394712 CCCCACCACCGCACTCTC 62.395 72.222 0.00 0.00 0.00 3.20
76 77 3.717294 CTTCCTCCCCCACCACCG 61.717 72.222 0.00 0.00 0.00 4.94
77 78 1.850755 TTCTTCCTCCCCCACCACC 60.851 63.158 0.00 0.00 0.00 4.61
78 79 1.134438 ACTTCTTCCTCCCCCACCAC 61.134 60.000 0.00 0.00 0.00 4.16
79 80 1.133809 CACTTCTTCCTCCCCCACCA 61.134 60.000 0.00 0.00 0.00 4.17
80 81 1.685820 CACTTCTTCCTCCCCCACC 59.314 63.158 0.00 0.00 0.00 4.61
81 82 1.685820 CCACTTCTTCCTCCCCCAC 59.314 63.158 0.00 0.00 0.00 4.61
82 83 1.541368 CCCACTTCTTCCTCCCCCA 60.541 63.158 0.00 0.00 0.00 4.96
83 84 2.309504 CCCCACTTCTTCCTCCCCC 61.310 68.421 0.00 0.00 0.00 5.40
84 85 1.541620 ACCCCACTTCTTCCTCCCC 60.542 63.158 0.00 0.00 0.00 4.81
85 86 1.685820 CACCCCACTTCTTCCTCCC 59.314 63.158 0.00 0.00 0.00 4.30
86 87 1.685820 CCACCCCACTTCTTCCTCC 59.314 63.158 0.00 0.00 0.00 4.30
87 88 1.134438 ACCCACCCCACTTCTTCCTC 61.134 60.000 0.00 0.00 0.00 3.71
88 89 0.701310 AACCCACCCCACTTCTTCCT 60.701 55.000 0.00 0.00 0.00 3.36
89 90 0.539669 CAACCCACCCCACTTCTTCC 60.540 60.000 0.00 0.00 0.00 3.46
90 91 0.539669 CCAACCCACCCCACTTCTTC 60.540 60.000 0.00 0.00 0.00 2.87
91 92 1.541672 CCAACCCACCCCACTTCTT 59.458 57.895 0.00 0.00 0.00 2.52
92 93 2.469765 CCCAACCCACCCCACTTCT 61.470 63.158 0.00 0.00 0.00 2.85
93 94 2.117423 CCCAACCCACCCCACTTC 59.883 66.667 0.00 0.00 0.00 3.01
94 95 3.517497 CCCCAACCCACCCCACTT 61.517 66.667 0.00 0.00 0.00 3.16
109 110 2.160853 ACCAAACCACCTCTCCCCC 61.161 63.158 0.00 0.00 0.00 5.40
110 111 1.074951 CACCAAACCACCTCTCCCC 59.925 63.158 0.00 0.00 0.00 4.81
111 112 1.074951 CCACCAAACCACCTCTCCC 59.925 63.158 0.00 0.00 0.00 4.30
112 113 1.074951 CCCACCAAACCACCTCTCC 59.925 63.158 0.00 0.00 0.00 3.71
113 114 1.074951 CCCCACCAAACCACCTCTC 59.925 63.158 0.00 0.00 0.00 3.20
114 115 1.386772 TCCCCACCAAACCACCTCT 60.387 57.895 0.00 0.00 0.00 3.69
115 116 1.228459 GTCCCCACCAAACCACCTC 60.228 63.158 0.00 0.00 0.00 3.85
116 117 2.774633 GGTCCCCACCAAACCACCT 61.775 63.158 0.00 0.00 43.17 4.00
117 118 2.203582 GGTCCCCACCAAACCACC 60.204 66.667 0.00 0.00 43.17 4.61
118 119 2.596338 CGGTCCCCACCAAACCAC 60.596 66.667 0.00 0.00 44.02 4.16
119 120 2.346284 CTTCGGTCCCCACCAAACCA 62.346 60.000 0.00 0.00 44.02 3.67
120 121 1.602605 CTTCGGTCCCCACCAAACC 60.603 63.158 0.00 0.00 44.02 3.27
121 122 1.602605 CCTTCGGTCCCCACCAAAC 60.603 63.158 0.00 0.00 44.02 2.93
122 123 2.840576 CCTTCGGTCCCCACCAAA 59.159 61.111 0.00 0.00 44.02 3.28
123 124 3.961414 GCCTTCGGTCCCCACCAA 61.961 66.667 0.00 0.00 44.02 3.67
124 125 4.974438 AGCCTTCGGTCCCCACCA 62.974 66.667 0.00 0.00 44.02 4.17
125 126 4.410400 CAGCCTTCGGTCCCCACC 62.410 72.222 0.00 0.00 39.69 4.61
144 145 2.901051 ATCCGTGTTAGGCCGAAGCG 62.901 60.000 13.15 13.15 41.24 4.68
145 146 1.153429 ATCCGTGTTAGGCCGAAGC 60.153 57.895 0.00 0.00 38.76 3.86
146 147 0.174845 TCATCCGTGTTAGGCCGAAG 59.825 55.000 0.00 0.00 0.00 3.79
147 148 0.174845 CTCATCCGTGTTAGGCCGAA 59.825 55.000 0.00 0.00 0.00 4.30
148 149 1.813859 CTCATCCGTGTTAGGCCGA 59.186 57.895 0.00 0.00 0.00 5.54
149 150 1.883084 GCTCATCCGTGTTAGGCCG 60.883 63.158 0.00 0.00 0.00 6.13
150 151 1.523938 GGCTCATCCGTGTTAGGCC 60.524 63.158 0.00 0.00 0.00 5.19
151 152 4.126524 GGCTCATCCGTGTTAGGC 57.873 61.111 0.00 0.00 0.00 3.93
160 161 1.524621 CCACATGGTCGGCTCATCC 60.525 63.158 0.00 0.00 0.00 3.51
161 162 2.182842 GCCACATGGTCGGCTCATC 61.183 63.158 14.00 0.00 45.29 2.92
162 163 2.124570 GCCACATGGTCGGCTCAT 60.125 61.111 14.00 0.00 45.29 2.90
167 168 2.747460 CAGGTGCCACATGGTCGG 60.747 66.667 0.61 0.00 37.57 4.79
168 169 2.747460 CCAGGTGCCACATGGTCG 60.747 66.667 20.02 0.00 44.42 4.79
182 183 3.248446 TTTTCGTCCCTCGCCCCAG 62.248 63.158 0.00 0.00 39.67 4.45
183 184 3.243053 TTTTCGTCCCTCGCCCCA 61.243 61.111 0.00 0.00 39.67 4.96
184 185 2.745100 GTTTTCGTCCCTCGCCCC 60.745 66.667 0.00 0.00 39.67 5.80
185 186 3.116531 CGTTTTCGTCCCTCGCCC 61.117 66.667 0.00 0.00 39.67 6.13
186 187 2.048877 TCGTTTTCGTCCCTCGCC 60.049 61.111 0.00 0.00 44.46 5.54
187 188 2.378084 GGTCGTTTTCGTCCCTCGC 61.378 63.158 0.00 0.00 43.55 5.03
188 189 2.084681 CGGTCGTTTTCGTCCCTCG 61.085 63.158 0.00 0.00 45.76 4.63
189 190 2.378084 GCGGTCGTTTTCGTCCCTC 61.378 63.158 0.00 0.00 45.76 4.30
190 191 2.356673 GCGGTCGTTTTCGTCCCT 60.357 61.111 0.00 0.00 45.76 4.20
191 192 3.770424 CGCGGTCGTTTTCGTCCC 61.770 66.667 0.00 0.00 45.76 4.46
192 193 4.419957 GCGCGGTCGTTTTCGTCC 62.420 66.667 8.83 0.00 45.25 4.79
193 194 4.748083 CGCGCGGTCGTTTTCGTC 62.748 66.667 24.84 0.00 44.46 4.20
195 196 4.748083 GTCGCGCGGTCGTTTTCG 62.748 66.667 31.69 0.00 45.64 3.46
196 197 3.694394 TGTCGCGCGGTCGTTTTC 61.694 61.111 31.69 10.50 38.14 2.29
197 198 3.992019 GTGTCGCGCGGTCGTTTT 61.992 61.111 31.69 0.00 38.14 2.43
208 209 2.669808 ATCGATCGCTCAGGTGTCGC 62.670 60.000 11.09 0.00 32.74 5.19
209 210 0.658829 GATCGATCGCTCAGGTGTCG 60.659 60.000 13.78 0.00 0.00 4.35
210 211 0.658829 CGATCGATCGCTCAGGTGTC 60.659 60.000 32.34 0.00 43.84 3.67
211 212 1.356979 CGATCGATCGCTCAGGTGT 59.643 57.895 32.34 0.00 43.84 4.16
212 213 4.218597 CGATCGATCGCTCAGGTG 57.781 61.111 32.34 6.58 43.84 4.00
224 225 2.627061 CGTCGTTGGATCGCGATCG 61.627 63.158 35.36 26.99 39.38 3.69
225 226 2.917656 GCGTCGTTGGATCGCGATC 61.918 63.158 35.42 35.42 40.51 3.69
226 227 2.954868 GCGTCGTTGGATCGCGAT 60.955 61.111 23.97 23.97 40.51 4.58
230 231 1.443702 TGTCTGCGTCGTTGGATCG 60.444 57.895 0.00 0.00 0.00 3.69
231 232 1.674611 CGTGTCTGCGTCGTTGGATC 61.675 60.000 0.00 0.00 0.00 3.36
232 233 1.733041 CGTGTCTGCGTCGTTGGAT 60.733 57.895 0.00 0.00 0.00 3.41
233 234 2.354188 CGTGTCTGCGTCGTTGGA 60.354 61.111 0.00 0.00 0.00 3.53
234 235 4.059459 GCGTGTCTGCGTCGTTGG 62.059 66.667 0.00 0.00 0.00 3.77
242 243 4.064491 GAGCACACGCGTGTCTGC 62.064 66.667 39.88 36.83 45.50 4.26
243 244 2.355126 AGAGCACACGCGTGTCTG 60.355 61.111 39.88 29.99 45.50 3.51
244 245 1.792118 TACAGAGCACACGCGTGTCT 61.792 55.000 39.88 34.47 45.50 3.41
245 246 0.937699 TTACAGAGCACACGCGTGTC 60.938 55.000 39.88 31.02 45.50 3.67
246 247 0.939577 CTTACAGAGCACACGCGTGT 60.940 55.000 37.52 37.52 45.50 4.49
247 248 0.663269 TCTTACAGAGCACACGCGTG 60.663 55.000 35.99 35.99 46.56 5.34
248 249 0.663568 GTCTTACAGAGCACACGCGT 60.664 55.000 5.58 5.58 45.49 6.01
249 250 0.663269 TGTCTTACAGAGCACACGCG 60.663 55.000 3.53 3.53 45.49 6.01
250 251 1.497991 TTGTCTTACAGAGCACACGC 58.502 50.000 0.00 0.00 38.99 5.34
251 252 2.097396 CGTTTGTCTTACAGAGCACACG 60.097 50.000 0.00 0.00 33.12 4.49
252 253 3.120792 TCGTTTGTCTTACAGAGCACAC 58.879 45.455 0.00 0.00 0.00 3.82
253 254 3.381045 CTCGTTTGTCTTACAGAGCACA 58.619 45.455 0.00 0.00 0.00 4.57
257 258 2.989840 CTGGCTCGTTTGTCTTACAGAG 59.010 50.000 0.00 0.00 0.00 3.35
258 259 2.866460 GCTGGCTCGTTTGTCTTACAGA 60.866 50.000 0.00 0.00 0.00 3.41
259 260 1.461127 GCTGGCTCGTTTGTCTTACAG 59.539 52.381 0.00 0.00 0.00 2.74
260 261 1.508632 GCTGGCTCGTTTGTCTTACA 58.491 50.000 0.00 0.00 0.00 2.41
261 262 0.438830 CGCTGGCTCGTTTGTCTTAC 59.561 55.000 0.00 0.00 0.00 2.34
262 263 0.315886 TCGCTGGCTCGTTTGTCTTA 59.684 50.000 0.33 0.00 0.00 2.10
263 264 0.946221 CTCGCTGGCTCGTTTGTCTT 60.946 55.000 0.33 0.00 0.00 3.01
264 265 1.373497 CTCGCTGGCTCGTTTGTCT 60.373 57.895 0.33 0.00 0.00 3.41
265 266 3.016474 GCTCGCTGGCTCGTTTGTC 62.016 63.158 0.33 0.00 0.00 3.18
266 267 3.044305 GCTCGCTGGCTCGTTTGT 61.044 61.111 0.33 0.00 0.00 2.83
267 268 3.043713 TGCTCGCTGGCTCGTTTG 61.044 61.111 0.00 0.00 0.00 2.93
268 269 2.996168 AAGTGCTCGCTGGCTCGTTT 62.996 55.000 0.00 0.00 0.00 3.60
269 270 2.996168 AAAGTGCTCGCTGGCTCGTT 62.996 55.000 0.00 0.00 0.00 3.85
270 271 2.996168 AAAAGTGCTCGCTGGCTCGT 62.996 55.000 0.00 0.00 0.00 4.18
271 272 1.845809 AAAAAGTGCTCGCTGGCTCG 61.846 55.000 0.00 0.00 0.00 5.03
272 273 1.129437 CTAAAAAGTGCTCGCTGGCTC 59.871 52.381 0.00 0.00 0.00 4.70
273 274 1.160137 CTAAAAAGTGCTCGCTGGCT 58.840 50.000 0.00 0.00 0.00 4.75
274 275 0.169009 CCTAAAAAGTGCTCGCTGGC 59.831 55.000 0.00 0.00 0.00 4.85
275 276 1.523758 ACCTAAAAAGTGCTCGCTGG 58.476 50.000 0.00 0.00 0.00 4.85
276 277 3.626028 AAACCTAAAAAGTGCTCGCTG 57.374 42.857 0.00 0.00 0.00 5.18
277 278 4.820173 AGTAAAACCTAAAAAGTGCTCGCT 59.180 37.500 0.00 0.00 0.00 4.93
278 279 5.104562 AGTAAAACCTAAAAAGTGCTCGC 57.895 39.130 0.00 0.00 0.00 5.03
279 280 5.334646 GGGAGTAAAACCTAAAAAGTGCTCG 60.335 44.000 0.00 0.00 0.00 5.03
280 281 5.768662 AGGGAGTAAAACCTAAAAAGTGCTC 59.231 40.000 0.00 0.00 34.71 4.26
281 282 5.702266 AGGGAGTAAAACCTAAAAAGTGCT 58.298 37.500 0.00 0.00 34.71 4.40
282 283 5.048224 GGAGGGAGTAAAACCTAAAAAGTGC 60.048 44.000 0.00 0.00 37.18 4.40
283 284 6.304624 AGGAGGGAGTAAAACCTAAAAAGTG 58.695 40.000 0.00 0.00 37.18 3.16
284 285 6.526056 AGGAGGGAGTAAAACCTAAAAAGT 57.474 37.500 0.00 0.00 37.18 2.66
285 286 7.039923 GGAAAGGAGGGAGTAAAACCTAAAAAG 60.040 40.741 0.00 0.00 37.18 2.27
286 287 6.779049 GGAAAGGAGGGAGTAAAACCTAAAAA 59.221 38.462 0.00 0.00 37.18 1.94
287 288 6.309357 GGAAAGGAGGGAGTAAAACCTAAAA 58.691 40.000 0.00 0.00 37.18 1.52
288 289 5.513614 CGGAAAGGAGGGAGTAAAACCTAAA 60.514 44.000 0.00 0.00 37.18 1.85
289 290 4.019950 CGGAAAGGAGGGAGTAAAACCTAA 60.020 45.833 0.00 0.00 37.18 2.69
290 291 3.516700 CGGAAAGGAGGGAGTAAAACCTA 59.483 47.826 0.00 0.00 37.18 3.08
291 292 2.305052 CGGAAAGGAGGGAGTAAAACCT 59.695 50.000 0.00 0.00 40.54 3.50
292 293 2.617276 CCGGAAAGGAGGGAGTAAAACC 60.617 54.545 0.00 0.00 45.00 3.27
293 294 2.039480 ACCGGAAAGGAGGGAGTAAAAC 59.961 50.000 9.46 0.00 45.00 2.43
294 295 2.341695 ACCGGAAAGGAGGGAGTAAAA 58.658 47.619 9.46 0.00 45.00 1.52
295 296 2.034436 ACCGGAAAGGAGGGAGTAAA 57.966 50.000 9.46 0.00 45.00 2.01
296 297 2.034436 AACCGGAAAGGAGGGAGTAA 57.966 50.000 9.46 0.00 45.00 2.24
297 298 2.034436 AAACCGGAAAGGAGGGAGTA 57.966 50.000 9.46 0.00 45.00 2.59
298 299 2.034436 TAAACCGGAAAGGAGGGAGT 57.966 50.000 9.46 0.00 45.00 3.85
299 300 3.071167 CCTATAAACCGGAAAGGAGGGAG 59.929 52.174 9.46 0.00 45.00 4.30
300 301 3.043418 CCTATAAACCGGAAAGGAGGGA 58.957 50.000 9.46 0.00 45.00 4.20
301 302 2.105993 CCCTATAAACCGGAAAGGAGGG 59.894 54.545 9.46 14.71 45.00 4.30
302 303 2.486727 GCCCTATAAACCGGAAAGGAGG 60.487 54.545 9.46 9.03 45.00 4.30
303 304 2.438392 AGCCCTATAAACCGGAAAGGAG 59.562 50.000 9.46 0.00 45.00 3.69
304 305 2.484602 AGCCCTATAAACCGGAAAGGA 58.515 47.619 9.46 0.00 45.00 3.36
306 307 6.544564 TGAAATAAGCCCTATAAACCGGAAAG 59.455 38.462 9.46 0.00 0.00 2.62
307 308 6.424883 TGAAATAAGCCCTATAAACCGGAAA 58.575 36.000 9.46 0.00 0.00 3.13
308 309 6.003859 TGAAATAAGCCCTATAAACCGGAA 57.996 37.500 9.46 0.00 0.00 4.30
309 310 5.633655 TGAAATAAGCCCTATAAACCGGA 57.366 39.130 9.46 0.00 0.00 5.14
310 311 6.702716 TTTGAAATAAGCCCTATAAACCGG 57.297 37.500 0.00 0.00 0.00 5.28
311 312 9.594478 AAATTTTGAAATAAGCCCTATAAACCG 57.406 29.630 0.00 0.00 0.00 4.44
342 343 9.447157 CCAAATTGAGCCTTATAAAATGGAAAA 57.553 29.630 0.00 0.00 0.00 2.29
343 344 8.601546 ACCAAATTGAGCCTTATAAAATGGAAA 58.398 29.630 0.00 0.00 0.00 3.13
344 345 8.144862 ACCAAATTGAGCCTTATAAAATGGAA 57.855 30.769 0.00 0.00 0.00 3.53
345 346 7.732222 ACCAAATTGAGCCTTATAAAATGGA 57.268 32.000 0.00 0.00 0.00 3.41
352 353 9.261035 TGGAAAATAACCAAATTGAGCCTTATA 57.739 29.630 0.00 0.00 34.25 0.98
353 354 8.144862 TGGAAAATAACCAAATTGAGCCTTAT 57.855 30.769 0.00 0.00 34.25 1.73
354 355 7.546250 TGGAAAATAACCAAATTGAGCCTTA 57.454 32.000 0.00 0.00 34.25 2.69
355 356 6.432403 TGGAAAATAACCAAATTGAGCCTT 57.568 33.333 0.00 0.00 34.25 4.35
356 357 6.213195 TGATGGAAAATAACCAAATTGAGCCT 59.787 34.615 0.00 0.00 40.93 4.58
357 358 6.313658 GTGATGGAAAATAACCAAATTGAGCC 59.686 38.462 0.00 0.00 40.93 4.70
358 359 6.873076 TGTGATGGAAAATAACCAAATTGAGC 59.127 34.615 0.00 0.00 40.93 4.26
359 360 8.875803 CATGTGATGGAAAATAACCAAATTGAG 58.124 33.333 0.00 0.00 40.93 3.02
360 361 8.373981 ACATGTGATGGAAAATAACCAAATTGA 58.626 29.630 0.00 0.00 40.93 2.57
361 362 8.550710 ACATGTGATGGAAAATAACCAAATTG 57.449 30.769 0.00 0.00 40.93 2.32
362 363 9.571816 AAACATGTGATGGAAAATAACCAAATT 57.428 25.926 0.00 0.00 40.93 1.82
364 365 9.703892 CTAAACATGTGATGGAAAATAACCAAA 57.296 29.630 0.00 0.00 40.93 3.28
365 366 9.083422 TCTAAACATGTGATGGAAAATAACCAA 57.917 29.630 0.00 0.00 40.93 3.67
366 367 8.642935 TCTAAACATGTGATGGAAAATAACCA 57.357 30.769 0.00 0.00 41.83 3.67
372 373 9.695526 CTTGAAATCTAAACATGTGATGGAAAA 57.304 29.630 0.00 0.00 33.60 2.29
373 374 8.306038 CCTTGAAATCTAAACATGTGATGGAAA 58.694 33.333 0.00 0.00 33.60 3.13
374 375 7.451255 ACCTTGAAATCTAAACATGTGATGGAA 59.549 33.333 0.00 0.00 33.60 3.53
375 376 6.947733 ACCTTGAAATCTAAACATGTGATGGA 59.052 34.615 0.00 0.00 33.60 3.41
376 377 7.031372 CACCTTGAAATCTAAACATGTGATGG 58.969 38.462 0.00 0.00 33.60 3.51
377 378 6.529125 GCACCTTGAAATCTAAACATGTGATG 59.471 38.462 0.00 0.00 0.00 3.07
378 379 6.209192 TGCACCTTGAAATCTAAACATGTGAT 59.791 34.615 0.00 0.00 0.00 3.06
379 380 5.534278 TGCACCTTGAAATCTAAACATGTGA 59.466 36.000 0.00 0.00 0.00 3.58
380 381 5.771469 TGCACCTTGAAATCTAAACATGTG 58.229 37.500 0.00 0.00 0.00 3.21
381 382 6.594788 ATGCACCTTGAAATCTAAACATGT 57.405 33.333 0.00 0.00 0.00 3.21
382 383 8.984891 TTAATGCACCTTGAAATCTAAACATG 57.015 30.769 0.00 0.00 0.00 3.21
384 385 9.638239 GATTTAATGCACCTTGAAATCTAAACA 57.362 29.630 0.00 0.00 34.91 2.83
385 386 9.638239 TGATTTAATGCACCTTGAAATCTAAAC 57.362 29.630 15.69 0.00 37.39 2.01
388 389 9.806203 CAATGATTTAATGCACCTTGAAATCTA 57.194 29.630 15.69 7.80 37.39 1.98
389 390 7.279313 GCAATGATTTAATGCACCTTGAAATCT 59.721 33.333 15.69 5.35 39.81 2.40
390 391 7.064847 TGCAATGATTTAATGCACCTTGAAATC 59.935 33.333 0.00 1.22 44.52 2.17
391 392 6.879993 TGCAATGATTTAATGCACCTTGAAAT 59.120 30.769 0.00 0.00 44.52 2.17
392 393 6.228995 TGCAATGATTTAATGCACCTTGAAA 58.771 32.000 0.00 0.00 44.52 2.69
393 394 5.791666 TGCAATGATTTAATGCACCTTGAA 58.208 33.333 0.00 0.00 44.52 2.69
394 395 5.402997 TGCAATGATTTAATGCACCTTGA 57.597 34.783 0.00 0.00 44.52 3.02
411 412 7.452880 TTTTCTCTTAGTACTTGCATGCAAT 57.547 32.000 31.96 22.79 35.20 3.56
412 413 6.875948 TTTTCTCTTAGTACTTGCATGCAA 57.124 33.333 30.12 30.12 0.00 4.08
413 414 7.174772 TCAATTTTCTCTTAGTACTTGCATGCA 59.825 33.333 18.46 18.46 0.00 3.96
414 415 7.483059 GTCAATTTTCTCTTAGTACTTGCATGC 59.517 37.037 11.82 11.82 0.00 4.06
415 416 7.965107 GGTCAATTTTCTCTTAGTACTTGCATG 59.035 37.037 0.00 0.00 0.00 4.06
416 417 7.665559 TGGTCAATTTTCTCTTAGTACTTGCAT 59.334 33.333 0.00 0.00 0.00 3.96
417 418 6.995686 TGGTCAATTTTCTCTTAGTACTTGCA 59.004 34.615 0.00 0.00 0.00 4.08
418 419 7.435068 TGGTCAATTTTCTCTTAGTACTTGC 57.565 36.000 0.00 0.00 0.00 4.01
419 420 9.831737 CATTGGTCAATTTTCTCTTAGTACTTG 57.168 33.333 0.00 0.00 0.00 3.16
420 421 8.515414 GCATTGGTCAATTTTCTCTTAGTACTT 58.485 33.333 0.00 0.00 0.00 2.24
421 422 7.665559 TGCATTGGTCAATTTTCTCTTAGTACT 59.334 33.333 0.00 0.00 0.00 2.73
422 423 7.816640 TGCATTGGTCAATTTTCTCTTAGTAC 58.183 34.615 0.00 0.00 0.00 2.73
423 424 7.994425 TGCATTGGTCAATTTTCTCTTAGTA 57.006 32.000 0.00 0.00 0.00 1.82
424 425 6.899393 TGCATTGGTCAATTTTCTCTTAGT 57.101 33.333 0.00 0.00 0.00 2.24
425 426 7.318141 ACATGCATTGGTCAATTTTCTCTTAG 58.682 34.615 0.00 0.00 0.00 2.18
426 427 7.230849 ACATGCATTGGTCAATTTTCTCTTA 57.769 32.000 0.00 0.00 0.00 2.10
427 428 6.105397 ACATGCATTGGTCAATTTTCTCTT 57.895 33.333 0.00 0.00 0.00 2.85
428 429 5.733620 ACATGCATTGGTCAATTTTCTCT 57.266 34.783 0.00 0.00 0.00 3.10
429 430 8.483307 AATTACATGCATTGGTCAATTTTCTC 57.517 30.769 0.00 0.00 0.00 2.87
430 431 8.851541 AAATTACATGCATTGGTCAATTTTCT 57.148 26.923 0.00 0.00 28.85 2.52
433 434 8.614346 GCATAAATTACATGCATTGGTCAATTT 58.386 29.630 16.27 7.43 46.47 1.82
434 435 8.145316 GCATAAATTACATGCATTGGTCAATT 57.855 30.769 16.27 0.00 46.47 2.32
435 436 7.718272 GCATAAATTACATGCATTGGTCAAT 57.282 32.000 16.27 0.00 46.47 2.57
471 472 7.209475 AGTATGGTTACCAATGCATTAATTGC 58.791 34.615 12.53 2.99 44.23 3.56
472 473 9.598517 AAAGTATGGTTACCAATGCATTAATTG 57.401 29.630 12.53 0.61 36.95 2.32
497 498 9.612066 AATTAATGCTCTTGTTTTCCTCAAAAA 57.388 25.926 0.00 0.00 33.17 1.94
498 499 9.044150 CAATTAATGCTCTTGTTTTCCTCAAAA 57.956 29.630 0.00 0.00 0.00 2.44
499 500 7.656948 CCAATTAATGCTCTTGTTTTCCTCAAA 59.343 33.333 0.00 0.00 0.00 2.69
500 501 7.153985 CCAATTAATGCTCTTGTTTTCCTCAA 58.846 34.615 0.00 0.00 0.00 3.02
501 502 6.295236 CCCAATTAATGCTCTTGTTTTCCTCA 60.295 38.462 0.00 0.00 0.00 3.86
502 503 6.101997 CCCAATTAATGCTCTTGTTTTCCTC 58.898 40.000 0.00 0.00 0.00 3.71
503 504 5.543790 ACCCAATTAATGCTCTTGTTTTCCT 59.456 36.000 0.00 0.00 0.00 3.36
504 505 5.639082 CACCCAATTAATGCTCTTGTTTTCC 59.361 40.000 0.00 0.00 0.00 3.13
505 506 6.223120 ACACCCAATTAATGCTCTTGTTTTC 58.777 36.000 0.00 0.00 0.00 2.29
506 507 6.173427 ACACCCAATTAATGCTCTTGTTTT 57.827 33.333 0.00 0.00 0.00 2.43
507 508 5.806654 ACACCCAATTAATGCTCTTGTTT 57.193 34.783 0.00 0.00 0.00 2.83
508 509 5.806654 AACACCCAATTAATGCTCTTGTT 57.193 34.783 0.00 0.00 0.00 2.83
509 510 5.806654 AAACACCCAATTAATGCTCTTGT 57.193 34.783 0.00 0.00 0.00 3.16
510 511 6.566376 GCAAAAACACCCAATTAATGCTCTTG 60.566 38.462 0.00 0.00 0.00 3.02
511 512 5.469760 GCAAAAACACCCAATTAATGCTCTT 59.530 36.000 0.00 0.00 0.00 2.85
512 513 4.996758 GCAAAAACACCCAATTAATGCTCT 59.003 37.500 0.00 0.00 0.00 4.09
513 514 4.754114 TGCAAAAACACCCAATTAATGCTC 59.246 37.500 0.00 0.00 32.74 4.26
514 515 4.712476 TGCAAAAACACCCAATTAATGCT 58.288 34.783 0.00 0.00 32.74 3.79
515 516 5.429957 TTGCAAAAACACCCAATTAATGC 57.570 34.783 0.00 0.00 0.00 3.56
516 517 7.025485 AGTTTGCAAAAACACCCAATTAATG 57.975 32.000 14.67 0.00 35.20 1.90
517 518 7.770897 TGTAGTTTGCAAAAACACCCAATTAAT 59.229 29.630 14.67 0.00 35.20 1.40
518 519 7.103641 TGTAGTTTGCAAAAACACCCAATTAA 58.896 30.769 14.67 0.00 35.20 1.40
519 520 6.640518 TGTAGTTTGCAAAAACACCCAATTA 58.359 32.000 14.67 0.00 35.20 1.40
520 521 5.491982 TGTAGTTTGCAAAAACACCCAATT 58.508 33.333 14.67 0.00 35.20 2.32
521 522 5.091261 TGTAGTTTGCAAAAACACCCAAT 57.909 34.783 14.67 0.00 35.20 3.16
522 523 4.537135 TGTAGTTTGCAAAAACACCCAA 57.463 36.364 14.67 0.00 35.20 4.12
523 524 4.537135 TTGTAGTTTGCAAAAACACCCA 57.463 36.364 21.86 10.06 35.20 4.51
524 525 5.864628 TTTTGTAGTTTGCAAAAACACCC 57.135 34.783 21.86 7.44 41.18 4.61
546 547 9.872684 AGATAAATGATGAGTGGTGGAATATTT 57.127 29.630 0.00 0.00 0.00 1.40
547 548 9.872684 AAGATAAATGATGAGTGGTGGAATATT 57.127 29.630 0.00 0.00 0.00 1.28
548 549 9.293404 CAAGATAAATGATGAGTGGTGGAATAT 57.707 33.333 0.00 0.00 0.00 1.28
549 550 7.720957 CCAAGATAAATGATGAGTGGTGGAATA 59.279 37.037 0.00 0.00 0.00 1.75
550 551 6.548622 CCAAGATAAATGATGAGTGGTGGAAT 59.451 38.462 0.00 0.00 0.00 3.01
551 552 5.887598 CCAAGATAAATGATGAGTGGTGGAA 59.112 40.000 0.00 0.00 0.00 3.53
552 553 5.044919 ACCAAGATAAATGATGAGTGGTGGA 60.045 40.000 0.00 0.00 36.77 4.02
553 554 5.195940 ACCAAGATAAATGATGAGTGGTGG 58.804 41.667 0.00 0.00 36.77 4.61
554 555 6.405065 CCAACCAAGATAAATGATGAGTGGTG 60.405 42.308 0.00 0.00 38.14 4.17
555 556 5.653769 CCAACCAAGATAAATGATGAGTGGT 59.346 40.000 0.00 0.00 39.79 4.16
556 557 5.653769 ACCAACCAAGATAAATGATGAGTGG 59.346 40.000 0.00 0.00 0.00 4.00
557 558 6.764308 ACCAACCAAGATAAATGATGAGTG 57.236 37.500 0.00 0.00 0.00 3.51
558 559 8.328758 TCTTACCAACCAAGATAAATGATGAGT 58.671 33.333 0.00 0.00 0.00 3.41
559 560 8.737168 TCTTACCAACCAAGATAAATGATGAG 57.263 34.615 0.00 0.00 0.00 2.90
560 561 9.699410 ATTCTTACCAACCAAGATAAATGATGA 57.301 29.630 0.00 0.00 32.27 2.92
569 570 9.492973 CAATTCAAAATTCTTACCAACCAAGAT 57.507 29.630 0.00 0.00 32.27 2.40
570 571 8.700051 TCAATTCAAAATTCTTACCAACCAAGA 58.300 29.630 0.00 0.00 0.00 3.02
571 572 8.885494 TCAATTCAAAATTCTTACCAACCAAG 57.115 30.769 0.00 0.00 0.00 3.61
572 573 7.440856 GCTCAATTCAAAATTCTTACCAACCAA 59.559 33.333 0.00 0.00 0.00 3.67
573 574 6.928492 GCTCAATTCAAAATTCTTACCAACCA 59.072 34.615 0.00 0.00 0.00 3.67
574 575 6.368791 GGCTCAATTCAAAATTCTTACCAACC 59.631 38.462 0.00 0.00 0.00 3.77
575 576 7.154656 AGGCTCAATTCAAAATTCTTACCAAC 58.845 34.615 0.00 0.00 0.00 3.77
576 577 7.301868 AGGCTCAATTCAAAATTCTTACCAA 57.698 32.000 0.00 0.00 0.00 3.67
577 578 6.916360 AGGCTCAATTCAAAATTCTTACCA 57.084 33.333 0.00 0.00 0.00 3.25
584 585 9.533253 CCGATTTATAAGGCTCAATTCAAAATT 57.467 29.630 0.00 0.00 0.00 1.82
585 586 8.912988 TCCGATTTATAAGGCTCAATTCAAAAT 58.087 29.630 0.00 0.00 0.00 1.82
586 587 8.287439 TCCGATTTATAAGGCTCAATTCAAAA 57.713 30.769 0.00 0.00 0.00 2.44
587 588 7.873719 TCCGATTTATAAGGCTCAATTCAAA 57.126 32.000 0.00 0.00 0.00 2.69
588 589 7.873719 TTCCGATTTATAAGGCTCAATTCAA 57.126 32.000 0.00 0.00 0.00 2.69
589 590 7.013274 CCTTTCCGATTTATAAGGCTCAATTCA 59.987 37.037 0.00 0.00 31.59 2.57
590 591 7.228706 TCCTTTCCGATTTATAAGGCTCAATTC 59.771 37.037 0.00 0.00 37.62 2.17
591 592 7.060421 TCCTTTCCGATTTATAAGGCTCAATT 58.940 34.615 0.00 0.00 37.62 2.32
592 593 6.601332 TCCTTTCCGATTTATAAGGCTCAAT 58.399 36.000 0.00 0.00 37.62 2.57
593 594 5.996644 TCCTTTCCGATTTATAAGGCTCAA 58.003 37.500 0.00 0.00 37.62 3.02
594 595 5.454755 CCTCCTTTCCGATTTATAAGGCTCA 60.455 44.000 0.00 0.00 37.62 4.26
595 596 4.998033 CCTCCTTTCCGATTTATAAGGCTC 59.002 45.833 0.00 0.00 37.62 4.70
596 597 4.202472 CCCTCCTTTCCGATTTATAAGGCT 60.202 45.833 0.00 0.00 37.62 4.58
597 598 4.072839 CCCTCCTTTCCGATTTATAAGGC 58.927 47.826 0.00 0.00 37.62 4.35
598 599 5.071923 ACTCCCTCCTTTCCGATTTATAAGG 59.928 44.000 0.00 0.00 38.78 2.69
599 600 6.176014 ACTCCCTCCTTTCCGATTTATAAG 57.824 41.667 0.00 0.00 0.00 1.73
600 601 6.269307 CCTACTCCCTCCTTTCCGATTTATAA 59.731 42.308 0.00 0.00 0.00 0.98
601 602 5.778750 CCTACTCCCTCCTTTCCGATTTATA 59.221 44.000 0.00 0.00 0.00 0.98
602 603 4.593634 CCTACTCCCTCCTTTCCGATTTAT 59.406 45.833 0.00 0.00 0.00 1.40
603 604 3.965347 CCTACTCCCTCCTTTCCGATTTA 59.035 47.826 0.00 0.00 0.00 1.40
604 605 2.772515 CCTACTCCCTCCTTTCCGATTT 59.227 50.000 0.00 0.00 0.00 2.17
605 606 2.292984 ACCTACTCCCTCCTTTCCGATT 60.293 50.000 0.00 0.00 0.00 3.34
606 607 1.291335 ACCTACTCCCTCCTTTCCGAT 59.709 52.381 0.00 0.00 0.00 4.18
607 608 0.708802 ACCTACTCCCTCCTTTCCGA 59.291 55.000 0.00 0.00 0.00 4.55
608 609 1.569653 AACCTACTCCCTCCTTTCCG 58.430 55.000 0.00 0.00 0.00 4.30
609 610 6.819947 TTTATAACCTACTCCCTCCTTTCC 57.180 41.667 0.00 0.00 0.00 3.13
610 611 9.121658 CATTTTTATAACCTACTCCCTCCTTTC 57.878 37.037 0.00 0.00 0.00 2.62
611 612 8.621073 ACATTTTTATAACCTACTCCCTCCTTT 58.379 33.333 0.00 0.00 0.00 3.11
612 613 8.053355 CACATTTTTATAACCTACTCCCTCCTT 58.947 37.037 0.00 0.00 0.00 3.36
613 614 7.574607 CACATTTTTATAACCTACTCCCTCCT 58.425 38.462 0.00 0.00 0.00 3.69
614 615 6.262496 GCACATTTTTATAACCTACTCCCTCC 59.738 42.308 0.00 0.00 0.00 4.30
615 616 6.826741 TGCACATTTTTATAACCTACTCCCTC 59.173 38.462 0.00 0.00 0.00 4.30
616 617 6.727394 TGCACATTTTTATAACCTACTCCCT 58.273 36.000 0.00 0.00 0.00 4.20
617 618 7.399245 TTGCACATTTTTATAACCTACTCCC 57.601 36.000 0.00 0.00 0.00 4.30
618 619 9.869757 AAATTGCACATTTTTATAACCTACTCC 57.130 29.630 0.00 0.00 0.00 3.85
623 624 9.206870 CACAGAAATTGCACATTTTTATAACCT 57.793 29.630 7.84 0.00 0.00 3.50
624 625 8.987890 ACACAGAAATTGCACATTTTTATAACC 58.012 29.630 7.84 0.00 0.00 2.85
1029 1089 0.825840 CCAGATCTCCGTCTCCTCCC 60.826 65.000 0.00 0.00 0.00 4.30
1032 1092 1.456705 GGCCAGATCTCCGTCTCCT 60.457 63.158 0.00 0.00 0.00 3.69
1057 1120 4.735132 CGGCTTCGCTTCCACGGA 62.735 66.667 0.00 0.00 0.00 4.69
1234 1342 2.293399 GTCGTTTCCATGGCAAGAAGTT 59.707 45.455 6.96 0.00 0.00 2.66
2197 2317 6.353323 CCCCTTAACAAAAACCAAACTCATT 58.647 36.000 0.00 0.00 0.00 2.57
2295 2415 5.617528 TGCAACCGGTAGGAAAAGATATA 57.382 39.130 8.00 0.00 41.02 0.86
2300 2420 1.950909 TGTTGCAACCGGTAGGAAAAG 59.049 47.619 26.14 0.00 41.02 2.27
2375 2495 5.413523 GTCAATAAAGGATGTTGTAACCGGT 59.586 40.000 0.00 0.00 0.00 5.28
2401 2521 7.201496 CGACCGTTCTAACTAAAATGCTACAAT 60.201 37.037 0.00 0.00 0.00 2.71
2426 2546 1.058979 GCAACAACAATAAATGCGGCG 59.941 47.619 0.51 0.51 0.00 6.46
2428 2548 3.423384 GCAAGCAACAACAATAAATGCGG 60.423 43.478 0.00 0.00 41.72 5.69
2515 2640 2.100916 AGCCGAGTGACGTTAGCATAAT 59.899 45.455 0.00 0.00 40.78 1.28
2516 2641 1.475280 AGCCGAGTGACGTTAGCATAA 59.525 47.619 0.00 0.00 40.78 1.90
2517 2642 1.100510 AGCCGAGTGACGTTAGCATA 58.899 50.000 0.00 0.00 40.78 3.14
2569 2694 3.386768 AAGAGAGCACAGAAAGCGTTA 57.613 42.857 0.00 0.00 37.01 3.18
2570 2695 2.246719 AAGAGAGCACAGAAAGCGTT 57.753 45.000 0.00 0.00 37.01 4.84
2626 2752 9.524106 CATCTTGTGCATTCAAATGTATAACAT 57.476 29.630 4.76 0.00 41.31 2.71
2669 2795 6.589907 GCCAATAATTAGTGACCCAACAAAAG 59.410 38.462 14.27 0.00 0.00 2.27
2724 2850 2.354704 CGGAGTAGCATTTTCCAGGACA 60.355 50.000 0.00 0.00 0.00 4.02
2831 2957 6.885376 TCTTTACTTTTTCCACACCTTGTGTA 59.115 34.615 5.62 0.00 45.65 2.90
2889 3015 1.376037 CCTTGTCGGCTGGAGTTCC 60.376 63.158 0.00 0.00 0.00 3.62
2902 3028 0.326264 ATCTCGCCTCTTTGCCTTGT 59.674 50.000 0.00 0.00 0.00 3.16
2960 3086 0.320334 TCGTGTTGGTGCGATGATGT 60.320 50.000 0.00 0.00 31.76 3.06
2988 3114 3.285484 GGAGGTACGTTGATCTGGTCTA 58.715 50.000 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.