Multiple sequence alignment - TraesCS2A01G357800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G357800 chr2A 100.000 8402 0 0 1 8402 602437840 602446241 0.000000e+00 15516.0
1 TraesCS2A01G357800 chr2A 100.000 300 0 0 3233 3532 18596992 18596693 9.530000e-154 555.0
2 TraesCS2A01G357800 chr2A 100.000 299 0 0 3234 3532 597847819 597848117 3.430000e-153 553.0
3 TraesCS2A01G357800 chr2A 99.333 300 2 0 3233 3532 15845688 15845389 2.060000e-150 544.0
4 TraesCS2A01G357800 chr2D 96.050 2380 52 17 6046 8402 459293434 459295794 0.000000e+00 3836.0
5 TraesCS2A01G357800 chr2D 95.431 2364 45 14 3535 5882 459291109 459293425 0.000000e+00 3709.0
6 TraesCS2A01G357800 chr2D 93.564 1849 47 23 1426 3235 459289259 459291074 0.000000e+00 2689.0
7 TraesCS2A01G357800 chr2D 89.375 1440 119 14 1 1407 459287833 459289271 0.000000e+00 1781.0
8 TraesCS2A01G357800 chr2D 79.448 905 146 22 1 873 630542894 630541998 9.330000e-169 604.0
9 TraesCS2A01G357800 chr2D 81.412 694 99 17 203 872 617110552 617111239 2.670000e-149 540.0
10 TraesCS2A01G357800 chr2D 77.202 579 88 31 130 694 351979538 351980086 1.770000e-76 298.0
11 TraesCS2A01G357800 chr2D 95.808 167 7 0 5880 6046 130727673 130727507 3.870000e-68 270.0
12 TraesCS2A01G357800 chr2D 94.767 172 9 0 5880 6051 623354684 623354513 1.390000e-67 268.0
13 TraesCS2A01G357800 chr2B 95.786 2278 81 9 3535 5799 540425987 540428262 0.000000e+00 3661.0
14 TraesCS2A01G357800 chr2B 93.348 1849 64 19 1426 3235 540424124 540425952 0.000000e+00 2678.0
15 TraesCS2A01G357800 chr2B 92.023 865 53 11 6046 6894 540428512 540429376 0.000000e+00 1201.0
16 TraesCS2A01G357800 chr2B 88.578 928 77 19 6899 7808 540429483 540430399 0.000000e+00 1099.0
17 TraesCS2A01G357800 chr2B 92.177 588 31 8 7817 8394 540430441 540431023 0.000000e+00 817.0
18 TraesCS2A01G357800 chr2B 93.542 511 31 2 898 1407 540423627 540424136 0.000000e+00 760.0
19 TraesCS2A01G357800 chr2B 87.356 87 1 4 5796 5882 540428427 540428503 3.230000e-14 91.6
20 TraesCS2A01G357800 chr2B 100.000 30 0 0 877 906 540423420 540423449 1.000000e-03 56.5
21 TraesCS2A01G357800 chr7D 82.000 900 128 26 1 876 491793708 491792819 0.000000e+00 734.0
22 TraesCS2A01G357800 chr7D 78.788 297 52 9 549 839 392647627 392647336 1.110000e-43 189.0
23 TraesCS2A01G357800 chr3D 80.396 908 131 21 1 873 295266992 295266097 0.000000e+00 647.0
24 TraesCS2A01G357800 chr5B 79.978 894 147 17 2 869 552919132 552920019 1.540000e-176 630.0
25 TraesCS2A01G357800 chr6A 83.168 707 94 13 3 695 140541590 140542285 2.580000e-174 623.0
26 TraesCS2A01G357800 chr6A 99.666 299 1 0 3234 3532 410575458 410575756 1.590000e-151 547.0
27 TraesCS2A01G357800 chr6A 97.024 168 5 0 5876 6043 39136599 39136766 4.960000e-72 283.0
28 TraesCS2A01G357800 chr6A 95.808 167 6 1 5879 6044 370675605 370675439 1.390000e-67 268.0
29 TraesCS2A01G357800 chr1B 82.602 661 101 12 6 657 308579255 308578600 9.460000e-159 571.0
30 TraesCS2A01G357800 chr1B 97.771 314 5 2 3234 3545 480414195 480413882 2.670000e-149 540.0
31 TraesCS2A01G357800 chr1B 96.386 166 6 0 5878 6043 482699043 482698878 2.990000e-69 274.0
32 TraesCS2A01G357800 chr7A 99.016 305 3 0 3234 3538 616469993 616469689 1.590000e-151 547.0
33 TraesCS2A01G357800 chr6B 99.666 299 1 0 3234 3532 547713654 547713952 1.590000e-151 547.0
34 TraesCS2A01G357800 chr6B 79.784 742 123 21 145 872 248394534 248393806 1.620000e-141 514.0
35 TraesCS2A01G357800 chr6B 94.318 176 9 1 5869 6043 226362655 226362480 1.390000e-67 268.0
36 TraesCS2A01G357800 chr6B 84.772 197 22 5 1 190 679986444 679986249 3.100000e-44 191.0
37 TraesCS2A01G357800 chr3A 98.083 313 5 1 3233 3545 451653521 451653210 2.060000e-150 544.0
38 TraesCS2A01G357800 chr5A 98.377 308 5 0 3234 3541 404145783 404145476 7.420000e-150 542.0
39 TraesCS2A01G357800 chr5A 80.857 700 108 19 145 835 23180034 23180716 2.080000e-145 527.0
40 TraesCS2A01G357800 chr6D 94.798 173 8 1 5873 6044 260024503 260024675 1.390000e-67 268.0
41 TraesCS2A01G357800 chr5D 94.286 175 9 1 5874 6047 198477558 198477384 5.000000e-67 267.0
42 TraesCS2A01G357800 chr4B 94.767 172 8 1 5873 6043 380656579 380656750 5.000000e-67 267.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G357800 chr2A 602437840 602446241 8401 False 15516.0000 15516 100.00000 1 8402 1 chr2A.!!$F2 8401
1 TraesCS2A01G357800 chr2D 459287833 459295794 7961 False 3003.7500 3836 93.60500 1 8402 4 chr2D.!!$F3 8401
2 TraesCS2A01G357800 chr2D 630541998 630542894 896 True 604.0000 604 79.44800 1 873 1 chr2D.!!$R3 872
3 TraesCS2A01G357800 chr2D 617110552 617111239 687 False 540.0000 540 81.41200 203 872 1 chr2D.!!$F2 669
4 TraesCS2A01G357800 chr2D 351979538 351980086 548 False 298.0000 298 77.20200 130 694 1 chr2D.!!$F1 564
5 TraesCS2A01G357800 chr2B 540423420 540431023 7603 False 1295.5125 3661 92.85125 877 8394 8 chr2B.!!$F1 7517
6 TraesCS2A01G357800 chr7D 491792819 491793708 889 True 734.0000 734 82.00000 1 876 1 chr7D.!!$R2 875
7 TraesCS2A01G357800 chr3D 295266097 295266992 895 True 647.0000 647 80.39600 1 873 1 chr3D.!!$R1 872
8 TraesCS2A01G357800 chr5B 552919132 552920019 887 False 630.0000 630 79.97800 2 869 1 chr5B.!!$F1 867
9 TraesCS2A01G357800 chr6A 140541590 140542285 695 False 623.0000 623 83.16800 3 695 1 chr6A.!!$F2 692
10 TraesCS2A01G357800 chr1B 308578600 308579255 655 True 571.0000 571 82.60200 6 657 1 chr1B.!!$R1 651
11 TraesCS2A01G357800 chr6B 248393806 248394534 728 True 514.0000 514 79.78400 145 872 1 chr6B.!!$R2 727
12 TraesCS2A01G357800 chr5A 23180034 23180716 682 False 527.0000 527 80.85700 145 835 1 chr5A.!!$F1 690

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 93 0.242825 GTTGAGGTCGATGGTCACGA 59.757 55.000 0.00 0.00 37.43 4.35 F
487 510 0.472471 TTCTTCTTCTTGGGTGGCGT 59.528 50.000 0.00 0.00 0.00 5.68 F
1503 1763 0.028902 GTGCCGTGTTCTTGGTTCAC 59.971 55.000 0.00 0.00 0.00 3.18 F
1933 2213 1.146982 ACATGTAAAAGGCCCCAGTGT 59.853 47.619 0.00 0.00 0.00 3.55 F
2436 2719 0.899717 TTGAATCCTTGTGCCCCTGC 60.900 55.000 0.00 0.00 38.26 4.85 F
3235 3538 1.808945 CGCCTTCTGATGCTTGTTTCT 59.191 47.619 0.00 0.00 0.00 2.52 F
4158 4464 1.895020 TATTGGGCTTCGGTCAGCGT 61.895 55.000 0.00 0.00 41.12 5.07 F
4481 4788 1.002366 GTACATGTGCTCCAGCTTCG 58.998 55.000 9.11 0.00 42.66 3.79 F
5466 5784 1.152398 GGATGGGATGGGCAAGCAT 60.152 57.895 0.00 0.00 0.00 3.79 F
6051 6541 0.105039 CGGAGGGAGTACAAGCCATC 59.895 60.000 0.00 0.49 34.39 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1482 1741 0.307760 GAACCAAGAACACGGCACTG 59.692 55.000 0.00 0.00 0.00 3.66 R
1923 2203 0.328258 ACTGATACAACACTGGGGCC 59.672 55.000 0.00 0.00 0.00 5.80 R
2436 2719 2.413837 TCCTTCCTTTTCGAGCGAAAG 58.586 47.619 16.25 11.27 43.75 2.62 R
3864 4170 2.026636 TGTTCCTGGGAAAATAGACCGG 60.027 50.000 0.00 0.00 35.75 5.28 R
4403 4710 0.385473 CCGAAAACGTGTGCCATCAC 60.385 55.000 0.00 0.00 43.40 3.06 R
4481 4788 2.229675 ACGTTAGGCCCGCTTAATAC 57.770 50.000 0.00 0.00 0.00 1.89 R
6032 6522 0.105039 GATGGCTTGTACTCCCTCCG 59.895 60.000 0.00 0.00 0.00 4.63 R
6033 6523 1.501582 AGATGGCTTGTACTCCCTCC 58.498 55.000 0.00 0.00 0.00 4.30 R
7080 7698 1.069823 CTCCAGTGTTCAGTCACAGCT 59.930 52.381 0.00 0.00 40.37 4.24 R
7856 8531 2.244695 ACCTGAACACCTCGTATGTGA 58.755 47.619 8.32 0.00 37.18 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.312799 ATGTCGGCTGGCATCTCA 58.687 55.556 6.86 0.00 0.00 3.27
90 93 0.242825 GTTGAGGTCGATGGTCACGA 59.757 55.000 0.00 0.00 37.43 4.35
246 257 4.162690 GGAATGCCGACGAGCCCT 62.163 66.667 0.00 0.00 0.00 5.19
355 368 2.675423 GGGCGTTGGTTTCCTCCC 60.675 66.667 0.00 0.00 0.00 4.30
363 376 2.281484 GTTTCCTCCCGCTGTGCA 60.281 61.111 0.00 0.00 0.00 4.57
438 452 2.592993 CGGCCCTTCCTCTTGACCA 61.593 63.158 0.00 0.00 0.00 4.02
442 456 1.628846 GCCCTTCCTCTTGACCAACTA 59.371 52.381 0.00 0.00 0.00 2.24
446 460 3.325135 CCTTCCTCTTGACCAACTACACT 59.675 47.826 0.00 0.00 0.00 3.55
487 510 0.472471 TTCTTCTTCTTGGGTGGCGT 59.528 50.000 0.00 0.00 0.00 5.68
642 680 1.074889 GCAGGAGGGTTTGGGAAAGTA 59.925 52.381 0.00 0.00 0.00 2.24
799 854 3.429207 TGTTCGTTTGAATCGACGCATTA 59.571 39.130 0.00 0.00 39.03 1.90
800 855 4.084485 TGTTCGTTTGAATCGACGCATTAA 60.084 37.500 0.00 0.00 39.03 1.40
813 868 7.872163 TCGACGCATTAAACTAACTTTTCTA 57.128 32.000 0.00 0.00 0.00 2.10
839 894 1.301322 TGATCCAAACAGACGCGCA 60.301 52.632 5.73 0.00 0.00 6.09
859 914 1.942657 ACGGATCAAATGAATCGGCAG 59.057 47.619 11.45 0.00 0.00 4.85
862 917 3.699067 GGATCAAATGAATCGGCAGTTG 58.301 45.455 0.00 0.00 43.11 3.16
864 919 2.789213 TCAAATGAATCGGCAGTTGGA 58.211 42.857 11.78 0.94 42.31 3.53
866 921 2.489329 CAAATGAATCGGCAGTTGGAGT 59.511 45.455 0.00 0.00 39.43 3.85
868 923 1.522668 TGAATCGGCAGTTGGAGTTG 58.477 50.000 0.00 0.00 0.00 3.16
869 924 1.202758 TGAATCGGCAGTTGGAGTTGT 60.203 47.619 0.00 0.00 0.00 3.32
872 927 1.334160 TCGGCAGTTGGAGTTGTCTA 58.666 50.000 0.00 0.00 0.00 2.59
873 928 1.272490 TCGGCAGTTGGAGTTGTCTAG 59.728 52.381 0.00 0.00 0.00 2.43
874 929 1.000955 CGGCAGTTGGAGTTGTCTAGT 59.999 52.381 0.00 0.00 0.00 2.57
918 1161 2.221299 CGGGGTGGACCAAAGGAGA 61.221 63.158 0.00 0.00 42.91 3.71
1007 1250 1.507141 CCGCACTCCCACTGACAAAC 61.507 60.000 0.00 0.00 0.00 2.93
1037 1292 4.028490 CACCCCTGGCGGCAAGTA 62.028 66.667 14.48 0.00 0.00 2.24
1139 1395 2.617538 TCTCCCTCCCTCCGGTCT 60.618 66.667 0.00 0.00 0.00 3.85
1241 1497 1.689352 CCATTTCCGCGTACACGTCC 61.689 60.000 4.92 0.00 42.22 4.79
1338 1597 1.216710 GTGAGTCCCTGCTTCCTCG 59.783 63.158 0.00 0.00 0.00 4.63
1347 1606 1.999071 CTGCTTCCTCGGACCTCTCG 61.999 65.000 0.00 0.00 0.00 4.04
1348 1607 1.749638 GCTTCCTCGGACCTCTCGA 60.750 63.158 0.00 0.00 35.24 4.04
1367 1626 3.585990 GGCCGATTGCGATGGTGG 61.586 66.667 0.00 0.00 42.61 4.61
1375 1634 3.531538 GATTGCGATGGTGGTTCTTCTA 58.468 45.455 0.00 0.00 0.00 2.10
1389 1648 1.470098 TCTTCTACGCGTGGTTAGGTC 59.530 52.381 24.59 0.00 0.00 3.85
1392 1651 3.340953 TACGCGTGGTTAGGTCGCC 62.341 63.158 24.59 0.00 45.85 5.54
1394 1653 2.508663 GCGTGGTTAGGTCGCCTC 60.509 66.667 1.46 0.00 43.41 4.70
1395 1654 2.183555 CGTGGTTAGGTCGCCTCC 59.816 66.667 1.46 0.01 34.61 4.30
1396 1655 2.582978 GTGGTTAGGTCGCCTCCC 59.417 66.667 1.46 4.98 34.61 4.30
1397 1656 1.988406 GTGGTTAGGTCGCCTCCCT 60.988 63.158 1.46 0.00 34.61 4.20
1398 1657 1.987855 TGGTTAGGTCGCCTCCCTG 60.988 63.158 1.46 0.00 34.61 4.45
1399 1658 2.187163 GTTAGGTCGCCTCCCTGC 59.813 66.667 1.46 0.00 34.61 4.85
1400 1659 2.038975 TTAGGTCGCCTCCCTGCT 59.961 61.111 1.46 0.00 34.61 4.24
1401 1660 1.612442 TTAGGTCGCCTCCCTGCTT 60.612 57.895 1.46 0.00 34.61 3.91
1402 1661 1.899437 TTAGGTCGCCTCCCTGCTTG 61.899 60.000 1.46 0.00 34.61 4.01
1403 1662 2.798445 TAGGTCGCCTCCCTGCTTGA 62.798 60.000 1.46 0.00 34.61 3.02
1404 1663 2.586792 GTCGCCTCCCTGCTTGAT 59.413 61.111 0.00 0.00 0.00 2.57
1405 1664 1.078143 GTCGCCTCCCTGCTTGATT 60.078 57.895 0.00 0.00 0.00 2.57
1406 1665 1.078214 TCGCCTCCCTGCTTGATTG 60.078 57.895 0.00 0.00 0.00 2.67
1407 1666 1.377725 CGCCTCCCTGCTTGATTGT 60.378 57.895 0.00 0.00 0.00 2.71
1408 1667 0.962356 CGCCTCCCTGCTTGATTGTT 60.962 55.000 0.00 0.00 0.00 2.83
1409 1668 1.260544 GCCTCCCTGCTTGATTGTTT 58.739 50.000 0.00 0.00 0.00 2.83
1410 1669 1.203287 GCCTCCCTGCTTGATTGTTTC 59.797 52.381 0.00 0.00 0.00 2.78
1411 1670 2.800250 CCTCCCTGCTTGATTGTTTCT 58.200 47.619 0.00 0.00 0.00 2.52
1412 1671 3.160269 CCTCCCTGCTTGATTGTTTCTT 58.840 45.455 0.00 0.00 0.00 2.52
1413 1672 3.575687 CCTCCCTGCTTGATTGTTTCTTT 59.424 43.478 0.00 0.00 0.00 2.52
1414 1673 4.039609 CCTCCCTGCTTGATTGTTTCTTTT 59.960 41.667 0.00 0.00 0.00 2.27
1415 1674 5.453762 CCTCCCTGCTTGATTGTTTCTTTTT 60.454 40.000 0.00 0.00 0.00 1.94
1416 1675 5.358922 TCCCTGCTTGATTGTTTCTTTTTG 58.641 37.500 0.00 0.00 0.00 2.44
1417 1676 4.024641 CCCTGCTTGATTGTTTCTTTTTGC 60.025 41.667 0.00 0.00 0.00 3.68
1418 1677 4.318263 CCTGCTTGATTGTTTCTTTTTGCG 60.318 41.667 0.00 0.00 0.00 4.85
1419 1678 3.555139 TGCTTGATTGTTTCTTTTTGCGG 59.445 39.130 0.00 0.00 0.00 5.69
1420 1679 3.059665 GCTTGATTGTTTCTTTTTGCGGG 60.060 43.478 0.00 0.00 0.00 6.13
1421 1680 3.104843 TGATTGTTTCTTTTTGCGGGG 57.895 42.857 0.00 0.00 0.00 5.73
1422 1681 2.224161 TGATTGTTTCTTTTTGCGGGGG 60.224 45.455 0.00 0.00 0.00 5.40
1423 1682 1.196012 TTGTTTCTTTTTGCGGGGGT 58.804 45.000 0.00 0.00 0.00 4.95
1424 1683 2.068834 TGTTTCTTTTTGCGGGGGTA 57.931 45.000 0.00 0.00 0.00 3.69
1454 1713 1.250840 TTGCTAGCTCGCCTCTGTCA 61.251 55.000 17.23 0.00 0.00 3.58
1456 1715 1.063327 CTAGCTCGCCTCTGTCACG 59.937 63.158 0.00 0.00 0.00 4.35
1476 1735 4.114997 GCCGGTCGCAATGGTTGG 62.115 66.667 1.90 0.00 37.47 3.77
1482 1741 1.377987 TCGCAATGGTTGGTAGCCC 60.378 57.895 0.00 0.00 0.00 5.19
1502 1762 0.107410 AGTGCCGTGTTCTTGGTTCA 60.107 50.000 0.00 0.00 0.00 3.18
1503 1763 0.028902 GTGCCGTGTTCTTGGTTCAC 59.971 55.000 0.00 0.00 0.00 3.18
1507 1781 2.159296 GCCGTGTTCTTGGTTCACTTTT 60.159 45.455 0.00 0.00 0.00 2.27
1521 1796 5.523552 GGTTCACTTTTTGGGATTCTTTGTG 59.476 40.000 0.00 0.00 0.00 3.33
1660 1935 2.486191 CGGATAAGGCTCCATCAAGCTT 60.486 50.000 10.25 0.00 42.13 3.74
1750 2025 3.306472 TTGTTTGCTTCCCCTTACTGT 57.694 42.857 0.00 0.00 0.00 3.55
1809 2084 7.172875 GTGGCTAGTTCGATCTGTCTATAAGTA 59.827 40.741 6.25 0.00 0.00 2.24
1831 2107 7.280356 AGTACAATTTTGTCTAGAGTGTGGTT 58.720 34.615 0.00 0.00 42.35 3.67
1838 2114 5.811399 TGTCTAGAGTGTGGTTTTGTTTG 57.189 39.130 0.00 0.00 0.00 2.93
1923 2203 6.148811 CCCCAGTGTTGTACTACATGTAAAAG 59.851 42.308 13.21 0.00 37.60 2.27
1925 2205 6.348213 CCAGTGTTGTACTACATGTAAAAGGC 60.348 42.308 13.21 0.00 37.60 4.35
1927 2207 5.005094 TGTTGTACTACATGTAAAAGGCCC 58.995 41.667 7.06 0.00 29.62 5.80
1928 2208 4.224991 TGTACTACATGTAAAAGGCCCC 57.775 45.455 7.06 0.00 32.25 5.80
1930 2210 3.366052 ACTACATGTAAAAGGCCCCAG 57.634 47.619 7.06 0.00 0.00 4.45
1931 2211 2.647802 ACTACATGTAAAAGGCCCCAGT 59.352 45.455 7.06 0.00 0.00 4.00
1933 2213 1.146982 ACATGTAAAAGGCCCCAGTGT 59.853 47.619 0.00 0.00 0.00 3.55
1934 2214 2.247358 CATGTAAAAGGCCCCAGTGTT 58.753 47.619 0.00 0.00 0.00 3.32
1952 2232 6.091305 CCAGTGTTGTATCAGTTGTAGATGTG 59.909 42.308 0.00 0.00 0.00 3.21
1991 2271 1.149101 TGGAAAGGGAGGCAGTTTCT 58.851 50.000 0.00 0.00 31.96 2.52
2069 2352 8.358148 CCTCGAGTTGTAGCTATTCCTTTATTA 58.642 37.037 12.31 0.00 0.00 0.98
2232 2515 6.419484 TGGTCTAAAGTGTGAGAGATTTGA 57.581 37.500 0.00 0.00 0.00 2.69
2235 2518 7.155328 GGTCTAAAGTGTGAGAGATTTGAAGA 58.845 38.462 0.00 0.00 0.00 2.87
2307 2590 3.106407 GTGTCCGTCAGCGTGCTC 61.106 66.667 0.00 0.00 36.15 4.26
2436 2719 0.899717 TTGAATCCTTGTGCCCCTGC 60.900 55.000 0.00 0.00 38.26 4.85
2512 2795 6.813152 CGGAAATTCCTGTAAGCAAAAATGAT 59.187 34.615 10.64 0.00 33.30 2.45
2535 2818 6.875948 TGAATTTTCATATACGGGTGATGG 57.124 37.500 0.00 0.00 31.01 3.51
2565 2848 6.072728 TGTTAACACACTGAATCAATGCCTAC 60.073 38.462 3.59 0.00 0.00 3.18
2567 2850 2.352651 CACACTGAATCAATGCCTACCG 59.647 50.000 0.00 0.00 0.00 4.02
2954 3237 7.625553 CAACTACACTAGAGATTTGCATAAGC 58.374 38.462 0.00 0.00 42.57 3.09
3034 3317 9.121658 GGTTTAGCTAAAAGCCTAATTAGACAT 57.878 33.333 20.22 0.00 43.77 3.06
3235 3538 1.808945 CGCCTTCTGATGCTTGTTTCT 59.191 47.619 0.00 0.00 0.00 2.52
3236 3539 2.227388 CGCCTTCTGATGCTTGTTTCTT 59.773 45.455 0.00 0.00 0.00 2.52
3237 3540 3.304928 CGCCTTCTGATGCTTGTTTCTTT 60.305 43.478 0.00 0.00 0.00 2.52
3238 3541 4.625028 GCCTTCTGATGCTTGTTTCTTTT 58.375 39.130 0.00 0.00 0.00 2.27
3239 3542 4.446719 GCCTTCTGATGCTTGTTTCTTTTG 59.553 41.667 0.00 0.00 0.00 2.44
3241 3544 5.452356 CCTTCTGATGCTTGTTTCTTTTGGT 60.452 40.000 0.00 0.00 0.00 3.67
3242 3545 5.596836 TCTGATGCTTGTTTCTTTTGGTT 57.403 34.783 0.00 0.00 0.00 3.67
3243 3546 5.591099 TCTGATGCTTGTTTCTTTTGGTTC 58.409 37.500 0.00 0.00 0.00 3.62
3245 3548 5.916318 TGATGCTTGTTTCTTTTGGTTCAT 58.084 33.333 0.00 0.00 0.00 2.57
3246 3549 7.014134 TCTGATGCTTGTTTCTTTTGGTTCATA 59.986 33.333 0.00 0.00 0.00 2.15
3247 3550 7.147312 TGATGCTTGTTTCTTTTGGTTCATAG 58.853 34.615 0.00 0.00 0.00 2.23
3248 3551 5.841810 TGCTTGTTTCTTTTGGTTCATAGG 58.158 37.500 0.00 0.00 0.00 2.57
3249 3552 5.596361 TGCTTGTTTCTTTTGGTTCATAGGA 59.404 36.000 0.00 0.00 0.00 2.94
3252 3555 7.970614 GCTTGTTTCTTTTGGTTCATAGGATAG 59.029 37.037 0.00 0.00 0.00 2.08
3253 3556 7.938140 TGTTTCTTTTGGTTCATAGGATAGG 57.062 36.000 0.00 0.00 0.00 2.57
3254 3557 7.695055 TGTTTCTTTTGGTTCATAGGATAGGA 58.305 34.615 0.00 0.00 0.00 2.94
3255 3558 8.336235 TGTTTCTTTTGGTTCATAGGATAGGAT 58.664 33.333 0.00 0.00 28.27 3.24
3256 3559 9.190317 GTTTCTTTTGGTTCATAGGATAGGATT 57.810 33.333 0.00 0.00 28.27 3.01
3264 3567 9.439461 TGGTTCATAGGATAGGATTATCATAGG 57.561 37.037 0.00 0.00 36.37 2.57
3283 3586 9.621239 ATCATAGGAATAGGAATCTTGTAGGAA 57.379 33.333 0.00 0.00 0.00 3.36
3284 3587 9.447279 TCATAGGAATAGGAATCTTGTAGGAAA 57.553 33.333 0.00 0.00 0.00 3.13
3287 3590 8.337118 AGGAATAGGAATCTTGTAGGAAATGA 57.663 34.615 0.00 0.00 0.00 2.57
3288 3591 8.435982 AGGAATAGGAATCTTGTAGGAAATGAG 58.564 37.037 0.00 0.00 0.00 2.90
3289 3592 8.432805 GGAATAGGAATCTTGTAGGAAATGAGA 58.567 37.037 0.00 0.00 0.00 3.27
3291 3594 9.790344 AATAGGAATCTTGTAGGAAATGAGATG 57.210 33.333 0.00 0.00 0.00 2.90
3292 3595 7.443302 AGGAATCTTGTAGGAAATGAGATGA 57.557 36.000 0.00 0.00 0.00 2.92
3293 3596 7.278875 AGGAATCTTGTAGGAAATGAGATGAC 58.721 38.462 0.00 0.00 0.00 3.06
3294 3597 7.050377 GGAATCTTGTAGGAAATGAGATGACA 58.950 38.462 0.00 0.00 0.00 3.58
3295 3598 7.718753 GGAATCTTGTAGGAAATGAGATGACAT 59.281 37.037 0.00 0.00 0.00 3.06
3296 3599 8.447924 AATCTTGTAGGAAATGAGATGACATG 57.552 34.615 0.00 0.00 0.00 3.21
3297 3600 6.950842 TCTTGTAGGAAATGAGATGACATGT 58.049 36.000 0.00 0.00 0.00 3.21
3298 3601 8.078060 TCTTGTAGGAAATGAGATGACATGTA 57.922 34.615 0.00 0.00 0.00 2.29
3299 3602 8.708378 TCTTGTAGGAAATGAGATGACATGTAT 58.292 33.333 0.00 0.00 0.00 2.29
3300 3603 8.893219 TTGTAGGAAATGAGATGACATGTATC 57.107 34.615 0.00 2.87 0.00 2.24
3301 3604 8.255111 TGTAGGAAATGAGATGACATGTATCT 57.745 34.615 14.05 14.05 37.59 1.98
3302 3605 8.363390 TGTAGGAAATGAGATGACATGTATCTC 58.637 37.037 24.04 24.04 46.82 2.75
3312 3615 9.368674 GAGATGACATGTATCTCAAATCCTATG 57.631 37.037 24.95 0.00 46.22 2.23
3313 3616 9.097946 AGATGACATGTATCTCAAATCCTATGA 57.902 33.333 0.00 0.00 29.05 2.15
3314 3617 9.368674 GATGACATGTATCTCAAATCCTATGAG 57.631 37.037 0.00 0.00 44.53 2.90
3315 3618 8.255111 TGACATGTATCTCAAATCCTATGAGT 57.745 34.615 0.00 0.00 43.77 3.41
3316 3619 9.367160 TGACATGTATCTCAAATCCTATGAGTA 57.633 33.333 0.00 0.00 43.77 2.59
3317 3620 9.853555 GACATGTATCTCAAATCCTATGAGTAG 57.146 37.037 0.00 0.00 43.77 2.57
3334 3637 9.703892 CTATGAGTAGGAATAGGAAACAAGATG 57.296 37.037 0.00 0.00 0.00 2.90
3335 3638 7.496346 TGAGTAGGAATAGGAAACAAGATGT 57.504 36.000 0.00 0.00 0.00 3.06
3336 3639 7.556844 TGAGTAGGAATAGGAAACAAGATGTC 58.443 38.462 0.00 0.00 0.00 3.06
3337 3640 7.180229 TGAGTAGGAATAGGAAACAAGATGTCA 59.820 37.037 0.00 0.00 0.00 3.58
3338 3641 8.095452 AGTAGGAATAGGAAACAAGATGTCAT 57.905 34.615 0.00 0.00 0.00 3.06
3339 3642 8.552296 AGTAGGAATAGGAAACAAGATGTCATT 58.448 33.333 0.00 0.00 0.00 2.57
3340 3643 9.178758 GTAGGAATAGGAAACAAGATGTCATTT 57.821 33.333 0.00 0.00 0.00 2.32
3341 3644 8.059798 AGGAATAGGAAACAAGATGTCATTTG 57.940 34.615 0.00 0.00 0.00 2.32
3342 3645 7.123247 AGGAATAGGAAACAAGATGTCATTTGG 59.877 37.037 10.50 0.00 0.00 3.28
3343 3646 7.093771 GGAATAGGAAACAAGATGTCATTTGGT 60.094 37.037 10.50 3.75 0.00 3.67
3344 3647 7.781324 ATAGGAAACAAGATGTCATTTGGTT 57.219 32.000 9.41 9.41 36.95 3.67
3345 3648 5.846203 AGGAAACAAGATGTCATTTGGTTG 58.154 37.500 12.70 6.32 34.55 3.77
3346 3649 5.598005 AGGAAACAAGATGTCATTTGGTTGA 59.402 36.000 12.70 0.00 34.55 3.18
3347 3650 5.691754 GGAAACAAGATGTCATTTGGTTGAC 59.308 40.000 12.70 0.00 45.05 3.18
3363 3666 5.984233 GGTTGACACCAAAGGAATTTTTC 57.016 39.130 0.00 0.00 43.61 2.29
3364 3667 4.814234 GGTTGACACCAAAGGAATTTTTCC 59.186 41.667 0.00 0.00 45.80 3.13
3365 3668 5.627968 GGTTGACACCAAAGGAATTTTTCCA 60.628 40.000 8.87 0.00 46.88 3.53
3366 3669 6.911529 GGTTGACACCAAAGGAATTTTTCCAT 60.912 38.462 8.87 0.00 46.88 3.41
3367 3670 8.334633 GGTTGACACCAAAGGAATTTTTCCATT 61.335 37.037 8.87 0.31 46.88 3.16
3378 3681 6.765915 GAATTTTTCCATTGAGTCTAGGCT 57.234 37.500 0.00 0.00 0.00 4.58
3379 3682 6.765915 AATTTTTCCATTGAGTCTAGGCTC 57.234 37.500 17.74 17.74 36.12 4.70
3380 3683 5.505181 TTTTTCCATTGAGTCTAGGCTCT 57.495 39.130 24.20 2.95 36.51 4.09
3381 3684 5.505181 TTTTCCATTGAGTCTAGGCTCTT 57.495 39.130 24.20 9.92 36.51 2.85
3382 3685 5.505181 TTTCCATTGAGTCTAGGCTCTTT 57.495 39.130 24.20 9.56 36.51 2.52
3383 3686 5.505181 TTCCATTGAGTCTAGGCTCTTTT 57.495 39.130 24.20 7.12 36.51 2.27
3384 3687 5.505181 TCCATTGAGTCTAGGCTCTTTTT 57.495 39.130 24.20 4.72 36.51 1.94
3408 3711 9.540538 TTTTATTTTCCTATGAAATGTGGAGGA 57.459 29.630 0.00 0.00 40.08 3.71
3409 3712 9.713684 TTTATTTTCCTATGAAATGTGGAGGAT 57.286 29.630 0.00 0.00 40.08 3.24
3411 3714 8.930846 ATTTTCCTATGAAATGTGGAGGATAG 57.069 34.615 0.00 0.00 40.08 2.08
3412 3715 6.439636 TTCCTATGAAATGTGGAGGATAGG 57.560 41.667 0.00 0.00 36.22 2.57
3413 3716 5.726560 TCCTATGAAATGTGGAGGATAGGA 58.273 41.667 0.00 0.00 39.29 2.94
3414 3717 6.150332 TCCTATGAAATGTGGAGGATAGGAA 58.850 40.000 0.00 0.00 38.86 3.36
3415 3718 6.043243 TCCTATGAAATGTGGAGGATAGGAAC 59.957 42.308 0.00 0.00 38.86 3.62
3416 3719 4.503714 TGAAATGTGGAGGATAGGAACC 57.496 45.455 0.00 0.00 0.00 3.62
3417 3720 3.849574 TGAAATGTGGAGGATAGGAACCA 59.150 43.478 0.00 0.00 0.00 3.67
3418 3721 4.290985 TGAAATGTGGAGGATAGGAACCAA 59.709 41.667 0.00 0.00 34.11 3.67
3419 3722 5.044179 TGAAATGTGGAGGATAGGAACCAAT 60.044 40.000 0.00 0.00 34.11 3.16
3420 3723 4.713792 ATGTGGAGGATAGGAACCAATC 57.286 45.455 0.00 0.00 34.11 2.67
3458 3761 6.396829 GAATCCATTCCTATGAACCAAAGG 57.603 41.667 0.00 0.00 33.37 3.11
3459 3762 4.249638 TCCATTCCTATGAACCAAAGGG 57.750 45.455 0.00 0.00 35.37 3.95
3460 3763 2.695147 CCATTCCTATGAACCAAAGGGC 59.305 50.000 0.00 0.00 33.50 5.19
3461 3764 3.628257 CCATTCCTATGAACCAAAGGGCT 60.628 47.826 0.00 0.00 33.50 5.19
3462 3765 3.366052 TTCCTATGAACCAAAGGGCTC 57.634 47.619 0.00 0.00 37.90 4.70
3463 3766 2.562296 TCCTATGAACCAAAGGGCTCT 58.438 47.619 0.00 0.00 37.90 4.09
3464 3767 3.731431 TCCTATGAACCAAAGGGCTCTA 58.269 45.455 0.00 0.00 37.90 2.43
3465 3768 4.108570 TCCTATGAACCAAAGGGCTCTAA 58.891 43.478 0.00 0.00 37.90 2.10
3466 3769 4.538490 TCCTATGAACCAAAGGGCTCTAAA 59.462 41.667 0.00 0.00 37.90 1.85
3467 3770 4.884164 CCTATGAACCAAAGGGCTCTAAAG 59.116 45.833 0.00 0.00 37.90 1.85
3468 3771 3.154827 TGAACCAAAGGGCTCTAAAGG 57.845 47.619 0.00 0.00 37.90 3.11
3469 3772 2.714250 TGAACCAAAGGGCTCTAAAGGA 59.286 45.455 5.94 0.00 37.90 3.36
3470 3773 3.139397 TGAACCAAAGGGCTCTAAAGGAA 59.861 43.478 5.94 0.00 37.90 3.36
3471 3774 3.895704 ACCAAAGGGCTCTAAAGGAAA 57.104 42.857 5.94 0.00 37.90 3.13
3472 3775 4.193240 ACCAAAGGGCTCTAAAGGAAAA 57.807 40.909 5.94 0.00 37.90 2.29
3473 3776 4.552674 ACCAAAGGGCTCTAAAGGAAAAA 58.447 39.130 5.94 0.00 37.90 1.94
3508 3811 9.713684 AGAATCCTATCCTCTAGAATTCCTATG 57.286 37.037 0.65 0.00 0.00 2.23
3509 3812 9.707957 GAATCCTATCCTCTAGAATTCCTATGA 57.292 37.037 0.65 0.00 0.00 2.15
3516 3819 8.805145 TCCTCTAGAATTCCTATGAAATTCCT 57.195 34.615 0.65 0.00 33.32 3.36
3517 3820 8.875168 TCCTCTAGAATTCCTATGAAATTCCTC 58.125 37.037 0.65 0.00 33.32 3.71
3518 3821 8.879227 CCTCTAGAATTCCTATGAAATTCCTCT 58.121 37.037 0.65 0.00 33.32 3.69
3523 3826 9.634021 AGAATTCCTATGAAATTCCTCTAAACC 57.366 33.333 0.65 0.00 33.32 3.27
3524 3827 9.408648 GAATTCCTATGAAATTCCTCTAAACCA 57.591 33.333 0.00 0.00 33.32 3.67
3525 3828 9.768215 AATTCCTATGAAATTCCTCTAAACCAA 57.232 29.630 0.00 0.00 33.32 3.67
3526 3829 9.768215 ATTCCTATGAAATTCCTCTAAACCAAA 57.232 29.630 0.00 0.00 33.32 3.28
3527 3830 8.807948 TCCTATGAAATTCCTCTAAACCAAAG 57.192 34.615 0.00 0.00 0.00 2.77
3528 3831 7.834181 TCCTATGAAATTCCTCTAAACCAAAGG 59.166 37.037 0.00 0.00 0.00 3.11
3529 3832 7.834181 CCTATGAAATTCCTCTAAACCAAAGGA 59.166 37.037 0.00 0.00 37.42 3.36
3530 3833 7.709149 ATGAAATTCCTCTAAACCAAAGGAG 57.291 36.000 0.00 0.00 40.21 3.69
3531 3834 6.010219 TGAAATTCCTCTAAACCAAAGGAGG 58.990 40.000 0.00 0.00 44.69 4.30
3532 3835 5.600669 AATTCCTCTAAACCAAAGGAGGT 57.399 39.130 7.57 0.00 45.91 3.85
3533 3836 6.713731 AATTCCTCTAAACCAAAGGAGGTA 57.286 37.500 7.57 0.00 42.25 3.08
3748 4051 8.504812 TGTGCATTGCTCTTATATCTTTTGTA 57.495 30.769 10.49 0.00 0.00 2.41
3864 4170 5.471456 ACCTGTTTGACTTGTGATTCTGATC 59.529 40.000 0.00 0.00 0.00 2.92
4158 4464 1.895020 TATTGGGCTTCGGTCAGCGT 61.895 55.000 0.00 0.00 41.12 5.07
4179 4485 5.107298 GCGTCTTGAAATAGCCATAGATGTC 60.107 44.000 0.00 0.00 0.00 3.06
4274 4580 8.958119 ATAGAACAGTCAAGTGAAACACTAAA 57.042 30.769 4.84 0.00 44.62 1.85
4403 4710 4.087510 TCGTGGTACTTGTCAGTTATCG 57.912 45.455 0.00 0.00 34.06 2.92
4481 4788 1.002366 GTACATGTGCTCCAGCTTCG 58.998 55.000 9.11 0.00 42.66 3.79
4501 4808 2.554142 GTATTAAGCGGGCCTAACGTT 58.446 47.619 5.88 5.88 0.00 3.99
4571 4879 4.637534 TCACAAGAATTTGAGGCTATGCTC 59.362 41.667 0.00 0.00 37.73 4.26
4579 4887 1.908619 TGAGGCTATGCTCAACAAGGA 59.091 47.619 0.00 0.00 0.00 3.36
4646 4955 2.885135 TCACAAGGATCAGCCATGTT 57.115 45.000 0.00 0.00 45.87 2.71
4648 4957 4.508551 TCACAAGGATCAGCCATGTTAT 57.491 40.909 0.00 0.00 45.87 1.89
4650 4959 5.263599 TCACAAGGATCAGCCATGTTATTT 58.736 37.500 0.00 0.00 45.87 1.40
4651 4960 5.357878 TCACAAGGATCAGCCATGTTATTTC 59.642 40.000 0.00 0.00 45.87 2.17
4652 4961 5.359009 CACAAGGATCAGCCATGTTATTTCT 59.641 40.000 0.00 0.00 45.87 2.52
4767 5083 6.718388 TGCTCTTTAGTATTTTGATGCATCG 58.282 36.000 21.34 3.07 0.00 3.84
5183 5499 8.204836 GGTATGTCTTTGCTTTCCTCTCTTATA 58.795 37.037 0.00 0.00 0.00 0.98
5322 5638 6.884295 CCATGAAAGGTAGATCAAACCACTTA 59.116 38.462 16.93 3.75 39.64 2.24
5326 5642 5.941555 AGGTAGATCAAACCACTTAGGAG 57.058 43.478 16.93 0.00 41.22 3.69
5466 5784 1.152398 GGATGGGATGGGCAAGCAT 60.152 57.895 0.00 0.00 0.00 3.79
5693 6014 3.507233 TGTGTGCCTTCCTTTGATGATTC 59.493 43.478 0.00 0.00 0.00 2.52
5735 6056 8.943002 GTTACAAGTTAAACCATACACTATGCT 58.057 33.333 0.00 0.00 34.85 3.79
5882 6372 7.256475 CCCATCTATTGCCACTTAGATTCTACT 60.256 40.741 0.00 0.00 33.84 2.57
5883 6373 7.816995 CCATCTATTGCCACTTAGATTCTACTC 59.183 40.741 0.00 0.00 33.84 2.59
5884 6374 7.291411 TCTATTGCCACTTAGATTCTACTCC 57.709 40.000 0.00 0.00 0.00 3.85
5885 6375 4.755266 TTGCCACTTAGATTCTACTCCC 57.245 45.455 0.00 0.00 0.00 4.30
5886 6376 3.995636 TGCCACTTAGATTCTACTCCCT 58.004 45.455 0.00 0.00 0.00 4.20
5887 6377 3.961408 TGCCACTTAGATTCTACTCCCTC 59.039 47.826 0.00 0.00 0.00 4.30
5888 6378 3.322541 GCCACTTAGATTCTACTCCCTCC 59.677 52.174 0.00 0.00 0.00 4.30
5890 6380 4.208746 CACTTAGATTCTACTCCCTCCGT 58.791 47.826 0.00 0.00 0.00 4.69
5891 6381 4.645588 CACTTAGATTCTACTCCCTCCGTT 59.354 45.833 0.00 0.00 0.00 4.44
5892 6382 4.888823 ACTTAGATTCTACTCCCTCCGTTC 59.111 45.833 0.00 0.00 0.00 3.95
5894 6384 2.245287 AGATTCTACTCCCTCCGTTCCT 59.755 50.000 0.00 0.00 0.00 3.36
5895 6385 3.462579 AGATTCTACTCCCTCCGTTCCTA 59.537 47.826 0.00 0.00 0.00 2.94
5896 6386 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
5897 6387 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
5898 6388 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
5900 6390 5.136105 TCTACTCCCTCCGTTCCTAAATAC 58.864 45.833 0.00 0.00 0.00 1.89
5901 6391 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
5903 6393 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
5904 6394 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
5905 6395 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
5906 6396 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
5907 6397 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
5908 6398 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
5909 6399 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
5910 6400 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
5911 6401 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
5912 6402 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
5913 6403 8.248945 CCGTTCCTAAATACTTGTCTTTCTAGA 58.751 37.037 0.00 0.00 0.00 2.43
5914 6404 9.291664 CGTTCCTAAATACTTGTCTTTCTAGAG 57.708 37.037 0.00 0.00 0.00 2.43
5924 6414 8.964476 ACTTGTCTTTCTAGAGATTTCAACAA 57.036 30.769 0.00 0.00 0.00 2.83
5925 6415 9.396022 ACTTGTCTTTCTAGAGATTTCAACAAA 57.604 29.630 0.00 0.00 0.00 2.83
5928 6418 9.559732 TGTCTTTCTAGAGATTTCAACAAATGA 57.440 29.630 0.00 0.00 31.94 2.57
5929 6419 9.818796 GTCTTTCTAGAGATTTCAACAAATGAC 57.181 33.333 0.00 0.00 37.92 3.06
5930 6420 9.784531 TCTTTCTAGAGATTTCAACAAATGACT 57.215 29.630 0.00 0.00 37.92 3.41
5933 6423 9.996554 TTCTAGAGATTTCAACAAATGACTACA 57.003 29.630 0.00 0.00 37.92 2.74
5937 6427 8.873830 AGAGATTTCAACAAATGACTACATACG 58.126 33.333 0.00 0.00 37.92 3.06
5938 6428 8.771920 AGATTTCAACAAATGACTACATACGA 57.228 30.769 0.00 0.00 37.92 3.43
5939 6429 9.214957 AGATTTCAACAAATGACTACATACGAA 57.785 29.630 0.00 0.00 37.92 3.85
5940 6430 9.478019 GATTTCAACAAATGACTACATACGAAG 57.522 33.333 0.00 0.00 37.92 3.79
5941 6431 6.403333 TCAACAAATGACTACATACGAAGC 57.597 37.500 0.00 0.00 35.50 3.86
5942 6432 5.929415 TCAACAAATGACTACATACGAAGCA 59.071 36.000 0.00 0.00 35.50 3.91
5943 6433 6.425417 TCAACAAATGACTACATACGAAGCAA 59.575 34.615 0.00 0.00 35.50 3.91
5944 6434 6.795098 ACAAATGACTACATACGAAGCAAA 57.205 33.333 0.00 0.00 35.50 3.68
5945 6435 7.197071 ACAAATGACTACATACGAAGCAAAA 57.803 32.000 0.00 0.00 35.50 2.44
5946 6436 7.816640 ACAAATGACTACATACGAAGCAAAAT 58.183 30.769 0.00 0.00 35.50 1.82
5947 6437 7.750458 ACAAATGACTACATACGAAGCAAAATG 59.250 33.333 0.00 0.00 35.50 2.32
5948 6438 7.609760 AATGACTACATACGAAGCAAAATGA 57.390 32.000 0.00 0.00 35.50 2.57
5949 6439 6.647212 TGACTACATACGAAGCAAAATGAG 57.353 37.500 0.00 0.00 0.00 2.90
5950 6440 6.163476 TGACTACATACGAAGCAAAATGAGT 58.837 36.000 0.00 0.00 0.00 3.41
5951 6441 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
5952 6442 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
5953 6443 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
5954 6444 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
5955 6445 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
5956 6446 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
5957 6447 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
5958 6448 6.992063 ACGAAGCAAAATGAGTGAATCTAT 57.008 33.333 0.00 0.00 0.00 1.98
5959 6449 9.764363 ATACGAAGCAAAATGAGTGAATCTATA 57.236 29.630 0.00 0.00 0.00 1.31
5960 6450 7.910304 ACGAAGCAAAATGAGTGAATCTATAC 58.090 34.615 0.00 0.00 0.00 1.47
5961 6451 7.766278 ACGAAGCAAAATGAGTGAATCTATACT 59.234 33.333 0.00 0.00 0.00 2.12
5962 6452 8.272176 CGAAGCAAAATGAGTGAATCTATACTC 58.728 37.037 0.00 0.00 42.77 2.59
5963 6453 9.323985 GAAGCAAAATGAGTGAATCTATACTCT 57.676 33.333 0.00 0.00 42.86 3.24
5998 6488 4.438148 CATACATCCGTATGTTGTGTCCA 58.562 43.478 0.00 0.00 46.70 4.02
5999 6489 2.695359 ACATCCGTATGTTGTGTCCAC 58.305 47.619 0.00 0.00 44.07 4.02
6000 6490 2.301870 ACATCCGTATGTTGTGTCCACT 59.698 45.455 0.00 0.00 44.07 4.00
6001 6491 3.244422 ACATCCGTATGTTGTGTCCACTT 60.244 43.478 0.00 0.00 44.07 3.16
6002 6492 2.761559 TCCGTATGTTGTGTCCACTTG 58.238 47.619 0.00 0.00 0.00 3.16
6003 6493 2.365941 TCCGTATGTTGTGTCCACTTGA 59.634 45.455 0.00 0.00 0.00 3.02
6004 6494 3.135225 CCGTATGTTGTGTCCACTTGAA 58.865 45.455 0.00 0.00 0.00 2.69
6005 6495 3.562141 CCGTATGTTGTGTCCACTTGAAA 59.438 43.478 0.00 0.00 0.00 2.69
6006 6496 4.215399 CCGTATGTTGTGTCCACTTGAAAT 59.785 41.667 0.00 0.00 0.00 2.17
6007 6497 5.146460 CGTATGTTGTGTCCACTTGAAATG 58.854 41.667 0.00 0.00 0.00 2.32
6008 6498 5.277779 CGTATGTTGTGTCCACTTGAAATGT 60.278 40.000 0.00 0.00 0.00 2.71
6009 6499 4.630894 TGTTGTGTCCACTTGAAATGTC 57.369 40.909 0.00 0.00 0.00 3.06
6010 6500 4.269183 TGTTGTGTCCACTTGAAATGTCT 58.731 39.130 0.00 0.00 0.00 3.41
6011 6501 5.432645 TGTTGTGTCCACTTGAAATGTCTA 58.567 37.500 0.00 0.00 0.00 2.59
6012 6502 5.527214 TGTTGTGTCCACTTGAAATGTCTAG 59.473 40.000 0.00 0.00 33.37 2.43
6013 6503 5.545063 TGTGTCCACTTGAAATGTCTAGA 57.455 39.130 0.99 0.00 31.79 2.43
6014 6504 5.924356 TGTGTCCACTTGAAATGTCTAGAA 58.076 37.500 0.99 0.00 31.79 2.10
6015 6505 6.353323 TGTGTCCACTTGAAATGTCTAGAAA 58.647 36.000 0.99 0.00 31.79 2.52
6016 6506 6.483307 TGTGTCCACTTGAAATGTCTAGAAAG 59.517 38.462 0.99 0.00 31.79 2.62
6017 6507 6.706270 GTGTCCACTTGAAATGTCTAGAAAGA 59.294 38.462 0.99 0.00 31.79 2.52
6033 6523 8.263940 TCTAGAAAGACAAATATTTGGGAACG 57.736 34.615 27.43 11.14 42.34 3.95
6034 6524 6.267496 AGAAAGACAAATATTTGGGAACGG 57.733 37.500 27.43 5.66 42.34 4.44
6035 6525 6.007703 AGAAAGACAAATATTTGGGAACGGA 58.992 36.000 27.43 0.00 42.34 4.69
6036 6526 5.897377 AAGACAAATATTTGGGAACGGAG 57.103 39.130 27.43 4.34 42.34 4.63
6037 6527 4.270008 AGACAAATATTTGGGAACGGAGG 58.730 43.478 27.43 3.68 42.34 4.30
6038 6528 3.361786 ACAAATATTTGGGAACGGAGGG 58.638 45.455 27.43 3.22 42.34 4.30
6039 6529 3.010808 ACAAATATTTGGGAACGGAGGGA 59.989 43.478 27.43 0.00 42.34 4.20
6040 6530 3.577805 AATATTTGGGAACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
6041 6531 1.961133 TATTTGGGAACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
6042 6532 1.961133 ATTTGGGAACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
6043 6533 0.978907 TTTGGGAACGGAGGGAGTAC 59.021 55.000 0.00 0.00 0.00 2.73
6044 6534 0.178926 TTGGGAACGGAGGGAGTACA 60.179 55.000 0.00 0.00 0.00 2.90
6045 6535 0.178926 TGGGAACGGAGGGAGTACAA 60.179 55.000 0.00 0.00 0.00 2.41
6046 6536 0.535797 GGGAACGGAGGGAGTACAAG 59.464 60.000 0.00 0.00 0.00 3.16
6047 6537 0.108281 GGAACGGAGGGAGTACAAGC 60.108 60.000 0.00 0.00 0.00 4.01
6048 6538 0.108281 GAACGGAGGGAGTACAAGCC 60.108 60.000 0.00 0.00 0.00 4.35
6049 6539 0.834687 AACGGAGGGAGTACAAGCCA 60.835 55.000 0.00 0.00 0.00 4.75
6050 6540 0.617820 ACGGAGGGAGTACAAGCCAT 60.618 55.000 0.00 0.00 0.00 4.40
6051 6541 0.105039 CGGAGGGAGTACAAGCCATC 59.895 60.000 0.00 0.49 34.39 3.51
6052 6542 1.501582 GGAGGGAGTACAAGCCATCT 58.498 55.000 11.91 0.00 35.44 2.90
6053 6543 2.679082 GGAGGGAGTACAAGCCATCTA 58.321 52.381 11.91 0.00 35.44 1.98
6054 6544 3.039011 GGAGGGAGTACAAGCCATCTAA 58.961 50.000 11.91 0.00 35.44 2.10
6055 6545 3.070302 GGAGGGAGTACAAGCCATCTAAG 59.930 52.174 11.91 0.00 35.44 2.18
6056 6546 3.041946 AGGGAGTACAAGCCATCTAAGG 58.958 50.000 0.00 0.00 0.00 2.69
6140 6630 1.134818 TGGATCCGATGTTGACCGAAG 60.135 52.381 7.39 0.00 0.00 3.79
6310 6800 7.394816 CAGAAGGGTCTCTTTAAACCATCTTA 58.605 38.462 0.00 0.00 37.28 2.10
6330 6820 3.508845 ACACTGGGTTATTGACTGCTT 57.491 42.857 0.00 0.00 0.00 3.91
6434 6926 3.189287 GCTGAAATCTGTACAGGGTTGTG 59.811 47.826 22.48 10.42 38.23 3.33
6505 6997 2.095768 CGATTTGATGCACGTTGACCTT 60.096 45.455 0.00 0.00 0.00 3.50
6509 7001 2.503331 TGATGCACGTTGACCTTGAAT 58.497 42.857 0.00 0.00 0.00 2.57
6535 7027 1.267121 ATTCCGTGTAGAGGCACTGT 58.733 50.000 0.00 0.00 41.55 3.55
6536 7028 1.045407 TTCCGTGTAGAGGCACTGTT 58.955 50.000 0.00 0.00 41.55 3.16
6537 7029 0.601558 TCCGTGTAGAGGCACTGTTC 59.398 55.000 0.00 0.00 41.55 3.18
6538 7030 0.317160 CCGTGTAGAGGCACTGTTCA 59.683 55.000 0.00 0.00 41.55 3.18
6539 7031 1.670087 CCGTGTAGAGGCACTGTTCAG 60.670 57.143 0.00 0.00 41.55 3.02
6540 7032 1.000163 CGTGTAGAGGCACTGTTCAGT 60.000 52.381 0.00 0.00 41.55 3.41
6541 7033 2.408050 GTGTAGAGGCACTGTTCAGTG 58.592 52.381 23.48 23.48 41.55 3.66
6542 7034 2.039418 TGTAGAGGCACTGTTCAGTGT 58.961 47.619 26.56 13.34 41.55 3.55
6622 7122 7.277098 TCTGTGTGTGTAGTTTTAGAAACTGTC 59.723 37.037 14.50 9.01 0.00 3.51
6662 7162 7.353414 TGTATAAGATTCAGGAAGAGACTGG 57.647 40.000 0.00 0.00 36.62 4.00
6743 7249 2.287637 GAACACGCGCCATTCCGTAC 62.288 60.000 5.73 0.00 35.69 3.67
6791 7299 4.675190 ACTCATTTCTTCAGTCATTGCG 57.325 40.909 0.00 0.00 0.00 4.85
6859 7372 5.454045 GGTTCAATTTTGTTTTAGCCTGGGA 60.454 40.000 0.00 0.00 0.00 4.37
6922 7537 4.020662 ACAAAACAACTCACATTTGGGTGT 60.021 37.500 0.00 0.00 36.16 4.16
6960 7576 4.268359 AGATCTCTTCAAATCCAAGCACC 58.732 43.478 0.00 0.00 0.00 5.01
6964 7580 5.819991 TCTCTTCAAATCCAAGCACCTATT 58.180 37.500 0.00 0.00 0.00 1.73
6967 7583 6.924111 TCTTCAAATCCAAGCACCTATTTTC 58.076 36.000 0.00 0.00 0.00 2.29
7012 7630 2.579410 ATACACACAAACTGACCCCC 57.421 50.000 0.00 0.00 0.00 5.40
7058 7676 8.268850 TCATTGTAGTTCTAATTTCTCCAAGC 57.731 34.615 0.00 0.00 0.00 4.01
7128 7751 7.284261 TGGTCACTTGTCAATTTCATCAACTAA 59.716 33.333 0.00 0.00 0.00 2.24
7129 7752 8.134895 GGTCACTTGTCAATTTCATCAACTAAA 58.865 33.333 0.00 0.00 0.00 1.85
7130 7753 8.958043 GTCACTTGTCAATTTCATCAACTAAAC 58.042 33.333 0.00 0.00 0.00 2.01
7131 7754 8.902806 TCACTTGTCAATTTCATCAACTAAACT 58.097 29.630 0.00 0.00 0.00 2.66
7262 7885 4.644685 AGCAATTTGCCATTACCGATTACT 59.355 37.500 17.51 0.00 46.52 2.24
7265 7888 3.916359 TTGCCATTACCGATTACTGGA 57.084 42.857 5.05 0.00 33.15 3.86
8235 8917 8.537728 TTCCAGATTATAAATGCTCCAAATGT 57.462 30.769 0.00 0.00 0.00 2.71
8311 8993 4.522114 TCCATATTTTGAAGCCGATGTCA 58.478 39.130 0.00 0.00 0.00 3.58
8397 9079 5.692654 TGCACACAAAAATTGAGATCACATG 59.307 36.000 0.00 0.00 0.00 3.21
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
438 452 0.037232 GAAGAGCGGGCAGTGTAGTT 60.037 55.000 0.00 0.00 0.00 2.24
442 456 3.303135 TCGAAGAGCGGGCAGTGT 61.303 61.111 0.00 0.00 41.33 3.55
642 680 2.368875 ACAACGACCATCACTTTCCTCT 59.631 45.455 0.00 0.00 0.00 3.69
777 832 1.209998 TGCGTCGATTCAAACGAACA 58.790 45.000 11.50 0.00 41.29 3.18
799 854 4.390909 CACCGCGGATAGAAAAGTTAGTTT 59.609 41.667 35.90 0.00 0.00 2.66
800 855 3.930848 CACCGCGGATAGAAAAGTTAGTT 59.069 43.478 35.90 0.00 0.00 2.24
813 868 0.744414 CTGTTTGGATCACCGCGGAT 60.744 55.000 35.90 17.02 39.42 4.18
839 894 1.942657 CTGCCGATTCATTTGATCCGT 59.057 47.619 0.00 0.00 0.00 4.69
859 914 4.618693 GCTACTCCACTAGACAACTCCAAC 60.619 50.000 0.00 0.00 0.00 3.77
862 917 3.090037 TGCTACTCCACTAGACAACTCC 58.910 50.000 0.00 0.00 0.00 3.85
864 919 3.118956 GCATGCTACTCCACTAGACAACT 60.119 47.826 11.37 0.00 0.00 3.16
866 921 2.168521 GGCATGCTACTCCACTAGACAA 59.831 50.000 18.92 0.00 0.00 3.18
868 923 2.035321 GAGGCATGCTACTCCACTAGAC 59.965 54.545 18.92 0.00 0.00 2.59
869 924 2.311463 GAGGCATGCTACTCCACTAGA 58.689 52.381 18.92 0.00 0.00 2.43
872 927 0.684479 TCGAGGCATGCTACTCCACT 60.684 55.000 18.92 3.59 0.00 4.00
873 928 0.175760 TTCGAGGCATGCTACTCCAC 59.824 55.000 18.92 0.00 0.00 4.02
874 929 0.461548 CTTCGAGGCATGCTACTCCA 59.538 55.000 18.92 2.20 0.00 3.86
966 1209 3.361158 TTGGTGCCGGATTGCGTG 61.361 61.111 5.05 0.00 0.00 5.34
1139 1395 1.231958 GGATGGAAACCGTGTGCGAA 61.232 55.000 0.00 0.00 41.33 4.70
1241 1497 2.401766 GCCACAAGATCCACGCTGG 61.402 63.158 0.00 0.00 39.43 4.85
1246 1502 2.471255 CGGAAGCCACAAGATCCAC 58.529 57.895 0.00 0.00 32.08 4.02
1347 1606 1.819632 ACCATCGCAATCGGCCTTC 60.820 57.895 0.00 0.00 40.31 3.46
1348 1607 2.114670 CACCATCGCAATCGGCCTT 61.115 57.895 0.00 0.00 40.31 4.35
1367 1626 2.257034 CCTAACCACGCGTAGAAGAAC 58.743 52.381 13.44 0.00 0.00 3.01
1389 1648 0.962356 AACAATCAAGCAGGGAGGCG 60.962 55.000 0.00 0.00 39.27 5.52
1392 1651 4.861102 AAAGAAACAATCAAGCAGGGAG 57.139 40.909 0.00 0.00 0.00 4.30
1394 1653 4.024641 GCAAAAAGAAACAATCAAGCAGGG 60.025 41.667 0.00 0.00 0.00 4.45
1395 1654 4.318263 CGCAAAAAGAAACAATCAAGCAGG 60.318 41.667 0.00 0.00 0.00 4.85
1396 1655 4.318263 CCGCAAAAAGAAACAATCAAGCAG 60.318 41.667 0.00 0.00 0.00 4.24
1397 1656 3.555139 CCGCAAAAAGAAACAATCAAGCA 59.445 39.130 0.00 0.00 0.00 3.91
1398 1657 3.059665 CCCGCAAAAAGAAACAATCAAGC 60.060 43.478 0.00 0.00 0.00 4.01
1399 1658 3.494251 CCCCGCAAAAAGAAACAATCAAG 59.506 43.478 0.00 0.00 0.00 3.02
1400 1659 3.462021 CCCCGCAAAAAGAAACAATCAA 58.538 40.909 0.00 0.00 0.00 2.57
1401 1660 2.224161 CCCCCGCAAAAAGAAACAATCA 60.224 45.455 0.00 0.00 0.00 2.57
1402 1661 2.224185 ACCCCCGCAAAAAGAAACAATC 60.224 45.455 0.00 0.00 0.00 2.67
1403 1662 1.765904 ACCCCCGCAAAAAGAAACAAT 59.234 42.857 0.00 0.00 0.00 2.71
1404 1663 1.196012 ACCCCCGCAAAAAGAAACAA 58.804 45.000 0.00 0.00 0.00 2.83
1405 1664 1.682323 GTACCCCCGCAAAAAGAAACA 59.318 47.619 0.00 0.00 0.00 2.83
1406 1665 1.000060 GGTACCCCCGCAAAAAGAAAC 60.000 52.381 0.00 0.00 0.00 2.78
1407 1666 1.330234 GGTACCCCCGCAAAAAGAAA 58.670 50.000 0.00 0.00 0.00 2.52
1408 1667 3.039452 GGTACCCCCGCAAAAAGAA 57.961 52.632 0.00 0.00 0.00 2.52
1409 1668 4.826248 GGTACCCCCGCAAAAAGA 57.174 55.556 0.00 0.00 0.00 2.52
1422 1681 1.943340 GCTAGCAATCAAGCAGGGTAC 59.057 52.381 10.63 0.00 36.85 3.34
1423 1682 1.839994 AGCTAGCAATCAAGCAGGGTA 59.160 47.619 18.83 0.00 36.85 3.69
1424 1683 0.622665 AGCTAGCAATCAAGCAGGGT 59.377 50.000 18.83 0.00 36.85 4.34
1476 1735 2.032071 AACACGGCACTGGGCTAC 59.968 61.111 0.21 0.00 44.01 3.58
1482 1741 0.307760 GAACCAAGAACACGGCACTG 59.692 55.000 0.00 0.00 0.00 3.66
1502 1762 4.294347 TCCCACAAAGAATCCCAAAAAGT 58.706 39.130 0.00 0.00 0.00 2.66
1503 1763 4.344968 ACTCCCACAAAGAATCCCAAAAAG 59.655 41.667 0.00 0.00 0.00 2.27
1507 1781 3.010138 CCTACTCCCACAAAGAATCCCAA 59.990 47.826 0.00 0.00 0.00 4.12
1521 1796 1.069935 GAATCGCAGCCCTACTCCC 59.930 63.158 0.00 0.00 0.00 4.30
1660 1935 4.325028 AGCACAATCACAGCAAAATTGA 57.675 36.364 0.00 0.00 35.03 2.57
1725 2000 2.620251 AGGGGAAGCAAACAAAAAGC 57.380 45.000 0.00 0.00 0.00 3.51
1750 2025 3.625853 TCACCCATGTGTGAACTGAAAA 58.374 40.909 8.69 0.00 42.06 2.29
1759 2034 3.822735 AGAGACAAATTCACCCATGTGTG 59.177 43.478 1.35 1.35 43.26 3.82
1809 2084 7.093945 ACAAAACCACACTCTAGACAAAATTGT 60.094 33.333 0.00 0.00 45.65 2.71
1831 2107 8.908903 ACTAACAAACATAGATGACCAAACAAA 58.091 29.630 0.00 0.00 0.00 2.83
1838 2114 5.121768 ACGCAACTAACAAACATAGATGACC 59.878 40.000 0.00 0.00 0.00 4.02
1923 2203 0.328258 ACTGATACAACACTGGGGCC 59.672 55.000 0.00 0.00 0.00 5.80
1925 2205 3.140325 ACAACTGATACAACACTGGGG 57.860 47.619 0.00 0.00 0.00 4.96
1927 2207 6.091305 CACATCTACAACTGATACAACACTGG 59.909 42.308 0.00 0.00 0.00 4.00
1928 2208 6.646653 ACACATCTACAACTGATACAACACTG 59.353 38.462 0.00 0.00 0.00 3.66
1930 2210 7.042051 ACAACACATCTACAACTGATACAACAC 60.042 37.037 0.00 0.00 0.00 3.32
1931 2211 6.989759 ACAACACATCTACAACTGATACAACA 59.010 34.615 0.00 0.00 0.00 3.33
1933 2213 6.426633 CCACAACACATCTACAACTGATACAA 59.573 38.462 0.00 0.00 0.00 2.41
1934 2214 5.931724 CCACAACACATCTACAACTGATACA 59.068 40.000 0.00 0.00 0.00 2.29
1952 2232 3.742369 CCATTCTTGTCATTTGCCACAAC 59.258 43.478 0.00 0.00 0.00 3.32
2232 2515 7.986889 GGCCACAATTTGTCCAAAATATATCTT 59.013 33.333 0.00 0.00 33.56 2.40
2235 2518 7.436320 AGGCCACAATTTGTCCAAAATATAT 57.564 32.000 5.01 0.00 33.56 0.86
2250 2533 4.475016 ACCTATCTCACTTTAGGCCACAAT 59.525 41.667 5.01 0.00 38.88 2.71
2307 2590 2.908688 TGTATCCGATGTCCCACATG 57.091 50.000 0.00 0.00 39.27 3.21
2436 2719 2.413837 TCCTTCCTTTTCGAGCGAAAG 58.586 47.619 16.25 11.27 43.75 2.62
2512 2795 6.596621 TCCATCACCCGTATATGAAAATTCA 58.403 36.000 0.00 0.00 42.14 2.57
2535 2818 6.371809 TTGATTCAGTGTGTTAACAGGTTC 57.628 37.500 8.98 0.00 36.84 3.62
3238 3541 9.439461 CCTATGATAATCCTATCCTATGAACCA 57.561 37.037 0.00 0.00 34.10 3.67
3239 3542 9.661954 TCCTATGATAATCCTATCCTATGAACC 57.338 37.037 0.00 0.00 34.10 3.62
3257 3560 9.621239 TTCCTACAAGATTCCTATTCCTATGAT 57.379 33.333 0.00 0.00 0.00 2.45
3258 3561 9.447279 TTTCCTACAAGATTCCTATTCCTATGA 57.553 33.333 0.00 0.00 0.00 2.15
3261 3564 9.447279 TCATTTCCTACAAGATTCCTATTCCTA 57.553 33.333 0.00 0.00 0.00 2.94
3263 3566 8.432805 TCTCATTTCCTACAAGATTCCTATTCC 58.567 37.037 0.00 0.00 0.00 3.01
3266 3569 9.163894 TCATCTCATTTCCTACAAGATTCCTAT 57.836 33.333 0.00 0.00 0.00 2.57
3268 3571 7.092712 TGTCATCTCATTTCCTACAAGATTCCT 60.093 37.037 0.00 0.00 0.00 3.36
3269 3572 7.050377 TGTCATCTCATTTCCTACAAGATTCC 58.950 38.462 0.00 0.00 0.00 3.01
3270 3573 8.557864 CATGTCATCTCATTTCCTACAAGATTC 58.442 37.037 0.00 0.00 0.00 2.52
3271 3574 8.051535 ACATGTCATCTCATTTCCTACAAGATT 58.948 33.333 0.00 0.00 0.00 2.40
3272 3575 7.571919 ACATGTCATCTCATTTCCTACAAGAT 58.428 34.615 0.00 0.00 0.00 2.40
3273 3576 6.950842 ACATGTCATCTCATTTCCTACAAGA 58.049 36.000 0.00 0.00 0.00 3.02
3274 3577 8.899427 ATACATGTCATCTCATTTCCTACAAG 57.101 34.615 0.00 0.00 0.00 3.16
3275 3578 8.708378 AGATACATGTCATCTCATTTCCTACAA 58.292 33.333 0.00 0.00 0.00 2.41
3276 3579 8.255111 AGATACATGTCATCTCATTTCCTACA 57.745 34.615 0.00 0.00 0.00 2.74
3277 3580 8.755696 GAGATACATGTCATCTCATTTCCTAC 57.244 38.462 24.95 8.46 45.17 3.18
3286 3589 9.368674 CATAGGATTTGAGATACATGTCATCTC 57.631 37.037 24.04 24.04 45.76 2.75
3287 3590 9.097946 TCATAGGATTTGAGATACATGTCATCT 57.902 33.333 0.00 9.42 35.43 2.90
3288 3591 9.368674 CTCATAGGATTTGAGATACATGTCATC 57.631 37.037 0.00 4.47 42.63 2.92
3289 3592 8.878211 ACTCATAGGATTTGAGATACATGTCAT 58.122 33.333 0.00 0.00 42.63 3.06
3290 3593 8.255111 ACTCATAGGATTTGAGATACATGTCA 57.745 34.615 0.00 0.00 42.63 3.58
3291 3594 9.853555 CTACTCATAGGATTTGAGATACATGTC 57.146 37.037 0.00 0.00 42.63 3.06
3308 3611 9.703892 CATCTTGTTTCCTATTCCTACTCATAG 57.296 37.037 0.00 0.00 0.00 2.23
3309 3612 9.213777 ACATCTTGTTTCCTATTCCTACTCATA 57.786 33.333 0.00 0.00 0.00 2.15
3310 3613 8.095452 ACATCTTGTTTCCTATTCCTACTCAT 57.905 34.615 0.00 0.00 0.00 2.90
3311 3614 7.180229 TGACATCTTGTTTCCTATTCCTACTCA 59.820 37.037 0.00 0.00 0.00 3.41
3312 3615 7.556844 TGACATCTTGTTTCCTATTCCTACTC 58.443 38.462 0.00 0.00 0.00 2.59
3313 3616 7.496346 TGACATCTTGTTTCCTATTCCTACT 57.504 36.000 0.00 0.00 0.00 2.57
3314 3617 8.738645 AATGACATCTTGTTTCCTATTCCTAC 57.261 34.615 0.00 0.00 0.00 3.18
3315 3618 9.177608 CAAATGACATCTTGTTTCCTATTCCTA 57.822 33.333 0.00 0.00 0.00 2.94
3316 3619 7.123247 CCAAATGACATCTTGTTTCCTATTCCT 59.877 37.037 0.00 0.00 0.00 3.36
3317 3620 7.093771 ACCAAATGACATCTTGTTTCCTATTCC 60.094 37.037 0.00 0.00 0.00 3.01
3318 3621 7.830739 ACCAAATGACATCTTGTTTCCTATTC 58.169 34.615 0.00 0.00 0.00 1.75
3319 3622 7.781324 ACCAAATGACATCTTGTTTCCTATT 57.219 32.000 0.00 0.00 0.00 1.73
3320 3623 7.451255 TCAACCAAATGACATCTTGTTTCCTAT 59.549 33.333 0.00 0.00 0.00 2.57
3321 3624 6.775142 TCAACCAAATGACATCTTGTTTCCTA 59.225 34.615 0.00 0.00 0.00 2.94
3322 3625 5.598005 TCAACCAAATGACATCTTGTTTCCT 59.402 36.000 0.00 0.00 0.00 3.36
3323 3626 5.841810 TCAACCAAATGACATCTTGTTTCC 58.158 37.500 0.00 0.00 0.00 3.13
3341 3644 4.814234 GGAAAAATTCCTTTGGTGTCAACC 59.186 41.667 1.86 0.00 46.57 3.77
3342 3645 5.984233 GGAAAAATTCCTTTGGTGTCAAC 57.016 39.130 1.86 0.00 46.57 3.18
3353 3656 8.285329 GAGCCTAGACTCAATGGAAAAATTCCT 61.285 40.741 10.28 0.00 42.21 3.36
3354 3657 6.183360 GAGCCTAGACTCAATGGAAAAATTCC 60.183 42.308 0.51 2.12 42.14 3.01
3355 3658 6.601217 AGAGCCTAGACTCAATGGAAAAATTC 59.399 38.462 8.89 0.00 39.26 2.17
3356 3659 6.488715 AGAGCCTAGACTCAATGGAAAAATT 58.511 36.000 8.89 0.00 39.26 1.82
3357 3660 6.072199 AGAGCCTAGACTCAATGGAAAAAT 57.928 37.500 8.89 0.00 39.26 1.82
3358 3661 5.505181 AGAGCCTAGACTCAATGGAAAAA 57.495 39.130 8.89 0.00 39.26 1.94
3359 3662 5.505181 AAGAGCCTAGACTCAATGGAAAA 57.495 39.130 8.89 0.00 39.26 2.29
3360 3663 5.505181 AAAGAGCCTAGACTCAATGGAAA 57.495 39.130 8.89 0.00 39.26 3.13
3361 3664 5.505181 AAAAGAGCCTAGACTCAATGGAA 57.495 39.130 8.89 0.00 39.26 3.53
3362 3665 5.505181 AAAAAGAGCCTAGACTCAATGGA 57.495 39.130 8.89 0.00 39.26 3.41
3382 3685 9.540538 TCCTCCACATTTCATAGGAAAATAAAA 57.459 29.630 6.65 0.00 45.52 1.52
3383 3686 9.713684 ATCCTCCACATTTCATAGGAAAATAAA 57.286 29.630 6.65 0.00 45.52 1.40
3386 3689 7.946776 CCTATCCTCCACATTTCATAGGAAAAT 59.053 37.037 6.65 0.00 45.52 1.82
3387 3690 7.128728 TCCTATCCTCCACATTTCATAGGAAAA 59.871 37.037 6.65 0.00 45.52 2.29
3388 3691 6.619437 TCCTATCCTCCACATTTCATAGGAAA 59.381 38.462 4.85 4.85 46.36 3.13
3389 3692 6.150332 TCCTATCCTCCACATTTCATAGGAA 58.850 40.000 3.47 0.00 39.17 3.36
3390 3693 5.726560 TCCTATCCTCCACATTTCATAGGA 58.273 41.667 2.01 2.01 39.61 2.94
3391 3694 6.234177 GTTCCTATCCTCCACATTTCATAGG 58.766 44.000 0.00 0.00 35.93 2.57
3392 3695 6.183361 TGGTTCCTATCCTCCACATTTCATAG 60.183 42.308 0.00 0.00 0.00 2.23
3393 3696 5.669904 TGGTTCCTATCCTCCACATTTCATA 59.330 40.000 0.00 0.00 0.00 2.15
3394 3697 4.478317 TGGTTCCTATCCTCCACATTTCAT 59.522 41.667 0.00 0.00 0.00 2.57
3395 3698 3.849574 TGGTTCCTATCCTCCACATTTCA 59.150 43.478 0.00 0.00 0.00 2.69
3396 3699 4.503714 TGGTTCCTATCCTCCACATTTC 57.496 45.455 0.00 0.00 0.00 2.17
3397 3700 4.946160 TTGGTTCCTATCCTCCACATTT 57.054 40.909 0.00 0.00 0.00 2.32
3398 3701 4.141158 GGATTGGTTCCTATCCTCCACATT 60.141 45.833 19.71 0.00 41.78 2.71
3399 3702 3.395941 GGATTGGTTCCTATCCTCCACAT 59.604 47.826 19.71 0.00 41.78 3.21
3400 3703 2.777692 GGATTGGTTCCTATCCTCCACA 59.222 50.000 19.71 0.00 41.78 4.17
3401 3704 3.493767 GGATTGGTTCCTATCCTCCAC 57.506 52.381 19.71 0.00 41.78 4.02
3435 3738 5.302823 CCCTTTGGTTCATAGGAATGGATTC 59.697 44.000 6.07 0.00 35.14 2.52
3436 3739 5.211201 CCCTTTGGTTCATAGGAATGGATT 58.789 41.667 6.07 0.00 35.14 3.01
3437 3740 4.808042 CCCTTTGGTTCATAGGAATGGAT 58.192 43.478 6.07 0.00 35.14 3.41
3438 3741 3.627237 GCCCTTTGGTTCATAGGAATGGA 60.627 47.826 6.07 0.00 35.14 3.41
3439 3742 2.695147 GCCCTTTGGTTCATAGGAATGG 59.305 50.000 6.07 0.00 35.14 3.16
3440 3743 3.633986 GAGCCCTTTGGTTCATAGGAATG 59.366 47.826 6.07 0.00 41.28 2.67
3441 3744 3.529319 AGAGCCCTTTGGTTCATAGGAAT 59.471 43.478 6.07 0.00 43.89 3.01
3442 3745 2.919602 AGAGCCCTTTGGTTCATAGGAA 59.080 45.455 6.07 0.00 43.89 3.36
3443 3746 2.562296 AGAGCCCTTTGGTTCATAGGA 58.438 47.619 6.07 0.00 43.89 2.94
3444 3747 4.503714 TTAGAGCCCTTTGGTTCATAGG 57.496 45.455 0.00 0.00 43.89 2.57
3445 3748 4.884164 CCTTTAGAGCCCTTTGGTTCATAG 59.116 45.833 0.00 0.00 43.89 2.23
3446 3749 4.538490 TCCTTTAGAGCCCTTTGGTTCATA 59.462 41.667 0.00 0.00 43.89 2.15
3447 3750 3.333680 TCCTTTAGAGCCCTTTGGTTCAT 59.666 43.478 0.00 0.00 43.89 2.57
3448 3751 2.714250 TCCTTTAGAGCCCTTTGGTTCA 59.286 45.455 0.00 0.00 43.89 3.18
3449 3752 3.434940 TCCTTTAGAGCCCTTTGGTTC 57.565 47.619 0.00 0.00 41.91 3.62
3450 3753 3.895704 TTCCTTTAGAGCCCTTTGGTT 57.104 42.857 0.00 0.00 0.00 3.67
3451 3754 3.895704 TTTCCTTTAGAGCCCTTTGGT 57.104 42.857 0.00 0.00 0.00 3.67
3482 3785 9.713684 CATAGGAATTCTAGAGGATAGGATTCT 57.286 37.037 13.16 5.20 38.80 2.40
3483 3786 9.707957 TCATAGGAATTCTAGAGGATAGGATTC 57.292 37.037 5.23 7.20 38.32 2.52
3490 3793 9.404077 AGGAATTTCATAGGAATTCTAGAGGAT 57.596 33.333 5.23 0.00 31.93 3.24
3491 3794 8.805145 AGGAATTTCATAGGAATTCTAGAGGA 57.195 34.615 5.23 0.00 31.93 3.71
3492 3795 8.879227 AGAGGAATTTCATAGGAATTCTAGAGG 58.121 37.037 5.23 0.00 31.93 3.69
3497 3800 9.634021 GGTTTAGAGGAATTTCATAGGAATTCT 57.366 33.333 5.23 0.00 31.93 2.40
3498 3801 9.408648 TGGTTTAGAGGAATTTCATAGGAATTC 57.591 33.333 0.00 0.00 31.93 2.17
3499 3802 9.768215 TTGGTTTAGAGGAATTTCATAGGAATT 57.232 29.630 0.00 0.00 31.93 2.17
3500 3803 9.768215 TTTGGTTTAGAGGAATTTCATAGGAAT 57.232 29.630 0.00 0.00 31.93 3.01
3501 3804 9.243105 CTTTGGTTTAGAGGAATTTCATAGGAA 57.757 33.333 0.00 0.00 0.00 3.36
3502 3805 7.834181 CCTTTGGTTTAGAGGAATTTCATAGGA 59.166 37.037 0.00 0.00 32.11 2.94
3503 3806 7.834181 TCCTTTGGTTTAGAGGAATTTCATAGG 59.166 37.037 0.00 0.00 36.67 2.57
3504 3807 8.807948 TCCTTTGGTTTAGAGGAATTTCATAG 57.192 34.615 0.00 0.00 36.67 2.23
3505 3808 8.807948 CTCCTTTGGTTTAGAGGAATTTCATA 57.192 34.615 0.00 0.00 39.00 2.15
3506 3809 7.709149 CTCCTTTGGTTTAGAGGAATTTCAT 57.291 36.000 0.00 0.00 39.00 2.57
3515 3818 9.331282 CAATCTAATACCTCCTTTGGTTTAGAG 57.669 37.037 15.81 0.00 39.70 2.43
3516 3819 8.832735 ACAATCTAATACCTCCTTTGGTTTAGA 58.167 33.333 14.36 14.36 40.08 2.10
3517 3820 9.462606 AACAATCTAATACCTCCTTTGGTTTAG 57.537 33.333 0.00 0.00 41.22 1.85
3518 3821 9.816787 AAACAATCTAATACCTCCTTTGGTTTA 57.183 29.630 0.00 0.00 41.22 2.01
3519 3822 8.721133 AAACAATCTAATACCTCCTTTGGTTT 57.279 30.769 0.00 0.00 41.22 3.27
3520 3823 9.239551 GTAAACAATCTAATACCTCCTTTGGTT 57.760 33.333 0.00 0.00 41.22 3.67
3521 3824 8.612145 AGTAAACAATCTAATACCTCCTTTGGT 58.388 33.333 0.00 0.00 43.66 3.67
3522 3825 8.893727 CAGTAAACAATCTAATACCTCCTTTGG 58.106 37.037 0.00 0.00 0.00 3.28
3523 3826 9.667107 TCAGTAAACAATCTAATACCTCCTTTG 57.333 33.333 0.00 0.00 0.00 2.77
3524 3827 9.892130 CTCAGTAAACAATCTAATACCTCCTTT 57.108 33.333 0.00 0.00 0.00 3.11
3525 3828 7.988028 GCTCAGTAAACAATCTAATACCTCCTT 59.012 37.037 0.00 0.00 0.00 3.36
3526 3829 7.345914 AGCTCAGTAAACAATCTAATACCTCCT 59.654 37.037 0.00 0.00 0.00 3.69
3527 3830 7.501844 AGCTCAGTAAACAATCTAATACCTCC 58.498 38.462 0.00 0.00 0.00 4.30
3528 3831 8.950208 AAGCTCAGTAAACAATCTAATACCTC 57.050 34.615 0.00 0.00 0.00 3.85
3748 4051 3.820557 AGTGAACAGGCTTACACAACAT 58.179 40.909 14.69 0.00 35.97 2.71
3864 4170 2.026636 TGTTCCTGGGAAAATAGACCGG 60.027 50.000 0.00 0.00 35.75 5.28
4075 4381 5.494724 TGTTCATCCTGAGAAGGAATCAAG 58.505 41.667 0.00 0.00 41.90 3.02
4109 4415 6.209391 CCCATGTAGTCCTGAAAGACAATTTT 59.791 38.462 0.00 0.00 39.34 1.82
4127 4433 4.662278 GAAGCCCAATATTAGCCCATGTA 58.338 43.478 6.12 0.00 0.00 2.29
4158 4464 4.991056 GCGACATCTATGGCTATTTCAAGA 59.009 41.667 0.00 0.00 32.20 3.02
4179 4485 3.189287 GCAGATAAGTTAATCCATGGGCG 59.811 47.826 13.02 0.00 0.00 6.13
4274 4580 8.868522 TCAGAATGAAAAGTAGAACCATTCAT 57.131 30.769 13.60 0.00 45.97 2.57
4292 4598 6.403309 CCTGAACATGTGACTGAATCAGAATG 60.403 42.308 18.20 15.39 38.28 2.67
4383 4689 3.606777 CACGATAACTGACAAGTACCACG 59.393 47.826 0.00 0.00 34.77 4.94
4403 4710 0.385473 CCGAAAACGTGTGCCATCAC 60.385 55.000 0.00 0.00 43.40 3.06
4420 4727 3.119637 ACGGACAGCCAAAATAATTTCCG 60.120 43.478 5.20 5.20 42.01 4.30
4481 4788 2.229675 ACGTTAGGCCCGCTTAATAC 57.770 50.000 0.00 0.00 0.00 1.89
4516 4823 2.288702 TGCACGGCAAATGCTTATTTGT 60.289 40.909 12.63 0.00 43.77 2.83
4571 4879 5.964958 ATTAGGATTGTGTGTCCTTGTTG 57.035 39.130 0.00 0.00 43.52 3.33
4579 4887 5.472148 CACATGCAAATTAGGATTGTGTGT 58.528 37.500 0.00 0.00 32.03 3.72
4648 4957 7.440856 GCATTTAAATGGAGGACACAAAAGAAA 59.559 33.333 25.61 0.00 36.90 2.52
4650 4959 6.041409 TGCATTTAAATGGAGGACACAAAAGA 59.959 34.615 25.61 0.00 36.90 2.52
4651 4960 6.222389 TGCATTTAAATGGAGGACACAAAAG 58.778 36.000 25.61 0.07 36.90 2.27
4652 4961 6.166984 TGCATTTAAATGGAGGACACAAAA 57.833 33.333 25.61 0.00 36.90 2.44
4767 5083 3.326747 AGAATGCGTCTGTTTACCTGTC 58.673 45.455 0.00 0.00 34.29 3.51
5263 5579 7.750229 AAAGAGAAATCTTGAGCAACATACA 57.250 32.000 0.00 0.00 0.00 2.29
5322 5638 5.359576 TGCTTGTGTTTACAAATTGTCTCCT 59.640 36.000 0.22 0.00 45.53 3.69
5326 5642 6.310224 AGTTGTGCTTGTGTTTACAAATTGTC 59.690 34.615 0.22 0.00 45.53 3.18
5602 5923 4.012374 ACGAGGATGCAATGAATTGAACT 58.988 39.130 7.21 0.00 40.14 3.01
5735 6056 1.540118 TGTACACATGGAGGGGGCA 60.540 57.895 0.00 0.00 0.00 5.36
5766 6088 9.579932 TGATATCTGAGATACTGTGACAATAGT 57.420 33.333 3.96 0.03 0.00 2.12
5841 6331 3.048600 AGATGGGATAAGCAGCCTAACA 58.951 45.455 0.00 0.00 0.00 2.41
5846 6336 2.751806 GCAATAGATGGGATAAGCAGCC 59.248 50.000 0.00 0.00 0.00 4.85
5882 6372 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
5883 6373 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
5884 6374 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
5885 6375 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
5886 6376 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
5887 6377 8.248945 TCTAGAAAGACAAGTATTTAGGAACGG 58.751 37.037 0.00 0.00 0.00 4.44
5888 6378 9.291664 CTCTAGAAAGACAAGTATTTAGGAACG 57.708 37.037 0.00 0.00 0.00 3.95
5903 6393 9.818796 GTCATTTGTTGAAATCTCTAGAAAGAC 57.181 33.333 0.00 0.00 35.70 3.01
5904 6394 9.784531 AGTCATTTGTTGAAATCTCTAGAAAGA 57.215 29.630 0.00 0.00 35.70 2.52
5907 6397 9.996554 TGTAGTCATTTGTTGAAATCTCTAGAA 57.003 29.630 0.00 0.00 35.70 2.10
5911 6401 8.873830 CGTATGTAGTCATTTGTTGAAATCTCT 58.126 33.333 0.00 0.00 35.70 3.10
5912 6402 8.869897 TCGTATGTAGTCATTTGTTGAAATCTC 58.130 33.333 0.00 0.00 35.70 2.75
5913 6403 8.771920 TCGTATGTAGTCATTTGTTGAAATCT 57.228 30.769 0.00 0.00 35.70 2.40
5914 6404 9.478019 CTTCGTATGTAGTCATTTGTTGAAATC 57.522 33.333 0.00 0.00 35.70 2.17
5915 6405 7.962918 GCTTCGTATGTAGTCATTTGTTGAAAT 59.037 33.333 0.00 0.00 35.70 2.17
5916 6406 7.041712 TGCTTCGTATGTAGTCATTTGTTGAAA 60.042 33.333 0.00 0.00 35.70 2.69
5917 6407 6.425417 TGCTTCGTATGTAGTCATTTGTTGAA 59.575 34.615 0.00 0.00 35.70 2.69
5918 6408 5.929415 TGCTTCGTATGTAGTCATTTGTTGA 59.071 36.000 0.00 0.00 35.70 3.18
5919 6409 6.164408 TGCTTCGTATGTAGTCATTTGTTG 57.836 37.500 0.00 0.00 35.70 3.33
5920 6410 6.795098 TTGCTTCGTATGTAGTCATTTGTT 57.205 33.333 0.00 0.00 35.70 2.83
5921 6411 6.795098 TTTGCTTCGTATGTAGTCATTTGT 57.205 33.333 0.00 0.00 35.70 2.83
5922 6412 7.962373 TCATTTTGCTTCGTATGTAGTCATTTG 59.038 33.333 0.00 0.00 35.70 2.32
5923 6413 8.039603 TCATTTTGCTTCGTATGTAGTCATTT 57.960 30.769 0.00 0.00 35.70 2.32
5924 6414 7.334421 ACTCATTTTGCTTCGTATGTAGTCATT 59.666 33.333 0.00 0.00 35.70 2.57
5925 6415 6.818644 ACTCATTTTGCTTCGTATGTAGTCAT 59.181 34.615 0.00 0.00 38.00 3.06
5926 6416 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
5927 6417 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
5928 6418 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
5929 6419 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
5930 6420 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
5931 6421 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
5932 6422 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
5933 6423 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
5934 6424 9.031360 GTATAGATTCACTCATTTTGCTTCGTA 57.969 33.333 0.00 0.00 0.00 3.43
5935 6425 6.992063 ATAGATTCACTCATTTTGCTTCGT 57.008 33.333 0.00 0.00 0.00 3.85
5936 6426 8.136057 AGTATAGATTCACTCATTTTGCTTCG 57.864 34.615 0.00 0.00 0.00 3.79
5937 6427 9.323985 AGAGTATAGATTCACTCATTTTGCTTC 57.676 33.333 4.70 0.00 42.99 3.86
5977 6467 4.161565 AGTGGACACAACATACGGATGTAT 59.838 41.667 15.10 2.23 45.93 2.29
5978 6468 3.512329 AGTGGACACAACATACGGATGTA 59.488 43.478 15.10 0.00 45.93 2.29
5980 6470 2.972625 AGTGGACACAACATACGGATG 58.027 47.619 5.94 5.94 39.16 3.51
5981 6471 3.007506 TCAAGTGGACACAACATACGGAT 59.992 43.478 5.14 0.00 0.00 4.18
5982 6472 2.365941 TCAAGTGGACACAACATACGGA 59.634 45.455 5.14 0.00 0.00 4.69
5983 6473 2.761559 TCAAGTGGACACAACATACGG 58.238 47.619 5.14 0.00 0.00 4.02
5984 6474 4.804608 TTTCAAGTGGACACAACATACG 57.195 40.909 5.14 0.00 0.00 3.06
5985 6475 6.017109 AGACATTTCAAGTGGACACAACATAC 60.017 38.462 5.14 0.00 0.00 2.39
5986 6476 6.061441 AGACATTTCAAGTGGACACAACATA 58.939 36.000 5.14 0.00 0.00 2.29
5987 6477 4.889409 AGACATTTCAAGTGGACACAACAT 59.111 37.500 5.14 0.00 0.00 2.71
5988 6478 4.269183 AGACATTTCAAGTGGACACAACA 58.731 39.130 5.14 0.00 0.00 3.33
5989 6479 4.900635 AGACATTTCAAGTGGACACAAC 57.099 40.909 5.14 0.00 0.00 3.32
5990 6480 5.924356 TCTAGACATTTCAAGTGGACACAA 58.076 37.500 5.14 0.00 0.00 3.33
5991 6481 5.545063 TCTAGACATTTCAAGTGGACACA 57.455 39.130 5.14 0.00 0.00 3.72
5992 6482 6.706270 TCTTTCTAGACATTTCAAGTGGACAC 59.294 38.462 0.00 0.00 0.00 3.67
5993 6483 6.826668 TCTTTCTAGACATTTCAAGTGGACA 58.173 36.000 0.00 0.00 0.00 4.02
6008 6498 7.335924 CCGTTCCCAAATATTTGTCTTTCTAGA 59.664 37.037 23.24 7.17 36.45 2.43
6009 6499 7.335924 TCCGTTCCCAAATATTTGTCTTTCTAG 59.664 37.037 23.24 8.23 36.45 2.43
6010 6500 7.169591 TCCGTTCCCAAATATTTGTCTTTCTA 58.830 34.615 23.24 5.03 36.45 2.10
6011 6501 6.007703 TCCGTTCCCAAATATTTGTCTTTCT 58.992 36.000 23.24 0.00 36.45 2.52
6012 6502 6.262193 TCCGTTCCCAAATATTTGTCTTTC 57.738 37.500 23.24 10.84 36.45 2.62
6013 6503 5.185056 CCTCCGTTCCCAAATATTTGTCTTT 59.815 40.000 23.24 0.00 36.45 2.52
6014 6504 4.705023 CCTCCGTTCCCAAATATTTGTCTT 59.295 41.667 23.24 0.00 36.45 3.01
6015 6505 4.270008 CCTCCGTTCCCAAATATTTGTCT 58.730 43.478 23.24 0.00 36.45 3.41
6016 6506 3.380320 CCCTCCGTTCCCAAATATTTGTC 59.620 47.826 23.24 11.68 36.45 3.18
6017 6507 3.010808 TCCCTCCGTTCCCAAATATTTGT 59.989 43.478 23.24 0.00 36.45 2.83
6018 6508 3.626930 TCCCTCCGTTCCCAAATATTTG 58.373 45.455 19.40 19.40 37.90 2.32
6019 6509 3.268595 ACTCCCTCCGTTCCCAAATATTT 59.731 43.478 0.00 0.00 0.00 1.40
6020 6510 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
6021 6511 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
6022 6512 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
6023 6513 1.558294 GTACTCCCTCCGTTCCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32
6024 6514 0.978907 GTACTCCCTCCGTTCCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
6025 6515 0.178926 TGTACTCCCTCCGTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
6026 6516 0.178926 TTGTACTCCCTCCGTTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
6027 6517 0.535797 CTTGTACTCCCTCCGTTCCC 59.464 60.000 0.00 0.00 0.00 3.97
6028 6518 0.108281 GCTTGTACTCCCTCCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
6029 6519 0.108281 GGCTTGTACTCCCTCCGTTC 60.108 60.000 0.00 0.00 0.00 3.95
6030 6520 0.834687 TGGCTTGTACTCCCTCCGTT 60.835 55.000 0.00 0.00 0.00 4.44
6031 6521 0.617820 ATGGCTTGTACTCCCTCCGT 60.618 55.000 0.00 0.00 0.00 4.69
6032 6522 0.105039 GATGGCTTGTACTCCCTCCG 59.895 60.000 0.00 0.00 0.00 4.63
6033 6523 1.501582 AGATGGCTTGTACTCCCTCC 58.498 55.000 0.00 0.00 0.00 4.30
6034 6524 3.070302 CCTTAGATGGCTTGTACTCCCTC 59.930 52.174 0.00 0.00 0.00 4.30
6035 6525 3.041946 CCTTAGATGGCTTGTACTCCCT 58.958 50.000 0.00 0.00 0.00 4.20
6036 6526 2.772515 ACCTTAGATGGCTTGTACTCCC 59.227 50.000 0.00 0.00 0.00 4.30
6037 6527 4.192317 CAACCTTAGATGGCTTGTACTCC 58.808 47.826 0.00 0.00 0.00 3.85
6038 6528 4.192317 CCAACCTTAGATGGCTTGTACTC 58.808 47.826 0.00 0.00 0.00 2.59
6039 6529 3.587506 ACCAACCTTAGATGGCTTGTACT 59.412 43.478 4.34 0.00 40.51 2.73
6040 6530 3.951663 ACCAACCTTAGATGGCTTGTAC 58.048 45.455 4.34 0.00 40.51 2.90
6041 6531 5.968676 ATACCAACCTTAGATGGCTTGTA 57.031 39.130 4.34 0.00 40.51 2.41
6042 6532 4.862641 ATACCAACCTTAGATGGCTTGT 57.137 40.909 4.34 0.00 40.51 3.16
6043 6533 6.294176 GCATTATACCAACCTTAGATGGCTTG 60.294 42.308 4.34 0.00 40.51 4.01
6044 6534 5.770162 GCATTATACCAACCTTAGATGGCTT 59.230 40.000 4.34 0.00 40.51 4.35
6045 6535 5.316987 GCATTATACCAACCTTAGATGGCT 58.683 41.667 4.34 0.00 40.51 4.75
6046 6536 4.459337 GGCATTATACCAACCTTAGATGGC 59.541 45.833 4.34 0.00 40.51 4.40
6047 6537 5.880901 AGGCATTATACCAACCTTAGATGG 58.119 41.667 3.10 3.10 42.60 3.51
6048 6538 7.502226 TCAAAGGCATTATACCAACCTTAGATG 59.498 37.037 0.00 0.00 39.80 2.90
6049 6539 7.582719 TCAAAGGCATTATACCAACCTTAGAT 58.417 34.615 0.00 0.00 39.80 1.98
6050 6540 6.964464 TCAAAGGCATTATACCAACCTTAGA 58.036 36.000 0.00 0.00 39.80 2.10
6051 6541 7.651808 CATCAAAGGCATTATACCAACCTTAG 58.348 38.462 0.00 0.00 39.80 2.18
6052 6542 6.040391 GCATCAAAGGCATTATACCAACCTTA 59.960 38.462 0.00 0.00 39.80 2.69
6053 6543 5.163416 GCATCAAAGGCATTATACCAACCTT 60.163 40.000 0.00 0.00 42.48 3.50
6054 6544 4.342092 GCATCAAAGGCATTATACCAACCT 59.658 41.667 0.00 0.00 0.00 3.50
6055 6545 4.099266 TGCATCAAAGGCATTATACCAACC 59.901 41.667 0.00 0.00 36.11 3.77
6056 6546 5.261209 TGCATCAAAGGCATTATACCAAC 57.739 39.130 0.00 0.00 36.11 3.77
6140 6630 9.130312 CTTATTCAGTATATCCTCGTTTACTGC 57.870 37.037 4.48 0.00 40.72 4.40
6310 6800 3.508845 AAGCAGTCAATAACCCAGTGT 57.491 42.857 0.00 0.00 0.00 3.55
6388 6880 3.617540 TCGTGTTCGACAAAAATGCAT 57.382 38.095 0.00 0.00 41.35 3.96
6535 7027 4.455533 GGCACATATCACTGAAACACTGAA 59.544 41.667 0.00 0.00 0.00 3.02
6536 7028 4.002982 GGCACATATCACTGAAACACTGA 58.997 43.478 0.00 0.00 0.00 3.41
6537 7029 3.127548 GGGCACATATCACTGAAACACTG 59.872 47.826 0.00 0.00 0.00 3.66
6538 7030 3.009473 AGGGCACATATCACTGAAACACT 59.991 43.478 0.00 0.00 0.00 3.55
6539 7031 3.127548 CAGGGCACATATCACTGAAACAC 59.872 47.826 0.00 0.00 0.00 3.32
6540 7032 3.346315 CAGGGCACATATCACTGAAACA 58.654 45.455 0.00 0.00 0.00 2.83
6541 7033 2.684881 CCAGGGCACATATCACTGAAAC 59.315 50.000 0.00 0.00 0.00 2.78
6542 7034 2.575735 TCCAGGGCACATATCACTGAAA 59.424 45.455 0.00 0.00 0.00 2.69
6622 7122 7.987268 TCTTATACAAGTCGACAATGCTTAG 57.013 36.000 19.50 11.28 33.20 2.18
6688 7193 6.795590 AGTCCAGGCAGAGTATATACTACAT 58.204 40.000 15.42 3.69 36.50 2.29
6791 7299 6.142139 GCAAAAATTTGAATTGTACAAGGCC 58.858 36.000 14.65 0.00 40.55 5.19
6964 7580 8.882415 AGTGTTCTTATGAGTTTAAGTCGAAA 57.118 30.769 0.00 0.00 32.21 3.46
6967 7583 8.967552 ACTAGTGTTCTTATGAGTTTAAGTCG 57.032 34.615 0.00 0.00 32.21 4.18
7080 7698 1.069823 CTCCAGTGTTCAGTCACAGCT 59.930 52.381 0.00 0.00 40.37 4.24
7128 7751 4.953579 AACACAAAGGTTCATGTGGTAGTT 59.046 37.500 10.29 0.00 45.21 2.24
7129 7752 4.532834 AACACAAAGGTTCATGTGGTAGT 58.467 39.130 10.29 0.00 45.21 2.73
7130 7753 4.023193 GGAACACAAAGGTTCATGTGGTAG 60.023 45.833 10.29 0.00 46.91 3.18
7131 7754 3.886505 GGAACACAAAGGTTCATGTGGTA 59.113 43.478 10.29 0.00 46.91 3.25
7262 7885 4.159135 GTCGTACTGGTCCTTAATTCTCCA 59.841 45.833 0.00 0.00 0.00 3.86
7265 7888 4.091549 TGGTCGTACTGGTCCTTAATTCT 58.908 43.478 0.00 0.00 0.00 2.40
7282 7905 2.985896 ACTACACAATCCCATTGGTCG 58.014 47.619 1.20 0.00 44.42 4.79
7313 7936 2.430367 GTCCCTGCTCCGTTGGTT 59.570 61.111 0.00 0.00 0.00 3.67
7439 8063 7.331193 TCGCTCTTAAGAAAAGGTTGTCTATTC 59.669 37.037 6.63 0.00 0.00 1.75
7661 8295 9.919348 CATAACCAATGTTTTCTTTGTCTTTTG 57.081 29.630 0.00 0.00 35.87 2.44
7666 8300 6.922957 TCTGCATAACCAATGTTTTCTTTGTC 59.077 34.615 0.00 0.00 37.93 3.18
7668 8302 7.439056 ACTTCTGCATAACCAATGTTTTCTTTG 59.561 33.333 0.00 0.00 37.93 2.77
7670 8304 6.925165 CACTTCTGCATAACCAATGTTTTCTT 59.075 34.615 0.00 0.00 37.93 2.52
7672 8306 6.446318 TCACTTCTGCATAACCAATGTTTTC 58.554 36.000 0.00 0.00 37.93 2.29
7856 8531 2.244695 ACCTGAACACCTCGTATGTGA 58.755 47.619 8.32 0.00 37.18 3.58
7896 8572 4.465886 TCTTGGTTTAAGCTTTGTGGCTA 58.534 39.130 3.20 0.00 42.24 3.93
8235 8917 2.333926 CGTTCGCAATAGTTCTGGTGA 58.666 47.619 0.00 0.00 0.00 4.02
8311 8993 5.766174 TGCAGGTTTTACGGAAGAACTATTT 59.234 36.000 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.