Multiple sequence alignment - TraesCS2A01G360600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G360600 chr2A 100.000 5701 0 0 1 5701 605039359 605033659 0.000000e+00 10528
1 TraesCS2A01G360600 chr2A 87.962 1919 153 40 2287 4145 605106898 605104998 0.000000e+00 2193
2 TraesCS2A01G360600 chr2A 84.400 891 81 28 4310 5165 605104812 605103945 0.000000e+00 822
3 TraesCS2A01G360600 chr2A 87.500 288 19 9 1113 1383 605112975 605112688 3.320000e-82 316
4 TraesCS2A01G360600 chr2A 96.855 159 5 0 5543 5701 251826898 251826740 3.390000e-67 267
5 TraesCS2A01G360600 chr2A 96.296 162 5 1 5540 5701 193545617 193545777 1.220000e-66 265
6 TraesCS2A01G360600 chr2A 94.118 170 9 1 895 1064 605113236 605113068 2.040000e-64 257
7 TraesCS2A01G360600 chr2A 94.681 94 4 1 5175 5267 605103878 605103785 1.660000e-30 145
8 TraesCS2A01G360600 chr3A 95.038 1713 62 8 1783 3474 727486262 727487972 0.000000e+00 2671
9 TraesCS2A01G360600 chr3A 89.573 585 48 10 3518 4098 727487983 727488558 0.000000e+00 730
10 TraesCS2A01G360600 chr3A 81.644 730 108 10 3519 4245 686242593 686243299 2.960000e-162 582
11 TraesCS2A01G360600 chr3A 80.842 736 102 22 2093 2815 686241164 686241873 5.020000e-150 542
12 TraesCS2A01G360600 chr3A 80.824 704 118 15 3 697 240366717 240367412 2.340000e-148 536
13 TraesCS2A01G360600 chr3A 88.347 369 24 7 4701 5055 727489085 727489448 5.280000e-115 425
14 TraesCS2A01G360600 chr3A 87.202 336 24 12 1110 1427 727485579 727485913 1.170000e-96 364
15 TraesCS2A01G360600 chr3A 83.023 430 43 8 2890 3289 686241978 686242407 4.200000e-96 363
16 TraesCS2A01G360600 chr3A 80.816 490 49 24 908 1362 686239920 686240399 5.470000e-90 342
17 TraesCS2A01G360600 chr3A 90.698 172 3 6 895 1066 727485327 727485485 3.460000e-52 217
18 TraesCS2A01G360600 chr3A 93.443 122 7 1 5335 5455 727489720 727489841 4.540000e-41 180
19 TraesCS2A01G360600 chr3A 93.617 94 5 1 5175 5267 727489619 727489712 7.700000e-29 139
20 TraesCS2A01G360600 chr3B 87.616 1825 152 34 2441 4213 804318810 804320612 0.000000e+00 2050
21 TraesCS2A01G360600 chr3B 89.226 1485 112 24 2799 4245 804379414 804380888 0.000000e+00 1812
22 TraesCS2A01G360600 chr3B 86.923 1170 94 21 1647 2812 804373409 804374523 0.000000e+00 1258
23 TraesCS2A01G360600 chr3B 87.500 992 73 18 4310 5267 804320642 804321616 0.000000e+00 1098
24 TraesCS2A01G360600 chr3B 84.715 1001 98 29 4310 5264 804380874 804381865 0.000000e+00 950
25 TraesCS2A01G360600 chr3B 81.477 745 95 27 2093 2815 728133865 728134588 6.410000e-159 571
26 TraesCS2A01G360600 chr3B 82.753 603 78 11 3574 4173 728135176 728135755 1.100000e-141 514
27 TraesCS2A01G360600 chr3B 84.803 533 45 12 973 1469 375544166 375544698 2.370000e-138 503
28 TraesCS2A01G360600 chr3B 82.983 476 53 20 908 1362 728132814 728133282 6.880000e-109 405
29 TraesCS2A01G360600 chr3B 86.186 333 22 14 1086 1398 804317292 804317620 7.080000e-89 339
30 TraesCS2A01G360600 chr3B 81.075 428 50 11 2890 3287 728134692 728135118 4.290000e-81 313
31 TraesCS2A01G360600 chr3B 95.000 160 7 1 5542 5701 741356249 741356091 3.410000e-62 250
32 TraesCS2A01G360600 chr3B 93.333 150 8 2 5286 5433 804321606 804321755 2.670000e-53 220
33 TraesCS2A01G360600 chr3B 80.702 285 41 9 1603 1877 728133367 728133647 5.790000e-50 209
34 TraesCS2A01G360600 chr3B 77.843 343 36 20 4310 4633 728135786 728136107 5.870000e-40 176
35 TraesCS2A01G360600 chr3B 92.623 122 8 1 5335 5455 804381876 804381997 2.110000e-39 174
36 TraesCS2A01G360600 chr3D 81.157 1141 142 29 2202 3287 548815205 548816327 0.000000e+00 848
37 TraesCS2A01G360600 chr3D 83.295 862 99 28 2441 3281 597618160 597618997 0.000000e+00 752
38 TraesCS2A01G360600 chr3D 82.153 678 85 16 3574 4245 548816385 548817032 3.000000e-152 549
39 TraesCS2A01G360600 chr3D 85.929 533 49 11 3574 4098 597619175 597619689 3.880000e-151 545
40 TraesCS2A01G360600 chr3D 80.287 487 54 25 908 1362 548813934 548814410 4.260000e-86 329
41 TraesCS2A01G360600 chr3D 80.600 433 32 12 995 1398 597616763 597617172 2.600000e-73 287
42 TraesCS2A01G360600 chr3D 93.939 165 10 0 4701 4865 597620215 597620379 3.410000e-62 250
43 TraesCS2A01G360600 chr3D 94.410 161 8 1 5542 5701 582213841 582214001 4.410000e-61 246
44 TraesCS2A01G360600 chr3D 85.864 191 25 2 1647 1836 597617292 597617481 9.690000e-48 202
45 TraesCS2A01G360600 chr3D 83.500 200 29 4 1645 1841 548814528 548814726 3.510000e-42 183
46 TraesCS2A01G360600 chr3D 93.388 121 7 1 5335 5454 597620560 597620680 1.630000e-40 178
47 TraesCS2A01G360600 chr3D 89.873 79 5 3 4852 4929 597620395 597620471 1.310000e-16 99
48 TraesCS2A01G360600 chr7D 80.930 839 122 22 1 811 428949650 428948822 3.750000e-176 628
49 TraesCS2A01G360600 chr7B 82.286 700 107 15 1 690 446659577 446658885 1.770000e-164 590
50 TraesCS2A01G360600 chr4A 80.256 704 122 14 3 697 625089178 625088483 1.100000e-141 514
51 TraesCS2A01G360600 chr4A 93.413 167 9 2 5535 5701 597720742 597720906 4.410000e-61 246
52 TraesCS2A01G360600 chr2B 79.944 708 118 21 3 697 513251784 513251088 3.070000e-137 499
53 TraesCS2A01G360600 chr2B 78.229 689 139 10 3 685 95750290 95749607 1.130000e-116 431
54 TraesCS2A01G360600 chr5D 79.379 708 120 22 3 697 341097 341791 5.170000e-130 475
55 TraesCS2A01G360600 chr6D 78.267 704 132 19 3 692 402875050 402875746 3.160000e-117 433
56 TraesCS2A01G360600 chr6D 98.485 66 1 0 4245 4310 156568425 156568360 3.610000e-22 117
57 TraesCS2A01G360600 chr6B 78.116 690 137 13 3 685 549712575 549711893 5.280000e-115 425
58 TraesCS2A01G360600 chr7A 95.758 165 5 2 5537 5701 647184833 647184671 1.220000e-66 265
59 TraesCS2A01G360600 chr7A 95.625 160 7 0 5542 5701 34967851 34967692 2.040000e-64 257
60 TraesCS2A01G360600 chr7A 94.375 160 9 0 5542 5701 73939227 73939068 4.410000e-61 246
61 TraesCS2A01G360600 chr1A 96.250 160 6 0 5542 5701 51980060 51979901 4.380000e-66 263
62 TraesCS2A01G360600 chr2D 100.000 64 0 0 4245 4308 642039848 642039911 1.000000e-22 119
63 TraesCS2A01G360600 chr2D 98.438 64 0 1 4245 4307 77176501 77176564 1.680000e-20 111
64 TraesCS2A01G360600 chr2D 94.366 71 2 2 4245 4315 101908507 101908439 2.170000e-19 108
65 TraesCS2A01G360600 chr1D 100.000 63 0 0 4245 4307 416134456 416134394 3.610000e-22 117
66 TraesCS2A01G360600 chr1D 87.097 93 6 5 4245 4333 423032830 423032920 3.630000e-17 100
67 TraesCS2A01G360600 chr4D 95.714 70 1 1 4245 4312 8140810 8140741 1.680000e-20 111
68 TraesCS2A01G360600 chr4D 95.714 70 2 1 4245 4313 293368890 293368821 1.680000e-20 111
69 TraesCS2A01G360600 chr4D 93.243 74 4 1 4245 4318 494104695 494104767 2.170000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G360600 chr2A 605033659 605039359 5700 True 10528.000000 10528 100.000000 1 5701 1 chr2A.!!$R2 5700
1 TraesCS2A01G360600 chr2A 605103785 605106898 3113 True 1053.333333 2193 89.014333 2287 5267 3 chr2A.!!$R3 2980
2 TraesCS2A01G360600 chr2A 605112688 605113236 548 True 286.500000 316 90.809000 895 1383 2 chr2A.!!$R4 488
3 TraesCS2A01G360600 chr3A 727485327 727489841 4514 False 675.142857 2671 91.131143 895 5455 7 chr3A.!!$F3 4560
4 TraesCS2A01G360600 chr3A 240366717 240367412 695 False 536.000000 536 80.824000 3 697 1 chr3A.!!$F1 694
5 TraesCS2A01G360600 chr3A 686239920 686243299 3379 False 457.250000 582 81.581250 908 4245 4 chr3A.!!$F2 3337
6 TraesCS2A01G360600 chr3B 804373409 804374523 1114 False 1258.000000 1258 86.923000 1647 2812 1 chr3B.!!$F2 1165
7 TraesCS2A01G360600 chr3B 804379414 804381997 2583 False 978.666667 1812 88.854667 2799 5455 3 chr3B.!!$F5 2656
8 TraesCS2A01G360600 chr3B 804317292 804321755 4463 False 926.750000 2050 88.658750 1086 5433 4 chr3B.!!$F4 4347
9 TraesCS2A01G360600 chr3B 375544166 375544698 532 False 503.000000 503 84.803000 973 1469 1 chr3B.!!$F1 496
10 TraesCS2A01G360600 chr3B 728132814 728136107 3293 False 364.666667 571 81.138833 908 4633 6 chr3B.!!$F3 3725
11 TraesCS2A01G360600 chr3D 548813934 548817032 3098 False 477.250000 848 81.774250 908 4245 4 chr3D.!!$F2 3337
12 TraesCS2A01G360600 chr3D 597616763 597620680 3917 False 330.428571 752 87.555429 995 5454 7 chr3D.!!$F3 4459
13 TraesCS2A01G360600 chr7D 428948822 428949650 828 True 628.000000 628 80.930000 1 811 1 chr7D.!!$R1 810
14 TraesCS2A01G360600 chr7B 446658885 446659577 692 True 590.000000 590 82.286000 1 690 1 chr7B.!!$R1 689
15 TraesCS2A01G360600 chr4A 625088483 625089178 695 True 514.000000 514 80.256000 3 697 1 chr4A.!!$R1 694
16 TraesCS2A01G360600 chr2B 513251088 513251784 696 True 499.000000 499 79.944000 3 697 1 chr2B.!!$R2 694
17 TraesCS2A01G360600 chr2B 95749607 95750290 683 True 431.000000 431 78.229000 3 685 1 chr2B.!!$R1 682
18 TraesCS2A01G360600 chr5D 341097 341791 694 False 475.000000 475 79.379000 3 697 1 chr5D.!!$F1 694
19 TraesCS2A01G360600 chr6D 402875050 402875746 696 False 433.000000 433 78.267000 3 692 1 chr6D.!!$F1 689
20 TraesCS2A01G360600 chr6B 549711893 549712575 682 True 425.000000 425 78.116000 3 685 1 chr6B.!!$R1 682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
755 771 0.032017 AGGCGAGTACTTCAGGGGAT 60.032 55.000 0.00 0.0 0.00 3.85 F
823 839 0.039527 GCGAGCAATGGTTTTTCCGT 60.040 50.000 0.00 0.0 39.52 4.69 F
877 893 0.100682 CCCGGTATGACTCACTGACG 59.899 60.000 0.00 0.0 0.00 4.35 F
1719 2048 0.326238 AGCCGAGGGTCTAATTCCCA 60.326 55.000 3.66 0.0 46.82 4.37 F
1820 2149 0.617413 AGATGGTCCAAGGTCTGCTG 59.383 55.000 0.00 0.0 0.00 4.41 F
3395 4300 1.351017 GGAAGTCCCCTGACACATGAA 59.649 52.381 0.00 0.0 44.33 2.57 F
4107 5050 2.562738 AGGTTGGGCTTTAACATTGAGC 59.437 45.455 0.00 0.0 35.71 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1724 2053 0.387929 TCACCTTGGACACACTCGTC 59.612 55.000 0.00 0.00 35.03 4.20 R
1734 2063 1.822114 TTCCGCGTCATCACCTTGGA 61.822 55.000 4.92 0.00 0.00 3.53 R
2695 3477 3.509575 AGATCTGAAGGAGATACCGATGC 59.490 47.826 0.00 0.00 41.91 3.91 R
3229 4108 1.272490 CTGTAGAGCGTCCAAACAGGA 59.728 52.381 0.00 0.00 46.75 3.86 R
3774 4694 1.320344 ATCTGAGGCTGCCGTACGAA 61.320 55.000 18.76 3.42 0.00 3.85 R
4239 5312 0.034767 ATGCATGCAGCCACTACTGT 60.035 50.000 26.69 1.43 44.83 3.55 R
5457 6798 0.032952 TACAGCTCCCGTGACAACAC 59.967 55.000 0.00 0.00 42.88 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 2.978978 TCCAAGAAGGAACTGACATCCA 59.021 45.455 0.00 0.00 45.65 3.41
56 57 4.969196 CACAGACGCCGCCACTGT 62.969 66.667 10.18 10.18 44.15 3.55
69 70 2.591715 ACTGTCAGCACCGGCAAC 60.592 61.111 0.00 0.00 44.61 4.17
116 117 1.849039 AGGCTGAGCAATCCCATAGTT 59.151 47.619 6.82 0.00 0.00 2.24
126 127 4.517453 GCAATCCCATAGTTGCCGTAATTA 59.483 41.667 0.00 0.00 43.65 1.40
136 137 6.436843 AGTTGCCGTAATTAGAAATGAAGG 57.563 37.500 0.00 0.00 0.00 3.46
179 182 1.305213 CCACCATGTTGGAAGGGGG 60.305 63.158 2.44 0.00 40.96 5.40
184 187 0.178935 CATGTTGGAAGGGGGTTGGT 60.179 55.000 0.00 0.00 0.00 3.67
197 200 1.559065 GGTTGGTAGGGCTGCACCTA 61.559 60.000 11.38 11.38 42.09 3.08
229 232 0.886490 GGCACCACCTCTGAACACAG 60.886 60.000 0.00 0.00 34.51 3.66
236 239 2.234661 CACCTCTGAACACAGGAGCATA 59.765 50.000 3.31 0.00 33.52 3.14
237 240 2.906389 ACCTCTGAACACAGGAGCATAA 59.094 45.455 3.31 0.00 33.52 1.90
255 258 5.356470 AGCATAAGATCTGGCAAAAAGAGAC 59.644 40.000 14.45 0.00 0.00 3.36
272 276 3.452627 AGAGACGGCTTTAGATGTCCAAT 59.547 43.478 0.00 0.00 31.75 3.16
277 281 6.267928 AGACGGCTTTAGATGTCCAATATAGT 59.732 38.462 0.00 0.00 31.75 2.12
301 306 2.038557 AGGTAGTGAAGCAAACCACGAT 59.961 45.455 0.00 0.00 38.26 3.73
305 312 0.893270 TGAAGCAAACCACGATGGGG 60.893 55.000 8.57 0.00 43.37 4.96
348 355 0.179124 CGACAAGCTAGGACTGGAGC 60.179 60.000 0.00 0.00 39.08 4.70
351 358 1.912043 ACAAGCTAGGACTGGAGCAAT 59.088 47.619 0.00 0.00 41.36 3.56
408 415 3.263259 AGGGAGCCAGGCAAGCTT 61.263 61.111 15.80 0.00 41.75 3.74
415 423 1.980772 CCAGGCAAGCTTGAAGGGG 60.981 63.158 30.39 19.29 0.00 4.79
420 428 1.032114 GCAAGCTTGAAGGGGCGTAT 61.032 55.000 30.39 0.00 0.00 3.06
457 469 3.532155 GAGCCGCCGACAGAGGAT 61.532 66.667 0.00 0.00 0.00 3.24
527 539 2.094700 TCAGAGTAGCGCCAACAAGTAG 60.095 50.000 2.29 0.00 0.00 2.57
589 603 4.478371 CTGCCTCCGCATGAGCCA 62.478 66.667 0.00 0.00 46.11 4.75
594 608 2.202919 TCCGCATGAGCCATCACG 60.203 61.111 0.00 0.00 38.57 4.35
595 609 2.202919 CCGCATGAGCCATCACGA 60.203 61.111 0.00 0.00 38.57 4.35
630 646 4.918201 GGGCCGCCGAAGATGAGG 62.918 72.222 2.55 0.00 0.00 3.86
632 648 3.849951 GCCGCCGAAGATGAGGGA 61.850 66.667 0.00 0.00 0.00 4.20
635 651 2.110006 GCCGAAGATGAGGGAGGC 59.890 66.667 0.00 0.00 37.61 4.70
637 653 2.419198 CGAAGATGAGGGAGGCCG 59.581 66.667 0.00 0.00 0.00 6.13
638 654 2.110006 GAAGATGAGGGAGGCCGC 59.890 66.667 0.00 0.00 0.00 6.53
639 655 2.366167 AAGATGAGGGAGGCCGCT 60.366 61.111 6.40 0.00 38.38 5.52
640 656 1.977293 GAAGATGAGGGAGGCCGCTT 61.977 60.000 6.40 0.00 35.55 4.68
641 657 2.203126 GATGAGGGAGGCCGCTTG 60.203 66.667 6.40 0.00 35.55 4.01
642 658 4.496336 ATGAGGGAGGCCGCTTGC 62.496 66.667 6.40 0.00 35.55 4.01
652 668 4.741781 CCGCTTGCGCACGAAAGG 62.742 66.667 19.16 12.96 35.30 3.11
654 670 4.326766 GCTTGCGCACGAAAGGCA 62.327 61.111 19.16 0.00 35.78 4.75
655 671 2.127118 CTTGCGCACGAAAGGCAG 60.127 61.111 11.12 0.00 38.04 4.85
656 672 4.326766 TTGCGCACGAAAGGCAGC 62.327 61.111 11.12 0.00 38.04 5.25
664 680 4.103103 GAAAGGCAGCCCGCGAAC 62.103 66.667 8.23 0.00 43.84 3.95
665 681 4.947147 AAAGGCAGCCCGCGAACA 62.947 61.111 8.23 0.00 43.84 3.18
674 690 4.402528 CCGCGAACACCCCCATGA 62.403 66.667 8.23 0.00 0.00 3.07
675 691 2.124736 CGCGAACACCCCCATGAT 60.125 61.111 0.00 0.00 0.00 2.45
676 692 2.180204 CGCGAACACCCCCATGATC 61.180 63.158 0.00 0.00 0.00 2.92
677 693 2.180204 GCGAACACCCCCATGATCG 61.180 63.158 0.00 1.59 44.87 3.69
678 694 1.523711 CGAACACCCCCATGATCGG 60.524 63.158 0.00 0.00 40.16 4.18
679 695 1.823899 GAACACCCCCATGATCGGC 60.824 63.158 0.00 0.00 0.00 5.54
680 696 3.358932 AACACCCCCATGATCGGCC 62.359 63.158 0.00 0.00 0.00 6.13
681 697 4.935495 CACCCCCATGATCGGCCG 62.935 72.222 22.12 22.12 0.00 6.13
685 701 4.240103 CCCATGATCGGCCGCAGA 62.240 66.667 23.51 3.06 0.00 4.26
686 702 2.031616 CCATGATCGGCCGCAGAT 59.968 61.111 23.51 9.35 0.00 2.90
687 703 2.031516 CCATGATCGGCCGCAGATC 61.032 63.158 23.51 22.27 43.45 2.75
688 704 2.031516 CATGATCGGCCGCAGATCC 61.032 63.158 23.51 11.70 42.73 3.36
689 705 3.245668 ATGATCGGCCGCAGATCCC 62.246 63.158 23.51 7.87 42.73 3.85
690 706 3.928779 GATCGGCCGCAGATCCCA 61.929 66.667 23.51 0.00 38.75 4.37
691 707 4.241555 ATCGGCCGCAGATCCCAC 62.242 66.667 23.51 0.00 0.00 4.61
709 725 3.730761 GCCCAGCGACAACAGCAG 61.731 66.667 0.00 0.00 37.01 4.24
710 726 3.052082 CCCAGCGACAACAGCAGG 61.052 66.667 0.00 0.00 40.42 4.85
711 727 3.052082 CCAGCGACAACAGCAGGG 61.052 66.667 0.00 0.00 37.58 4.45
712 728 2.281070 CAGCGACAACAGCAGGGT 60.281 61.111 0.00 0.00 37.01 4.34
713 729 1.893808 CAGCGACAACAGCAGGGTT 60.894 57.895 0.00 0.00 37.01 4.11
718 734 3.305516 CAACAGCAGGGTTGGGCC 61.306 66.667 0.00 0.00 43.39 5.80
719 735 4.974721 AACAGCAGGGTTGGGCCG 62.975 66.667 0.00 0.00 38.44 6.13
738 754 3.155167 GCCACGTAGGGGAGGAGG 61.155 72.222 6.23 0.00 38.09 4.30
739 755 3.155167 CCACGTAGGGGAGGAGGC 61.155 72.222 0.00 0.00 0.00 4.70
740 756 3.528370 CACGTAGGGGAGGAGGCG 61.528 72.222 0.00 0.00 0.00 5.52
741 757 3.736224 ACGTAGGGGAGGAGGCGA 61.736 66.667 0.00 0.00 0.00 5.54
742 758 2.907917 CGTAGGGGAGGAGGCGAG 60.908 72.222 0.00 0.00 0.00 5.03
743 759 2.279408 GTAGGGGAGGAGGCGAGT 59.721 66.667 0.00 0.00 0.00 4.18
744 760 1.535685 GTAGGGGAGGAGGCGAGTA 59.464 63.158 0.00 0.00 0.00 2.59
745 761 0.822944 GTAGGGGAGGAGGCGAGTAC 60.823 65.000 0.00 0.00 0.00 2.73
746 762 0.992431 TAGGGGAGGAGGCGAGTACT 60.992 60.000 0.00 0.00 0.00 2.73
747 763 1.381463 GGGGAGGAGGCGAGTACTT 60.381 63.158 0.00 0.00 0.00 2.24
748 764 1.393487 GGGGAGGAGGCGAGTACTTC 61.393 65.000 0.00 0.00 0.00 3.01
749 765 0.683504 GGGAGGAGGCGAGTACTTCA 60.684 60.000 0.00 0.00 0.00 3.02
750 766 0.741915 GGAGGAGGCGAGTACTTCAG 59.258 60.000 0.00 0.00 0.00 3.02
751 767 0.741915 GAGGAGGCGAGTACTTCAGG 59.258 60.000 0.00 0.00 0.00 3.86
752 768 0.684805 AGGAGGCGAGTACTTCAGGG 60.685 60.000 0.00 0.00 0.00 4.45
753 769 1.677637 GGAGGCGAGTACTTCAGGGG 61.678 65.000 0.00 0.00 0.00 4.79
754 770 0.683504 GAGGCGAGTACTTCAGGGGA 60.684 60.000 0.00 0.00 0.00 4.81
755 771 0.032017 AGGCGAGTACTTCAGGGGAT 60.032 55.000 0.00 0.00 0.00 3.85
756 772 0.389757 GGCGAGTACTTCAGGGGATC 59.610 60.000 0.00 0.00 0.00 3.36
757 773 1.112113 GCGAGTACTTCAGGGGATCA 58.888 55.000 0.00 0.00 0.00 2.92
758 774 1.067821 GCGAGTACTTCAGGGGATCAG 59.932 57.143 0.00 0.00 0.00 2.90
759 775 1.683917 CGAGTACTTCAGGGGATCAGG 59.316 57.143 0.00 0.00 0.00 3.86
760 776 2.043227 GAGTACTTCAGGGGATCAGGG 58.957 57.143 0.00 0.00 0.00 4.45
761 777 0.470341 GTACTTCAGGGGATCAGGGC 59.530 60.000 0.00 0.00 0.00 5.19
762 778 1.048724 TACTTCAGGGGATCAGGGCG 61.049 60.000 0.00 0.00 0.00 6.13
763 779 3.764160 CTTCAGGGGATCAGGGCGC 62.764 68.421 0.00 0.00 0.00 6.53
808 824 4.504916 CGGACCTGCAGGAGCGAG 62.505 72.222 39.19 20.94 46.23 5.03
809 825 4.828925 GGACCTGCAGGAGCGAGC 62.829 72.222 39.19 18.45 46.23 5.03
810 826 4.074526 GACCTGCAGGAGCGAGCA 62.075 66.667 39.19 0.00 46.23 4.26
811 827 3.596066 GACCTGCAGGAGCGAGCAA 62.596 63.158 39.19 0.00 46.23 3.91
812 828 2.124819 CCTGCAGGAGCGAGCAAT 60.125 61.111 29.88 0.00 46.23 3.56
813 829 2.470362 CCTGCAGGAGCGAGCAATG 61.470 63.158 29.88 0.00 46.23 2.82
814 830 2.437180 TGCAGGAGCGAGCAATGG 60.437 61.111 0.00 0.00 46.23 3.16
815 831 2.437359 GCAGGAGCGAGCAATGGT 60.437 61.111 0.00 0.00 0.00 3.55
816 832 2.042831 GCAGGAGCGAGCAATGGTT 61.043 57.895 0.00 0.00 0.00 3.67
817 833 1.589716 GCAGGAGCGAGCAATGGTTT 61.590 55.000 0.00 0.00 0.00 3.27
818 834 0.883833 CAGGAGCGAGCAATGGTTTT 59.116 50.000 0.00 0.00 0.00 2.43
819 835 1.270550 CAGGAGCGAGCAATGGTTTTT 59.729 47.619 0.00 0.00 0.00 1.94
820 836 1.541588 AGGAGCGAGCAATGGTTTTTC 59.458 47.619 0.00 0.00 0.00 2.29
821 837 1.402852 GGAGCGAGCAATGGTTTTTCC 60.403 52.381 0.00 0.00 0.00 3.13
822 838 0.240945 AGCGAGCAATGGTTTTTCCG 59.759 50.000 0.00 0.00 39.52 4.30
823 839 0.039527 GCGAGCAATGGTTTTTCCGT 60.040 50.000 0.00 0.00 39.52 4.69
824 840 1.601914 GCGAGCAATGGTTTTTCCGTT 60.602 47.619 0.00 0.00 45.41 4.44
830 846 2.812358 ATGGTTTTTCCGTTGCCTTC 57.188 45.000 0.00 0.00 39.52 3.46
831 847 1.475403 TGGTTTTTCCGTTGCCTTCA 58.525 45.000 0.00 0.00 39.52 3.02
832 848 1.825474 TGGTTTTTCCGTTGCCTTCAA 59.175 42.857 0.00 0.00 39.52 2.69
833 849 2.198406 GGTTTTTCCGTTGCCTTCAAC 58.802 47.619 0.00 0.00 46.85 3.18
839 855 3.115556 GTTGCCTTCAACGCCACA 58.884 55.556 0.00 0.00 42.55 4.17
840 856 1.008538 GTTGCCTTCAACGCCACAG 60.009 57.895 0.00 0.00 42.55 3.66
841 857 2.192861 TTGCCTTCAACGCCACAGG 61.193 57.895 0.00 0.00 0.00 4.00
842 858 2.594592 GCCTTCAACGCCACAGGT 60.595 61.111 0.00 0.00 0.00 4.00
843 859 2.617274 GCCTTCAACGCCACAGGTC 61.617 63.158 0.00 0.00 0.00 3.85
844 860 1.966451 CCTTCAACGCCACAGGTCC 60.966 63.158 0.00 0.00 0.00 4.46
845 861 1.071471 CTTCAACGCCACAGGTCCT 59.929 57.895 0.00 0.00 0.00 3.85
846 862 0.535102 CTTCAACGCCACAGGTCCTT 60.535 55.000 0.00 0.00 0.00 3.36
847 863 0.534203 TTCAACGCCACAGGTCCTTC 60.534 55.000 0.00 0.00 0.00 3.46
848 864 1.227823 CAACGCCACAGGTCCTTCA 60.228 57.895 0.00 0.00 0.00 3.02
849 865 0.817634 CAACGCCACAGGTCCTTCAA 60.818 55.000 0.00 0.00 0.00 2.69
850 866 0.110486 AACGCCACAGGTCCTTCAAT 59.890 50.000 0.00 0.00 0.00 2.57
851 867 0.606401 ACGCCACAGGTCCTTCAATG 60.606 55.000 0.00 0.00 0.00 2.82
852 868 1.885871 GCCACAGGTCCTTCAATGC 59.114 57.895 0.00 0.00 0.00 3.56
853 869 1.598701 GCCACAGGTCCTTCAATGCC 61.599 60.000 0.00 0.00 0.00 4.40
854 870 0.967380 CCACAGGTCCTTCAATGCCC 60.967 60.000 0.00 0.00 0.00 5.36
855 871 1.002134 ACAGGTCCTTCAATGCCCG 60.002 57.895 0.00 0.00 0.00 6.13
856 872 2.044946 AGGTCCTTCAATGCCCGC 60.045 61.111 0.00 0.00 0.00 6.13
857 873 3.140814 GGTCCTTCAATGCCCGCC 61.141 66.667 0.00 0.00 0.00 6.13
858 874 3.140814 GTCCTTCAATGCCCGCCC 61.141 66.667 0.00 0.00 0.00 6.13
859 875 4.440829 TCCTTCAATGCCCGCCCC 62.441 66.667 0.00 0.00 0.00 5.80
871 887 3.151710 CGCCCCCGGTATGACTCA 61.152 66.667 0.00 0.00 0.00 3.41
872 888 2.504519 GCCCCCGGTATGACTCAC 59.495 66.667 0.00 0.00 0.00 3.51
873 889 2.064581 GCCCCCGGTATGACTCACT 61.065 63.158 0.00 0.00 0.00 3.41
874 890 1.823295 CCCCCGGTATGACTCACTG 59.177 63.158 0.00 0.00 0.00 3.66
875 891 0.686441 CCCCCGGTATGACTCACTGA 60.686 60.000 0.00 0.00 0.00 3.41
876 892 0.460311 CCCCGGTATGACTCACTGAC 59.540 60.000 0.00 0.00 0.00 3.51
877 893 0.100682 CCCGGTATGACTCACTGACG 59.899 60.000 0.00 0.00 0.00 4.35
878 894 0.809385 CCGGTATGACTCACTGACGT 59.191 55.000 0.00 0.00 0.00 4.34
879 895 1.467543 CCGGTATGACTCACTGACGTG 60.468 57.143 0.00 0.00 42.59 4.49
880 896 1.630148 GGTATGACTCACTGACGTGC 58.370 55.000 0.00 0.00 40.99 5.34
881 897 1.202582 GGTATGACTCACTGACGTGCT 59.797 52.381 0.00 0.00 40.99 4.40
882 898 2.254459 GTATGACTCACTGACGTGCTG 58.746 52.381 0.00 0.00 40.99 4.41
883 899 0.668706 ATGACTCACTGACGTGCTGC 60.669 55.000 0.00 0.00 40.99 5.25
884 900 1.006805 GACTCACTGACGTGCTGCT 60.007 57.895 0.00 0.00 40.99 4.24
885 901 1.006314 GACTCACTGACGTGCTGCTC 61.006 60.000 0.00 0.00 40.99 4.26
886 902 2.050077 TCACTGACGTGCTGCTCG 60.050 61.111 20.88 20.88 40.99 5.03
887 903 3.771491 CACTGACGTGCTGCTCGC 61.771 66.667 22.17 15.46 33.82 5.03
907 923 1.856597 CGACGACTCTGTTTTTCCGTT 59.143 47.619 0.00 0.00 0.00 4.44
970 986 1.231958 TTCAAACCACACCCGCGATC 61.232 55.000 8.23 0.00 0.00 3.69
971 987 2.740826 AAACCACACCCGCGATCG 60.741 61.111 11.69 11.69 0.00 3.69
1150 1281 1.654105 CGATCGTCTTTTCGTTCCCTG 59.346 52.381 7.03 0.00 0.00 4.45
1176 1313 6.093219 CCGCTTGATTCTGAGGATTTATATGG 59.907 42.308 0.00 0.00 0.00 2.74
1177 1321 6.402983 CGCTTGATTCTGAGGATTTATATGGC 60.403 42.308 0.00 0.00 0.00 4.40
1180 1324 5.942236 TGATTCTGAGGATTTATATGGCTGC 59.058 40.000 0.00 0.00 0.00 5.25
1183 1327 4.223700 TCTGAGGATTTATATGGCTGCGAT 59.776 41.667 2.02 2.02 0.00 4.58
1186 1330 4.910195 AGGATTTATATGGCTGCGATTGA 58.090 39.130 1.63 0.00 0.00 2.57
1509 1828 6.544928 ACAACAAACTGAAAAGGAGGATTT 57.455 33.333 0.00 0.00 0.00 2.17
1511 1830 6.070824 ACAACAAACTGAAAAGGAGGATTTGT 60.071 34.615 0.00 0.00 39.72 2.83
1514 1833 6.818142 ACAAACTGAAAAGGAGGATTTGTTTG 59.182 34.615 0.00 0.00 43.86 2.93
1517 1836 7.181569 ACTGAAAAGGAGGATTTGTTTGAAA 57.818 32.000 0.00 0.00 0.00 2.69
1635 1962 6.094048 CAGGTTTTGTATGGAATCAGTAGTGG 59.906 42.308 0.00 0.00 0.00 4.00
1655 1983 5.043248 GTGGTTGAGACAAAGTTTTCATGG 58.957 41.667 0.00 0.00 0.00 3.66
1658 1986 3.230134 TGAGACAAAGTTTTCATGGGGG 58.770 45.455 0.00 0.00 0.00 5.40
1664 1992 3.701205 AAGTTTTCATGGGGGATTTGC 57.299 42.857 0.00 0.00 0.00 3.68
1712 2041 1.542767 CGAGTGATAGCCGAGGGTCTA 60.543 57.143 0.00 0.00 0.00 2.59
1714 2043 3.158676 GAGTGATAGCCGAGGGTCTAAT 58.841 50.000 0.00 0.00 0.00 1.73
1715 2044 3.574826 GAGTGATAGCCGAGGGTCTAATT 59.425 47.826 0.00 0.00 0.00 1.40
1719 2048 0.326238 AGCCGAGGGTCTAATTCCCA 60.326 55.000 3.66 0.00 46.82 4.37
1724 2053 2.629051 GAGGGTCTAATTCCCAACACG 58.371 52.381 3.66 0.00 46.82 4.49
1820 2149 0.617413 AGATGGTCCAAGGTCTGCTG 59.383 55.000 0.00 0.00 0.00 4.41
1889 2561 3.681897 CGCCTTCAGTCATAATCATAGCC 59.318 47.826 0.00 0.00 0.00 3.93
2628 3396 3.366374 GCAGGTCAAATTTCTACTGCCAC 60.366 47.826 19.32 1.75 43.94 5.01
2649 3417 6.183359 GCCACAAAAATGTATGACGTGATTTC 60.183 38.462 0.00 0.00 0.00 2.17
2677 3459 5.295045 TGTTACGACTGAATACTGCTATCGA 59.705 40.000 0.00 0.00 32.63 3.59
2695 3477 7.438160 TGCTATCGATTATCCTTTGTAGTGTTG 59.562 37.037 1.71 0.00 0.00 3.33
2829 3612 4.217754 TGTTCTTAGCAAAATTCGCGTT 57.782 36.364 5.77 0.00 0.00 4.84
2838 3622 5.723237 AGCAAAATTCGCGTTGTTTTAAAG 58.277 33.333 5.77 2.62 0.00 1.85
3167 4039 7.840342 AGCAAGTACTGAATTCTAACATCAG 57.160 36.000 7.05 0.00 44.77 2.90
3173 4045 9.420118 AGTACTGAATTCTAACATCAGAGAGAT 57.580 33.333 7.05 0.00 42.48 2.75
3187 4066 7.966246 ATCAGAGAGATGTTCATTTCTATGC 57.034 36.000 17.33 3.91 35.06 3.14
3199 4078 8.777413 TGTTCATTTCTATGCACATATCTAAGC 58.223 33.333 0.00 0.00 33.82 3.09
3229 4108 6.441924 TCTTTGAATAGGAGGACAGATTGTCT 59.558 38.462 8.89 0.00 46.19 3.41
3341 4245 8.746052 TCCTCATGTTAAAGAAAAAGAACAGA 57.254 30.769 0.00 0.00 35.41 3.41
3352 4256 5.825151 AGAAAAAGAACAGAACTCTCTTGGG 59.175 40.000 0.00 0.00 29.93 4.12
3395 4300 1.351017 GGAAGTCCCCTGACACATGAA 59.649 52.381 0.00 0.00 44.33 2.57
3413 4318 9.275398 ACACATGAATTCTATTTTTGTTGCATT 57.725 25.926 7.05 0.00 0.00 3.56
3430 4335 7.432059 TGTTGCATTAAAATGATTCAGTCACA 58.568 30.769 6.87 0.00 40.28 3.58
3431 4336 7.924947 TGTTGCATTAAAATGATTCAGTCACAA 59.075 29.630 6.87 0.00 40.28 3.33
3774 4694 8.487313 TTTGTTATATAGTGCAGTGACGAATT 57.513 30.769 3.69 0.00 0.00 2.17
3984 4927 8.486210 TGTCTGCCTTAATATCTGATAACACTT 58.514 33.333 0.81 0.00 0.00 3.16
4098 5041 3.253220 TCTGGTAAGAGGTTGGGCTTTA 58.747 45.455 0.00 0.00 0.00 1.85
4099 5042 3.653836 TCTGGTAAGAGGTTGGGCTTTAA 59.346 43.478 0.00 0.00 0.00 1.52
4100 5043 3.756963 CTGGTAAGAGGTTGGGCTTTAAC 59.243 47.826 0.00 0.00 0.00 2.01
4101 5044 3.138653 TGGTAAGAGGTTGGGCTTTAACA 59.861 43.478 0.00 0.00 0.00 2.41
4102 5045 4.202631 TGGTAAGAGGTTGGGCTTTAACAT 60.203 41.667 0.00 0.00 0.00 2.71
4103 5046 4.770531 GGTAAGAGGTTGGGCTTTAACATT 59.229 41.667 0.00 0.00 0.00 2.71
4104 5047 4.871933 AAGAGGTTGGGCTTTAACATTG 57.128 40.909 0.00 0.00 0.00 2.82
4105 5048 4.112634 AGAGGTTGGGCTTTAACATTGA 57.887 40.909 0.00 0.00 0.00 2.57
4106 5049 4.082125 AGAGGTTGGGCTTTAACATTGAG 58.918 43.478 0.00 0.00 0.00 3.02
4107 5050 2.562738 AGGTTGGGCTTTAACATTGAGC 59.437 45.455 0.00 0.00 35.71 4.26
4108 5051 2.562738 GGTTGGGCTTTAACATTGAGCT 59.437 45.455 0.00 0.00 36.66 4.09
4109 5052 3.006859 GGTTGGGCTTTAACATTGAGCTT 59.993 43.478 0.00 0.00 36.66 3.74
4110 5053 4.503123 GGTTGGGCTTTAACATTGAGCTTT 60.503 41.667 0.00 0.00 36.66 3.51
4237 5310 8.854979 TTCACATCTCACTTACAATTGTTTTG 57.145 30.769 17.78 11.36 0.00 2.44
4238 5311 8.219546 TCACATCTCACTTACAATTGTTTTGA 57.780 30.769 17.78 14.77 0.00 2.69
4239 5312 8.681806 TCACATCTCACTTACAATTGTTTTGAA 58.318 29.630 17.78 3.80 0.00 2.69
4240 5313 8.745837 CACATCTCACTTACAATTGTTTTGAAC 58.254 33.333 17.78 0.00 0.00 3.18
4241 5314 8.465999 ACATCTCACTTACAATTGTTTTGAACA 58.534 29.630 17.78 6.90 40.21 3.18
4242 5315 8.961092 CATCTCACTTACAATTGTTTTGAACAG 58.039 33.333 17.78 5.06 43.27 3.16
4243 5316 8.050778 TCTCACTTACAATTGTTTTGAACAGT 57.949 30.769 17.78 5.22 43.27 3.55
4244 5317 9.168451 TCTCACTTACAATTGTTTTGAACAGTA 57.832 29.630 17.78 0.00 43.27 2.74
4245 5318 9.438291 CTCACTTACAATTGTTTTGAACAGTAG 57.562 33.333 17.78 1.24 43.27 2.57
4246 5319 8.952278 TCACTTACAATTGTTTTGAACAGTAGT 58.048 29.630 17.78 0.00 43.27 2.73
4247 5320 9.009327 CACTTACAATTGTTTTGAACAGTAGTG 57.991 33.333 17.78 5.13 43.27 2.74
4248 5321 8.188139 ACTTACAATTGTTTTGAACAGTAGTGG 58.812 33.333 17.78 0.00 43.27 4.00
4249 5322 5.348164 ACAATTGTTTTGAACAGTAGTGGC 58.652 37.500 4.92 0.00 43.27 5.01
4250 5323 5.127031 ACAATTGTTTTGAACAGTAGTGGCT 59.873 36.000 4.92 0.00 43.27 4.75
4251 5324 4.630894 TTGTTTTGAACAGTAGTGGCTG 57.369 40.909 1.92 0.00 43.27 4.85
4252 5325 2.357637 TGTTTTGAACAGTAGTGGCTGC 59.642 45.455 1.92 0.00 39.96 5.25
4253 5326 2.340210 TTTGAACAGTAGTGGCTGCA 57.660 45.000 0.50 0.00 39.96 4.41
4254 5327 2.566833 TTGAACAGTAGTGGCTGCAT 57.433 45.000 0.50 0.00 39.96 3.96
4255 5328 1.812235 TGAACAGTAGTGGCTGCATG 58.188 50.000 0.50 0.00 39.96 4.06
4256 5329 0.449388 GAACAGTAGTGGCTGCATGC 59.551 55.000 11.82 11.82 39.96 4.06
4257 5330 0.250858 AACAGTAGTGGCTGCATGCA 60.251 50.000 21.29 21.29 45.15 3.96
4258 5331 0.034767 ACAGTAGTGGCTGCATGCAT 60.035 50.000 22.97 8.57 45.15 3.96
4259 5332 0.661552 CAGTAGTGGCTGCATGCATC 59.338 55.000 22.97 17.75 45.15 3.91
4260 5333 0.812811 AGTAGTGGCTGCATGCATCG 60.813 55.000 22.97 12.00 45.15 3.84
4261 5334 1.091771 GTAGTGGCTGCATGCATCGT 61.092 55.000 22.97 7.82 45.15 3.73
4262 5335 0.811219 TAGTGGCTGCATGCATCGTC 60.811 55.000 22.97 13.00 45.15 4.20
4263 5336 2.825387 TGGCTGCATGCATCGTCC 60.825 61.111 22.97 19.03 45.15 4.79
4264 5337 2.825387 GGCTGCATGCATCGTCCA 60.825 61.111 22.97 0.00 45.15 4.02
4265 5338 2.713770 GCTGCATGCATCGTCCAG 59.286 61.111 22.97 8.76 42.31 3.86
4266 5339 1.816679 GCTGCATGCATCGTCCAGA 60.817 57.895 22.97 0.00 42.31 3.86
4267 5340 1.164662 GCTGCATGCATCGTCCAGAT 61.165 55.000 22.97 0.00 42.31 2.90
4275 5348 1.445095 ATCGTCCAGATGCAGAGGC 59.555 57.895 0.00 0.00 38.36 4.70
4276 5349 2.037620 ATCGTCCAGATGCAGAGGCC 62.038 60.000 0.00 0.00 38.36 5.19
4277 5350 2.202987 GTCCAGATGCAGAGGCCG 60.203 66.667 0.00 0.00 40.13 6.13
4278 5351 3.473647 TCCAGATGCAGAGGCCGG 61.474 66.667 0.00 0.00 40.13 6.13
4279 5352 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
4280 5353 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
4296 5369 3.029083 GGGGTCCTCCTCCATTTCT 57.971 57.895 0.00 0.00 35.33 2.52
4297 5370 2.191981 GGGGTCCTCCTCCATTTCTA 57.808 55.000 0.00 0.00 35.33 2.10
4298 5371 2.488836 GGGGTCCTCCTCCATTTCTAA 58.511 52.381 0.00 0.00 35.33 2.10
4299 5372 2.850568 GGGGTCCTCCTCCATTTCTAAA 59.149 50.000 0.00 0.00 35.33 1.85
4300 5373 3.268595 GGGGTCCTCCTCCATTTCTAAAA 59.731 47.826 0.00 0.00 35.33 1.52
4301 5374 4.264217 GGGGTCCTCCTCCATTTCTAAAAA 60.264 45.833 0.00 0.00 35.33 1.94
4453 5527 4.890158 TCTAGGTCAGCAACTTGATTGA 57.110 40.909 0.00 0.00 41.23 2.57
4613 5711 3.442273 TCGTTTTGCTGTTTCAGGTTCTT 59.558 39.130 0.00 0.00 31.21 2.52
4629 5727 0.108186 TCTTAGGCTGCACATGGACG 60.108 55.000 0.50 0.00 0.00 4.79
4630 5728 0.108186 CTTAGGCTGCACATGGACGA 60.108 55.000 0.50 0.00 0.00 4.20
4631 5729 0.391130 TTAGGCTGCACATGGACGAC 60.391 55.000 0.50 0.00 0.00 4.34
4632 5730 2.557059 TAGGCTGCACATGGACGACG 62.557 60.000 0.50 0.00 0.00 5.12
4633 5731 4.152625 GCTGCACATGGACGACGC 62.153 66.667 0.00 0.00 0.00 5.19
4634 5732 2.433145 CTGCACATGGACGACGCT 60.433 61.111 0.00 0.00 0.00 5.07
4639 5738 3.190849 CATGGACGACGCTGCAGG 61.191 66.667 17.12 8.27 0.00 4.85
4660 5759 4.662961 CGGCGCAGAGTCCACACA 62.663 66.667 10.83 0.00 0.00 3.72
4663 5762 1.079543 GCGCAGAGTCCACACAGAT 60.080 57.895 0.30 0.00 0.00 2.90
4686 5785 4.874396 TGTCGTCTGTAGATACTTCGATGT 59.126 41.667 9.12 9.12 0.00 3.06
4688 5787 4.208666 TCGTCTGTAGATACTTCGATGTCG 59.791 45.833 7.29 2.55 41.45 4.35
4699 5839 2.256117 TCGATGTCGAGGAGATGCTA 57.744 50.000 0.21 0.00 44.22 3.49
4775 5940 6.345298 TCTCGGCAATGACTTCAATATACAA 58.655 36.000 0.00 0.00 0.00 2.41
4809 5981 7.128331 CACAAAGAGAATACTTCAACACTGTG 58.872 38.462 6.19 6.19 0.00 3.66
4821 5993 8.123639 ACTTCAACACTGTGTAGATGTACTAT 57.876 34.615 14.69 0.00 33.39 2.12
4831 6003 5.302059 GTGTAGATGTACTATGCAGGAGGAA 59.698 44.000 1.30 0.00 33.39 3.36
4850 6051 1.453155 AGATCACACAAATCACGGCC 58.547 50.000 0.00 0.00 0.00 6.13
4883 6084 1.279496 TGCCAAGCCTCTACACTGAT 58.721 50.000 0.00 0.00 0.00 2.90
4912 6113 2.095110 TCCAGCGTTTGCATTCATTCTG 60.095 45.455 0.00 0.00 46.23 3.02
4937 6141 8.642432 TGAAATGTCTTCAGAGAGAGTTTCTTA 58.358 33.333 11.01 0.00 34.19 2.10
4960 6179 3.583228 TCTTCTTCTGACAACAGGGGTA 58.417 45.455 0.00 0.00 43.60 3.69
5099 6319 6.687604 AGAACAATTGTTAGTTGTTATGGCC 58.312 36.000 23.33 6.74 46.51 5.36
5211 6519 7.861630 TCTAATAGCAAAGTGACTGTTTGTTC 58.138 34.615 0.00 0.00 37.25 3.18
5252 6560 6.154534 AGGCTGATACATGTACACAAACTAGA 59.845 38.462 7.96 0.00 0.00 2.43
5253 6561 6.816640 GGCTGATACATGTACACAAACTAGAA 59.183 38.462 7.96 0.00 0.00 2.10
5254 6562 7.333423 GGCTGATACATGTACACAAACTAGAAA 59.667 37.037 7.96 0.00 0.00 2.52
5255 6563 8.717821 GCTGATACATGTACACAAACTAGAAAA 58.282 33.333 7.96 0.00 0.00 2.29
5261 6569 8.730680 ACATGTACACAAACTAGAAAATCATCC 58.269 33.333 0.00 0.00 0.00 3.51
5262 6570 8.950210 CATGTACACAAACTAGAAAATCATCCT 58.050 33.333 0.00 0.00 0.00 3.24
5264 6572 9.653287 TGTACACAAACTAGAAAATCATCCTAG 57.347 33.333 0.00 0.00 36.76 3.02
5265 6573 9.654663 GTACACAAACTAGAAAATCATCCTAGT 57.345 33.333 0.00 0.00 43.34 2.57
5267 6575 9.003658 ACACAAACTAGAAAATCATCCTAGTTG 57.996 33.333 12.86 10.18 46.81 3.16
5268 6576 9.219603 CACAAACTAGAAAATCATCCTAGTTGA 57.780 33.333 12.86 0.00 46.81 3.18
5269 6577 9.793259 ACAAACTAGAAAATCATCCTAGTTGAA 57.207 29.630 12.86 0.00 46.81 2.69
5311 6619 8.822805 TCATCCTAGTTTTGGTATATATCACCC 58.177 37.037 0.00 0.00 34.99 4.61
5312 6620 8.602424 CATCCTAGTTTTGGTATATATCACCCA 58.398 37.037 0.00 0.00 34.99 4.51
5313 6621 8.570038 TCCTAGTTTTGGTATATATCACCCAA 57.430 34.615 0.00 7.13 34.99 4.12
5314 6622 9.005318 TCCTAGTTTTGGTATATATCACCCAAA 57.995 33.333 15.17 15.17 43.31 3.28
5424 6765 2.787473 TTGGTCTGGTCATTAGGCTG 57.213 50.000 0.00 0.00 0.00 4.85
5436 6777 5.529060 GGTCATTAGGCTGAGGAGTTTTATG 59.471 44.000 0.00 0.00 0.00 1.90
5455 6796 2.270858 TGGAAACTAGGTATGTGCCCA 58.729 47.619 0.00 0.00 0.00 5.36
5456 6797 2.849943 TGGAAACTAGGTATGTGCCCAT 59.150 45.455 0.00 0.00 34.97 4.00
5457 6798 3.214328 GGAAACTAGGTATGTGCCCATG 58.786 50.000 0.00 0.00 32.29 3.66
5458 6799 3.371595 GGAAACTAGGTATGTGCCCATGT 60.372 47.826 0.00 0.00 32.29 3.21
5459 6800 3.281727 AACTAGGTATGTGCCCATGTG 57.718 47.619 0.00 0.00 32.29 3.21
5460 6801 2.196595 ACTAGGTATGTGCCCATGTGT 58.803 47.619 0.00 0.00 32.29 3.72
5461 6802 2.576191 ACTAGGTATGTGCCCATGTGTT 59.424 45.455 0.00 0.00 32.29 3.32
5462 6803 1.838112 AGGTATGTGCCCATGTGTTG 58.162 50.000 0.00 0.00 32.29 3.33
5463 6804 1.075374 AGGTATGTGCCCATGTGTTGT 59.925 47.619 0.00 0.00 32.29 3.32
5464 6805 1.472480 GGTATGTGCCCATGTGTTGTC 59.528 52.381 0.00 0.00 32.29 3.18
5465 6806 2.158559 GTATGTGCCCATGTGTTGTCA 58.841 47.619 0.00 0.00 32.29 3.58
5466 6807 0.961019 ATGTGCCCATGTGTTGTCAC 59.039 50.000 0.00 0.00 44.08 3.67
5467 6808 1.282570 GTGCCCATGTGTTGTCACG 59.717 57.895 0.00 0.00 46.49 4.35
5468 6809 1.896183 TGCCCATGTGTTGTCACGG 60.896 57.895 0.00 0.00 46.49 4.94
5469 6810 2.625823 GCCCATGTGTTGTCACGGG 61.626 63.158 6.86 6.86 46.49 5.28
5470 6811 1.072332 CCCATGTGTTGTCACGGGA 59.928 57.895 5.73 0.00 43.37 5.14
5471 6812 0.955428 CCCATGTGTTGTCACGGGAG 60.955 60.000 0.00 0.00 43.37 4.30
5472 6813 1.577328 CCATGTGTTGTCACGGGAGC 61.577 60.000 0.00 0.00 46.49 4.70
5473 6814 0.603707 CATGTGTTGTCACGGGAGCT 60.604 55.000 0.00 0.00 46.49 4.09
5474 6815 0.603707 ATGTGTTGTCACGGGAGCTG 60.604 55.000 0.00 0.00 46.49 4.24
5475 6816 1.227556 GTGTTGTCACGGGAGCTGT 60.228 57.895 0.00 0.00 34.79 4.40
5476 6817 0.032952 GTGTTGTCACGGGAGCTGTA 59.967 55.000 0.00 0.00 34.79 2.74
5477 6818 0.973632 TGTTGTCACGGGAGCTGTAT 59.026 50.000 0.00 0.00 0.00 2.29
5478 6819 1.346395 TGTTGTCACGGGAGCTGTATT 59.654 47.619 0.00 0.00 0.00 1.89
5479 6820 2.224426 TGTTGTCACGGGAGCTGTATTT 60.224 45.455 0.00 0.00 0.00 1.40
5480 6821 2.812011 GTTGTCACGGGAGCTGTATTTT 59.188 45.455 0.00 0.00 0.00 1.82
5481 6822 3.134574 TGTCACGGGAGCTGTATTTTT 57.865 42.857 0.00 0.00 0.00 1.94
5511 6852 9.658799 ATGTATAAATGCTAGGTATGTGCTAAG 57.341 33.333 0.00 0.00 0.00 2.18
5512 6853 8.094548 TGTATAAATGCTAGGTATGTGCTAAGG 58.905 37.037 0.00 0.00 0.00 2.69
5513 6854 5.373812 AAATGCTAGGTATGTGCTAAGGT 57.626 39.130 0.00 0.00 0.00 3.50
5514 6855 4.608948 ATGCTAGGTATGTGCTAAGGTC 57.391 45.455 0.00 0.00 0.00 3.85
5515 6856 3.371034 TGCTAGGTATGTGCTAAGGTCA 58.629 45.455 0.00 0.00 0.00 4.02
5516 6857 3.384789 TGCTAGGTATGTGCTAAGGTCAG 59.615 47.826 0.00 0.00 0.00 3.51
5517 6858 3.385111 GCTAGGTATGTGCTAAGGTCAGT 59.615 47.826 0.00 0.00 0.00 3.41
5518 6859 3.895232 AGGTATGTGCTAAGGTCAGTG 57.105 47.619 0.00 0.00 0.00 3.66
5519 6860 3.441101 AGGTATGTGCTAAGGTCAGTGA 58.559 45.455 0.00 0.00 0.00 3.41
5520 6861 3.838317 AGGTATGTGCTAAGGTCAGTGAA 59.162 43.478 0.00 0.00 0.00 3.18
5521 6862 4.286032 AGGTATGTGCTAAGGTCAGTGAAA 59.714 41.667 0.00 0.00 0.00 2.69
5522 6863 5.001232 GGTATGTGCTAAGGTCAGTGAAAA 58.999 41.667 0.00 0.00 0.00 2.29
5523 6864 5.472137 GGTATGTGCTAAGGTCAGTGAAAAA 59.528 40.000 0.00 0.00 0.00 1.94
5546 6887 8.676454 AAAAATAGCGTGTTATAATGCGAAAA 57.324 26.923 13.41 1.69 37.16 2.29
5547 6888 8.850454 AAAATAGCGTGTTATAATGCGAAAAT 57.150 26.923 13.41 3.41 37.16 1.82
5548 6889 7.836358 AATAGCGTGTTATAATGCGAAAATG 57.164 32.000 13.41 0.00 37.16 2.32
5549 6890 4.035017 AGCGTGTTATAATGCGAAAATGC 58.965 39.130 13.41 0.00 37.16 3.56
5550 6891 4.035017 GCGTGTTATAATGCGAAAATGCT 58.965 39.130 13.41 0.00 35.36 3.79
5551 6892 4.144731 GCGTGTTATAATGCGAAAATGCTC 59.855 41.667 13.41 0.00 35.36 4.26
5552 6893 5.501715 CGTGTTATAATGCGAAAATGCTCT 58.498 37.500 5.95 0.00 35.36 4.09
5553 6894 5.965334 CGTGTTATAATGCGAAAATGCTCTT 59.035 36.000 5.95 0.00 35.36 2.85
5554 6895 6.468956 CGTGTTATAATGCGAAAATGCTCTTT 59.531 34.615 5.95 0.00 35.36 2.52
5555 6896 7.638295 CGTGTTATAATGCGAAAATGCTCTTTA 59.362 33.333 5.95 0.00 35.36 1.85
5556 6897 8.947940 GTGTTATAATGCGAAAATGCTCTTTAG 58.052 33.333 0.00 0.00 35.36 1.85
5557 6898 8.888716 TGTTATAATGCGAAAATGCTCTTTAGA 58.111 29.630 0.00 0.00 35.36 2.10
5558 6899 9.374960 GTTATAATGCGAAAATGCTCTTTAGAG 57.625 33.333 2.33 2.33 44.75 2.43
5582 6923 3.313874 CTCCATGGAGCCCGAGTT 58.686 61.111 28.45 0.00 35.31 3.01
5583 6924 1.604378 CTCCATGGAGCCCGAGTTT 59.396 57.895 28.45 0.00 35.31 2.66
5584 6925 0.745845 CTCCATGGAGCCCGAGTTTG 60.746 60.000 28.45 2.18 35.31 2.93
5585 6926 1.198094 TCCATGGAGCCCGAGTTTGA 61.198 55.000 11.44 0.00 0.00 2.69
5586 6927 1.026718 CCATGGAGCCCGAGTTTGAC 61.027 60.000 5.56 0.00 0.00 3.18
5587 6928 0.036010 CATGGAGCCCGAGTTTGACT 60.036 55.000 0.00 0.00 0.00 3.41
5588 6929 0.693049 ATGGAGCCCGAGTTTGACTT 59.307 50.000 0.00 0.00 0.00 3.01
5589 6930 0.250295 TGGAGCCCGAGTTTGACTTG 60.250 55.000 0.00 0.00 0.00 3.16
5590 6931 0.034896 GGAGCCCGAGTTTGACTTGA 59.965 55.000 0.00 0.00 31.05 3.02
5591 6932 1.339151 GGAGCCCGAGTTTGACTTGAT 60.339 52.381 0.00 0.00 31.05 2.57
5592 6933 2.003301 GAGCCCGAGTTTGACTTGATC 58.997 52.381 0.00 0.00 31.05 2.92
5593 6934 1.347707 AGCCCGAGTTTGACTTGATCA 59.652 47.619 0.00 0.00 31.05 2.92
5594 6935 2.151202 GCCCGAGTTTGACTTGATCAA 58.849 47.619 8.12 8.12 45.92 2.57
5610 6951 9.571804 GACTTGATCAAAATTCAAATTTTCACG 57.428 29.630 9.88 6.81 44.38 4.35
5611 6952 9.097257 ACTTGATCAAAATTCAAATTTTCACGT 57.903 25.926 9.88 7.30 44.38 4.49
5612 6953 9.919348 CTTGATCAAAATTCAAATTTTCACGTT 57.081 25.926 9.88 0.00 44.38 3.99
5614 6955 9.913451 TGATCAAAATTCAAATTTTCACGTTTC 57.087 25.926 9.84 3.80 44.38 2.78
5615 6956 9.913451 GATCAAAATTCAAATTTTCACGTTTCA 57.087 25.926 9.84 0.00 44.38 2.69
5658 6999 9.823647 AATCCACACATACTTAGAGACATAAAG 57.176 33.333 0.00 0.00 0.00 1.85
5659 7000 7.265673 TCCACACATACTTAGAGACATAAAGC 58.734 38.462 0.00 0.00 0.00 3.51
5660 7001 7.041721 CCACACATACTTAGAGACATAAAGCA 58.958 38.462 0.00 0.00 0.00 3.91
5661 7002 7.712639 CCACACATACTTAGAGACATAAAGCAT 59.287 37.037 0.00 0.00 0.00 3.79
5662 7003 9.750125 CACACATACTTAGAGACATAAAGCATA 57.250 33.333 0.00 0.00 0.00 3.14
5668 7009 8.654230 ACTTAGAGACATAAAGCATATGTGTG 57.346 34.615 16.95 6.61 38.18 3.82
5669 7010 8.260818 ACTTAGAGACATAAAGCATATGTGTGT 58.739 33.333 16.95 14.23 38.18 3.72
5670 7011 9.750125 CTTAGAGACATAAAGCATATGTGTGTA 57.250 33.333 16.95 13.43 38.18 2.90
5673 7014 9.618890 AGAGACATAAAGCATATGTGTGTAATT 57.381 29.630 16.95 0.00 38.18 1.40
5680 7021 8.761575 AAAGCATATGTGTGTAATTTTTCAGG 57.238 30.769 4.29 0.00 0.00 3.86
5681 7022 7.701539 AGCATATGTGTGTAATTTTTCAGGA 57.298 32.000 4.29 0.00 0.00 3.86
5682 7023 8.297470 AGCATATGTGTGTAATTTTTCAGGAT 57.703 30.769 4.29 0.00 0.00 3.24
5683 7024 8.192774 AGCATATGTGTGTAATTTTTCAGGATG 58.807 33.333 4.29 0.00 37.54 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 4.453454 TCCTTCTTGGAGGCGCTA 57.547 55.556 7.64 0.00 40.56 4.26
31 32 1.807165 CGGCGTCTGTGGATGTCAG 60.807 63.158 0.00 0.00 33.03 3.51
40 41 4.664677 GACAGTGGCGGCGTCTGT 62.665 66.667 29.05 29.05 43.72 3.41
116 117 5.492895 TCACCTTCATTTCTAATTACGGCA 58.507 37.500 0.00 0.00 0.00 5.69
126 127 1.988107 TGGCTCCTCACCTTCATTTCT 59.012 47.619 0.00 0.00 0.00 2.52
156 157 1.457346 CTTCCAACATGGTGGCTCTC 58.543 55.000 25.89 0.00 39.03 3.20
170 171 1.542881 CCCTACCAACCCCCTTCCA 60.543 63.158 0.00 0.00 0.00 3.53
179 182 1.988015 TAGGTGCAGCCCTACCAAC 59.012 57.895 13.29 0.00 39.46 3.77
184 187 1.399744 CGATGGTAGGTGCAGCCCTA 61.400 60.000 13.29 5.55 38.26 3.53
197 200 2.351276 GTGCCACCCTTCGATGGT 59.649 61.111 15.59 8.81 38.34 3.55
229 232 4.641989 TCTTTTTGCCAGATCTTATGCTCC 59.358 41.667 0.00 0.00 0.00 4.70
236 239 3.077359 CCGTCTCTTTTTGCCAGATCTT 58.923 45.455 0.00 0.00 0.00 2.40
237 240 2.704572 CCGTCTCTTTTTGCCAGATCT 58.295 47.619 0.00 0.00 0.00 2.75
255 258 7.375834 TGTACTATATTGGACATCTAAAGCCG 58.624 38.462 0.00 0.00 0.00 5.52
272 276 6.438108 TGGTTTGCTTCACTACCTGTACTATA 59.562 38.462 0.00 0.00 0.00 1.31
277 281 3.735591 GTGGTTTGCTTCACTACCTGTA 58.264 45.455 0.00 0.00 0.00 2.74
305 312 4.047059 TCGTTCGCCGTCTCCCAC 62.047 66.667 0.00 0.00 37.94 4.61
310 317 2.380410 GCATTGTCGTTCGCCGTCT 61.380 57.895 0.00 0.00 37.94 4.18
348 355 4.499865 CCACGACATCTAGGGTCTACATTG 60.500 50.000 11.86 0.00 33.11 2.82
351 358 2.651455 CCACGACATCTAGGGTCTACA 58.349 52.381 11.86 0.00 33.11 2.74
383 390 2.681778 CTGGCTCCCTGACGTCCT 60.682 66.667 14.12 0.00 0.00 3.85
391 398 3.263259 AAGCTTGCCTGGCTCCCT 61.263 61.111 21.03 9.78 39.30 4.20
403 410 0.912486 AGATACGCCCCTTCAAGCTT 59.088 50.000 0.00 0.00 0.00 3.74
408 415 1.522092 CAGCAGATACGCCCCTTCA 59.478 57.895 0.00 0.00 0.00 3.02
448 459 1.520342 GCTGTCGGCATCCTCTGTC 60.520 63.158 0.00 0.00 41.35 3.51
508 520 1.404315 GCTACTTGTTGGCGCTACTCT 60.404 52.381 7.64 0.00 0.00 3.24
512 524 1.447140 CGGCTACTTGTTGGCGCTA 60.447 57.895 16.05 0.00 44.46 4.26
527 539 2.821810 GAAGCTCCTCAAGGCGGC 60.822 66.667 0.00 0.00 35.18 6.53
594 608 1.749334 CTACCTCCCCACGAGCCATC 61.749 65.000 0.00 0.00 37.27 3.51
595 609 1.762460 CTACCTCCCCACGAGCCAT 60.762 63.158 0.00 0.00 37.27 4.40
638 654 2.127118 CTGCCTTTCGTGCGCAAG 60.127 61.111 14.00 16.14 43.44 4.01
639 655 4.326766 GCTGCCTTTCGTGCGCAA 62.327 61.111 14.00 0.00 30.85 4.85
647 663 4.103103 GTTCGCGGGCTGCCTTTC 62.103 66.667 19.68 6.95 42.08 2.62
648 664 4.947147 TGTTCGCGGGCTGCCTTT 62.947 61.111 19.68 0.00 42.08 3.11
657 673 3.697439 ATCATGGGGGTGTTCGCGG 62.697 63.158 6.13 0.00 0.00 6.46
658 674 2.124736 ATCATGGGGGTGTTCGCG 60.125 61.111 0.00 0.00 0.00 5.87
659 675 2.180204 CGATCATGGGGGTGTTCGC 61.180 63.158 0.00 0.00 35.39 4.70
660 676 1.523711 CCGATCATGGGGGTGTTCG 60.524 63.158 0.00 0.00 39.67 3.95
661 677 1.823899 GCCGATCATGGGGGTGTTC 60.824 63.158 0.00 0.00 0.00 3.18
662 678 2.275418 GCCGATCATGGGGGTGTT 59.725 61.111 0.00 0.00 0.00 3.32
663 679 3.809013 GGCCGATCATGGGGGTGT 61.809 66.667 0.00 0.00 0.00 4.16
664 680 4.935495 CGGCCGATCATGGGGGTG 62.935 72.222 24.07 0.00 0.00 4.61
668 684 3.541950 ATCTGCGGCCGATCATGGG 62.542 63.158 33.48 6.75 0.00 4.00
669 685 2.031516 GATCTGCGGCCGATCATGG 61.032 63.158 33.48 11.10 37.73 3.66
670 686 2.031516 GGATCTGCGGCCGATCATG 61.032 63.158 33.48 13.06 39.17 3.07
671 687 2.345244 GGATCTGCGGCCGATCAT 59.655 61.111 33.48 16.57 39.17 2.45
672 688 3.928779 GGGATCTGCGGCCGATCA 61.929 66.667 33.48 18.03 39.17 2.92
673 689 3.928779 TGGGATCTGCGGCCGATC 61.929 66.667 33.48 22.76 37.21 3.69
674 690 4.241555 GTGGGATCTGCGGCCGAT 62.242 66.667 33.48 14.61 0.00 4.18
692 708 3.730761 CTGCTGTTGTCGCTGGGC 61.731 66.667 0.00 0.00 0.00 5.36
693 709 3.052082 CCTGCTGTTGTCGCTGGG 61.052 66.667 0.00 0.00 41.23 4.45
694 710 3.052082 CCCTGCTGTTGTCGCTGG 61.052 66.667 0.00 0.00 43.60 4.85
695 711 1.893808 AACCCTGCTGTTGTCGCTG 60.894 57.895 0.00 0.00 0.00 5.18
696 712 1.893808 CAACCCTGCTGTTGTCGCT 60.894 57.895 6.27 0.00 40.54 4.93
697 713 2.639286 CAACCCTGCTGTTGTCGC 59.361 61.111 6.27 0.00 40.54 5.19
698 714 2.260869 CCCAACCCTGCTGTTGTCG 61.261 63.158 11.52 0.00 43.22 4.35
699 715 2.564721 GCCCAACCCTGCTGTTGTC 61.565 63.158 11.52 2.63 43.22 3.18
700 716 2.521708 GCCCAACCCTGCTGTTGT 60.522 61.111 11.52 0.00 43.22 3.32
701 717 3.305516 GGCCCAACCCTGCTGTTG 61.306 66.667 0.00 7.18 44.12 3.33
702 718 4.974721 CGGCCCAACCCTGCTGTT 62.975 66.667 0.00 0.00 33.26 3.16
720 736 3.528370 CTCCTCCCCTACGTGGCG 61.528 72.222 0.00 0.00 0.00 5.69
721 737 3.155167 CCTCCTCCCCTACGTGGC 61.155 72.222 0.00 0.00 0.00 5.01
722 738 3.155167 GCCTCCTCCCCTACGTGG 61.155 72.222 0.00 0.00 0.00 4.94
723 739 3.528370 CGCCTCCTCCCCTACGTG 61.528 72.222 0.00 0.00 0.00 4.49
724 740 3.717924 CTCGCCTCCTCCCCTACGT 62.718 68.421 0.00 0.00 0.00 3.57
725 741 2.335092 TACTCGCCTCCTCCCCTACG 62.335 65.000 0.00 0.00 0.00 3.51
726 742 0.822944 GTACTCGCCTCCTCCCCTAC 60.823 65.000 0.00 0.00 0.00 3.18
727 743 0.992431 AGTACTCGCCTCCTCCCCTA 60.992 60.000 0.00 0.00 0.00 3.53
728 744 1.876546 AAGTACTCGCCTCCTCCCCT 61.877 60.000 0.00 0.00 0.00 4.79
729 745 1.381463 AAGTACTCGCCTCCTCCCC 60.381 63.158 0.00 0.00 0.00 4.81
730 746 0.683504 TGAAGTACTCGCCTCCTCCC 60.684 60.000 0.00 0.00 0.00 4.30
731 747 0.741915 CTGAAGTACTCGCCTCCTCC 59.258 60.000 0.00 0.00 0.00 4.30
732 748 0.741915 CCTGAAGTACTCGCCTCCTC 59.258 60.000 0.00 0.00 0.00 3.71
733 749 0.684805 CCCTGAAGTACTCGCCTCCT 60.685 60.000 0.00 0.00 0.00 3.69
734 750 1.677637 CCCCTGAAGTACTCGCCTCC 61.678 65.000 0.00 0.00 0.00 4.30
735 751 0.683504 TCCCCTGAAGTACTCGCCTC 60.684 60.000 0.00 0.00 0.00 4.70
736 752 0.032017 ATCCCCTGAAGTACTCGCCT 60.032 55.000 0.00 0.00 0.00 5.52
737 753 0.389757 GATCCCCTGAAGTACTCGCC 59.610 60.000 0.00 0.00 0.00 5.54
738 754 1.067821 CTGATCCCCTGAAGTACTCGC 59.932 57.143 0.00 0.00 0.00 5.03
739 755 1.683917 CCTGATCCCCTGAAGTACTCG 59.316 57.143 0.00 0.00 0.00 4.18
740 756 2.043227 CCCTGATCCCCTGAAGTACTC 58.957 57.143 0.00 0.00 0.00 2.59
741 757 1.972207 GCCCTGATCCCCTGAAGTACT 60.972 57.143 0.00 0.00 0.00 2.73
742 758 0.470341 GCCCTGATCCCCTGAAGTAC 59.530 60.000 0.00 0.00 0.00 2.73
743 759 1.048724 CGCCCTGATCCCCTGAAGTA 61.049 60.000 0.00 0.00 0.00 2.24
744 760 2.370445 CGCCCTGATCCCCTGAAGT 61.370 63.158 0.00 0.00 0.00 3.01
745 761 2.507944 CGCCCTGATCCCCTGAAG 59.492 66.667 0.00 0.00 0.00 3.02
746 762 3.797353 GCGCCCTGATCCCCTGAA 61.797 66.667 0.00 0.00 0.00 3.02
791 807 4.504916 CTCGCTCCTGCAGGTCCG 62.505 72.222 31.58 30.18 39.64 4.79
792 808 4.828925 GCTCGCTCCTGCAGGTCC 62.829 72.222 31.58 21.36 39.64 4.46
793 809 2.866085 ATTGCTCGCTCCTGCAGGTC 62.866 60.000 31.58 22.22 40.46 3.85
794 810 2.964310 ATTGCTCGCTCCTGCAGGT 61.964 57.895 31.58 6.78 40.46 4.00
795 811 2.124819 ATTGCTCGCTCCTGCAGG 60.125 61.111 27.87 27.87 40.46 4.85
796 812 2.470362 CCATTGCTCGCTCCTGCAG 61.470 63.158 6.78 6.78 40.46 4.41
797 813 2.437180 CCATTGCTCGCTCCTGCA 60.437 61.111 0.00 0.00 39.64 4.41
798 814 1.589716 AAACCATTGCTCGCTCCTGC 61.590 55.000 0.00 0.00 0.00 4.85
799 815 0.883833 AAAACCATTGCTCGCTCCTG 59.116 50.000 0.00 0.00 0.00 3.86
800 816 1.541588 GAAAAACCATTGCTCGCTCCT 59.458 47.619 0.00 0.00 0.00 3.69
801 817 1.402852 GGAAAAACCATTGCTCGCTCC 60.403 52.381 0.00 0.00 38.79 4.70
802 818 1.729149 CGGAAAAACCATTGCTCGCTC 60.729 52.381 0.00 0.00 38.90 5.03
803 819 0.240945 CGGAAAAACCATTGCTCGCT 59.759 50.000 0.00 0.00 38.90 4.93
804 820 0.039527 ACGGAAAAACCATTGCTCGC 60.040 50.000 0.00 0.00 38.90 5.03
805 821 2.050691 CAACGGAAAAACCATTGCTCG 58.949 47.619 0.00 0.00 35.09 5.03
809 825 2.524569 AGGCAACGGAAAAACCATTG 57.475 45.000 0.00 0.00 43.67 2.82
810 826 2.432510 TGAAGGCAACGGAAAAACCATT 59.567 40.909 0.00 0.00 46.39 3.16
811 827 2.035632 TGAAGGCAACGGAAAAACCAT 58.964 42.857 0.00 0.00 46.39 3.55
812 828 1.475403 TGAAGGCAACGGAAAAACCA 58.525 45.000 0.00 0.00 46.39 3.67
813 829 2.198406 GTTGAAGGCAACGGAAAAACC 58.802 47.619 0.00 0.00 44.27 3.27
824 840 2.594303 CCTGTGGCGTTGAAGGCA 60.594 61.111 12.18 0.00 44.68 4.75
825 841 2.594592 ACCTGTGGCGTTGAAGGC 60.595 61.111 0.48 0.48 32.73 4.35
826 842 1.966451 GGACCTGTGGCGTTGAAGG 60.966 63.158 0.00 0.00 35.82 3.46
827 843 0.535102 AAGGACCTGTGGCGTTGAAG 60.535 55.000 0.00 0.00 0.00 3.02
828 844 0.534203 GAAGGACCTGTGGCGTTGAA 60.534 55.000 0.00 0.00 0.00 2.69
829 845 1.070786 GAAGGACCTGTGGCGTTGA 59.929 57.895 0.00 0.00 0.00 3.18
830 846 0.817634 TTGAAGGACCTGTGGCGTTG 60.818 55.000 0.00 0.00 0.00 4.10
831 847 0.110486 ATTGAAGGACCTGTGGCGTT 59.890 50.000 0.00 0.00 0.00 4.84
832 848 0.606401 CATTGAAGGACCTGTGGCGT 60.606 55.000 0.00 0.00 0.00 5.68
833 849 1.926511 GCATTGAAGGACCTGTGGCG 61.927 60.000 0.00 0.00 0.00 5.69
834 850 1.598701 GGCATTGAAGGACCTGTGGC 61.599 60.000 0.00 0.93 0.00 5.01
835 851 0.967380 GGGCATTGAAGGACCTGTGG 60.967 60.000 0.00 0.00 0.00 4.17
836 852 1.308069 CGGGCATTGAAGGACCTGTG 61.308 60.000 0.00 0.00 0.00 3.66
837 853 1.002134 CGGGCATTGAAGGACCTGT 60.002 57.895 0.00 0.00 0.00 4.00
838 854 2.409870 GCGGGCATTGAAGGACCTG 61.410 63.158 0.00 0.00 0.00 4.00
839 855 2.044946 GCGGGCATTGAAGGACCT 60.045 61.111 0.00 0.00 0.00 3.85
840 856 3.140814 GGCGGGCATTGAAGGACC 61.141 66.667 0.00 0.00 0.00 4.46
841 857 3.140814 GGGCGGGCATTGAAGGAC 61.141 66.667 3.27 0.00 0.00 3.85
842 858 4.440829 GGGGCGGGCATTGAAGGA 62.441 66.667 3.27 0.00 0.00 3.36
853 869 3.925090 GAGTCATACCGGGGGCGG 61.925 72.222 6.32 0.00 0.00 6.13
854 870 3.151710 TGAGTCATACCGGGGGCG 61.152 66.667 6.32 0.00 0.00 6.13
855 871 2.064581 AGTGAGTCATACCGGGGGC 61.065 63.158 6.32 0.00 0.00 5.80
856 872 0.686441 TCAGTGAGTCATACCGGGGG 60.686 60.000 6.32 0.00 0.00 5.40
857 873 0.460311 GTCAGTGAGTCATACCGGGG 59.540 60.000 6.32 0.00 0.00 5.73
858 874 0.100682 CGTCAGTGAGTCATACCGGG 59.899 60.000 6.32 0.00 0.00 5.73
859 875 0.809385 ACGTCAGTGAGTCATACCGG 59.191 55.000 0.00 0.00 0.00 5.28
879 895 4.468615 AGAGTCGTCGCGAGCAGC 62.469 66.667 10.24 0.00 43.95 5.25
880 896 2.575525 CAGAGTCGTCGCGAGCAG 60.576 66.667 10.24 4.13 36.23 4.24
881 897 2.402282 AAACAGAGTCGTCGCGAGCA 62.402 55.000 10.24 0.00 36.23 4.26
882 898 1.276145 AAAACAGAGTCGTCGCGAGC 61.276 55.000 10.24 3.52 36.23 5.03
883 899 1.122680 GAAAAACAGAGTCGTCGCGAG 59.877 52.381 10.24 3.82 36.23 5.03
884 900 1.126079 GAAAAACAGAGTCGTCGCGA 58.874 50.000 3.71 3.71 0.00 5.87
885 901 0.161024 GGAAAAACAGAGTCGTCGCG 59.839 55.000 0.00 0.00 0.00 5.87
886 902 0.161024 CGGAAAAACAGAGTCGTCGC 59.839 55.000 0.00 0.00 0.00 5.19
887 903 1.484356 ACGGAAAAACAGAGTCGTCG 58.516 50.000 0.00 0.00 0.00 5.12
888 904 3.060473 CAGAACGGAAAAACAGAGTCGTC 60.060 47.826 0.00 0.00 0.00 4.20
889 905 2.864343 CAGAACGGAAAAACAGAGTCGT 59.136 45.455 0.00 0.00 0.00 4.34
890 906 2.348591 GCAGAACGGAAAAACAGAGTCG 60.349 50.000 0.00 0.00 0.00 4.18
891 907 2.872858 AGCAGAACGGAAAAACAGAGTC 59.127 45.455 0.00 0.00 0.00 3.36
892 908 2.872858 GAGCAGAACGGAAAAACAGAGT 59.127 45.455 0.00 0.00 0.00 3.24
893 909 3.134458 AGAGCAGAACGGAAAAACAGAG 58.866 45.455 0.00 0.00 0.00 3.35
907 923 3.244875 ACAGAGTCAGAGAAGAGAGCAGA 60.245 47.826 0.00 0.00 0.00 4.26
1150 1281 1.673168 AATCCTCAGAATCAAGCGGC 58.327 50.000 0.00 0.00 0.00 6.53
1176 1313 1.154205 ACCTACGCATCAATCGCAGC 61.154 55.000 0.00 0.00 0.00 5.25
1177 1321 0.855349 GACCTACGCATCAATCGCAG 59.145 55.000 0.00 0.00 0.00 5.18
1483 1733 7.654022 ATCCTCCTTTTCAGTTTGTTGTAAA 57.346 32.000 0.00 0.00 0.00 2.01
1487 1737 6.340522 ACAAATCCTCCTTTTCAGTTTGTTG 58.659 36.000 0.00 0.00 35.50 3.33
1488 1738 6.544928 ACAAATCCTCCTTTTCAGTTTGTT 57.455 33.333 0.00 0.00 35.50 2.83
1580 1899 8.010733 TCATCATTAACCCATGAAATTCCTTC 57.989 34.615 0.00 0.00 36.74 3.46
1589 1909 5.051409 TGATGCTCATCATTAACCCATGA 57.949 39.130 8.37 0.00 42.42 3.07
1590 1910 4.217767 CCTGATGCTCATCATTAACCCATG 59.782 45.833 12.40 0.00 45.74 3.66
1635 1962 4.501400 CCCCCATGAAAACTTTGTCTCAAC 60.501 45.833 0.00 0.00 0.00 3.18
1655 1983 3.181466 ACAGAAAAACACAGCAAATCCCC 60.181 43.478 0.00 0.00 0.00 4.81
1658 1986 5.915196 GTCCTACAGAAAAACACAGCAAATC 59.085 40.000 0.00 0.00 0.00 2.17
1664 1992 6.036083 CCGATATGTCCTACAGAAAAACACAG 59.964 42.308 0.00 0.00 0.00 3.66
1712 2041 1.508632 CACTCGTCGTGTTGGGAATT 58.491 50.000 0.00 0.00 38.84 2.17
1714 2043 4.742274 CACTCGTCGTGTTGGGAA 57.258 55.556 0.00 0.00 38.84 3.97
1724 2053 0.387929 TCACCTTGGACACACTCGTC 59.612 55.000 0.00 0.00 35.03 4.20
1734 2063 1.822114 TTCCGCGTCATCACCTTGGA 61.822 55.000 4.92 0.00 0.00 3.53
1820 2149 5.570234 TGTGGTACTGAAGAAAAACAACC 57.430 39.130 0.00 0.00 0.00 3.77
1889 2561 7.952101 CGACTTCAGTTACTGACAAAATACATG 59.048 37.037 15.26 0.00 40.46 3.21
2628 3396 7.547285 AACGAAATCACGTCATACATTTTTG 57.453 32.000 0.00 0.00 45.83 2.44
2668 3450 7.148641 ACACTACAAAGGATAATCGATAGCAG 58.851 38.462 0.00 0.00 0.00 4.24
2677 3459 5.296780 CCGATGCAACACTACAAAGGATAAT 59.703 40.000 0.00 0.00 0.00 1.28
2695 3477 3.509575 AGATCTGAAGGAGATACCGATGC 59.490 47.826 0.00 0.00 41.91 3.91
3009 3838 6.183360 CGGAAAGTTAACATCGCTTTAGGAAT 60.183 38.462 8.61 0.00 33.22 3.01
3117 3983 3.000322 GTCCGCAACAAGAATATGACGAG 60.000 47.826 0.00 0.00 0.00 4.18
3167 4039 6.915544 TGTGCATAGAAATGAACATCTCTC 57.084 37.500 0.00 0.00 45.19 3.20
3199 4078 9.844257 AATCTGTCCTCCTATTCAAAGATTTAG 57.156 33.333 0.00 0.00 30.91 1.85
3229 4108 1.272490 CTGTAGAGCGTCCAAACAGGA 59.728 52.381 0.00 0.00 46.75 3.86
3341 4245 1.981495 CCTTCACCTCCCAAGAGAGTT 59.019 52.381 0.00 0.00 43.39 3.01
3345 4249 2.106511 TGAAACCTTCACCTCCCAAGAG 59.893 50.000 0.00 0.00 35.81 2.85
3384 4289 8.430063 GCAACAAAAATAGAATTCATGTGTCAG 58.570 33.333 8.44 1.49 0.00 3.51
3385 4290 7.924947 TGCAACAAAAATAGAATTCATGTGTCA 59.075 29.630 8.44 2.80 0.00 3.58
3387 4292 8.836268 ATGCAACAAAAATAGAATTCATGTGT 57.164 26.923 8.44 0.00 0.00 3.72
3561 4467 7.712205 ACCTAACGAGTACACAAAACTTGTTAT 59.288 33.333 13.66 1.83 45.84 1.89
3566 4472 4.741676 CGACCTAACGAGTACACAAAACTT 59.258 41.667 0.00 0.00 35.09 2.66
3567 4473 4.036734 TCGACCTAACGAGTACACAAAACT 59.963 41.667 0.00 0.00 37.37 2.66
3568 4474 4.290155 TCGACCTAACGAGTACACAAAAC 58.710 43.478 0.00 0.00 37.37 2.43
3774 4694 1.320344 ATCTGAGGCTGCCGTACGAA 61.320 55.000 18.76 3.42 0.00 3.85
4040 4983 7.001674 TGCCTTCTTGTTTTCTGTTCCTAATA 58.998 34.615 0.00 0.00 0.00 0.98
4237 5310 0.449388 GCATGCAGCCACTACTGTTC 59.551 55.000 14.21 0.00 39.96 3.18
4238 5311 0.250858 TGCATGCAGCCACTACTGTT 60.251 50.000 18.46 0.00 44.83 3.16
4239 5312 0.034767 ATGCATGCAGCCACTACTGT 60.035 50.000 26.69 1.43 44.83 3.55
4240 5313 0.661552 GATGCATGCAGCCACTACTG 59.338 55.000 25.21 0.00 44.83 2.74
4241 5314 0.812811 CGATGCATGCAGCCACTACT 60.813 55.000 28.76 8.20 44.83 2.57
4242 5315 1.091771 ACGATGCATGCAGCCACTAC 61.092 55.000 28.76 11.07 44.83 2.73
4243 5316 0.811219 GACGATGCATGCAGCCACTA 60.811 55.000 28.76 1.75 44.83 2.74
4244 5317 2.045634 ACGATGCATGCAGCCACT 60.046 55.556 28.76 10.64 44.83 4.00
4245 5318 2.406401 GACGATGCATGCAGCCAC 59.594 61.111 28.76 18.86 44.83 5.01
4246 5319 2.825387 GGACGATGCATGCAGCCA 60.825 61.111 28.76 3.84 44.83 4.75
4247 5320 2.825387 TGGACGATGCATGCAGCC 60.825 61.111 28.76 23.21 44.83 4.85
4248 5321 1.164662 ATCTGGACGATGCATGCAGC 61.165 55.000 25.69 25.69 45.96 5.25
4249 5322 0.586802 CATCTGGACGATGCATGCAG 59.413 55.000 26.69 15.79 42.75 4.41
4250 5323 2.697819 CATCTGGACGATGCATGCA 58.302 52.632 25.04 25.04 42.75 3.96
4257 5330 1.445095 GCCTCTGCATCTGGACGAT 59.555 57.895 0.00 0.00 37.47 3.73
4258 5331 2.725312 GGCCTCTGCATCTGGACGA 61.725 63.158 0.00 0.00 40.13 4.20
4259 5332 2.202987 GGCCTCTGCATCTGGACG 60.203 66.667 0.00 0.00 40.13 4.79
4260 5333 2.202987 CGGCCTCTGCATCTGGAC 60.203 66.667 0.00 0.35 40.13 4.02
4261 5334 3.473647 CCGGCCTCTGCATCTGGA 61.474 66.667 0.00 0.00 40.13 3.86
4262 5335 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
4263 5336 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
4275 5348 4.499116 ATGGAGGAGGACCCCCGG 62.499 72.222 0.00 0.00 37.58 5.73
4276 5349 1.984288 GAAATGGAGGAGGACCCCCG 61.984 65.000 0.00 0.00 37.58 5.73
4277 5350 0.624795 AGAAATGGAGGAGGACCCCC 60.625 60.000 0.00 0.00 36.73 5.40
4278 5351 2.191981 TAGAAATGGAGGAGGACCCC 57.808 55.000 0.00 0.00 36.73 4.95
4279 5352 4.586306 TTTTAGAAATGGAGGAGGACCC 57.414 45.455 0.00 0.00 36.73 4.46
4308 5381 9.628746 CATCATCATCATACTGTTCAAAACAAA 57.371 29.630 0.00 0.00 41.61 2.83
4309 5382 9.012161 TCATCATCATCATACTGTTCAAAACAA 57.988 29.630 0.00 0.00 41.61 2.83
4310 5383 8.564509 TCATCATCATCATACTGTTCAAAACA 57.435 30.769 0.00 0.00 39.52 2.83
4311 5384 9.499585 CTTCATCATCATCATACTGTTCAAAAC 57.500 33.333 0.00 0.00 0.00 2.43
4312 5385 8.680001 CCTTCATCATCATCATACTGTTCAAAA 58.320 33.333 0.00 0.00 0.00 2.44
4313 5386 7.830697 ACCTTCATCATCATCATACTGTTCAAA 59.169 33.333 0.00 0.00 0.00 2.69
4314 5387 7.281549 CACCTTCATCATCATCATACTGTTCAA 59.718 37.037 0.00 0.00 0.00 2.69
4315 5388 6.764560 CACCTTCATCATCATCATACTGTTCA 59.235 38.462 0.00 0.00 0.00 3.18
4453 5527 1.413767 GATGCAGACGACACGCGAAT 61.414 55.000 15.93 0.00 44.57 3.34
4587 5685 3.057174 ACCTGAAACAGCAAAACGAAACA 60.057 39.130 0.00 0.00 0.00 2.83
4588 5686 3.507786 ACCTGAAACAGCAAAACGAAAC 58.492 40.909 0.00 0.00 0.00 2.78
4613 5711 1.218047 GTCGTCCATGTGCAGCCTA 59.782 57.895 0.00 0.00 0.00 3.93
4660 5759 5.358090 TCGAAGTATCTACAGACGACATCT 58.642 41.667 0.00 0.00 38.66 2.90
4663 5762 4.874396 ACATCGAAGTATCTACAGACGACA 59.126 41.667 0.00 0.00 33.31 4.35
4686 5785 0.106469 ACTGGCTAGCATCTCCTCGA 60.106 55.000 18.24 0.00 0.00 4.04
4688 5787 0.249826 GCACTGGCTAGCATCTCCTC 60.250 60.000 18.24 0.00 36.96 3.71
4695 5835 2.046604 CAGCTGCACTGGCTAGCA 60.047 61.111 18.24 1.68 43.19 3.49
4775 5940 6.426646 AGTATTCTCTTTGTGTCTGAGGTT 57.573 37.500 0.00 0.00 0.00 3.50
4809 5981 5.770663 TCTTCCTCCTGCATAGTACATCTAC 59.229 44.000 0.00 0.00 0.00 2.59
4821 5993 1.351076 TGTGTGATCTTCCTCCTGCA 58.649 50.000 0.00 0.00 0.00 4.41
4831 6003 1.453155 GGCCGTGATTTGTGTGATCT 58.547 50.000 0.00 0.00 0.00 2.75
4890 6091 2.557924 AGAATGAATGCAAACGCTGGAA 59.442 40.909 0.00 0.00 0.00 3.53
4912 6113 7.961325 AAGAAACTCTCTCTGAAGACATTTC 57.039 36.000 0.00 0.00 31.02 2.17
4929 6130 8.964476 TGTTGTCAGAAGAAGAATAAGAAACT 57.036 30.769 0.00 0.00 0.00 2.66
4937 6141 3.395941 ACCCCTGTTGTCAGAAGAAGAAT 59.604 43.478 0.00 0.00 43.76 2.40
5073 6292 7.328493 GGCCATAACAACTAACAATTGTTCTTC 59.672 37.037 26.46 6.45 44.97 2.87
5076 6295 6.451393 TGGCCATAACAACTAACAATTGTTC 58.549 36.000 26.46 8.70 44.97 3.18
5087 6307 4.406456 TCAGTCAATTGGCCATAACAACT 58.594 39.130 6.09 4.25 0.00 3.16
5211 6519 4.258543 TCAGCCTACTTTTTATCCGTTGG 58.741 43.478 0.00 0.00 0.00 3.77
5333 6641 9.707957 TGACCCTAACATATTTTTGGTGATATT 57.292 29.630 2.16 0.00 0.00 1.28
5334 6642 9.131791 GTGACCCTAACATATTTTTGGTGATAT 57.868 33.333 2.16 0.00 0.00 1.63
5335 6643 7.281324 CGTGACCCTAACATATTTTTGGTGATA 59.719 37.037 2.16 0.00 0.00 2.15
5336 6644 6.094881 CGTGACCCTAACATATTTTTGGTGAT 59.905 38.462 2.16 0.00 0.00 3.06
5337 6645 5.413213 CGTGACCCTAACATATTTTTGGTGA 59.587 40.000 2.16 0.00 0.00 4.02
5338 6646 5.636837 CGTGACCCTAACATATTTTTGGTG 58.363 41.667 2.16 0.00 0.00 4.17
5339 6647 4.157105 GCGTGACCCTAACATATTTTTGGT 59.843 41.667 2.16 0.00 0.00 3.67
5340 6648 4.156922 TGCGTGACCCTAACATATTTTTGG 59.843 41.667 0.00 0.00 0.00 3.28
5341 6649 5.303747 TGCGTGACCCTAACATATTTTTG 57.696 39.130 0.00 0.00 0.00 2.44
5436 6777 3.214328 CATGGGCACATACCTAGTTTCC 58.786 50.000 0.00 0.00 34.99 3.13
5455 6796 0.603707 CAGCTCCCGTGACAACACAT 60.604 55.000 0.00 0.00 46.20 3.21
5456 6797 1.227527 CAGCTCCCGTGACAACACA 60.228 57.895 0.00 0.00 46.20 3.72
5457 6798 0.032952 TACAGCTCCCGTGACAACAC 59.967 55.000 0.00 0.00 42.88 3.32
5458 6799 0.973632 ATACAGCTCCCGTGACAACA 59.026 50.000 0.00 0.00 0.00 3.33
5459 6800 2.094762 AATACAGCTCCCGTGACAAC 57.905 50.000 0.00 0.00 0.00 3.32
5460 6801 2.851263 AAATACAGCTCCCGTGACAA 57.149 45.000 0.00 0.00 0.00 3.18
5461 6802 2.851263 AAAATACAGCTCCCGTGACA 57.149 45.000 0.00 0.00 0.00 3.58
5485 6826 9.658799 CTTAGCACATACCTAGCATTTATACAT 57.341 33.333 0.00 0.00 0.00 2.29
5486 6827 8.094548 CCTTAGCACATACCTAGCATTTATACA 58.905 37.037 0.00 0.00 0.00 2.29
5487 6828 8.095169 ACCTTAGCACATACCTAGCATTTATAC 58.905 37.037 0.00 0.00 0.00 1.47
5488 6829 8.202461 ACCTTAGCACATACCTAGCATTTATA 57.798 34.615 0.00 0.00 0.00 0.98
5489 6830 7.079451 ACCTTAGCACATACCTAGCATTTAT 57.921 36.000 0.00 0.00 0.00 1.40
5490 6831 6.099125 TGACCTTAGCACATACCTAGCATTTA 59.901 38.462 0.00 0.00 0.00 1.40
5491 6832 5.104527 TGACCTTAGCACATACCTAGCATTT 60.105 40.000 0.00 0.00 0.00 2.32
5492 6833 4.408921 TGACCTTAGCACATACCTAGCATT 59.591 41.667 0.00 0.00 0.00 3.56
5493 6834 3.967326 TGACCTTAGCACATACCTAGCAT 59.033 43.478 0.00 0.00 0.00 3.79
5494 6835 3.371034 TGACCTTAGCACATACCTAGCA 58.629 45.455 0.00 0.00 0.00 3.49
5495 6836 3.385111 ACTGACCTTAGCACATACCTAGC 59.615 47.826 0.00 0.00 0.00 3.42
5496 6837 4.645136 TCACTGACCTTAGCACATACCTAG 59.355 45.833 0.00 0.00 0.00 3.02
5497 6838 4.606210 TCACTGACCTTAGCACATACCTA 58.394 43.478 0.00 0.00 0.00 3.08
5498 6839 3.441101 TCACTGACCTTAGCACATACCT 58.559 45.455 0.00 0.00 0.00 3.08
5499 6840 3.887621 TCACTGACCTTAGCACATACC 57.112 47.619 0.00 0.00 0.00 2.73
5500 6841 6.554334 TTTTTCACTGACCTTAGCACATAC 57.446 37.500 0.00 0.00 0.00 2.39
5521 6862 8.676454 TTTTCGCATTATAACACGCTATTTTT 57.324 26.923 4.50 0.00 0.00 1.94
5522 6863 8.742188 CATTTTCGCATTATAACACGCTATTTT 58.258 29.630 4.50 0.00 0.00 1.82
5523 6864 7.096640 GCATTTTCGCATTATAACACGCTATTT 60.097 33.333 4.50 0.00 0.00 1.40
5524 6865 6.359617 GCATTTTCGCATTATAACACGCTATT 59.640 34.615 4.50 0.00 0.00 1.73
5525 6866 5.851177 GCATTTTCGCATTATAACACGCTAT 59.149 36.000 4.50 0.00 0.00 2.97
5526 6867 5.007234 AGCATTTTCGCATTATAACACGCTA 59.993 36.000 4.50 0.00 0.00 4.26
5527 6868 4.035017 GCATTTTCGCATTATAACACGCT 58.965 39.130 4.50 0.00 0.00 5.07
5528 6869 4.035017 AGCATTTTCGCATTATAACACGC 58.965 39.130 4.50 0.00 0.00 5.34
5529 6870 5.501715 AGAGCATTTTCGCATTATAACACG 58.498 37.500 3.21 3.21 0.00 4.49
5530 6871 7.740519 AAAGAGCATTTTCGCATTATAACAC 57.259 32.000 0.00 0.00 0.00 3.32
5531 6872 8.888716 TCTAAAGAGCATTTTCGCATTATAACA 58.111 29.630 0.00 0.00 0.00 2.41
5532 6873 9.374960 CTCTAAAGAGCATTTTCGCATTATAAC 57.625 33.333 0.00 0.00 35.13 1.89
5565 6906 0.745845 CAAACTCGGGCTCCATGGAG 60.746 60.000 33.73 33.73 44.56 3.86
5566 6907 1.198094 TCAAACTCGGGCTCCATGGA 61.198 55.000 15.27 15.27 0.00 3.41
5567 6908 1.026718 GTCAAACTCGGGCTCCATGG 61.027 60.000 4.97 4.97 0.00 3.66
5568 6909 0.036010 AGTCAAACTCGGGCTCCATG 60.036 55.000 0.00 0.00 0.00 3.66
5569 6910 0.693049 AAGTCAAACTCGGGCTCCAT 59.307 50.000 0.00 0.00 0.00 3.41
5570 6911 0.250295 CAAGTCAAACTCGGGCTCCA 60.250 55.000 0.00 0.00 0.00 3.86
5571 6912 0.034896 TCAAGTCAAACTCGGGCTCC 59.965 55.000 0.00 0.00 0.00 4.70
5572 6913 2.003301 GATCAAGTCAAACTCGGGCTC 58.997 52.381 0.00 0.00 0.00 4.70
5573 6914 1.347707 TGATCAAGTCAAACTCGGGCT 59.652 47.619 0.00 0.00 32.78 5.19
5574 6915 1.808411 TGATCAAGTCAAACTCGGGC 58.192 50.000 0.00 0.00 32.78 6.13
5584 6925 9.571804 CGTGAAAATTTGAATTTTGATCAAGTC 57.428 29.630 16.64 8.32 45.70 3.01
5585 6926 9.097257 ACGTGAAAATTTGAATTTTGATCAAGT 57.903 25.926 16.64 13.72 45.70 3.16
5586 6927 9.919348 AACGTGAAAATTTGAATTTTGATCAAG 57.081 25.926 16.64 13.24 45.70 3.02
5588 6929 9.913451 GAAACGTGAAAATTTGAATTTTGATCA 57.087 25.926 16.64 8.09 45.70 2.92
5589 6930 9.913451 TGAAACGTGAAAATTTGAATTTTGATC 57.087 25.926 16.64 5.98 45.70 2.92
5632 6973 9.823647 CTTTATGTCTCTAAGTATGTGTGGATT 57.176 33.333 0.00 0.00 0.00 3.01
5633 6974 7.928706 GCTTTATGTCTCTAAGTATGTGTGGAT 59.071 37.037 0.00 0.00 0.00 3.41
5634 6975 7.093509 TGCTTTATGTCTCTAAGTATGTGTGGA 60.094 37.037 0.00 0.00 0.00 4.02
5635 6976 7.041721 TGCTTTATGTCTCTAAGTATGTGTGG 58.958 38.462 0.00 0.00 0.00 4.17
5636 6977 8.654230 ATGCTTTATGTCTCTAAGTATGTGTG 57.346 34.615 0.00 0.00 0.00 3.82
5642 6983 9.750125 CACACATATGCTTTATGTCTCTAAGTA 57.250 33.333 1.58 0.00 36.13 2.24
5643 6984 8.260818 ACACACATATGCTTTATGTCTCTAAGT 58.739 33.333 1.58 2.93 36.13 2.24
5644 6985 8.654230 ACACACATATGCTTTATGTCTCTAAG 57.346 34.615 1.58 2.46 36.13 2.18
5647 6988 9.618890 AATTACACACATATGCTTTATGTCTCT 57.381 29.630 1.58 0.42 36.13 3.10
5654 6995 9.853555 CCTGAAAAATTACACACATATGCTTTA 57.146 29.630 1.58 0.00 0.00 1.85
5655 6996 8.584157 TCCTGAAAAATTACACACATATGCTTT 58.416 29.630 1.58 0.00 0.00 3.51
5656 6997 8.121305 TCCTGAAAAATTACACACATATGCTT 57.879 30.769 1.58 0.00 0.00 3.91
5657 6998 7.701539 TCCTGAAAAATTACACACATATGCT 57.298 32.000 1.58 0.00 0.00 3.79
5658 6999 8.190122 TCATCCTGAAAAATTACACACATATGC 58.810 33.333 1.58 0.00 0.00 3.14
5661 7002 9.906660 GTTTCATCCTGAAAAATTACACACATA 57.093 29.630 4.01 0.00 46.53 2.29
5662 7003 8.420222 TGTTTCATCCTGAAAAATTACACACAT 58.580 29.630 4.01 0.00 46.53 3.21
5663 7004 7.704472 GTGTTTCATCCTGAAAAATTACACACA 59.296 33.333 13.09 1.19 46.53 3.72
5664 7005 7.920682 AGTGTTTCATCCTGAAAAATTACACAC 59.079 33.333 17.34 13.44 46.53 3.82
5665 7006 8.006298 AGTGTTTCATCCTGAAAAATTACACA 57.994 30.769 17.34 5.05 46.53 3.72
5666 7007 8.871686 AAGTGTTTCATCCTGAAAAATTACAC 57.128 30.769 11.22 11.22 46.53 2.90
5674 7015 9.748708 CTCATTTTAAAGTGTTTCATCCTGAAA 57.251 29.630 10.15 0.00 43.37 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.