Multiple sequence alignment - TraesCS2A01G357600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G357600 chr2A 100.000 5406 0 0 1 5406 602120917 602126322 0.000000e+00 9984.0
1 TraesCS2A01G357600 chr2A 86.747 996 111 14 1814 2797 277138919 277137933 0.000000e+00 1088.0
2 TraesCS2A01G357600 chr2A 85.344 771 72 21 2800 3550 277137876 277137127 0.000000e+00 760.0
3 TraesCS2A01G357600 chr2A 80.774 775 91 35 3649 4402 277137126 277136389 2.200000e-153 553.0
4 TraesCS2A01G357600 chr2D 90.430 3166 199 56 1463 4582 458732850 458735957 0.000000e+00 4072.0
5 TraesCS2A01G357600 chr2D 87.331 963 101 12 1813 2764 206239618 206240570 0.000000e+00 1083.0
6 TraesCS2A01G357600 chr2D 86.615 777 65 23 2797 3550 206240656 206241416 0.000000e+00 822.0
7 TraesCS2A01G357600 chr2D 92.344 418 30 1 4728 5145 458745806 458746221 1.300000e-165 593.0
8 TraesCS2A01G357600 chr2D 79.843 764 103 28 3649 4396 206241417 206242145 1.340000e-140 510.0
9 TraesCS2A01G357600 chr2D 87.834 337 25 2 1 321 328254888 328255224 1.100000e-101 381.0
10 TraesCS2A01G357600 chr2D 79.278 526 38 29 666 1159 458732146 458732632 8.800000e-78 302.0
11 TraesCS2A01G357600 chr2D 86.989 269 32 2 5141 5406 458908608 458908876 3.160000e-77 300.0
12 TraesCS2A01G357600 chr2D 87.662 154 6 1 4583 4736 458745644 458745784 3.350000e-37 167.0
13 TraesCS2A01G357600 chr2D 81.553 103 11 5 1373 1467 458732695 458732797 1.610000e-10 78.7
14 TraesCS2A01G357600 chr2B 92.662 1867 91 26 1629 3468 539703641 539705488 0.000000e+00 2647.0
15 TraesCS2A01G357600 chr2B 85.936 1742 179 46 2693 4403 198423863 198425569 0.000000e+00 1799.0
16 TraesCS2A01G357600 chr2B 88.290 965 79 19 3635 4582 539705500 539706447 0.000000e+00 1125.0
17 TraesCS2A01G357600 chr2B 88.348 575 39 4 4583 5145 539734742 539735300 0.000000e+00 665.0
18 TraesCS2A01G357600 chr2B 79.914 463 42 32 387 841 539702165 539702584 5.300000e-75 292.0
19 TraesCS2A01G357600 chr2B 78.936 451 41 31 1203 1605 539703100 539703544 1.930000e-64 257.0
20 TraesCS2A01G357600 chr2B 98.182 55 1 0 1008 1062 539702669 539702723 4.460000e-16 97.1
21 TraesCS2A01G357600 chr6B 86.084 1739 182 39 2693 4403 384178657 384180363 0.000000e+00 1816.0
22 TraesCS2A01G357600 chr6B 80.882 340 47 15 4 337 692779381 692779708 8.990000e-63 252.0
23 TraesCS2A01G357600 chrUn 86.186 999 110 16 1813 2797 17537384 17538368 0.000000e+00 1055.0
24 TraesCS2A01G357600 chrUn 86.727 776 70 14 2797 3552 17538422 17539184 0.000000e+00 832.0
25 TraesCS2A01G357600 chrUn 79.948 768 104 28 3650 4402 17539184 17539916 2.230000e-143 520.0
26 TraesCS2A01G357600 chrUn 80.705 539 97 5 4766 5300 101768279 101768814 3.900000e-111 412.0
27 TraesCS2A01G357600 chr5B 81.541 753 80 30 3372 4112 208767353 208766648 2.830000e-157 566.0
28 TraesCS2A01G357600 chr5B 80.204 490 90 5 4848 5333 466862510 466862024 1.430000e-95 361.0
29 TraesCS2A01G357600 chr5B 83.088 272 25 9 4149 4403 392491309 392491576 1.510000e-55 228.0
30 TraesCS2A01G357600 chr1B 90.560 339 16 2 1 323 249625664 249626002 8.320000e-118 435.0
31 TraesCS2A01G357600 chr1B 81.935 310 22 19 3404 3703 359604236 359604521 1.170000e-56 231.0
32 TraesCS2A01G357600 chr1A 89.349 338 21 1 1 323 225514063 225513726 1.400000e-110 411.0
33 TraesCS2A01G357600 chr1A 80.000 500 93 5 4848 5343 464870430 464869934 3.980000e-96 363.0
34 TraesCS2A01G357600 chr7D 89.118 340 21 9 1 324 582750720 582751059 5.040000e-110 409.0
35 TraesCS2A01G357600 chr7D 79.778 450 79 12 4766 5209 469578689 469579132 3.140000e-82 316.0
36 TraesCS2A01G357600 chr1D 89.318 337 21 1 2 323 169064846 169064510 5.040000e-110 409.0
37 TraesCS2A01G357600 chr4D 88.824 340 22 2 1 324 307245207 307245546 2.340000e-108 403.0
38 TraesCS2A01G357600 chr4D 88.529 340 23 9 1 324 83273832 83274171 1.090000e-106 398.0
39 TraesCS2A01G357600 chr4D 87.278 338 27 2 3 324 93144529 93144192 6.610000e-99 372.0
40 TraesCS2A01G357600 chr4D 78.000 600 111 12 4769 5363 87744094 87744677 1.850000e-94 357.0
41 TraesCS2A01G357600 chr3B 79.652 575 104 10 4766 5333 592881151 592881719 8.430000e-108 401.0
42 TraesCS2A01G357600 chr3B 85.824 261 27 7 4149 4403 284565746 284565490 8.930000e-68 268.0
43 TraesCS2A01G357600 chr6A 88.623 334 22 2 6 324 183267999 183268331 5.080000e-105 392.0
44 TraesCS2A01G357600 chr4A 87.870 338 19 8 1 323 279772317 279771987 1.420000e-100 377.0
45 TraesCS2A01G357600 chr4A 92.949 156 11 0 1 156 509221870 509221715 1.510000e-55 228.0
46 TraesCS2A01G357600 chr7A 81.075 465 83 3 4872 5333 458532362 458532824 3.080000e-97 366.0
47 TraesCS2A01G357600 chr7A 79.381 485 95 5 4852 5333 306270649 306270167 2.410000e-88 337.0
48 TraesCS2A01G357600 chr7B 82.875 327 39 9 1 320 644102187 644102503 1.480000e-70 278.0
49 TraesCS2A01G357600 chr7B 79.739 306 27 18 3404 3703 353971054 353971330 7.150000e-44 189.0
50 TraesCS2A01G357600 chr6D 90.361 83 5 2 1356 1435 2368257 2368339 7.410000e-19 106.0
51 TraesCS2A01G357600 chr3A 93.103 58 4 0 1379 1436 712302716 712302773 9.650000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G357600 chr2A 602120917 602126322 5405 False 9984.000000 9984 100.000000 1 5406 1 chr2A.!!$F1 5405
1 TraesCS2A01G357600 chr2A 277136389 277138919 2530 True 800.333333 1088 84.288333 1814 4402 3 chr2A.!!$R1 2588
2 TraesCS2A01G357600 chr2D 458732146 458735957 3811 False 1484.233333 4072 83.753667 666 4582 3 chr2D.!!$F4 3916
3 TraesCS2A01G357600 chr2D 206239618 206242145 2527 False 805.000000 1083 84.596333 1813 4396 3 chr2D.!!$F3 2583
4 TraesCS2A01G357600 chr2D 458745644 458746221 577 False 380.000000 593 90.003000 4583 5145 2 chr2D.!!$F5 562
5 TraesCS2A01G357600 chr2B 198423863 198425569 1706 False 1799.000000 1799 85.936000 2693 4403 1 chr2B.!!$F1 1710
6 TraesCS2A01G357600 chr2B 539702165 539706447 4282 False 883.620000 2647 87.596800 387 4582 5 chr2B.!!$F3 4195
7 TraesCS2A01G357600 chr2B 539734742 539735300 558 False 665.000000 665 88.348000 4583 5145 1 chr2B.!!$F2 562
8 TraesCS2A01G357600 chr6B 384178657 384180363 1706 False 1816.000000 1816 86.084000 2693 4403 1 chr6B.!!$F1 1710
9 TraesCS2A01G357600 chrUn 17537384 17539916 2532 False 802.333333 1055 84.287000 1813 4402 3 chrUn.!!$F2 2589
10 TraesCS2A01G357600 chrUn 101768279 101768814 535 False 412.000000 412 80.705000 4766 5300 1 chrUn.!!$F1 534
11 TraesCS2A01G357600 chr5B 208766648 208767353 705 True 566.000000 566 81.541000 3372 4112 1 chr5B.!!$R1 740
12 TraesCS2A01G357600 chr4D 87744094 87744677 583 False 357.000000 357 78.000000 4769 5363 1 chr4D.!!$F2 594
13 TraesCS2A01G357600 chr3B 592881151 592881719 568 False 401.000000 401 79.652000 4766 5333 1 chr3B.!!$F1 567

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
353 354 0.037975 GTCCTTCCGCCGAACTGTTA 60.038 55.0 0.00 0.0 0.00 2.41 F
649 656 0.177141 CCCCAATCTGCCAAGCAATG 59.823 55.0 0.00 0.0 38.41 2.82 F
1204 1460 0.673644 CTGACGCCGATCTGGGTTTT 60.674 55.0 8.22 0.0 38.63 2.43 F
1206 1462 0.953960 GACGCCGATCTGGGTTTTGT 60.954 55.0 8.22 0.0 38.63 2.83 F
2552 3012 1.041447 TCAGTAAGGGCCGCTAGGTC 61.041 60.0 0.00 0.0 42.75 3.85 F
4128 4706 0.181114 TGAATGATCCCTTCCCTGCG 59.819 55.0 0.00 0.0 0.00 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1990 2434 0.107459 CTGCTCCAAGGAGGGTAAGC 60.107 60.000 17.34 3.74 42.19 3.09 R
2534 2993 1.442148 GACCTAGCGGCCCTTACTG 59.558 63.158 0.00 0.00 0.00 2.74 R
2985 3510 1.303888 AATGGAGCACACAGGCCTG 60.304 57.895 31.60 31.60 0.00 4.85 R
3209 3735 1.305718 AGCCAGGAGAGGGAGTGAC 60.306 63.158 0.00 0.00 0.00 3.67 R
4137 4715 0.033504 ATACATGAACTAGCCGCGGG 59.966 55.000 29.38 13.36 0.00 6.13 R
5305 5932 0.108329 GGGCATCATCGGGGTATACG 60.108 60.000 0.00 0.00 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.496942 ACTAGCAATGTGCCCATGC 58.503 52.632 0.00 0.00 46.52 4.06
19 20 1.357690 CTAGCAATGTGCCCATGCG 59.642 57.895 0.00 0.00 46.52 4.73
20 21 1.378382 TAGCAATGTGCCCATGCGT 60.378 52.632 0.00 0.00 46.52 5.24
21 22 0.964860 TAGCAATGTGCCCATGCGTT 60.965 50.000 0.00 0.00 46.52 4.84
22 23 2.095847 GCAATGTGCCCATGCGTTG 61.096 57.895 0.00 0.00 41.78 4.10
23 24 2.095847 CAATGTGCCCATGCGTTGC 61.096 57.895 0.00 0.00 41.78 4.17
24 25 2.572149 AATGTGCCCATGCGTTGCA 61.572 52.632 0.00 0.00 44.86 4.08
25 26 2.097201 AATGTGCCCATGCGTTGCAA 62.097 50.000 0.00 0.00 43.62 4.08
26 27 2.734346 GTGCCCATGCGTTGCAAC 60.734 61.111 19.89 19.89 43.62 4.17
40 41 4.695217 GTTGCAACGGATCCAAAATAGA 57.305 40.909 14.90 0.00 0.00 1.98
41 42 5.054390 GTTGCAACGGATCCAAAATAGAA 57.946 39.130 14.90 0.00 0.00 2.10
42 43 5.650543 GTTGCAACGGATCCAAAATAGAAT 58.349 37.500 14.90 0.00 0.00 2.40
43 44 6.791303 GTTGCAACGGATCCAAAATAGAATA 58.209 36.000 14.90 0.00 0.00 1.75
44 45 7.254852 GTTGCAACGGATCCAAAATAGAATAA 58.745 34.615 14.90 0.00 0.00 1.40
45 46 7.581213 TGCAACGGATCCAAAATAGAATAAT 57.419 32.000 13.41 0.00 0.00 1.28
46 47 7.424803 TGCAACGGATCCAAAATAGAATAATG 58.575 34.615 13.41 0.00 0.00 1.90
47 48 6.363357 GCAACGGATCCAAAATAGAATAATGC 59.637 38.462 13.41 0.29 0.00 3.56
48 49 7.424803 CAACGGATCCAAAATAGAATAATGCA 58.575 34.615 13.41 0.00 0.00 3.96
49 50 7.765695 ACGGATCCAAAATAGAATAATGCAT 57.234 32.000 13.41 0.00 0.00 3.96
50 51 8.862325 ACGGATCCAAAATAGAATAATGCATA 57.138 30.769 13.41 0.00 0.00 3.14
51 52 9.466497 ACGGATCCAAAATAGAATAATGCATAT 57.534 29.630 13.41 0.00 0.00 1.78
69 70 9.504708 AATGCATATTCACAAATTTGGAAGAAA 57.495 25.926 21.74 12.56 30.48 2.52
70 71 8.899427 TGCATATTCACAAATTTGGAAGAAAA 57.101 26.923 21.74 7.23 0.00 2.29
71 72 8.772705 TGCATATTCACAAATTTGGAAGAAAAC 58.227 29.630 21.74 12.36 0.00 2.43
72 73 8.772705 GCATATTCACAAATTTGGAAGAAAACA 58.227 29.630 21.74 11.81 0.00 2.83
76 77 9.617523 ATTCACAAATTTGGAAGAAAACAATCT 57.382 25.926 21.74 4.43 0.00 2.40
78 79 9.748708 TCACAAATTTGGAAGAAAACAATCTAG 57.251 29.630 21.74 0.00 0.00 2.43
79 80 9.533253 CACAAATTTGGAAGAAAACAATCTAGT 57.467 29.630 21.74 0.00 0.00 2.57
139 140 9.087424 GTTTCAGTCAAAATATATTTCTTGGGC 57.913 33.333 11.08 3.95 0.00 5.36
140 141 8.593945 TTCAGTCAAAATATATTTCTTGGGCT 57.406 30.769 11.08 5.94 0.00 5.19
141 142 7.999679 TCAGTCAAAATATATTTCTTGGGCTG 58.000 34.615 11.08 15.61 0.00 4.85
142 143 7.615365 TCAGTCAAAATATATTTCTTGGGCTGT 59.385 33.333 20.78 2.36 0.00 4.40
143 144 8.253113 CAGTCAAAATATATTTCTTGGGCTGTT 58.747 33.333 11.08 0.00 0.00 3.16
144 145 8.815912 AGTCAAAATATATTTCTTGGGCTGTTT 58.184 29.630 11.08 0.00 0.00 2.83
145 146 9.435688 GTCAAAATATATTTCTTGGGCTGTTTT 57.564 29.630 11.08 0.00 0.00 2.43
146 147 9.434420 TCAAAATATATTTCTTGGGCTGTTTTG 57.566 29.630 11.08 2.76 35.37 2.44
147 148 9.434420 CAAAATATATTTCTTGGGCTGTTTTGA 57.566 29.630 11.08 0.00 35.82 2.69
150 151 9.603921 AATATATTTCTTGGGCTGTTTTGATTG 57.396 29.630 0.00 0.00 0.00 2.67
151 152 4.751767 TTTCTTGGGCTGTTTTGATTGT 57.248 36.364 0.00 0.00 0.00 2.71
152 153 3.731652 TCTTGGGCTGTTTTGATTGTG 57.268 42.857 0.00 0.00 0.00 3.33
153 154 2.364970 TCTTGGGCTGTTTTGATTGTGG 59.635 45.455 0.00 0.00 0.00 4.17
154 155 1.786937 TGGGCTGTTTTGATTGTGGT 58.213 45.000 0.00 0.00 0.00 4.16
155 156 2.114616 TGGGCTGTTTTGATTGTGGTT 58.885 42.857 0.00 0.00 0.00 3.67
156 157 2.503356 TGGGCTGTTTTGATTGTGGTTT 59.497 40.909 0.00 0.00 0.00 3.27
157 158 2.871633 GGGCTGTTTTGATTGTGGTTTG 59.128 45.455 0.00 0.00 0.00 2.93
158 159 3.530535 GGCTGTTTTGATTGTGGTTTGT 58.469 40.909 0.00 0.00 0.00 2.83
159 160 3.938334 GGCTGTTTTGATTGTGGTTTGTT 59.062 39.130 0.00 0.00 0.00 2.83
160 161 4.394610 GGCTGTTTTGATTGTGGTTTGTTT 59.605 37.500 0.00 0.00 0.00 2.83
161 162 5.106357 GGCTGTTTTGATTGTGGTTTGTTTT 60.106 36.000 0.00 0.00 0.00 2.43
162 163 6.092807 GGCTGTTTTGATTGTGGTTTGTTTTA 59.907 34.615 0.00 0.00 0.00 1.52
163 164 7.361286 GGCTGTTTTGATTGTGGTTTGTTTTAA 60.361 33.333 0.00 0.00 0.00 1.52
164 165 7.691877 GCTGTTTTGATTGTGGTTTGTTTTAAG 59.308 33.333 0.00 0.00 0.00 1.85
165 166 8.833231 TGTTTTGATTGTGGTTTGTTTTAAGA 57.167 26.923 0.00 0.00 0.00 2.10
166 167 9.442047 TGTTTTGATTGTGGTTTGTTTTAAGAT 57.558 25.926 0.00 0.00 0.00 2.40
174 175 8.398878 TGTGGTTTGTTTTAAGATACTAAGGG 57.601 34.615 0.00 0.00 0.00 3.95
175 176 7.449086 TGTGGTTTGTTTTAAGATACTAAGGGG 59.551 37.037 0.00 0.00 0.00 4.79
176 177 7.449395 GTGGTTTGTTTTAAGATACTAAGGGGT 59.551 37.037 0.00 0.00 0.00 4.95
177 178 8.667737 TGGTTTGTTTTAAGATACTAAGGGGTA 58.332 33.333 0.00 0.00 0.00 3.69
178 179 9.690913 GGTTTGTTTTAAGATACTAAGGGGTAT 57.309 33.333 0.00 0.00 35.39 2.73
193 194 8.383947 ACTAAGGGGTATTCTATAAATTGGAGC 58.616 37.037 0.00 0.00 0.00 4.70
194 195 6.780198 AGGGGTATTCTATAAATTGGAGCA 57.220 37.500 0.00 0.00 0.00 4.26
195 196 6.784031 AGGGGTATTCTATAAATTGGAGCAG 58.216 40.000 0.00 0.00 0.00 4.24
196 197 6.562608 AGGGGTATTCTATAAATTGGAGCAGA 59.437 38.462 0.00 0.00 0.00 4.26
197 198 6.881602 GGGGTATTCTATAAATTGGAGCAGAG 59.118 42.308 0.00 0.00 0.00 3.35
198 199 7.256691 GGGGTATTCTATAAATTGGAGCAGAGA 60.257 40.741 0.00 0.00 0.00 3.10
199 200 8.157476 GGGTATTCTATAAATTGGAGCAGAGAA 58.843 37.037 0.00 0.00 0.00 2.87
200 201 9.213799 GGTATTCTATAAATTGGAGCAGAGAAG 57.786 37.037 0.00 0.00 0.00 2.85
201 202 9.771534 GTATTCTATAAATTGGAGCAGAGAAGT 57.228 33.333 0.00 0.00 0.00 3.01
202 203 8.674263 ATTCTATAAATTGGAGCAGAGAAGTG 57.326 34.615 0.00 0.00 0.00 3.16
203 204 6.586344 TCTATAAATTGGAGCAGAGAAGTGG 58.414 40.000 0.00 0.00 0.00 4.00
204 205 2.503895 AATTGGAGCAGAGAAGTGGG 57.496 50.000 0.00 0.00 0.00 4.61
205 206 1.661463 ATTGGAGCAGAGAAGTGGGA 58.339 50.000 0.00 0.00 0.00 4.37
206 207 1.661463 TTGGAGCAGAGAAGTGGGAT 58.339 50.000 0.00 0.00 0.00 3.85
207 208 2.550277 TGGAGCAGAGAAGTGGGATA 57.450 50.000 0.00 0.00 0.00 2.59
208 209 3.051940 TGGAGCAGAGAAGTGGGATAT 57.948 47.619 0.00 0.00 0.00 1.63
209 210 3.387962 TGGAGCAGAGAAGTGGGATATT 58.612 45.455 0.00 0.00 0.00 1.28
210 211 3.135348 TGGAGCAGAGAAGTGGGATATTG 59.865 47.826 0.00 0.00 0.00 1.90
211 212 3.135530 GGAGCAGAGAAGTGGGATATTGT 59.864 47.826 0.00 0.00 0.00 2.71
212 213 4.384647 GGAGCAGAGAAGTGGGATATTGTT 60.385 45.833 0.00 0.00 0.00 2.83
213 214 4.521146 AGCAGAGAAGTGGGATATTGTTG 58.479 43.478 0.00 0.00 0.00 3.33
214 215 3.065925 GCAGAGAAGTGGGATATTGTTGC 59.934 47.826 0.00 0.00 0.00 4.17
215 216 3.310774 CAGAGAAGTGGGATATTGTTGCG 59.689 47.826 0.00 0.00 0.00 4.85
216 217 3.197766 AGAGAAGTGGGATATTGTTGCGA 59.802 43.478 0.00 0.00 0.00 5.10
217 218 3.938963 GAGAAGTGGGATATTGTTGCGAA 59.061 43.478 0.00 0.00 0.00 4.70
218 219 4.331968 AGAAGTGGGATATTGTTGCGAAA 58.668 39.130 0.00 0.00 0.00 3.46
219 220 4.764823 AGAAGTGGGATATTGTTGCGAAAA 59.235 37.500 0.00 0.00 0.00 2.29
220 221 4.701956 AGTGGGATATTGTTGCGAAAAG 57.298 40.909 0.00 0.00 0.00 2.27
221 222 3.443681 AGTGGGATATTGTTGCGAAAAGG 59.556 43.478 0.00 0.00 0.00 3.11
222 223 2.165437 TGGGATATTGTTGCGAAAAGGC 59.835 45.455 0.00 0.00 0.00 4.35
223 224 2.165437 GGGATATTGTTGCGAAAAGGCA 59.835 45.455 0.00 0.00 42.12 4.75
224 225 3.179048 GGATATTGTTGCGAAAAGGCAC 58.821 45.455 0.00 0.00 43.82 5.01
225 226 3.366883 GGATATTGTTGCGAAAAGGCACA 60.367 43.478 0.00 0.00 43.82 4.57
226 227 2.593346 ATTGTTGCGAAAAGGCACAA 57.407 40.000 0.00 5.50 43.82 3.33
227 228 1.919918 TTGTTGCGAAAAGGCACAAG 58.080 45.000 0.00 0.00 43.82 3.16
228 229 0.814457 TGTTGCGAAAAGGCACAAGT 59.186 45.000 0.00 0.00 43.82 3.16
229 230 1.203523 TGTTGCGAAAAGGCACAAGTT 59.796 42.857 0.00 0.00 43.82 2.66
230 231 2.423892 TGTTGCGAAAAGGCACAAGTTA 59.576 40.909 0.00 0.00 43.82 2.24
231 232 2.766970 TGCGAAAAGGCACAAGTTAC 57.233 45.000 0.00 0.00 38.17 2.50
232 233 2.017782 TGCGAAAAGGCACAAGTTACA 58.982 42.857 0.00 0.00 38.17 2.41
233 234 2.621055 TGCGAAAAGGCACAAGTTACAT 59.379 40.909 0.00 0.00 38.17 2.29
234 235 3.234386 GCGAAAAGGCACAAGTTACATC 58.766 45.455 0.00 0.00 0.00 3.06
235 236 3.304391 GCGAAAAGGCACAAGTTACATCA 60.304 43.478 0.00 0.00 0.00 3.07
236 237 4.219033 CGAAAAGGCACAAGTTACATCAC 58.781 43.478 0.00 0.00 0.00 3.06
237 238 3.896648 AAAGGCACAAGTTACATCACG 57.103 42.857 0.00 0.00 0.00 4.35
238 239 1.808411 AGGCACAAGTTACATCACGG 58.192 50.000 0.00 0.00 0.00 4.94
239 240 1.071699 AGGCACAAGTTACATCACGGT 59.928 47.619 0.00 0.00 0.00 4.83
240 241 1.463444 GGCACAAGTTACATCACGGTC 59.537 52.381 0.00 0.00 0.00 4.79
241 242 1.126113 GCACAAGTTACATCACGGTCG 59.874 52.381 0.00 0.00 0.00 4.79
242 243 2.400399 CACAAGTTACATCACGGTCGT 58.600 47.619 0.00 0.00 0.00 4.34
243 244 2.798283 CACAAGTTACATCACGGTCGTT 59.202 45.455 0.00 0.00 0.00 3.85
244 245 3.982701 CACAAGTTACATCACGGTCGTTA 59.017 43.478 0.00 0.00 0.00 3.18
245 246 4.089493 CACAAGTTACATCACGGTCGTTAG 59.911 45.833 0.00 0.00 0.00 2.34
246 247 4.022935 ACAAGTTACATCACGGTCGTTAGA 60.023 41.667 0.00 0.00 0.00 2.10
247 248 4.978083 AGTTACATCACGGTCGTTAGAT 57.022 40.909 0.00 0.00 0.00 1.98
248 249 4.669318 AGTTACATCACGGTCGTTAGATG 58.331 43.478 16.80 16.80 42.61 2.90
249 250 1.922570 ACATCACGGTCGTTAGATGC 58.077 50.000 17.75 0.00 41.08 3.91
250 251 1.203758 ACATCACGGTCGTTAGATGCA 59.796 47.619 17.75 0.00 41.08 3.96
251 252 1.854743 CATCACGGTCGTTAGATGCAG 59.145 52.381 9.68 0.00 32.47 4.41
252 253 1.170442 TCACGGTCGTTAGATGCAGA 58.830 50.000 0.00 0.00 0.00 4.26
253 254 1.749063 TCACGGTCGTTAGATGCAGAT 59.251 47.619 0.00 0.00 0.00 2.90
254 255 2.120232 CACGGTCGTTAGATGCAGATC 58.880 52.381 0.00 0.00 0.00 2.75
255 256 2.025155 ACGGTCGTTAGATGCAGATCT 58.975 47.619 0.00 0.00 42.03 2.75
256 257 2.223595 ACGGTCGTTAGATGCAGATCTG 60.224 50.000 18.84 18.84 39.44 2.90
257 258 2.748605 GGTCGTTAGATGCAGATCTGG 58.251 52.381 23.89 6.34 39.44 3.86
258 259 2.101582 GGTCGTTAGATGCAGATCTGGT 59.898 50.000 23.89 0.00 39.44 4.00
259 260 3.119291 GTCGTTAGATGCAGATCTGGTG 58.881 50.000 23.89 0.02 39.44 4.17
260 261 2.101415 TCGTTAGATGCAGATCTGGTGG 59.899 50.000 23.89 0.00 39.44 4.61
261 262 2.159043 CGTTAGATGCAGATCTGGTGGT 60.159 50.000 23.89 0.00 39.44 4.16
262 263 3.462021 GTTAGATGCAGATCTGGTGGTC 58.538 50.000 23.89 7.54 39.44 4.02
263 264 1.576577 AGATGCAGATCTGGTGGTCA 58.423 50.000 23.89 13.01 37.56 4.02
264 265 1.485480 AGATGCAGATCTGGTGGTCAG 59.515 52.381 23.89 0.00 44.68 3.51
273 274 1.442769 CTGGTGGTCAGAAATGACGG 58.557 55.000 2.56 0.00 46.18 4.79
274 275 1.001974 CTGGTGGTCAGAAATGACGGA 59.998 52.381 2.56 0.00 46.18 4.69
275 276 1.628340 TGGTGGTCAGAAATGACGGAT 59.372 47.619 2.56 0.00 39.57 4.18
276 277 2.009774 GGTGGTCAGAAATGACGGATG 58.990 52.381 2.56 0.00 39.57 3.51
277 278 2.354704 GGTGGTCAGAAATGACGGATGA 60.355 50.000 2.56 0.00 39.57 2.92
278 279 2.673368 GTGGTCAGAAATGACGGATGAC 59.327 50.000 2.56 0.00 39.57 3.06
279 280 2.301583 TGGTCAGAAATGACGGATGACA 59.698 45.455 6.04 0.00 41.58 3.58
280 281 2.932614 GGTCAGAAATGACGGATGACAG 59.067 50.000 6.04 0.00 41.58 3.51
281 282 3.368427 GGTCAGAAATGACGGATGACAGA 60.368 47.826 6.04 0.00 41.58 3.41
282 283 3.614616 GTCAGAAATGACGGATGACAGAC 59.385 47.826 0.00 0.00 39.97 3.51
283 284 3.258123 TCAGAAATGACGGATGACAGACA 59.742 43.478 0.00 0.00 0.00 3.41
284 285 4.081476 TCAGAAATGACGGATGACAGACAT 60.081 41.667 0.00 0.00 42.47 3.06
285 286 5.127031 TCAGAAATGACGGATGACAGACATA 59.873 40.000 0.00 0.00 39.56 2.29
286 287 5.233050 CAGAAATGACGGATGACAGACATAC 59.767 44.000 0.00 0.00 39.56 2.39
287 288 5.127845 AGAAATGACGGATGACAGACATACT 59.872 40.000 0.00 0.00 39.56 2.12
288 289 6.321435 AGAAATGACGGATGACAGACATACTA 59.679 38.462 0.00 0.00 39.56 1.82
289 290 6.656632 AATGACGGATGACAGACATACTAT 57.343 37.500 0.00 0.00 39.56 2.12
290 291 5.690997 TGACGGATGACAGACATACTATC 57.309 43.478 0.00 0.00 39.56 2.08
291 292 5.130350 TGACGGATGACAGACATACTATCA 58.870 41.667 0.00 0.00 39.56 2.15
292 293 5.770162 TGACGGATGACAGACATACTATCAT 59.230 40.000 0.00 0.00 44.25 2.45
300 301 8.753497 TGACAGACATACTATCATCACTAACT 57.247 34.615 0.00 0.00 26.01 2.24
301 302 8.624776 TGACAGACATACTATCATCACTAACTG 58.375 37.037 0.00 0.00 26.01 3.16
302 303 8.753497 ACAGACATACTATCATCACTAACTGA 57.247 34.615 0.00 0.00 0.00 3.41
303 304 8.845227 ACAGACATACTATCATCACTAACTGAG 58.155 37.037 0.00 0.00 30.20 3.35
304 305 8.845227 CAGACATACTATCATCACTAACTGAGT 58.155 37.037 0.00 0.00 39.82 3.41
305 306 9.062524 AGACATACTATCATCACTAACTGAGTC 57.937 37.037 0.00 0.00 35.64 3.36
306 307 8.988546 ACATACTATCATCACTAACTGAGTCT 57.011 34.615 0.00 0.00 35.64 3.24
307 308 9.415008 ACATACTATCATCACTAACTGAGTCTT 57.585 33.333 0.00 0.00 35.64 3.01
315 316 9.475620 TCATCACTAACTGAGTCTTTTATAGGA 57.524 33.333 0.00 0.00 35.64 2.94
316 317 9.743057 CATCACTAACTGAGTCTTTTATAGGAG 57.257 37.037 0.00 0.00 35.64 3.69
317 318 8.880991 TCACTAACTGAGTCTTTTATAGGAGT 57.119 34.615 0.00 0.00 35.64 3.85
318 319 9.970553 TCACTAACTGAGTCTTTTATAGGAGTA 57.029 33.333 0.00 0.00 35.64 2.59
323 324 9.930158 AACTGAGTCTTTTATAGGAGTAGAGAT 57.070 33.333 0.00 0.00 0.00 2.75
324 325 9.349713 ACTGAGTCTTTTATAGGAGTAGAGATG 57.650 37.037 0.00 0.00 0.00 2.90
325 326 9.567776 CTGAGTCTTTTATAGGAGTAGAGATGA 57.432 37.037 0.00 0.00 0.00 2.92
326 327 9.567776 TGAGTCTTTTATAGGAGTAGAGATGAG 57.432 37.037 0.00 0.00 0.00 2.90
327 328 9.787435 GAGTCTTTTATAGGAGTAGAGATGAGA 57.213 37.037 0.00 0.00 0.00 3.27
330 331 9.527157 TCTTTTATAGGAGTAGAGATGAGATGG 57.473 37.037 0.00 0.00 0.00 3.51
331 332 9.308000 CTTTTATAGGAGTAGAGATGAGATGGT 57.692 37.037 0.00 0.00 0.00 3.55
332 333 9.661954 TTTTATAGGAGTAGAGATGAGATGGTT 57.338 33.333 0.00 0.00 0.00 3.67
333 334 9.661954 TTTATAGGAGTAGAGATGAGATGGTTT 57.338 33.333 0.00 0.00 0.00 3.27
334 335 5.867903 AGGAGTAGAGATGAGATGGTTTG 57.132 43.478 0.00 0.00 0.00 2.93
335 336 5.276440 AGGAGTAGAGATGAGATGGTTTGT 58.724 41.667 0.00 0.00 0.00 2.83
336 337 5.362430 AGGAGTAGAGATGAGATGGTTTGTC 59.638 44.000 0.00 0.00 0.00 3.18
337 338 5.452636 GGAGTAGAGATGAGATGGTTTGTCC 60.453 48.000 0.00 0.00 0.00 4.02
338 339 5.276440 AGTAGAGATGAGATGGTTTGTCCT 58.724 41.667 0.00 0.00 37.07 3.85
339 340 5.723887 AGTAGAGATGAGATGGTTTGTCCTT 59.276 40.000 0.00 0.00 37.07 3.36
340 341 5.096443 AGAGATGAGATGGTTTGTCCTTC 57.904 43.478 0.00 0.00 39.71 3.46
341 342 4.080638 AGAGATGAGATGGTTTGTCCTTCC 60.081 45.833 0.00 0.00 40.11 3.46
342 343 2.472695 TGAGATGGTTTGTCCTTCCG 57.527 50.000 0.00 0.00 40.11 4.30
343 344 1.087501 GAGATGGTTTGTCCTTCCGC 58.912 55.000 0.00 0.00 40.11 5.54
344 345 0.322546 AGATGGTTTGTCCTTCCGCC 60.323 55.000 0.00 0.00 40.11 6.13
345 346 1.644786 GATGGTTTGTCCTTCCGCCG 61.645 60.000 0.00 0.00 35.21 6.46
346 347 2.031465 GGTTTGTCCTTCCGCCGA 59.969 61.111 0.00 0.00 0.00 5.54
347 348 1.598685 GGTTTGTCCTTCCGCCGAA 60.599 57.895 0.00 0.00 0.00 4.30
348 349 1.572941 GTTTGTCCTTCCGCCGAAC 59.427 57.895 0.00 0.00 0.00 3.95
349 350 0.883370 GTTTGTCCTTCCGCCGAACT 60.883 55.000 0.00 0.00 0.00 3.01
350 351 0.882927 TTTGTCCTTCCGCCGAACTG 60.883 55.000 0.00 0.00 0.00 3.16
351 352 2.035237 TTGTCCTTCCGCCGAACTGT 62.035 55.000 0.00 0.00 0.00 3.55
352 353 1.301479 GTCCTTCCGCCGAACTGTT 60.301 57.895 0.00 0.00 0.00 3.16
353 354 0.037975 GTCCTTCCGCCGAACTGTTA 60.038 55.000 0.00 0.00 0.00 2.41
354 355 0.899720 TCCTTCCGCCGAACTGTTAT 59.100 50.000 0.00 0.00 0.00 1.89
355 356 2.101783 TCCTTCCGCCGAACTGTTATA 58.898 47.619 0.00 0.00 0.00 0.98
356 357 2.496871 TCCTTCCGCCGAACTGTTATAA 59.503 45.455 0.00 0.00 0.00 0.98
357 358 3.133362 TCCTTCCGCCGAACTGTTATAAT 59.867 43.478 0.00 0.00 0.00 1.28
358 359 4.341806 TCCTTCCGCCGAACTGTTATAATA 59.658 41.667 0.00 0.00 0.00 0.98
359 360 4.684703 CCTTCCGCCGAACTGTTATAATAG 59.315 45.833 7.62 7.62 0.00 1.73
360 361 5.508489 CCTTCCGCCGAACTGTTATAATAGA 60.508 44.000 15.37 0.00 0.00 1.98
361 362 5.717078 TCCGCCGAACTGTTATAATAGAT 57.283 39.130 15.37 4.03 0.00 1.98
362 363 6.822667 TCCGCCGAACTGTTATAATAGATA 57.177 37.500 15.37 0.00 0.00 1.98
363 364 6.615088 TCCGCCGAACTGTTATAATAGATAC 58.385 40.000 15.37 5.85 0.00 2.24
364 365 5.510674 CCGCCGAACTGTTATAATAGATACG 59.489 44.000 15.37 14.81 0.00 3.06
365 366 6.309436 CGCCGAACTGTTATAATAGATACGA 58.691 40.000 15.37 0.00 0.00 3.43
366 367 6.965500 CGCCGAACTGTTATAATAGATACGAT 59.035 38.462 15.37 0.00 0.00 3.73
367 368 7.044901 CGCCGAACTGTTATAATAGATACGATG 60.045 40.741 15.37 9.07 0.00 3.84
368 369 7.253684 GCCGAACTGTTATAATAGATACGATGC 60.254 40.741 15.37 11.83 0.00 3.91
369 370 7.968956 CCGAACTGTTATAATAGATACGATGCT 59.031 37.037 15.37 0.00 0.00 3.79
370 371 9.343103 CGAACTGTTATAATAGATACGATGCTT 57.657 33.333 15.37 0.00 0.00 3.91
375 376 8.644619 TGTTATAATAGATACGATGCTTTTCGC 58.355 33.333 0.00 0.00 42.82 4.70
397 398 5.175126 CGCACGAAAATAGATAGTAAGGTGG 59.825 44.000 0.00 0.00 0.00 4.61
398 399 5.465724 GCACGAAAATAGATAGTAAGGTGGG 59.534 44.000 0.00 0.00 0.00 4.61
403 404 8.774586 CGAAAATAGATAGTAAGGTGGGAAATG 58.225 37.037 0.00 0.00 0.00 2.32
407 408 6.240549 AGATAGTAAGGTGGGAAATGTGAG 57.759 41.667 0.00 0.00 0.00 3.51
411 412 5.070685 AGTAAGGTGGGAAATGTGAGTTTC 58.929 41.667 0.00 0.00 37.37 2.78
417 418 4.389077 GTGGGAAATGTGAGTTTCTAGACG 59.611 45.833 0.00 0.00 38.02 4.18
423 424 8.381387 GGAAATGTGAGTTTCTAGACGATAAAC 58.619 37.037 0.00 0.00 38.02 2.01
424 425 8.827177 AAATGTGAGTTTCTAGACGATAAACA 57.173 30.769 6.94 2.45 35.93 2.83
427 428 8.462143 TGTGAGTTTCTAGACGATAAACATTC 57.538 34.615 6.94 0.00 35.93 2.67
485 486 2.417586 TCACACGTACAGGTACAGATCG 59.582 50.000 9.97 0.00 35.87 3.69
487 488 2.676839 ACACGTACAGGTACAGATCGAG 59.323 50.000 9.97 0.00 35.87 4.04
494 495 2.099756 CAGGTACAGATCGAGACATGCA 59.900 50.000 0.00 0.00 0.00 3.96
495 496 2.760650 AGGTACAGATCGAGACATGCAA 59.239 45.455 0.00 0.00 0.00 4.08
497 498 3.429547 GGTACAGATCGAGACATGCAAGT 60.430 47.826 0.00 0.00 0.00 3.16
498 499 2.614779 ACAGATCGAGACATGCAAGTG 58.385 47.619 0.00 0.00 0.00 3.16
499 500 1.326852 CAGATCGAGACATGCAAGTGC 59.673 52.381 0.00 0.00 42.50 4.40
500 501 0.299895 GATCGAGACATGCAAGTGCG 59.700 55.000 0.00 3.35 45.83 5.34
501 502 0.390340 ATCGAGACATGCAAGTGCGT 60.390 50.000 0.00 0.00 45.83 5.24
507 508 3.367743 ATGCAAGTGCGTGCCCTG 61.368 61.111 7.56 0.00 44.26 4.45
540 541 3.533606 AGTTTCTCTCGTGCATGCTAT 57.466 42.857 20.33 0.00 0.00 2.97
541 542 4.655762 AGTTTCTCTCGTGCATGCTATA 57.344 40.909 20.33 2.70 0.00 1.31
548 549 2.857748 CTCGTGCATGCTATACGTTGAA 59.142 45.455 23.23 8.05 38.80 2.69
557 558 7.585936 TGCATGCTATACGTTGAATTTTAATCG 59.414 33.333 20.33 0.00 0.00 3.34
586 587 1.007336 GGCCGTCGATACCGCATTAG 61.007 60.000 0.00 0.00 32.24 1.73
588 589 1.965083 CCGTCGATACCGCATTAGAG 58.035 55.000 0.00 0.00 35.37 2.43
590 591 1.069159 CGTCGATACCGCATTAGAGCT 60.069 52.381 0.00 0.00 35.37 4.09
591 592 2.604855 CGTCGATACCGCATTAGAGCTT 60.605 50.000 0.00 0.00 35.37 3.74
592 593 3.364664 CGTCGATACCGCATTAGAGCTTA 60.365 47.826 0.00 0.00 35.37 3.09
593 594 4.543692 GTCGATACCGCATTAGAGCTTAA 58.456 43.478 0.00 0.00 35.37 1.85
594 595 5.162075 GTCGATACCGCATTAGAGCTTAAT 58.838 41.667 0.00 0.00 35.37 1.40
596 597 5.048294 TCGATACCGCATTAGAGCTTAATCA 60.048 40.000 0.00 0.00 35.37 2.57
599 600 4.372656 ACCGCATTAGAGCTTAATCAGTC 58.627 43.478 0.00 0.00 0.00 3.51
601 602 5.302059 ACCGCATTAGAGCTTAATCAGTCTA 59.698 40.000 0.00 0.00 0.00 2.59
603 604 7.176865 ACCGCATTAGAGCTTAATCAGTCTATA 59.823 37.037 0.00 0.00 0.00 1.31
605 606 9.018716 CGCATTAGAGCTTAATCAGTCTATATG 57.981 37.037 0.00 0.00 0.00 1.78
622 629 6.018425 GTCTATATGACATGTCTGCAAGTTGG 60.018 42.308 25.55 8.01 44.73 3.77
625 632 3.138304 TGACATGTCTGCAAGTTGGTAC 58.862 45.455 25.55 0.00 33.76 3.34
633 640 0.960861 GCAAGTTGGTACTCAGCCCC 60.961 60.000 4.75 0.00 31.99 5.80
648 655 1.619807 GCCCCAATCTGCCAAGCAAT 61.620 55.000 0.00 0.00 38.41 3.56
649 656 0.177141 CCCCAATCTGCCAAGCAATG 59.823 55.000 0.00 0.00 38.41 2.82
651 658 1.551430 CCCAATCTGCCAAGCAATGAA 59.449 47.619 0.00 0.00 38.41 2.57
653 660 3.259064 CCAATCTGCCAAGCAATGAAAG 58.741 45.455 0.00 0.00 38.41 2.62
654 661 3.056393 CCAATCTGCCAAGCAATGAAAGA 60.056 43.478 0.00 0.00 38.41 2.52
655 662 3.863142 ATCTGCCAAGCAATGAAAGAC 57.137 42.857 0.00 0.00 38.41 3.01
656 663 1.536766 TCTGCCAAGCAATGAAAGACG 59.463 47.619 0.00 0.00 38.41 4.18
657 664 1.267806 CTGCCAAGCAATGAAAGACGT 59.732 47.619 0.00 0.00 38.41 4.34
658 665 1.001487 TGCCAAGCAATGAAAGACGTG 60.001 47.619 0.00 0.00 34.76 4.49
659 666 1.001378 GCCAAGCAATGAAAGACGTGT 60.001 47.619 0.00 0.00 0.00 4.49
660 667 2.225491 GCCAAGCAATGAAAGACGTGTA 59.775 45.455 0.00 0.00 0.00 2.90
661 668 3.810373 CCAAGCAATGAAAGACGTGTAC 58.190 45.455 0.00 0.00 0.00 2.90
664 671 2.038557 AGCAATGAAAGACGTGTACCCT 59.961 45.455 0.00 0.00 0.00 4.34
722 729 0.972717 CGTACGTGTACAGAGTTGCG 59.027 55.000 7.22 10.08 35.87 4.85
725 732 2.014554 CGTGTACAGAGTTGCGCGT 61.015 57.895 8.43 0.00 0.00 6.01
796 803 2.364842 GCCAGCTGGGGAGAGAGA 60.365 66.667 33.46 0.00 37.04 3.10
797 804 2.433994 GCCAGCTGGGGAGAGAGAG 61.434 68.421 33.46 4.87 37.04 3.20
798 805 1.761667 CCAGCTGGGGAGAGAGAGG 60.762 68.421 26.14 0.00 0.00 3.69
799 806 1.001503 CAGCTGGGGAGAGAGAGGT 59.998 63.158 5.57 0.00 0.00 3.85
836 843 3.131396 GTCGGCTGACAGAGAAAGAAAA 58.869 45.455 21.02 0.00 44.82 2.29
838 845 3.069586 TCGGCTGACAGAGAAAGAAAAGA 59.930 43.478 6.65 0.00 0.00 2.52
839 846 3.809832 CGGCTGACAGAGAAAGAAAAGAA 59.190 43.478 6.65 0.00 0.00 2.52
840 847 4.273480 CGGCTGACAGAGAAAGAAAAGAAA 59.727 41.667 6.65 0.00 0.00 2.52
841 848 5.559799 CGGCTGACAGAGAAAGAAAAGAAAG 60.560 44.000 6.65 0.00 0.00 2.62
842 849 5.529060 GGCTGACAGAGAAAGAAAAGAAAGA 59.471 40.000 6.65 0.00 0.00 2.52
843 850 6.038714 GGCTGACAGAGAAAGAAAAGAAAGAA 59.961 38.462 6.65 0.00 0.00 2.52
844 851 7.415653 GGCTGACAGAGAAAGAAAAGAAAGAAA 60.416 37.037 6.65 0.00 0.00 2.52
891 898 7.676004 TCCAGATGTGTATCTTCTGTGTAAAA 58.324 34.615 8.94 0.00 41.71 1.52
892 899 8.154203 TCCAGATGTGTATCTTCTGTGTAAAAA 58.846 33.333 8.94 0.00 41.71 1.94
896 903 9.209175 GATGTGTATCTTCTGTGTAAAAAGACT 57.791 33.333 0.00 0.00 0.00 3.24
952 959 4.212214 GCTTTCTCTCGCTCAAGAAAAGAA 59.788 41.667 0.00 0.00 40.09 2.52
1098 1130 4.749310 CGACGGAAGCTGCAGCCT 62.749 66.667 34.39 23.76 43.38 4.58
1099 1131 3.123620 GACGGAAGCTGCAGCCTG 61.124 66.667 34.39 25.74 43.38 4.85
1204 1460 0.673644 CTGACGCCGATCTGGGTTTT 60.674 55.000 8.22 0.00 38.63 2.43
1206 1462 0.953960 GACGCCGATCTGGGTTTTGT 60.954 55.000 8.22 0.00 38.63 2.83
1290 1546 2.492773 GGTGCTTGGTTGCTGCTGT 61.493 57.895 0.00 0.00 0.00 4.40
1291 1547 1.172180 GGTGCTTGGTTGCTGCTGTA 61.172 55.000 0.00 0.00 0.00 2.74
1296 1552 1.163420 TTGGTTGCTGCTGTACCGTG 61.163 55.000 0.00 0.00 34.62 4.94
1331 1589 4.828296 GAGGGGCCGAGGACCGTA 62.828 72.222 9.51 0.00 46.59 4.02
1505 1856 3.636300 GCTGCCTATCTCTTCTCTCTTGA 59.364 47.826 0.00 0.00 0.00 3.02
1520 1871 9.376075 CTTCTCTCTTGATACAGATTTTTGCTA 57.624 33.333 0.00 0.00 0.00 3.49
1525 1876 9.270640 CTCTTGATACAGATTTTTGCTAGCTAT 57.729 33.333 17.23 1.55 0.00 2.97
1553 1914 2.047061 TGGCTGGGTACATATCCTCAC 58.953 52.381 0.00 0.00 0.00 3.51
1570 1931 6.431198 TCCTCACAAGTACTGTTTGTTTTC 57.569 37.500 0.00 0.00 36.67 2.29
1571 1932 5.355910 TCCTCACAAGTACTGTTTGTTTTCC 59.644 40.000 0.00 0.00 36.67 3.13
1581 1945 4.764823 ACTGTTTGTTTTCCTGAGTTGACA 59.235 37.500 0.00 0.00 0.00 3.58
1620 1984 7.145985 TCAGTACTACATCAGTTTGTTGAGTC 58.854 38.462 0.00 0.00 38.80 3.36
1621 1985 7.014326 TCAGTACTACATCAGTTTGTTGAGTCT 59.986 37.037 0.00 0.00 38.80 3.24
1622 1986 7.653713 CAGTACTACATCAGTTTGTTGAGTCTT 59.346 37.037 0.00 0.00 38.80 3.01
1623 1987 8.857098 AGTACTACATCAGTTTGTTGAGTCTTA 58.143 33.333 0.00 0.00 38.80 2.10
1624 1988 9.130312 GTACTACATCAGTTTGTTGAGTCTTAG 57.870 37.037 0.00 0.00 38.80 2.18
1625 1989 7.727181 ACTACATCAGTTTGTTGAGTCTTAGT 58.273 34.615 0.00 0.00 31.59 2.24
1631 2067 4.409247 AGTTTGTTGAGTCTTAGTGAGGGT 59.591 41.667 0.00 0.00 0.00 4.34
1645 2081 4.151883 AGTGAGGGTAACACAAATGCAAT 58.848 39.130 0.00 0.00 40.25 3.56
1647 2083 5.070313 AGTGAGGGTAACACAAATGCAATTT 59.930 36.000 0.00 0.00 44.25 1.82
1648 2084 5.757808 GTGAGGGTAACACAAATGCAATTTT 59.242 36.000 0.00 0.00 41.28 1.82
1649 2085 5.988561 TGAGGGTAACACAAATGCAATTTTC 59.011 36.000 0.00 0.00 41.28 2.29
1650 2086 5.923204 AGGGTAACACAAATGCAATTTTCA 58.077 33.333 0.00 0.00 41.28 2.69
1652 2088 6.650390 AGGGTAACACAAATGCAATTTTCATC 59.350 34.615 0.00 0.00 41.28 2.92
1653 2089 6.650390 GGGTAACACAAATGCAATTTTCATCT 59.350 34.615 0.00 0.00 41.28 2.90
1654 2090 7.148590 GGGTAACACAAATGCAATTTTCATCTC 60.149 37.037 0.00 0.00 41.28 2.75
1655 2091 7.384660 GGTAACACAAATGCAATTTTCATCTCA 59.615 33.333 0.00 0.00 46.10 3.27
1701 2142 6.639632 AAAATATCGATGAGTGGATTTGGG 57.360 37.500 8.54 0.00 0.00 4.12
1702 2143 4.982241 ATATCGATGAGTGGATTTGGGT 57.018 40.909 8.54 0.00 0.00 4.51
1703 2144 6.433847 AATATCGATGAGTGGATTTGGGTA 57.566 37.500 8.54 0.00 0.00 3.69
1704 2145 4.982241 ATCGATGAGTGGATTTGGGTAT 57.018 40.909 0.00 0.00 0.00 2.73
1705 2146 4.771114 TCGATGAGTGGATTTGGGTATT 57.229 40.909 0.00 0.00 0.00 1.89
1706 2147 4.450976 TCGATGAGTGGATTTGGGTATTG 58.549 43.478 0.00 0.00 0.00 1.90
1707 2148 4.163268 TCGATGAGTGGATTTGGGTATTGA 59.837 41.667 0.00 0.00 0.00 2.57
1708 2149 4.512944 CGATGAGTGGATTTGGGTATTGAG 59.487 45.833 0.00 0.00 0.00 3.02
1709 2150 5.684704 GATGAGTGGATTTGGGTATTGAGA 58.315 41.667 0.00 0.00 0.00 3.27
1710 2151 5.715439 TGAGTGGATTTGGGTATTGAGAT 57.285 39.130 0.00 0.00 0.00 2.75
1711 2152 6.078456 TGAGTGGATTTGGGTATTGAGATT 57.922 37.500 0.00 0.00 0.00 2.40
1712 2153 6.122277 TGAGTGGATTTGGGTATTGAGATTC 58.878 40.000 0.00 0.00 0.00 2.52
1842 2283 6.595326 TGATCATACAAATCTTCACGCTCTTT 59.405 34.615 0.00 0.00 0.00 2.52
1856 2297 4.621034 CACGCTCTTTGTGTTTTGTTCTTT 59.379 37.500 0.00 0.00 37.28 2.52
2020 2464 1.406539 CTTGGAGCAGCTTGTTGTGTT 59.593 47.619 0.00 0.00 0.00 3.32
2324 2776 6.338214 TCAATTGTGCAGGTTATTGCTAAA 57.662 33.333 5.13 0.00 44.38 1.85
2423 2875 4.012374 TGCTTCATCATTCTTTCCCTGTC 58.988 43.478 0.00 0.00 0.00 3.51
2439 2891 3.055747 CCCTGTCTCTCTTTTCCTGGTAC 60.056 52.174 0.00 0.00 0.00 3.34
2453 2907 3.773119 TCCTGGTACATTCTTACACCCTC 59.227 47.826 0.00 0.00 38.20 4.30
2488 2942 7.275888 ACAGAAAGTTTGATGAATGTTGCTA 57.724 32.000 0.00 0.00 0.00 3.49
2500 2954 8.370182 TGATGAATGTTGCTATAATCTGCTCTA 58.630 33.333 0.00 0.00 0.00 2.43
2515 2969 7.814264 ATCTGCTCTAGAATTTTGGTAATGG 57.186 36.000 0.00 0.00 39.30 3.16
2517 2971 7.050377 TCTGCTCTAGAATTTTGGTAATGGAG 58.950 38.462 0.00 0.00 30.84 3.86
2521 2975 7.446106 TCTAGAATTTTGGTAATGGAGCCTA 57.554 36.000 0.00 0.00 0.00 3.93
2525 2984 7.283329 AGAATTTTGGTAATGGAGCCTACTAG 58.717 38.462 0.00 0.00 0.00 2.57
2534 2993 4.737855 TGGAGCCTACTAGTGACAAATC 57.262 45.455 5.39 0.00 0.00 2.17
2543 3002 4.833390 ACTAGTGACAAATCAGTAAGGGC 58.167 43.478 0.00 0.00 39.72 5.19
2544 3004 3.073274 AGTGACAAATCAGTAAGGGCC 57.927 47.619 0.00 0.00 36.69 5.80
2545 3005 1.737793 GTGACAAATCAGTAAGGGCCG 59.262 52.381 0.00 0.00 34.75 6.13
2552 3012 1.041447 TCAGTAAGGGCCGCTAGGTC 61.041 60.000 0.00 0.00 42.75 3.85
2574 3034 4.101430 TCCATACCCATACCGAACCTTTAC 59.899 45.833 0.00 0.00 0.00 2.01
2601 3062 1.469703 TGAAGGATGCTGCATTGTTCG 59.530 47.619 17.36 0.00 0.00 3.95
2810 3329 4.399934 TGACGTTGTCCTGCATATGTAGTA 59.600 41.667 18.08 0.90 0.00 1.82
2853 3373 5.451354 TGTTAGTTAAGGCTTTTCACCCTT 58.549 37.500 4.45 0.00 43.54 3.95
2985 3510 3.123050 GACCTGGCAATTTGTTGTTGTC 58.877 45.455 0.00 0.00 0.00 3.18
3208 3734 4.780021 TCTTCTTCTCTTTCTGGCAGGTAT 59.220 41.667 15.73 0.00 0.00 2.73
3209 3735 4.478206 TCTTCTCTTTCTGGCAGGTATG 57.522 45.455 15.73 5.95 0.00 2.39
3215 3743 3.055819 TCTTTCTGGCAGGTATGTCACTC 60.056 47.826 15.73 0.00 35.69 3.51
3303 3836 8.959548 TGTGTCTGAATGCTATTGATGTAATTT 58.040 29.630 0.00 0.00 0.00 1.82
3317 3850 8.864069 TTGATGTAATTTTACACCAGTTTGTG 57.136 30.769 5.34 0.00 45.47 3.33
3333 3866 0.240678 TGTGTTCATGGTTGCATCGC 59.759 50.000 0.00 0.00 0.00 4.58
3433 3970 5.575606 CGATGATTTTGCATGAAGCTTCTTT 59.424 36.000 26.09 11.83 45.94 2.52
3435 3972 7.359765 CGATGATTTTGCATGAAGCTTCTTTTT 60.360 33.333 26.09 6.95 45.94 1.94
3464 4002 7.178983 ACTCATTCTTTGGATTTTTCCAGCATA 59.821 33.333 0.00 0.00 41.35 3.14
3597 4150 4.547406 AAGGTCGCAAAGAAACAACTAC 57.453 40.909 0.00 0.00 0.00 2.73
3609 4162 4.041691 AGAAACAACTACACATGGCTACCT 59.958 41.667 0.00 0.00 0.00 3.08
3611 4164 3.674997 ACAACTACACATGGCTACCTTG 58.325 45.455 0.00 0.00 35.21 3.61
3612 4165 3.072476 ACAACTACACATGGCTACCTTGT 59.928 43.478 0.00 0.00 41.60 3.16
3614 4167 2.094182 ACTACACATGGCTACCTTGTCG 60.094 50.000 0.00 2.58 39.41 4.35
3615 4168 0.685097 ACACATGGCTACCTTGTCGT 59.315 50.000 0.00 3.09 39.41 4.34
3616 4169 1.078709 CACATGGCTACCTTGTCGTG 58.921 55.000 0.00 0.00 39.41 4.35
3617 4170 0.973632 ACATGGCTACCTTGTCGTGA 59.026 50.000 0.00 0.00 37.33 4.35
3621 4174 2.489971 TGGCTACCTTGTCGTGAAAAG 58.510 47.619 0.00 0.00 0.00 2.27
3801 4360 4.989279 AATTTGCAATCCTTCGCTGTAT 57.011 36.364 0.00 0.00 0.00 2.29
3810 4369 6.238484 GCAATCCTTCGCTGTATGAAACTAAT 60.238 38.462 0.00 0.00 0.00 1.73
4029 4597 5.368145 TCTTGATTATCCTGGAAATGGTCG 58.632 41.667 0.00 0.00 0.00 4.79
4119 4687 6.683974 TCGAGAAGAAAAATGAATGATCCC 57.316 37.500 0.00 0.00 0.00 3.85
4120 4688 6.418101 TCGAGAAGAAAAATGAATGATCCCT 58.582 36.000 0.00 0.00 0.00 4.20
4122 4690 7.066284 TCGAGAAGAAAAATGAATGATCCCTTC 59.934 37.037 0.00 0.00 0.00 3.46
4124 4692 6.382282 AGAAGAAAAATGAATGATCCCTTCCC 59.618 38.462 0.00 0.00 0.00 3.97
4128 4706 0.181114 TGAATGATCCCTTCCCTGCG 59.819 55.000 0.00 0.00 0.00 5.18
4129 4707 0.536006 GAATGATCCCTTCCCTGCGG 60.536 60.000 0.00 0.00 0.00 5.69
4241 4819 0.677842 GGACACGTGTAGAGTGGGTT 59.322 55.000 23.44 0.00 43.41 4.11
4325 4914 2.946564 TGTTATCGTGCTGTGAGACTG 58.053 47.619 0.00 0.00 0.00 3.51
4327 4916 3.504520 TGTTATCGTGCTGTGAGACTGTA 59.495 43.478 0.00 0.00 0.00 2.74
4373 4965 1.546998 GGGTTTCCCACTCCGAATTGT 60.547 52.381 0.00 0.00 44.65 2.71
4386 4978 5.411669 ACTCCGAATTGTGTCCAGAATAAAC 59.588 40.000 0.00 0.00 0.00 2.01
4389 4981 4.412207 GAATTGTGTCCAGAATAAACGGC 58.588 43.478 0.00 0.00 0.00 5.68
4404 4996 3.680786 GGCGGTTTCCTGTTGCCC 61.681 66.667 0.00 0.00 39.83 5.36
4405 4997 3.680786 GCGGTTTCCTGTTGCCCC 61.681 66.667 0.00 0.00 0.00 5.80
4406 4998 2.203422 CGGTTTCCTGTTGCCCCA 60.203 61.111 0.00 0.00 0.00 4.96
4413 5005 0.703488 TCCTGTTGCCCCAATCATCA 59.297 50.000 0.00 0.00 0.00 3.07
4414 5006 1.288633 TCCTGTTGCCCCAATCATCAT 59.711 47.619 0.00 0.00 0.00 2.45
4419 5011 3.023119 GTTGCCCCAATCATCATGTGTA 58.977 45.455 0.00 0.00 0.00 2.90
4420 5012 2.934887 TGCCCCAATCATCATGTGTAG 58.065 47.619 0.00 0.00 0.00 2.74
4447 5039 8.684386 TGTATGATTGTTCCAAAACTTGTCTA 57.316 30.769 0.00 0.00 36.30 2.59
4450 5042 8.871686 ATGATTGTTCCAAAACTTGTCTAAAC 57.128 30.769 0.00 0.00 36.30 2.01
4470 5062 6.974932 AAACTTATCACAGTGCTATGAGTG 57.025 37.500 0.00 0.00 0.00 3.51
4497 5089 3.683365 AGTTTTGGATGGCCATTGTTC 57.317 42.857 21.84 7.73 45.46 3.18
4499 5091 3.647590 AGTTTTGGATGGCCATTGTTCTT 59.352 39.130 21.84 0.00 45.46 2.52
4511 5103 4.751098 GCCATTGTTCTTGCATTTTTCTGA 59.249 37.500 0.00 0.00 0.00 3.27
4512 5104 5.107220 GCCATTGTTCTTGCATTTTTCTGAG 60.107 40.000 0.00 0.00 0.00 3.35
4513 5105 6.218019 CCATTGTTCTTGCATTTTTCTGAGA 58.782 36.000 0.00 0.00 0.00 3.27
4514 5106 6.145048 CCATTGTTCTTGCATTTTTCTGAGAC 59.855 38.462 0.00 0.00 0.00 3.36
4515 5107 6.455360 TTGTTCTTGCATTTTTCTGAGACT 57.545 33.333 0.00 0.00 0.00 3.24
4516 5108 5.824429 TGTTCTTGCATTTTTCTGAGACTG 58.176 37.500 0.00 0.00 0.00 3.51
4517 5109 4.494350 TCTTGCATTTTTCTGAGACTGC 57.506 40.909 0.00 0.00 0.00 4.40
4518 5110 2.975410 TGCATTTTTCTGAGACTGCG 57.025 45.000 0.00 0.00 32.42 5.18
4519 5111 1.069022 TGCATTTTTCTGAGACTGCGC 60.069 47.619 0.00 0.00 32.42 6.09
4520 5112 1.069022 GCATTTTTCTGAGACTGCGCA 60.069 47.619 10.98 10.98 0.00 6.09
4521 5113 2.605338 GCATTTTTCTGAGACTGCGCAA 60.605 45.455 13.05 0.00 0.00 4.85
4523 5115 1.953559 TTTTCTGAGACTGCGCAAGT 58.046 45.000 13.05 12.11 43.85 3.16
4524 5116 1.220529 TTTCTGAGACTGCGCAAGTG 58.779 50.000 13.05 1.71 40.07 3.16
4526 5118 0.389025 TCTGAGACTGCGCAAGTGAA 59.611 50.000 13.05 0.00 40.07 3.18
4538 5132 1.819305 GCAAGTGAAGAAAGGGGAGCA 60.819 52.381 0.00 0.00 0.00 4.26
4540 5134 0.035458 AGTGAAGAAAGGGGAGCACG 59.965 55.000 0.00 0.00 0.00 5.34
4541 5135 0.955919 GTGAAGAAAGGGGAGCACGG 60.956 60.000 0.00 0.00 0.00 4.94
4622 5216 8.970691 ACGAATTAATCCTTCATTTTGAGTTG 57.029 30.769 0.00 0.00 0.00 3.16
4623 5217 8.576442 ACGAATTAATCCTTCATTTTGAGTTGT 58.424 29.630 0.00 0.00 0.00 3.32
4624 5218 9.065871 CGAATTAATCCTTCATTTTGAGTTGTC 57.934 33.333 0.00 0.00 0.00 3.18
4628 5222 7.587037 AATCCTTCATTTTGAGTTGTCTTCA 57.413 32.000 0.00 0.00 0.00 3.02
4629 5223 6.377327 TCCTTCATTTTGAGTTGTCTTCAC 57.623 37.500 0.00 0.00 0.00 3.18
4630 5224 5.885352 TCCTTCATTTTGAGTTGTCTTCACA 59.115 36.000 0.00 0.00 0.00 3.58
4631 5225 6.547141 TCCTTCATTTTGAGTTGTCTTCACAT 59.453 34.615 0.00 0.00 30.55 3.21
4632 5226 7.719193 TCCTTCATTTTGAGTTGTCTTCACATA 59.281 33.333 0.00 0.00 30.55 2.29
4633 5227 8.517878 CCTTCATTTTGAGTTGTCTTCACATAT 58.482 33.333 0.00 0.00 30.55 1.78
4671 5265 6.636562 TCTAGTATAAGTACTTCCAGCTGC 57.363 41.667 12.39 0.00 41.35 5.25
4711 5305 4.750598 AGAAGTTGAGCGTTAGTTTCCTTC 59.249 41.667 0.00 0.00 0.00 3.46
4736 5360 4.452114 GCATTATCTCTTGTGTGTGTGTGA 59.548 41.667 0.00 0.00 0.00 3.58
4743 5367 5.065090 TCTCTTGTGTGTGTGTGAATTGAAG 59.935 40.000 0.00 0.00 0.00 3.02
4754 5378 3.073798 TGTGAATTGAAGGGCTTGTCCTA 59.926 43.478 0.00 0.00 35.80 2.94
4779 5403 5.725551 TCCATATAGGATTGGGTTGTGTT 57.274 39.130 0.00 0.00 43.07 3.32
4813 5437 6.072838 CCAAGCTAGTTATCCAGTGCAATATG 60.073 42.308 0.00 0.00 0.00 1.78
4827 5451 7.370383 CAGTGCAATATGTTTAGGAGTGTTTT 58.630 34.615 0.00 0.00 0.00 2.43
4862 5486 4.587262 TGCCACTTGAGAGAGTTAGTTGTA 59.413 41.667 0.00 0.00 0.00 2.41
4866 5490 7.523380 GCCACTTGAGAGAGTTAGTTGTACTTA 60.523 40.741 0.00 0.00 0.00 2.24
4914 5538 4.329545 GTCTCAGCGGCACCCCAA 62.330 66.667 1.45 0.00 0.00 4.12
4916 5540 2.597217 CTCAGCGGCACCCCAAAA 60.597 61.111 1.45 0.00 0.00 2.44
4924 5548 1.047801 GGCACCCCAAAACATCTTGT 58.952 50.000 0.00 0.00 0.00 3.16
4972 5596 7.206687 TGGTACTATTTTTGTTTTCTTGCTGG 58.793 34.615 0.00 0.00 0.00 4.85
5083 5707 2.104792 ACCACTTCCCATGTATGATCCG 59.895 50.000 0.00 0.00 0.00 4.18
5090 5714 3.141398 CCCATGTATGATCCGAGTTTGG 58.859 50.000 0.00 0.00 0.00 3.28
5099 5723 1.964373 CCGAGTTTGGAACCCACCG 60.964 63.158 0.00 0.00 30.78 4.94
5145 5771 4.038763 ACGAGAGTATGTTGAACAAGGTGA 59.961 41.667 0.62 0.00 46.88 4.02
5149 5775 6.591935 AGAGTATGTTGAACAAGGTGAAGAA 58.408 36.000 0.62 0.00 0.00 2.52
5154 5780 0.110644 GAACAAGGTGAAGAAGCGCG 60.111 55.000 0.00 0.00 0.00 6.86
5156 5782 1.222115 ACAAGGTGAAGAAGCGCGTC 61.222 55.000 15.94 15.94 0.00 5.19
5157 5783 1.069090 AAGGTGAAGAAGCGCGTCA 59.931 52.632 24.95 13.35 32.45 4.35
5177 5803 1.292541 GACCGTGGAGACCAACCTC 59.707 63.158 0.00 0.00 34.18 3.85
5178 5804 1.458777 ACCGTGGAGACCAACCTCA 60.459 57.895 0.00 0.00 34.18 3.86
5235 5862 2.693591 CGAAGTAGGCTTCTACATGGGA 59.306 50.000 0.00 0.00 46.65 4.37
5255 5882 0.955905 TCGACATCGACAACTCCACA 59.044 50.000 0.00 0.00 44.22 4.17
5259 5886 3.131396 GACATCGACAACTCCACAAACT 58.869 45.455 0.00 0.00 0.00 2.66
5260 5887 4.304110 GACATCGACAACTCCACAAACTA 58.696 43.478 0.00 0.00 0.00 2.24
5264 5891 2.221055 CGACAACTCCACAAACTACAGC 59.779 50.000 0.00 0.00 0.00 4.40
5300 5927 0.462759 GGAGGGAAATGGAGAGCACG 60.463 60.000 0.00 0.00 0.00 5.34
5301 5928 1.078143 AGGGAAATGGAGAGCACGC 60.078 57.895 0.00 0.00 0.00 5.34
5302 5929 2.464459 GGGAAATGGAGAGCACGCG 61.464 63.158 3.53 3.53 0.00 6.01
5305 5932 2.568935 GAAATGGAGAGCACGCGCAC 62.569 60.000 5.73 0.00 42.27 5.34
5323 5950 0.606604 ACGTATACCCCGATGATGCC 59.393 55.000 0.00 0.00 0.00 4.40
5333 5960 1.406069 CCGATGATGCCCATAGCTACC 60.406 57.143 0.00 0.00 44.23 3.18
5335 5962 2.093288 CGATGATGCCCATAGCTACCAT 60.093 50.000 0.00 0.00 44.23 3.55
5336 5963 3.132824 CGATGATGCCCATAGCTACCATA 59.867 47.826 0.00 0.00 44.23 2.74
5343 5970 3.833070 GCCCATAGCTACCATACTACACT 59.167 47.826 0.00 0.00 38.99 3.55
5345 5972 5.657302 GCCCATAGCTACCATACTACACTAT 59.343 44.000 0.00 0.00 38.99 2.12
5347 5974 6.321690 CCCATAGCTACCATACTACACTATCC 59.678 46.154 0.00 0.00 0.00 2.59
5349 5976 5.335028 AGCTACCATACTACACTATCCCA 57.665 43.478 0.00 0.00 0.00 4.37
5352 5979 5.303589 GCTACCATACTACACTATCCCAACA 59.696 44.000 0.00 0.00 0.00 3.33
5358 5985 3.774766 ACTACACTATCCCAACATGCTCA 59.225 43.478 0.00 0.00 0.00 4.26
5363 5990 0.323725 ATCCCAACATGCTCACCACC 60.324 55.000 0.00 0.00 0.00 4.61
5364 5991 1.228521 CCCAACATGCTCACCACCA 60.229 57.895 0.00 0.00 0.00 4.17
5365 5992 0.827089 CCCAACATGCTCACCACCAA 60.827 55.000 0.00 0.00 0.00 3.67
5366 5993 0.314935 CCAACATGCTCACCACCAAC 59.685 55.000 0.00 0.00 0.00 3.77
5367 5994 1.031235 CAACATGCTCACCACCAACA 58.969 50.000 0.00 0.00 0.00 3.33
5368 5995 1.408340 CAACATGCTCACCACCAACAA 59.592 47.619 0.00 0.00 0.00 2.83
5369 5996 1.032014 ACATGCTCACCACCAACAAC 58.968 50.000 0.00 0.00 0.00 3.32
5370 5997 1.031235 CATGCTCACCACCAACAACA 58.969 50.000 0.00 0.00 0.00 3.33
5371 5998 1.408340 CATGCTCACCACCAACAACAA 59.592 47.619 0.00 0.00 0.00 2.83
5372 5999 1.102154 TGCTCACCACCAACAACAAG 58.898 50.000 0.00 0.00 0.00 3.16
5373 6000 1.340502 TGCTCACCACCAACAACAAGA 60.341 47.619 0.00 0.00 0.00 3.02
5374 6001 1.956477 GCTCACCACCAACAACAAGAT 59.044 47.619 0.00 0.00 0.00 2.40
5375 6002 2.287788 GCTCACCACCAACAACAAGATG 60.288 50.000 0.00 0.00 0.00 2.90
5376 6003 2.951642 CTCACCACCAACAACAAGATGT 59.048 45.455 0.00 0.00 34.24 3.06
5377 6004 3.360867 TCACCACCAACAACAAGATGTT 58.639 40.909 0.00 0.00 44.08 2.71
5401 6028 2.083715 GGAACCACAATCTCCCCCA 58.916 57.895 0.00 0.00 0.00 4.96
5402 6029 0.323451 GGAACCACAATCTCCCCCAC 60.323 60.000 0.00 0.00 0.00 4.61
5403 6030 0.676782 GAACCACAATCTCCCCCACG 60.677 60.000 0.00 0.00 0.00 4.94
5404 6031 1.131303 AACCACAATCTCCCCCACGA 61.131 55.000 0.00 0.00 0.00 4.35
5405 6032 1.221840 CCACAATCTCCCCCACGAG 59.778 63.158 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.378882 CGCATGGGCACATTGCTAGT 61.379 55.000 17.42 0.00 44.28 2.57
1 2 1.357690 CGCATGGGCACATTGCTAG 59.642 57.895 17.42 0.95 44.28 3.42
2 3 0.964860 AACGCATGGGCACATTGCTA 60.965 50.000 17.42 0.00 44.28 3.49
3 4 2.277591 AACGCATGGGCACATTGCT 61.278 52.632 17.42 5.93 44.28 3.91
4 5 2.095847 CAACGCATGGGCACATTGC 61.096 57.895 10.10 5.97 44.08 3.56
5 6 2.095847 GCAACGCATGGGCACATTG 61.096 57.895 10.10 7.97 41.24 2.82
6 7 2.097201 TTGCAACGCATGGGCACATT 62.097 50.000 10.10 0.00 38.76 2.71
7 8 2.572149 TTGCAACGCATGGGCACAT 61.572 52.632 10.10 0.00 38.76 3.21
8 9 3.222121 TTGCAACGCATGGGCACA 61.222 55.556 10.10 0.00 38.76 4.57
9 10 2.734346 GTTGCAACGCATGGGCAC 60.734 61.111 14.90 0.00 38.76 5.01
10 11 4.340019 CGTTGCAACGCATGGGCA 62.340 61.111 35.89 0.00 46.06 5.36
19 20 4.695217 TCTATTTTGGATCCGTTGCAAC 57.305 40.909 19.89 19.89 35.14 4.17
20 21 5.913137 ATTCTATTTTGGATCCGTTGCAA 57.087 34.783 7.39 0.00 33.34 4.08
21 22 7.424803 CATTATTCTATTTTGGATCCGTTGCA 58.575 34.615 7.39 0.00 0.00 4.08
22 23 6.363357 GCATTATTCTATTTTGGATCCGTTGC 59.637 38.462 7.39 0.00 0.00 4.17
23 24 7.424803 TGCATTATTCTATTTTGGATCCGTTG 58.575 34.615 7.39 0.00 0.00 4.10
24 25 7.581213 TGCATTATTCTATTTTGGATCCGTT 57.419 32.000 7.39 0.00 0.00 4.44
25 26 7.765695 ATGCATTATTCTATTTTGGATCCGT 57.234 32.000 7.39 0.00 0.00 4.69
43 44 9.504708 TTTCTTCCAAATTTGTGAATATGCATT 57.495 25.926 16.73 0.00 0.00 3.56
44 45 9.504708 TTTTCTTCCAAATTTGTGAATATGCAT 57.495 25.926 16.73 3.79 0.00 3.96
45 46 8.772705 GTTTTCTTCCAAATTTGTGAATATGCA 58.227 29.630 16.73 0.00 0.00 3.96
46 47 8.772705 TGTTTTCTTCCAAATTTGTGAATATGC 58.227 29.630 16.73 9.36 0.00 3.14
50 51 9.617523 AGATTGTTTTCTTCCAAATTTGTGAAT 57.382 25.926 16.73 3.81 0.00 2.57
52 53 9.748708 CTAGATTGTTTTCTTCCAAATTTGTGA 57.251 29.630 16.73 10.66 0.00 3.58
53 54 9.533253 ACTAGATTGTTTTCTTCCAAATTTGTG 57.467 29.630 16.73 8.58 0.00 3.33
113 114 9.087424 GCCCAAGAAATATATTTTGACTGAAAC 57.913 33.333 11.92 0.00 0.00 2.78
114 115 9.034800 AGCCCAAGAAATATATTTTGACTGAAA 57.965 29.630 11.92 0.00 0.00 2.69
115 116 8.469200 CAGCCCAAGAAATATATTTTGACTGAA 58.531 33.333 11.92 0.00 0.00 3.02
116 117 7.615365 ACAGCCCAAGAAATATATTTTGACTGA 59.385 33.333 23.06 0.00 0.00 3.41
117 118 7.775120 ACAGCCCAAGAAATATATTTTGACTG 58.225 34.615 11.92 16.59 0.00 3.51
118 119 7.961326 ACAGCCCAAGAAATATATTTTGACT 57.039 32.000 11.92 2.55 0.00 3.41
119 120 9.435688 AAAACAGCCCAAGAAATATATTTTGAC 57.564 29.630 11.92 0.28 0.00 3.18
120 121 9.434420 CAAAACAGCCCAAGAAATATATTTTGA 57.566 29.630 11.92 0.00 36.08 2.69
121 122 9.434420 TCAAAACAGCCCAAGAAATATATTTTG 57.566 29.630 11.92 7.40 35.60 2.44
124 125 9.603921 CAATCAAAACAGCCCAAGAAATATATT 57.396 29.630 0.00 0.00 0.00 1.28
125 126 8.761689 ACAATCAAAACAGCCCAAGAAATATAT 58.238 29.630 0.00 0.00 0.00 0.86
126 127 8.034215 CACAATCAAAACAGCCCAAGAAATATA 58.966 33.333 0.00 0.00 0.00 0.86
127 128 6.875195 CACAATCAAAACAGCCCAAGAAATAT 59.125 34.615 0.00 0.00 0.00 1.28
128 129 6.222389 CACAATCAAAACAGCCCAAGAAATA 58.778 36.000 0.00 0.00 0.00 1.40
129 130 5.058490 CACAATCAAAACAGCCCAAGAAAT 58.942 37.500 0.00 0.00 0.00 2.17
130 131 4.440880 CACAATCAAAACAGCCCAAGAAA 58.559 39.130 0.00 0.00 0.00 2.52
131 132 3.181467 CCACAATCAAAACAGCCCAAGAA 60.181 43.478 0.00 0.00 0.00 2.52
132 133 2.364970 CCACAATCAAAACAGCCCAAGA 59.635 45.455 0.00 0.00 0.00 3.02
133 134 2.102925 ACCACAATCAAAACAGCCCAAG 59.897 45.455 0.00 0.00 0.00 3.61
134 135 2.114616 ACCACAATCAAAACAGCCCAA 58.885 42.857 0.00 0.00 0.00 4.12
135 136 1.786937 ACCACAATCAAAACAGCCCA 58.213 45.000 0.00 0.00 0.00 5.36
136 137 2.871633 CAAACCACAATCAAAACAGCCC 59.128 45.455 0.00 0.00 0.00 5.19
137 138 3.530535 ACAAACCACAATCAAAACAGCC 58.469 40.909 0.00 0.00 0.00 4.85
138 139 5.544136 AAACAAACCACAATCAAAACAGC 57.456 34.783 0.00 0.00 0.00 4.40
139 140 8.930760 TCTTAAAACAAACCACAATCAAAACAG 58.069 29.630 0.00 0.00 0.00 3.16
140 141 8.833231 TCTTAAAACAAACCACAATCAAAACA 57.167 26.923 0.00 0.00 0.00 2.83
148 149 8.852135 CCCTTAGTATCTTAAAACAAACCACAA 58.148 33.333 0.00 0.00 0.00 3.33
149 150 7.449086 CCCCTTAGTATCTTAAAACAAACCACA 59.551 37.037 0.00 0.00 0.00 4.17
150 151 7.449395 ACCCCTTAGTATCTTAAAACAAACCAC 59.551 37.037 0.00 0.00 0.00 4.16
151 152 7.528675 ACCCCTTAGTATCTTAAAACAAACCA 58.471 34.615 0.00 0.00 0.00 3.67
152 153 9.690913 ATACCCCTTAGTATCTTAAAACAAACC 57.309 33.333 0.00 0.00 0.00 3.27
167 168 8.383947 GCTCCAATTTATAGAATACCCCTTAGT 58.616 37.037 0.00 0.00 0.00 2.24
168 169 8.383175 TGCTCCAATTTATAGAATACCCCTTAG 58.617 37.037 0.00 0.00 0.00 2.18
169 170 8.282801 TGCTCCAATTTATAGAATACCCCTTA 57.717 34.615 0.00 0.00 0.00 2.69
170 171 7.073725 TCTGCTCCAATTTATAGAATACCCCTT 59.926 37.037 0.00 0.00 0.00 3.95
171 172 6.562608 TCTGCTCCAATTTATAGAATACCCCT 59.437 38.462 0.00 0.00 0.00 4.79
172 173 6.779860 TCTGCTCCAATTTATAGAATACCCC 58.220 40.000 0.00 0.00 0.00 4.95
173 174 7.680730 TCTCTGCTCCAATTTATAGAATACCC 58.319 38.462 0.00 0.00 0.00 3.69
174 175 9.213799 CTTCTCTGCTCCAATTTATAGAATACC 57.786 37.037 0.00 0.00 0.00 2.73
175 176 9.771534 ACTTCTCTGCTCCAATTTATAGAATAC 57.228 33.333 0.00 0.00 0.00 1.89
176 177 9.770097 CACTTCTCTGCTCCAATTTATAGAATA 57.230 33.333 0.00 0.00 0.00 1.75
177 178 7.718753 CCACTTCTCTGCTCCAATTTATAGAAT 59.281 37.037 0.00 0.00 0.00 2.40
178 179 7.050377 CCACTTCTCTGCTCCAATTTATAGAA 58.950 38.462 0.00 0.00 0.00 2.10
179 180 6.408548 CCCACTTCTCTGCTCCAATTTATAGA 60.409 42.308 0.00 0.00 0.00 1.98
180 181 5.762218 CCCACTTCTCTGCTCCAATTTATAG 59.238 44.000 0.00 0.00 0.00 1.31
181 182 5.428457 TCCCACTTCTCTGCTCCAATTTATA 59.572 40.000 0.00 0.00 0.00 0.98
182 183 4.228210 TCCCACTTCTCTGCTCCAATTTAT 59.772 41.667 0.00 0.00 0.00 1.40
183 184 3.587061 TCCCACTTCTCTGCTCCAATTTA 59.413 43.478 0.00 0.00 0.00 1.40
184 185 2.376518 TCCCACTTCTCTGCTCCAATTT 59.623 45.455 0.00 0.00 0.00 1.82
185 186 1.988107 TCCCACTTCTCTGCTCCAATT 59.012 47.619 0.00 0.00 0.00 2.32
186 187 1.661463 TCCCACTTCTCTGCTCCAAT 58.339 50.000 0.00 0.00 0.00 3.16
187 188 1.661463 ATCCCACTTCTCTGCTCCAA 58.339 50.000 0.00 0.00 0.00 3.53
188 189 2.550277 TATCCCACTTCTCTGCTCCA 57.450 50.000 0.00 0.00 0.00 3.86
189 190 3.135530 ACAATATCCCACTTCTCTGCTCC 59.864 47.826 0.00 0.00 0.00 4.70
190 191 4.414337 ACAATATCCCACTTCTCTGCTC 57.586 45.455 0.00 0.00 0.00 4.26
191 192 4.521146 CAACAATATCCCACTTCTCTGCT 58.479 43.478 0.00 0.00 0.00 4.24
192 193 3.065925 GCAACAATATCCCACTTCTCTGC 59.934 47.826 0.00 0.00 0.00 4.26
193 194 3.310774 CGCAACAATATCCCACTTCTCTG 59.689 47.826 0.00 0.00 0.00 3.35
194 195 3.197766 TCGCAACAATATCCCACTTCTCT 59.802 43.478 0.00 0.00 0.00 3.10
195 196 3.531538 TCGCAACAATATCCCACTTCTC 58.468 45.455 0.00 0.00 0.00 2.87
196 197 3.627395 TCGCAACAATATCCCACTTCT 57.373 42.857 0.00 0.00 0.00 2.85
197 198 4.695217 TTTCGCAACAATATCCCACTTC 57.305 40.909 0.00 0.00 0.00 3.01
198 199 4.082245 CCTTTTCGCAACAATATCCCACTT 60.082 41.667 0.00 0.00 0.00 3.16
199 200 3.443681 CCTTTTCGCAACAATATCCCACT 59.556 43.478 0.00 0.00 0.00 4.00
200 201 3.769536 CCTTTTCGCAACAATATCCCAC 58.230 45.455 0.00 0.00 0.00 4.61
201 202 2.165437 GCCTTTTCGCAACAATATCCCA 59.835 45.455 0.00 0.00 0.00 4.37
202 203 2.165437 TGCCTTTTCGCAACAATATCCC 59.835 45.455 0.00 0.00 35.32 3.85
203 204 3.179048 GTGCCTTTTCGCAACAATATCC 58.821 45.455 0.00 0.00 41.30 2.59
204 205 3.832276 TGTGCCTTTTCGCAACAATATC 58.168 40.909 0.00 0.00 41.30 1.63
205 206 3.932545 TGTGCCTTTTCGCAACAATAT 57.067 38.095 0.00 0.00 41.30 1.28
206 207 3.067461 ACTTGTGCCTTTTCGCAACAATA 59.933 39.130 0.00 0.00 41.30 1.90
207 208 2.159114 ACTTGTGCCTTTTCGCAACAAT 60.159 40.909 0.00 0.00 41.30 2.71
208 209 1.203523 ACTTGTGCCTTTTCGCAACAA 59.796 42.857 0.00 0.00 41.30 2.83
209 210 0.814457 ACTTGTGCCTTTTCGCAACA 59.186 45.000 0.00 0.00 41.30 3.33
210 211 1.921243 AACTTGTGCCTTTTCGCAAC 58.079 45.000 0.00 0.00 41.30 4.17
211 212 2.423892 TGTAACTTGTGCCTTTTCGCAA 59.576 40.909 0.00 0.00 41.30 4.85
212 213 2.017782 TGTAACTTGTGCCTTTTCGCA 58.982 42.857 0.00 0.00 36.08 5.10
213 214 2.766970 TGTAACTTGTGCCTTTTCGC 57.233 45.000 0.00 0.00 0.00 4.70
214 215 4.219033 GTGATGTAACTTGTGCCTTTTCG 58.781 43.478 0.00 0.00 0.00 3.46
215 216 4.219033 CGTGATGTAACTTGTGCCTTTTC 58.781 43.478 0.00 0.00 0.00 2.29
216 217 3.004315 CCGTGATGTAACTTGTGCCTTTT 59.996 43.478 0.00 0.00 0.00 2.27
217 218 2.552315 CCGTGATGTAACTTGTGCCTTT 59.448 45.455 0.00 0.00 0.00 3.11
218 219 2.151202 CCGTGATGTAACTTGTGCCTT 58.849 47.619 0.00 0.00 0.00 4.35
219 220 1.071699 ACCGTGATGTAACTTGTGCCT 59.928 47.619 0.00 0.00 0.00 4.75
220 221 1.463444 GACCGTGATGTAACTTGTGCC 59.537 52.381 0.00 0.00 0.00 5.01
221 222 1.126113 CGACCGTGATGTAACTTGTGC 59.874 52.381 0.00 0.00 0.00 4.57
222 223 2.400399 ACGACCGTGATGTAACTTGTG 58.600 47.619 0.00 0.00 0.00 3.33
223 224 2.806608 ACGACCGTGATGTAACTTGT 57.193 45.000 0.00 0.00 0.00 3.16
224 225 4.478699 TCTAACGACCGTGATGTAACTTG 58.521 43.478 0.00 0.00 0.00 3.16
225 226 4.771590 TCTAACGACCGTGATGTAACTT 57.228 40.909 0.00 0.00 0.00 2.66
226 227 4.669318 CATCTAACGACCGTGATGTAACT 58.331 43.478 12.06 0.00 33.65 2.24
227 228 3.242248 GCATCTAACGACCGTGATGTAAC 59.758 47.826 17.91 4.90 38.68 2.50
228 229 3.119424 TGCATCTAACGACCGTGATGTAA 60.119 43.478 17.91 9.05 38.68 2.41
229 230 2.424246 TGCATCTAACGACCGTGATGTA 59.576 45.455 17.91 13.53 38.68 2.29
230 231 1.203758 TGCATCTAACGACCGTGATGT 59.796 47.619 17.91 0.00 38.68 3.06
231 232 1.854743 CTGCATCTAACGACCGTGATG 59.145 52.381 14.58 14.58 39.24 3.07
232 233 1.749063 TCTGCATCTAACGACCGTGAT 59.251 47.619 0.00 0.00 0.00 3.06
233 234 1.170442 TCTGCATCTAACGACCGTGA 58.830 50.000 0.00 0.00 0.00 4.35
234 235 2.120232 GATCTGCATCTAACGACCGTG 58.880 52.381 0.00 0.00 0.00 4.94
235 236 2.025155 AGATCTGCATCTAACGACCGT 58.975 47.619 0.00 0.00 37.63 4.83
236 237 2.389059 CAGATCTGCATCTAACGACCG 58.611 52.381 10.38 0.00 37.25 4.79
237 238 2.101582 ACCAGATCTGCATCTAACGACC 59.898 50.000 17.76 0.00 37.25 4.79
238 239 3.119291 CACCAGATCTGCATCTAACGAC 58.881 50.000 17.76 0.00 37.25 4.34
239 240 2.101415 CCACCAGATCTGCATCTAACGA 59.899 50.000 17.76 0.00 37.25 3.85
240 241 2.159043 ACCACCAGATCTGCATCTAACG 60.159 50.000 17.76 3.57 37.25 3.18
241 242 3.118629 TGACCACCAGATCTGCATCTAAC 60.119 47.826 17.76 5.59 37.25 2.34
242 243 3.106827 TGACCACCAGATCTGCATCTAA 58.893 45.455 17.76 0.00 37.25 2.10
243 244 2.697229 CTGACCACCAGATCTGCATCTA 59.303 50.000 17.76 0.91 45.78 1.98
244 245 1.485480 CTGACCACCAGATCTGCATCT 59.515 52.381 17.76 0.00 45.78 2.90
245 246 1.483827 TCTGACCACCAGATCTGCATC 59.516 52.381 17.76 11.17 46.38 3.91
246 247 1.576577 TCTGACCACCAGATCTGCAT 58.423 50.000 17.76 4.50 46.38 3.96
247 248 3.071671 TCTGACCACCAGATCTGCA 57.928 52.632 17.76 8.38 46.38 4.41
259 260 9.710907 TATGTCTGTCATCCGTCATTTCTGACC 62.711 44.444 0.47 0.00 41.66 4.02
260 261 3.614616 GTCTGTCATCCGTCATTTCTGAC 59.385 47.826 0.00 0.00 46.89 3.51
261 262 3.258123 TGTCTGTCATCCGTCATTTCTGA 59.742 43.478 0.00 0.00 0.00 3.27
262 263 3.588955 TGTCTGTCATCCGTCATTTCTG 58.411 45.455 0.00 0.00 0.00 3.02
263 264 3.961480 TGTCTGTCATCCGTCATTTCT 57.039 42.857 0.00 0.00 0.00 2.52
264 265 5.352284 AGTATGTCTGTCATCCGTCATTTC 58.648 41.667 0.00 0.00 37.91 2.17
265 266 5.344743 AGTATGTCTGTCATCCGTCATTT 57.655 39.130 0.00 0.00 37.91 2.32
266 267 6.265422 TGATAGTATGTCTGTCATCCGTCATT 59.735 38.462 0.00 0.00 38.92 2.57
267 268 5.770162 TGATAGTATGTCTGTCATCCGTCAT 59.230 40.000 0.00 0.00 38.92 3.06
268 269 5.130350 TGATAGTATGTCTGTCATCCGTCA 58.870 41.667 0.00 0.00 38.92 4.35
269 270 5.690997 TGATAGTATGTCTGTCATCCGTC 57.309 43.478 0.00 0.00 38.92 4.79
275 276 8.624776 CAGTTAGTGATGATAGTATGTCTGTCA 58.375 37.037 0.00 0.00 45.58 3.58
276 277 8.841300 TCAGTTAGTGATGATAGTATGTCTGTC 58.159 37.037 0.00 0.00 35.32 3.51
277 278 8.753497 TCAGTTAGTGATGATAGTATGTCTGT 57.247 34.615 0.00 0.00 0.00 3.41
278 279 8.845227 ACTCAGTTAGTGATGATAGTATGTCTG 58.155 37.037 0.00 0.00 36.93 3.51
279 280 8.988546 ACTCAGTTAGTGATGATAGTATGTCT 57.011 34.615 0.00 0.00 36.93 3.41
280 281 9.062524 AGACTCAGTTAGTGATGATAGTATGTC 57.937 37.037 0.00 0.00 39.07 3.06
281 282 8.988546 AGACTCAGTTAGTGATGATAGTATGT 57.011 34.615 0.00 0.00 39.07 2.29
289 290 9.475620 TCCTATAAAAGACTCAGTTAGTGATGA 57.524 33.333 0.00 0.00 39.07 2.92
290 291 9.743057 CTCCTATAAAAGACTCAGTTAGTGATG 57.257 37.037 0.00 0.00 39.07 3.07
291 292 9.482175 ACTCCTATAAAAGACTCAGTTAGTGAT 57.518 33.333 0.00 0.00 39.07 3.06
292 293 8.880991 ACTCCTATAAAAGACTCAGTTAGTGA 57.119 34.615 0.00 0.00 39.07 3.41
297 298 9.930158 ATCTCTACTCCTATAAAAGACTCAGTT 57.070 33.333 0.00 0.00 0.00 3.16
298 299 9.349713 CATCTCTACTCCTATAAAAGACTCAGT 57.650 37.037 0.00 0.00 0.00 3.41
299 300 9.567776 TCATCTCTACTCCTATAAAAGACTCAG 57.432 37.037 0.00 0.00 0.00 3.35
300 301 9.567776 CTCATCTCTACTCCTATAAAAGACTCA 57.432 37.037 0.00 0.00 0.00 3.41
301 302 9.787435 TCTCATCTCTACTCCTATAAAAGACTC 57.213 37.037 0.00 0.00 0.00 3.36
304 305 9.527157 CCATCTCATCTCTACTCCTATAAAAGA 57.473 37.037 0.00 0.00 0.00 2.52
305 306 9.308000 ACCATCTCATCTCTACTCCTATAAAAG 57.692 37.037 0.00 0.00 0.00 2.27
306 307 9.661954 AACCATCTCATCTCTACTCCTATAAAA 57.338 33.333 0.00 0.00 0.00 1.52
307 308 9.661954 AAACCATCTCATCTCTACTCCTATAAA 57.338 33.333 0.00 0.00 0.00 1.40
308 309 9.083422 CAAACCATCTCATCTCTACTCCTATAA 57.917 37.037 0.00 0.00 0.00 0.98
309 310 8.228206 ACAAACCATCTCATCTCTACTCCTATA 58.772 37.037 0.00 0.00 0.00 1.31
310 311 7.072562 ACAAACCATCTCATCTCTACTCCTAT 58.927 38.462 0.00 0.00 0.00 2.57
311 312 6.436027 ACAAACCATCTCATCTCTACTCCTA 58.564 40.000 0.00 0.00 0.00 2.94
312 313 5.276440 ACAAACCATCTCATCTCTACTCCT 58.724 41.667 0.00 0.00 0.00 3.69
313 314 5.452636 GGACAAACCATCTCATCTCTACTCC 60.453 48.000 0.00 0.00 38.79 3.85
314 315 5.362430 AGGACAAACCATCTCATCTCTACTC 59.638 44.000 0.00 0.00 42.04 2.59
315 316 5.276440 AGGACAAACCATCTCATCTCTACT 58.724 41.667 0.00 0.00 42.04 2.57
316 317 5.606348 AGGACAAACCATCTCATCTCTAC 57.394 43.478 0.00 0.00 42.04 2.59
317 318 5.129485 GGAAGGACAAACCATCTCATCTCTA 59.871 44.000 0.00 0.00 42.04 2.43
318 319 4.080638 GGAAGGACAAACCATCTCATCTCT 60.081 45.833 0.00 0.00 42.04 3.10
319 320 4.195416 GGAAGGACAAACCATCTCATCTC 58.805 47.826 0.00 0.00 42.04 2.75
320 321 3.369892 CGGAAGGACAAACCATCTCATCT 60.370 47.826 0.00 0.00 42.04 2.90
321 322 2.939103 CGGAAGGACAAACCATCTCATC 59.061 50.000 0.00 0.00 42.04 2.92
322 323 2.941415 GCGGAAGGACAAACCATCTCAT 60.941 50.000 0.00 0.00 42.04 2.90
323 324 1.610624 GCGGAAGGACAAACCATCTCA 60.611 52.381 0.00 0.00 42.04 3.27
324 325 1.087501 GCGGAAGGACAAACCATCTC 58.912 55.000 0.00 0.00 42.04 2.75
325 326 0.322546 GGCGGAAGGACAAACCATCT 60.323 55.000 0.00 0.00 42.04 2.90
326 327 1.644786 CGGCGGAAGGACAAACCATC 61.645 60.000 0.00 0.00 42.04 3.51
327 328 1.674322 CGGCGGAAGGACAAACCAT 60.674 57.895 0.00 0.00 42.04 3.55
328 329 2.281208 CGGCGGAAGGACAAACCA 60.281 61.111 0.00 0.00 42.04 3.67
329 330 1.598685 TTCGGCGGAAGGACAAACC 60.599 57.895 7.21 0.00 39.35 3.27
330 331 0.883370 AGTTCGGCGGAAGGACAAAC 60.883 55.000 7.21 0.86 31.49 2.93
331 332 0.882927 CAGTTCGGCGGAAGGACAAA 60.883 55.000 7.21 0.00 31.49 2.83
332 333 1.301401 CAGTTCGGCGGAAGGACAA 60.301 57.895 7.21 0.00 31.49 3.18
333 334 2.035237 AACAGTTCGGCGGAAGGACA 62.035 55.000 7.21 0.00 31.49 4.02
334 335 0.037975 TAACAGTTCGGCGGAAGGAC 60.038 55.000 7.21 0.00 31.49 3.85
335 336 0.899720 ATAACAGTTCGGCGGAAGGA 59.100 50.000 7.21 0.00 31.49 3.36
336 337 2.589798 TATAACAGTTCGGCGGAAGG 57.410 50.000 7.21 5.60 31.49 3.46
337 338 5.526115 TCTATTATAACAGTTCGGCGGAAG 58.474 41.667 7.21 0.00 31.49 3.46
338 339 5.518848 TCTATTATAACAGTTCGGCGGAA 57.481 39.130 7.21 2.05 0.00 4.30
339 340 5.717078 ATCTATTATAACAGTTCGGCGGA 57.283 39.130 7.21 0.00 0.00 5.54
340 341 5.510674 CGTATCTATTATAACAGTTCGGCGG 59.489 44.000 7.21 0.00 0.00 6.13
341 342 6.309436 TCGTATCTATTATAACAGTTCGGCG 58.691 40.000 0.00 0.00 0.00 6.46
342 343 7.253684 GCATCGTATCTATTATAACAGTTCGGC 60.254 40.741 0.00 0.00 0.00 5.54
343 344 7.968956 AGCATCGTATCTATTATAACAGTTCGG 59.031 37.037 0.00 0.00 0.00 4.30
344 345 8.897457 AGCATCGTATCTATTATAACAGTTCG 57.103 34.615 0.00 0.00 0.00 3.95
370 371 7.009815 CACCTTACTATCTATTTTCGTGCGAAA 59.990 37.037 14.66 14.66 41.69 3.46
371 372 6.474427 CACCTTACTATCTATTTTCGTGCGAA 59.526 38.462 2.65 2.65 0.00 4.70
372 373 5.975344 CACCTTACTATCTATTTTCGTGCGA 59.025 40.000 0.00 0.00 0.00 5.10
373 374 5.175126 CCACCTTACTATCTATTTTCGTGCG 59.825 44.000 0.00 0.00 0.00 5.34
374 375 5.465724 CCCACCTTACTATCTATTTTCGTGC 59.534 44.000 0.00 0.00 0.00 5.34
375 376 6.812998 TCCCACCTTACTATCTATTTTCGTG 58.187 40.000 0.00 0.00 0.00 4.35
376 377 7.427989 TTCCCACCTTACTATCTATTTTCGT 57.572 36.000 0.00 0.00 0.00 3.85
377 378 8.774586 CATTTCCCACCTTACTATCTATTTTCG 58.225 37.037 0.00 0.00 0.00 3.46
378 379 9.628500 ACATTTCCCACCTTACTATCTATTTTC 57.372 33.333 0.00 0.00 0.00 2.29
379 380 9.408648 CACATTTCCCACCTTACTATCTATTTT 57.591 33.333 0.00 0.00 0.00 1.82
380 381 8.778059 TCACATTTCCCACCTTACTATCTATTT 58.222 33.333 0.00 0.00 0.00 1.40
381 382 8.331931 TCACATTTCCCACCTTACTATCTATT 57.668 34.615 0.00 0.00 0.00 1.73
382 383 7.569111 ACTCACATTTCCCACCTTACTATCTAT 59.431 37.037 0.00 0.00 0.00 1.98
383 384 6.901300 ACTCACATTTCCCACCTTACTATCTA 59.099 38.462 0.00 0.00 0.00 1.98
384 385 5.726793 ACTCACATTTCCCACCTTACTATCT 59.273 40.000 0.00 0.00 0.00 1.98
385 386 5.990668 ACTCACATTTCCCACCTTACTATC 58.009 41.667 0.00 0.00 0.00 2.08
393 394 4.695928 GTCTAGAAACTCACATTTCCCACC 59.304 45.833 0.00 0.00 39.05 4.61
397 398 8.381387 GTTTATCGTCTAGAAACTCACATTTCC 58.619 37.037 0.00 0.00 39.05 3.13
398 399 8.922676 TGTTTATCGTCTAGAAACTCACATTTC 58.077 33.333 0.00 0.00 39.52 2.17
403 404 8.462143 TGAATGTTTATCGTCTAGAAACTCAC 57.538 34.615 0.00 0.00 39.52 3.51
464 465 2.417586 CGATCTGTACCTGTACGTGTGA 59.582 50.000 0.00 0.43 38.85 3.58
469 470 2.934553 TGTCTCGATCTGTACCTGTACG 59.065 50.000 3.23 0.00 38.85 3.67
470 471 4.790123 GCATGTCTCGATCTGTACCTGTAC 60.790 50.000 0.45 0.45 36.63 2.90
471 472 3.315470 GCATGTCTCGATCTGTACCTGTA 59.685 47.826 0.00 0.00 0.00 2.74
472 473 2.099921 GCATGTCTCGATCTGTACCTGT 59.900 50.000 0.00 0.00 0.00 4.00
473 474 2.099756 TGCATGTCTCGATCTGTACCTG 59.900 50.000 0.00 0.00 0.00 4.00
474 475 2.379005 TGCATGTCTCGATCTGTACCT 58.621 47.619 0.00 0.00 0.00 3.08
475 476 2.871182 TGCATGTCTCGATCTGTACC 57.129 50.000 0.00 0.00 0.00 3.34
485 486 1.154338 GCACGCACTTGCATGTCTC 60.154 57.895 1.56 0.00 42.49 3.36
487 488 2.126734 GGCACGCACTTGCATGTC 60.127 61.111 1.56 0.00 44.94 3.06
506 507 4.892965 AACTTGTGCGCAGGGGCA 62.893 61.111 12.22 1.08 41.24 5.36
507 508 3.558099 GAAACTTGTGCGCAGGGGC 62.558 63.158 12.22 0.00 0.00 5.80
508 509 1.856265 GAGAAACTTGTGCGCAGGGG 61.856 60.000 12.22 6.06 0.00 4.79
509 510 0.886490 AGAGAAACTTGTGCGCAGGG 60.886 55.000 12.22 6.48 0.00 4.45
510 511 0.514691 GAGAGAAACTTGTGCGCAGG 59.485 55.000 12.22 7.97 0.00 4.85
540 541 5.444877 CCACGCTCGATTAAAATTCAACGTA 60.445 40.000 0.00 0.00 0.00 3.57
541 542 4.391358 CACGCTCGATTAAAATTCAACGT 58.609 39.130 0.00 0.00 0.00 3.99
548 549 2.014128 CCACCCACGCTCGATTAAAAT 58.986 47.619 0.00 0.00 0.00 1.82
573 574 5.161358 TGATTAAGCTCTAATGCGGTATCG 58.839 41.667 0.00 0.00 38.13 2.92
599 600 5.819379 ACCAACTTGCAGACATGTCATATAG 59.181 40.000 27.02 19.06 33.33 1.31
601 602 4.592942 ACCAACTTGCAGACATGTCATAT 58.407 39.130 27.02 4.33 33.33 1.78
603 604 2.867624 ACCAACTTGCAGACATGTCAT 58.132 42.857 27.02 10.02 33.33 3.06
605 606 3.403038 AGTACCAACTTGCAGACATGTC 58.597 45.455 18.47 18.47 33.33 3.06
606 607 3.181455 TGAGTACCAACTTGCAGACATGT 60.181 43.478 0.00 0.00 35.56 3.21
607 608 3.402110 TGAGTACCAACTTGCAGACATG 58.598 45.455 0.00 0.00 35.56 3.21
608 609 3.668447 CTGAGTACCAACTTGCAGACAT 58.332 45.455 0.00 0.00 35.56 3.06
609 610 2.806745 GCTGAGTACCAACTTGCAGACA 60.807 50.000 0.00 0.00 35.56 3.41
610 611 1.801178 GCTGAGTACCAACTTGCAGAC 59.199 52.381 0.00 0.00 35.56 3.51
613 620 0.250727 GGGCTGAGTACCAACTTGCA 60.251 55.000 0.00 0.00 37.28 4.08
622 629 0.464554 GGCAGATTGGGGCTGAGTAC 60.465 60.000 0.00 0.00 35.39 2.73
625 632 1.000521 TTGGCAGATTGGGGCTGAG 60.001 57.895 0.00 0.00 35.39 3.35
633 640 3.924686 GTCTTTCATTGCTTGGCAGATTG 59.075 43.478 0.00 0.00 40.61 2.67
648 655 2.872732 AGAGAGGGTACACGTCTTTCA 58.127 47.619 0.00 0.00 43.90 2.69
649 656 3.181512 CGTAGAGAGGGTACACGTCTTTC 60.182 52.174 8.18 3.04 43.90 2.62
651 658 2.289945 ACGTAGAGAGGGTACACGTCTT 60.290 50.000 8.18 2.82 43.90 3.01
653 660 1.731720 ACGTAGAGAGGGTACACGTC 58.268 55.000 0.00 0.00 41.62 4.34
654 661 2.191128 AACGTAGAGAGGGTACACGT 57.809 50.000 0.00 0.00 46.82 4.49
655 662 3.565905 AAAACGTAGAGAGGGTACACG 57.434 47.619 0.00 0.00 38.52 4.49
656 663 3.431233 GCAAAAACGTAGAGAGGGTACAC 59.569 47.826 0.00 0.00 0.00 2.90
657 664 3.656559 GCAAAAACGTAGAGAGGGTACA 58.343 45.455 0.00 0.00 0.00 2.90
658 665 2.665052 CGCAAAAACGTAGAGAGGGTAC 59.335 50.000 0.00 0.00 0.00 3.34
659 666 2.557924 TCGCAAAAACGTAGAGAGGGTA 59.442 45.455 0.00 0.00 0.00 3.69
660 667 1.342174 TCGCAAAAACGTAGAGAGGGT 59.658 47.619 0.00 0.00 0.00 4.34
661 668 2.074547 TCGCAAAAACGTAGAGAGGG 57.925 50.000 0.00 0.00 0.00 4.30
664 671 5.721876 TTTCTTTCGCAAAAACGTAGAGA 57.278 34.783 0.00 0.00 0.00 3.10
691 698 1.133025 ACACGTACGTAGGGTACATGC 59.867 52.381 22.34 0.00 46.44 4.06
699 706 3.740590 CAACTCTGTACACGTACGTAGG 58.259 50.000 22.34 12.52 38.85 3.18
722 729 2.821366 CCAGATGGCTCCACACGC 60.821 66.667 0.00 0.00 0.00 5.34
753 760 1.005097 TGACAAGCCTGAATGCCTGAT 59.995 47.619 0.00 0.00 0.00 2.90
757 764 1.503542 CGTGACAAGCCTGAATGCC 59.496 57.895 0.00 0.00 0.00 4.40
796 803 0.838122 CTTCCACTCCACCTCCACCT 60.838 60.000 0.00 0.00 0.00 4.00
797 804 1.128188 ACTTCCACTCCACCTCCACC 61.128 60.000 0.00 0.00 0.00 4.61
798 805 0.321996 GACTTCCACTCCACCTCCAC 59.678 60.000 0.00 0.00 0.00 4.02
799 806 1.185618 CGACTTCCACTCCACCTCCA 61.186 60.000 0.00 0.00 0.00 3.86
836 843 6.433766 CGTCTGCATTTCTTTCTTTCTTTCT 58.566 36.000 0.00 0.00 0.00 2.52
838 845 5.299279 TCCGTCTGCATTTCTTTCTTTCTTT 59.701 36.000 0.00 0.00 0.00 2.52
839 846 4.821805 TCCGTCTGCATTTCTTTCTTTCTT 59.178 37.500 0.00 0.00 0.00 2.52
840 847 4.389374 TCCGTCTGCATTTCTTTCTTTCT 58.611 39.130 0.00 0.00 0.00 2.52
841 848 4.716943 CTCCGTCTGCATTTCTTTCTTTC 58.283 43.478 0.00 0.00 0.00 2.62
842 849 3.057946 GCTCCGTCTGCATTTCTTTCTTT 60.058 43.478 0.00 0.00 0.00 2.52
843 850 2.485814 GCTCCGTCTGCATTTCTTTCTT 59.514 45.455 0.00 0.00 0.00 2.52
844 851 2.079925 GCTCCGTCTGCATTTCTTTCT 58.920 47.619 0.00 0.00 0.00 2.52
891 898 4.989279 ACTGCAACAAACATCAAGTCTT 57.011 36.364 0.00 0.00 0.00 3.01
892 899 6.449635 TTTACTGCAACAAACATCAAGTCT 57.550 33.333 0.00 0.00 0.00 3.24
922 929 0.035630 AGCGAGAGAAAGCTGGCATT 60.036 50.000 0.00 0.00 42.82 3.56
923 930 0.461693 GAGCGAGAGAAAGCTGGCAT 60.462 55.000 0.00 0.00 44.69 4.40
924 931 1.079543 GAGCGAGAGAAAGCTGGCA 60.080 57.895 0.00 0.00 44.69 4.92
925 932 0.671781 TTGAGCGAGAGAAAGCTGGC 60.672 55.000 0.00 0.00 44.69 4.85
952 959 5.866633 TCTTGATGTTGCGTTTCTTGTTTTT 59.133 32.000 0.00 0.00 0.00 1.94
972 980 3.425162 AGCTTGGGGTCTTAACTCTTG 57.575 47.619 0.00 0.00 0.00 3.02
1184 1232 3.665675 AACCCAGATCGGCGTCAGC 62.666 63.158 6.85 0.00 44.18 4.26
1185 1233 0.673644 AAAACCCAGATCGGCGTCAG 60.674 55.000 6.85 0.80 0.00 3.51
1186 1234 0.953471 CAAAACCCAGATCGGCGTCA 60.953 55.000 6.85 0.00 0.00 4.35
1187 1235 0.953960 ACAAAACCCAGATCGGCGTC 60.954 55.000 6.85 3.93 0.00 5.19
1188 1236 1.072505 ACAAAACCCAGATCGGCGT 59.927 52.632 6.85 0.00 0.00 5.68
1246 1502 4.052229 CGTCGCTGGAGGAACCGT 62.052 66.667 0.00 0.00 42.61 4.83
1248 1504 2.126031 GACGTCGCTGGAGGAACC 60.126 66.667 0.00 0.00 39.54 3.62
1271 1527 3.289834 AGCAGCAACCAAGCACCG 61.290 61.111 0.00 0.00 36.85 4.94
1319 1577 4.828296 TCCCCTACGGTCCTCGGC 62.828 72.222 0.00 0.00 44.45 5.54
1320 1578 2.518825 CTCCCCTACGGTCCTCGG 60.519 72.222 0.00 0.00 44.45 4.63
1322 1580 2.838693 GCCTCCCCTACGGTCCTC 60.839 72.222 0.00 0.00 0.00 3.71
1323 1581 4.477119 GGCCTCCCCTACGGTCCT 62.477 72.222 0.00 0.00 0.00 3.85
1467 1761 2.132996 AGCAGATAGGAGCAGCGCT 61.133 57.895 2.64 2.64 43.88 5.92
1520 1871 5.309543 TGTACCCAGCCATACAAATATAGCT 59.690 40.000 0.00 0.00 36.33 3.32
1525 1876 6.503924 AGGATATGTACCCAGCCATACAAATA 59.496 38.462 1.48 0.00 35.05 1.40
1526 1877 5.313240 AGGATATGTACCCAGCCATACAAAT 59.687 40.000 1.48 0.00 35.05 2.32
1553 1914 6.436843 ACTCAGGAAAACAAACAGTACTTG 57.563 37.500 0.00 0.00 0.00 3.16
1571 1932 1.073964 CGATGTGCCTGTCAACTCAG 58.926 55.000 0.00 0.00 35.45 3.35
1581 1945 5.535030 TGTAGTACTGATTATCGATGTGCCT 59.465 40.000 8.54 0.87 0.00 4.75
1620 1984 4.759693 TGCATTTGTGTTACCCTCACTAAG 59.240 41.667 0.00 0.00 35.11 2.18
1621 1985 4.720046 TGCATTTGTGTTACCCTCACTAA 58.280 39.130 0.00 0.00 36.83 2.24
1622 1986 4.359434 TGCATTTGTGTTACCCTCACTA 57.641 40.909 0.00 0.00 36.83 2.74
1623 1987 3.222173 TGCATTTGTGTTACCCTCACT 57.778 42.857 0.00 0.00 36.83 3.41
1624 1988 4.519540 ATTGCATTTGTGTTACCCTCAC 57.480 40.909 0.00 0.00 36.48 3.51
1625 1989 5.543507 AAATTGCATTTGTGTTACCCTCA 57.456 34.783 0.00 0.00 0.00 3.86
1631 2067 8.883954 TTGAGATGAAAATTGCATTTGTGTTA 57.116 26.923 0.00 0.00 31.77 2.41
1677 2118 6.607198 ACCCAAATCCACTCATCGATATTTTT 59.393 34.615 0.00 0.00 0.00 1.94
1685 2126 4.450976 TCAATACCCAAATCCACTCATCG 58.549 43.478 0.00 0.00 0.00 3.84
1699 2140 3.304794 CGACTCCTCGAATCTCAATACCC 60.305 52.174 0.00 0.00 43.06 3.69
1700 2141 3.304794 CCGACTCCTCGAATCTCAATACC 60.305 52.174 0.00 0.00 43.06 2.73
1701 2142 3.315749 ACCGACTCCTCGAATCTCAATAC 59.684 47.826 0.00 0.00 43.06 1.89
1702 2143 3.552875 ACCGACTCCTCGAATCTCAATA 58.447 45.455 0.00 0.00 43.06 1.90
1703 2144 2.379972 ACCGACTCCTCGAATCTCAAT 58.620 47.619 0.00 0.00 43.06 2.57
1704 2145 1.835494 ACCGACTCCTCGAATCTCAA 58.165 50.000 0.00 0.00 43.06 3.02
1705 2146 1.472878 CAACCGACTCCTCGAATCTCA 59.527 52.381 0.00 0.00 43.06 3.27
1706 2147 1.202313 CCAACCGACTCCTCGAATCTC 60.202 57.143 0.00 0.00 43.06 2.75
1707 2148 0.818296 CCAACCGACTCCTCGAATCT 59.182 55.000 0.00 0.00 43.06 2.40
1708 2149 0.815734 TCCAACCGACTCCTCGAATC 59.184 55.000 0.00 0.00 43.06 2.52
1709 2150 0.818296 CTCCAACCGACTCCTCGAAT 59.182 55.000 0.00 0.00 43.06 3.34
1710 2151 0.538977 ACTCCAACCGACTCCTCGAA 60.539 55.000 0.00 0.00 43.06 3.71
1711 2152 1.074423 ACTCCAACCGACTCCTCGA 59.926 57.895 0.00 0.00 43.06 4.04
1712 2153 1.213013 CACTCCAACCGACTCCTCG 59.787 63.158 0.00 0.00 39.83 4.63
1793 2234 9.466497 TCATTTTCAAGATAGTAAAGAGCCAAT 57.534 29.630 0.00 0.00 0.00 3.16
1842 2283 6.039616 GGTAGCATGAAAAGAACAAAACACA 58.960 36.000 0.00 0.00 0.00 3.72
1880 2324 7.664731 AGGGATATGAACTTGAGCTAATGATTG 59.335 37.037 0.00 0.00 0.00 2.67
1892 2336 9.123902 TGTTTATTCATCAGGGATATGAACTTG 57.876 33.333 0.91 0.00 43.96 3.16
1990 2434 0.107459 CTGCTCCAAGGAGGGTAAGC 60.107 60.000 17.34 3.74 42.19 3.09
2324 2776 4.275810 AGCTGTACATCAATGCCAGAAAT 58.724 39.130 12.11 0.00 34.06 2.17
2423 2875 7.332182 GTGTAAGAATGTACCAGGAAAAGAGAG 59.668 40.741 0.00 0.00 0.00 3.20
2439 2891 6.636562 AGAGTATACGAGGGTGTAAGAATG 57.363 41.667 0.00 0.00 0.00 2.67
2500 2954 6.079712 AGTAGGCTCCATTACCAAAATTCT 57.920 37.500 0.00 0.00 0.00 2.40
2515 2969 5.331876 ACTGATTTGTCACTAGTAGGCTC 57.668 43.478 1.45 0.00 0.00 4.70
2517 2971 6.043411 CCTTACTGATTTGTCACTAGTAGGC 58.957 44.000 1.45 0.00 0.00 3.93
2521 2975 4.323562 GGCCCTTACTGATTTGTCACTAGT 60.324 45.833 0.00 0.00 0.00 2.57
2525 2984 1.737793 CGGCCCTTACTGATTTGTCAC 59.262 52.381 0.00 0.00 0.00 3.67
2534 2993 1.442148 GACCTAGCGGCCCTTACTG 59.558 63.158 0.00 0.00 0.00 2.74
2543 3002 1.549170 GTATGGGTATGGACCTAGCGG 59.451 57.143 0.00 0.00 46.09 5.52
2544 3004 1.549170 GGTATGGGTATGGACCTAGCG 59.451 57.143 0.00 0.00 46.09 4.26
2545 3005 1.549170 CGGTATGGGTATGGACCTAGC 59.451 57.143 0.00 0.00 46.09 3.42
2552 3012 3.570912 AAAGGTTCGGTATGGGTATGG 57.429 47.619 0.00 0.00 0.00 2.74
2564 3024 6.995511 TCCTTCAAATATGGTAAAGGTTCG 57.004 37.500 0.00 0.00 38.12 3.95
2574 3034 4.866508 ATGCAGCATCCTTCAAATATGG 57.133 40.909 0.52 0.00 0.00 2.74
2670 3131 9.971922 GCTTCAATTAAACCAGATATTGCTATT 57.028 29.630 0.00 0.00 0.00 1.73
2810 3329 5.878406 ACAGTACTGCTAATAGCTTCCAT 57.122 39.130 22.90 0.00 42.97 3.41
2985 3510 1.303888 AATGGAGCACACAGGCCTG 60.304 57.895 31.60 31.60 0.00 4.85
3208 3734 1.610673 GCCAGGAGAGGGAGTGACA 60.611 63.158 0.00 0.00 0.00 3.58
3209 3735 1.305718 AGCCAGGAGAGGGAGTGAC 60.306 63.158 0.00 0.00 0.00 3.67
3275 3806 4.330894 ACATCAATAGCATTCAGACACACG 59.669 41.667 0.00 0.00 0.00 4.49
3317 3850 3.790744 TTGCGATGCAACCATGAAC 57.209 47.368 0.00 0.00 43.99 3.18
3433 3970 8.263640 TGGAAAAATCCAAAGAATGAGTGAAAA 58.736 29.630 0.00 0.00 36.74 2.29
3435 3972 7.358770 TGGAAAAATCCAAAGAATGAGTGAA 57.641 32.000 0.00 0.00 36.74 3.18
3443 3980 8.257306 GGTATTATGCTGGAAAAATCCAAAGAA 58.743 33.333 0.00 0.00 39.61 2.52
3566 4119 8.138712 TGTTTCTTTGCGACCTTTATTGTTATT 58.861 29.630 0.00 0.00 0.00 1.40
3567 4120 7.653647 TGTTTCTTTGCGACCTTTATTGTTAT 58.346 30.769 0.00 0.00 0.00 1.89
3568 4121 7.028926 TGTTTCTTTGCGACCTTTATTGTTA 57.971 32.000 0.00 0.00 0.00 2.41
3571 4124 5.977129 AGTTGTTTCTTTGCGACCTTTATTG 59.023 36.000 0.00 0.00 0.00 1.90
3597 4150 1.078709 CACGACAAGGTAGCCATGTG 58.921 55.000 5.77 2.38 35.48 3.21
3609 4162 7.956420 TCTTAGCTTATTCTTTTCACGACAA 57.044 32.000 0.00 0.00 0.00 3.18
3612 4165 9.871238 ACTTATCTTAGCTTATTCTTTTCACGA 57.129 29.630 0.00 0.00 0.00 4.35
3686 4240 1.191096 CTGCAACAAAGTTGTGCGTC 58.809 50.000 11.09 0.00 41.31 5.19
3777 4336 3.129287 ACAGCGAAGGATTGCAAATTAGG 59.871 43.478 1.71 0.00 0.00 2.69
3782 4341 3.342719 TCATACAGCGAAGGATTGCAAA 58.657 40.909 1.71 0.00 0.00 3.68
3801 4360 9.090692 GGTGTCGTATTTAGCTAATTAGTTTCA 57.909 33.333 13.91 3.53 0.00 2.69
4029 4597 1.261480 TGCTGGAGGACTGAGAAGAC 58.739 55.000 0.00 0.00 0.00 3.01
4129 4707 4.752879 TAGCCGCGGGTGTTGCTC 62.753 66.667 38.34 13.76 35.34 4.26
4137 4715 0.033504 ATACATGAACTAGCCGCGGG 59.966 55.000 29.38 13.36 0.00 6.13
4142 4720 5.183140 ACACAAAACCATACATGAACTAGCC 59.817 40.000 0.00 0.00 0.00 3.93
4241 4819 9.491675 TTTTCTAATGTTCAAGGTATAACGACA 57.508 29.630 0.00 0.00 0.00 4.35
4310 4894 3.317150 CATTTACAGTCTCACAGCACGA 58.683 45.455 0.00 0.00 0.00 4.35
4325 4914 7.922811 CCAAATTCTCCTTATTCAGGCATTTAC 59.077 37.037 0.00 0.00 43.55 2.01
4327 4916 6.126968 CCCAAATTCTCCTTATTCAGGCATTT 60.127 38.462 0.00 0.00 43.55 2.32
4373 4965 0.322322 ACCGCCGTTTATTCTGGACA 59.678 50.000 0.00 0.00 0.00 4.02
4386 4978 4.038080 GGCAACAGGAAACCGCCG 62.038 66.667 0.00 0.00 32.14 6.46
4389 4981 1.184970 ATTGGGGCAACAGGAAACCG 61.185 55.000 0.00 0.00 39.74 4.44
4404 4996 5.993441 TCATACAGCTACACATGATGATTGG 59.007 40.000 0.00 0.00 0.00 3.16
4405 4997 7.668525 ATCATACAGCTACACATGATGATTG 57.331 36.000 0.00 0.00 36.89 2.67
4406 4998 7.718314 ACAATCATACAGCTACACATGATGATT 59.282 33.333 0.00 3.75 41.09 2.57
4413 5005 5.744171 TGGAACAATCATACAGCTACACAT 58.256 37.500 0.00 0.00 31.92 3.21
4414 5006 5.159273 TGGAACAATCATACAGCTACACA 57.841 39.130 0.00 0.00 31.92 3.72
4447 5039 5.352569 GCACTCATAGCACTGTGATAAGTTT 59.647 40.000 12.86 0.00 30.40 2.66
4450 5042 4.436332 TGCACTCATAGCACTGTGATAAG 58.564 43.478 12.86 6.99 37.02 1.73
4470 5062 1.402325 GGCCATCCAAAACTTACGTGC 60.402 52.381 0.00 0.00 0.00 5.34
4490 5082 6.921857 AGTCTCAGAAAAATGCAAGAACAATG 59.078 34.615 0.00 0.00 0.00 2.82
4497 5089 3.231965 CGCAGTCTCAGAAAAATGCAAG 58.768 45.455 0.00 0.00 33.33 4.01
4499 5091 1.069022 GCGCAGTCTCAGAAAAATGCA 60.069 47.619 0.30 0.00 33.33 3.96
4511 5103 1.869767 CTTTCTTCACTTGCGCAGTCT 59.130 47.619 11.31 0.00 30.92 3.24
4512 5104 1.069636 CCTTTCTTCACTTGCGCAGTC 60.070 52.381 11.31 0.00 30.92 3.51
4513 5105 0.947244 CCTTTCTTCACTTGCGCAGT 59.053 50.000 11.31 8.53 35.35 4.40
4514 5106 0.239347 CCCTTTCTTCACTTGCGCAG 59.761 55.000 11.31 7.81 0.00 5.18
4515 5107 1.172180 CCCCTTTCTTCACTTGCGCA 61.172 55.000 5.66 5.66 0.00 6.09
4516 5108 0.889186 TCCCCTTTCTTCACTTGCGC 60.889 55.000 0.00 0.00 0.00 6.09
4517 5109 1.160137 CTCCCCTTTCTTCACTTGCG 58.840 55.000 0.00 0.00 0.00 4.85
4518 5110 0.884514 GCTCCCCTTTCTTCACTTGC 59.115 55.000 0.00 0.00 0.00 4.01
4519 5111 1.882623 GTGCTCCCCTTTCTTCACTTG 59.117 52.381 0.00 0.00 0.00 3.16
4520 5112 1.543429 CGTGCTCCCCTTTCTTCACTT 60.543 52.381 0.00 0.00 0.00 3.16
4521 5113 0.035458 CGTGCTCCCCTTTCTTCACT 59.965 55.000 0.00 0.00 0.00 3.41
4523 5115 1.374947 CCGTGCTCCCCTTTCTTCA 59.625 57.895 0.00 0.00 0.00 3.02
4524 5116 2.041115 GCCGTGCTCCCCTTTCTTC 61.041 63.158 0.00 0.00 0.00 2.87
4526 5118 4.394712 CGCCGTGCTCCCCTTTCT 62.395 66.667 0.00 0.00 0.00 2.52
4547 5141 2.666715 CTTTGCCACTGTGCGGTGTG 62.667 60.000 1.29 3.57 35.63 3.82
4548 5142 2.439338 TTTGCCACTGTGCGGTGT 60.439 55.556 1.29 0.00 35.63 4.16
4549 5143 2.332514 CTTTGCCACTGTGCGGTG 59.667 61.111 1.29 4.26 37.00 4.94
4550 5144 2.124320 ACTTTGCCACTGTGCGGT 60.124 55.556 1.29 0.00 0.00 5.68
4551 5145 2.332514 CACTTTGCCACTGTGCGG 59.667 61.111 1.29 0.00 0.00 5.69
4552 5146 2.332514 CCACTTTGCCACTGTGCG 59.667 61.111 1.29 0.00 0.00 5.34
4553 5147 2.730094 CCCACTTTGCCACTGTGC 59.270 61.111 1.29 0.00 0.00 4.57
4621 5215 9.642343 ATCACCTACTAGTTATATGTGAAGACA 57.358 33.333 0.00 0.00 32.97 3.41
4663 5257 1.600638 CTCACATGGAGCAGCTGGA 59.399 57.895 17.12 0.03 36.69 3.86
4671 5265 1.798626 TCTCATCCCCTCACATGGAG 58.201 55.000 0.00 0.76 43.65 3.86
4711 5305 4.453478 ACACACACACAAGAGATAATGCTG 59.547 41.667 0.00 0.00 0.00 4.41
4736 5360 4.711846 GGATTTAGGACAAGCCCTTCAATT 59.288 41.667 0.00 0.00 37.74 2.32
4743 5367 5.250774 TCCTATATGGATTTAGGACAAGCCC 59.749 44.000 2.63 0.00 39.22 5.19
4779 5403 8.005388 ACTGGATAACTAGCTTGGTCTATAAGA 58.995 37.037 0.00 0.00 0.00 2.10
4827 5451 1.131638 AAGTGGCAAGACACAGGAGA 58.868 50.000 9.00 0.00 43.72 3.71
4862 5486 4.133013 ACCAAACAACTCACGAGTAAGT 57.867 40.909 0.00 0.02 41.58 2.24
4866 5490 2.800629 CGGTACCAAACAACTCACGAGT 60.801 50.000 13.54 0.00 44.94 4.18
4913 5537 6.585695 ATTGCTCTGATGACAAGATGTTTT 57.414 33.333 0.00 0.00 0.00 2.43
4914 5538 6.318144 CCTATTGCTCTGATGACAAGATGTTT 59.682 38.462 0.00 0.00 0.00 2.83
4916 5540 5.104610 ACCTATTGCTCTGATGACAAGATGT 60.105 40.000 0.00 0.00 0.00 3.06
4924 5548 5.619132 TGATCAACCTATTGCTCTGATGA 57.381 39.130 0.00 0.00 33.06 2.92
4972 5596 5.248870 TGGAAGCTTCTCAAGAACAAAAC 57.751 39.130 25.05 5.12 0.00 2.43
5083 5707 1.165270 CATCGGTGGGTTCCAAACTC 58.835 55.000 0.00 0.00 34.18 3.01
5099 5723 5.348451 GTGTATTTTCCAATGCCAACACATC 59.652 40.000 0.00 0.00 36.77 3.06
5145 5771 2.733593 GGTCGTGACGCGCTTCTT 60.734 61.111 15.44 0.00 41.07 2.52
5156 5782 1.663702 GTTGGTCTCCACGGTCGTG 60.664 63.158 15.62 15.62 45.02 4.35
5157 5783 2.732658 GTTGGTCTCCACGGTCGT 59.267 61.111 0.00 0.00 30.78 4.34
5160 5786 1.458777 TGAGGTTGGTCTCCACGGT 60.459 57.895 0.00 0.00 30.78 4.83
5177 5803 1.065854 AGGAAGTTGATTCTCCGGCTG 60.066 52.381 0.00 0.00 38.07 4.85
5178 5804 1.208293 GAGGAAGTTGATTCTCCGGCT 59.792 52.381 0.00 0.00 38.07 5.52
5217 5843 2.894126 CGATCCCATGTAGAAGCCTACT 59.106 50.000 0.00 0.00 44.30 2.57
5218 5844 2.891580 TCGATCCCATGTAGAAGCCTAC 59.108 50.000 0.00 0.00 44.26 3.18
5225 5852 2.858745 TCGATGTCGATCCCATGTAGA 58.141 47.619 0.21 0.00 44.22 2.59
5253 5880 1.938861 CGTTGGCGCTGTAGTTTGT 59.061 52.632 7.64 0.00 0.00 2.83
5274 5901 2.193248 CATTTCCCTCCTCCGGGC 59.807 66.667 0.00 0.00 44.30 6.13
5277 5904 0.755686 CTCTCCATTTCCCTCCTCCG 59.244 60.000 0.00 0.00 0.00 4.63
5278 5905 0.472044 GCTCTCCATTTCCCTCCTCC 59.528 60.000 0.00 0.00 0.00 4.30
5287 5914 2.358615 TGCGCGTGCTCTCCATTT 60.359 55.556 23.16 0.00 43.34 2.32
5300 5927 2.019951 CATCGGGGTATACGTGCGC 61.020 63.158 0.00 0.00 0.00 6.09
5301 5928 0.242825 ATCATCGGGGTATACGTGCG 59.757 55.000 0.00 0.00 0.00 5.34
5302 5929 1.710013 CATCATCGGGGTATACGTGC 58.290 55.000 0.00 0.00 0.00 5.34
5305 5932 0.108329 GGGCATCATCGGGGTATACG 60.108 60.000 0.00 0.00 0.00 3.06
5308 5935 1.839994 CTATGGGCATCATCGGGGTAT 59.160 52.381 0.00 0.00 37.30 2.73
5312 5939 0.904649 TAGCTATGGGCATCATCGGG 59.095 55.000 0.00 0.00 44.79 5.14
5314 5941 1.276138 TGGTAGCTATGGGCATCATCG 59.724 52.381 0.00 0.00 44.79 3.84
5323 5950 6.321690 GGGATAGTGTAGTATGGTAGCTATGG 59.678 46.154 0.00 0.00 0.00 2.74
5333 5960 5.858381 AGCATGTTGGGATAGTGTAGTATG 58.142 41.667 0.00 0.00 0.00 2.39
5335 5962 4.959839 TGAGCATGTTGGGATAGTGTAGTA 59.040 41.667 0.00 0.00 0.00 1.82
5336 5963 3.774766 TGAGCATGTTGGGATAGTGTAGT 59.225 43.478 0.00 0.00 0.00 2.73
5343 5970 1.064758 GGTGGTGAGCATGTTGGGATA 60.065 52.381 0.00 0.00 0.00 2.59
5345 5972 1.074775 GGTGGTGAGCATGTTGGGA 59.925 57.895 0.00 0.00 0.00 4.37
5347 5974 0.314935 GTTGGTGGTGAGCATGTTGG 59.685 55.000 0.00 0.00 0.00 3.77
5349 5976 1.408702 GTTGTTGGTGGTGAGCATGTT 59.591 47.619 0.00 0.00 0.00 2.71
5352 5979 1.682854 CTTGTTGTTGGTGGTGAGCAT 59.317 47.619 0.00 0.00 0.00 3.79
5368 5995 3.132111 GTGGTTCCCAAACAACATCTTGT 59.868 43.478 0.00 0.00 42.81 3.16
5369 5996 3.131933 TGTGGTTCCCAAACAACATCTTG 59.868 43.478 0.00 0.00 43.04 3.02
5370 5997 3.370104 TGTGGTTCCCAAACAACATCTT 58.630 40.909 0.00 0.00 43.04 2.40
5371 5998 3.025322 TGTGGTTCCCAAACAACATCT 57.975 42.857 0.00 0.00 43.04 2.90
5372 5999 3.810310 TTGTGGTTCCCAAACAACATC 57.190 42.857 0.00 0.00 46.30 3.06
5373 6000 3.966665 AGATTGTGGTTCCCAAACAACAT 59.033 39.130 0.00 0.00 46.30 2.71
5374 6001 3.370104 AGATTGTGGTTCCCAAACAACA 58.630 40.909 0.00 0.00 45.58 3.33
5375 6002 3.243737 GGAGATTGTGGTTCCCAAACAAC 60.244 47.826 0.00 0.00 39.42 3.32
5376 6003 2.962421 GGAGATTGTGGTTCCCAAACAA 59.038 45.455 0.00 0.00 37.10 2.83
5377 6004 2.593026 GGAGATTGTGGTTCCCAAACA 58.407 47.619 0.00 0.00 37.10 2.83
5383 6010 0.323451 GTGGGGGAGATTGTGGTTCC 60.323 60.000 0.00 0.00 0.00 3.62
5384 6011 0.676782 CGTGGGGGAGATTGTGGTTC 60.677 60.000 0.00 0.00 0.00 3.62
5385 6012 1.131303 TCGTGGGGGAGATTGTGGTT 61.131 55.000 0.00 0.00 0.00 3.67
5386 6013 1.537889 TCGTGGGGGAGATTGTGGT 60.538 57.895 0.00 0.00 0.00 4.16
5387 6014 1.221840 CTCGTGGGGGAGATTGTGG 59.778 63.158 0.00 0.00 36.08 4.17
5388 6015 4.941609 CTCGTGGGGGAGATTGTG 57.058 61.111 0.00 0.00 36.08 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.