Multiple sequence alignment - TraesCS2A01G357500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G357500 chr2A 100.000 5425 0 0 1 5425 602113682 602119106 0.000000e+00 10019.0
1 TraesCS2A01G357500 chr2A 96.907 194 6 0 1 194 42796712 42796905 5.240000e-85 326.0
2 TraesCS2A01G357500 chr2B 94.902 1589 57 17 1734 3310 539648296 539649872 0.000000e+00 2464.0
3 TraesCS2A01G357500 chr2B 92.494 1612 74 26 3325 4923 539649961 539651538 0.000000e+00 2263.0
4 TraesCS2A01G357500 chr2B 86.280 1035 59 32 731 1728 539647163 539648151 0.000000e+00 1048.0
5 TraesCS2A01G357500 chr2D 94.821 1564 59 13 2561 4114 458718411 458719962 0.000000e+00 2420.0
6 TraesCS2A01G357500 chr2D 88.031 1529 88 47 219 1719 458714044 458715505 0.000000e+00 1722.0
7 TraesCS2A01G357500 chr2D 92.231 1210 52 15 4114 5310 458720026 458721206 0.000000e+00 1676.0
8 TraesCS2A01G357500 chr2D 94.947 851 35 4 1722 2566 458716193 458717041 0.000000e+00 1327.0
9 TraesCS2A01G357500 chr7B 97.423 194 5 0 1 194 633030986 633031179 1.130000e-86 331.0
10 TraesCS2A01G357500 chr5B 97.423 194 5 0 1 194 596082243 596082436 1.130000e-86 331.0
11 TraesCS2A01G357500 chr5B 96.429 196 7 0 1 196 698451561 698451366 1.880000e-84 324.0
12 TraesCS2A01G357500 chr5B 95.500 200 9 0 1 200 638752372 638752173 2.440000e-83 320.0
13 TraesCS2A01G357500 chr4A 97.396 192 5 0 1 192 589616029 589616220 1.460000e-85 327.0
14 TraesCS2A01G357500 chr4A 95.588 204 8 1 1 203 12206719 12206922 5.240000e-85 326.0
15 TraesCS2A01G357500 chr3B 95.610 205 6 2 1 202 727161246 727161450 5.240000e-85 326.0
16 TraesCS2A01G357500 chr1A 96.907 194 6 0 1 194 471289613 471289420 5.240000e-85 326.0
17 TraesCS2A01G357500 chr4B 79.096 177 24 7 5066 5232 155376572 155376399 5.740000e-20 110.0
18 TraesCS2A01G357500 chr1D 100.000 30 0 0 4925 4954 194541296 194541325 7.590000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G357500 chr2A 602113682 602119106 5424 False 10019.00 10019 100.000000 1 5425 1 chr2A.!!$F2 5424
1 TraesCS2A01G357500 chr2B 539647163 539651538 4375 False 1925.00 2464 91.225333 731 4923 3 chr2B.!!$F1 4192
2 TraesCS2A01G357500 chr2D 458714044 458721206 7162 False 1786.25 2420 92.507500 219 5310 4 chr2D.!!$F1 5091

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
133 134 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.0 0.0 0.0 0.00 2.69 F
135 136 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.0 0.0 0.0 0.00 3.18 F
642 643 0.316204 GCCAGTACACCACAGTACGT 59.684 55.0 0.0 0.0 46.85 3.57 F
1764 2503 0.448990 TGCGATGCTTTCTGTCATGC 59.551 50.0 0.0 0.0 0.00 4.06 F
3261 5387 1.344953 TGTGGACTTCACTGGGCACT 61.345 55.0 0.0 0.0 46.20 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1601 1655 0.179119 GCAAGCACCGTACCTATCGT 60.179 55.000 0.00 0.00 0.00 3.73 R
1898 2643 1.447314 GAACACCCTTCGGCGGTAG 60.447 63.158 7.21 4.92 30.42 3.18 R
2445 3194 0.608308 ACCCACTGAGATCGACGTCA 60.608 55.000 17.16 3.13 0.00 4.35 R
3311 5437 1.397945 CGTTTTGCGCGTTCAGTACAT 60.398 47.619 8.43 0.00 0.00 2.29 R
4563 6835 0.178921 TCTTCCCACTCCTGAGCAGT 60.179 55.000 0.00 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.462456 GCCGGCATATCATCTTGAGA 57.538 50.000 24.80 0.00 0.00 3.27
20 21 2.983229 GCCGGCATATCATCTTGAGAT 58.017 47.619 24.80 0.00 34.56 2.75
21 22 3.341823 GCCGGCATATCATCTTGAGATT 58.658 45.455 24.80 0.00 31.21 2.40
22 23 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
23 24 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
24 25 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
25 26 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
26 27 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
27 28 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
28 29 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
29 30 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
30 31 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
31 32 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
33 34 7.993821 TCATCTTGAGATTTACGAAGTCATC 57.006 36.000 0.00 0.00 35.39 2.92
34 35 6.693113 TCATCTTGAGATTTACGAAGTCATCG 59.307 38.462 0.00 0.00 44.39 3.84
41 42 3.601981 CGAAGTCATCGTAGGCGC 58.398 61.111 0.00 0.00 46.52 6.53
42 43 1.944676 CGAAGTCATCGTAGGCGCC 60.945 63.158 21.89 21.89 46.52 6.53
43 44 1.437986 GAAGTCATCGTAGGCGCCT 59.562 57.895 34.85 34.85 38.14 5.52
44 45 0.595310 GAAGTCATCGTAGGCGCCTC 60.595 60.000 36.73 23.04 38.14 4.70
45 46 2.017559 AAGTCATCGTAGGCGCCTCC 62.018 60.000 36.73 23.04 38.14 4.30
47 48 2.194212 TCATCGTAGGCGCCTCCTC 61.194 63.158 36.73 22.80 43.20 3.71
48 49 3.288290 ATCGTAGGCGCCTCCTCG 61.288 66.667 36.73 32.16 43.20 4.63
49 50 4.790962 TCGTAGGCGCCTCCTCGT 62.791 66.667 36.73 11.27 43.20 4.18
50 51 4.253257 CGTAGGCGCCTCCTCGTC 62.253 72.222 36.73 15.88 43.20 4.20
51 52 4.253257 GTAGGCGCCTCCTCGTCG 62.253 72.222 36.73 0.00 43.20 5.12
52 53 4.478371 TAGGCGCCTCCTCGTCGA 62.478 66.667 36.73 10.36 43.20 4.20
58 59 2.749044 CCTCCTCGTCGACGGGAA 60.749 66.667 37.97 19.87 43.86 3.97
59 60 2.484203 CTCCTCGTCGACGGGAAC 59.516 66.667 37.97 0.00 43.86 3.62
72 73 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
73 74 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
74 75 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
75 76 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
76 77 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
77 78 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
78 79 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
79 80 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
80 81 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
81 82 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
82 83 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
83 84 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
84 85 1.699656 CTCCCACTGAAAGCGCATCG 61.700 60.000 11.47 6.82 37.60 3.84
95 96 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
96 97 1.300620 CGCATCGCCGGAAATCCTA 60.301 57.895 5.05 0.00 0.00 2.94
97 98 0.878523 CGCATCGCCGGAAATCCTAA 60.879 55.000 5.05 0.00 0.00 2.69
98 99 1.305201 GCATCGCCGGAAATCCTAAA 58.695 50.000 5.05 0.00 0.00 1.85
99 100 1.673920 GCATCGCCGGAAATCCTAAAA 59.326 47.619 5.05 0.00 0.00 1.52
100 101 2.293399 GCATCGCCGGAAATCCTAAAAT 59.707 45.455 5.05 0.00 0.00 1.82
101 102 3.500680 GCATCGCCGGAAATCCTAAAATA 59.499 43.478 5.05 0.00 0.00 1.40
102 103 4.023536 GCATCGCCGGAAATCCTAAAATAA 60.024 41.667 5.05 0.00 0.00 1.40
103 104 5.506649 GCATCGCCGGAAATCCTAAAATAAA 60.507 40.000 5.05 0.00 0.00 1.40
104 105 6.677913 CATCGCCGGAAATCCTAAAATAAAT 58.322 36.000 5.05 0.00 0.00 1.40
105 106 6.308371 TCGCCGGAAATCCTAAAATAAATC 57.692 37.500 5.05 0.00 0.00 2.17
106 107 5.239963 TCGCCGGAAATCCTAAAATAAATCC 59.760 40.000 5.05 0.00 0.00 3.01
107 108 5.009210 CGCCGGAAATCCTAAAATAAATCCA 59.991 40.000 5.05 0.00 0.00 3.41
108 109 6.460399 CGCCGGAAATCCTAAAATAAATCCAA 60.460 38.462 5.05 0.00 0.00 3.53
109 110 7.269316 GCCGGAAATCCTAAAATAAATCCAAA 58.731 34.615 5.05 0.00 0.00 3.28
110 111 7.766738 GCCGGAAATCCTAAAATAAATCCAAAA 59.233 33.333 5.05 0.00 0.00 2.44
111 112 9.660180 CCGGAAATCCTAAAATAAATCCAAAAA 57.340 29.630 0.00 0.00 0.00 1.94
122 123 8.715191 AAATAAATCCAAAAATAATGCGAGCA 57.285 26.923 0.00 0.00 0.00 4.26
123 124 7.698836 ATAAATCCAAAAATAATGCGAGCAC 57.301 32.000 0.00 0.00 0.00 4.40
124 125 3.502191 TCCAAAAATAATGCGAGCACC 57.498 42.857 0.00 0.00 0.00 5.01
125 126 2.822561 TCCAAAAATAATGCGAGCACCA 59.177 40.909 0.00 0.00 0.00 4.17
126 127 3.119531 TCCAAAAATAATGCGAGCACCAG 60.120 43.478 0.00 0.00 0.00 4.00
127 128 3.181397 CAAAAATAATGCGAGCACCAGG 58.819 45.455 0.00 0.00 0.00 4.45
128 129 2.418368 AAATAATGCGAGCACCAGGA 57.582 45.000 0.00 0.00 0.00 3.86
129 130 2.645838 AATAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
130 131 2.645838 ATAATGCGAGCACCAGGATT 57.354 45.000 0.00 0.00 33.17 3.01
131 132 2.418368 TAATGCGAGCACCAGGATTT 57.582 45.000 0.00 0.00 31.11 2.17
132 133 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
133 134 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
134 135 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
135 136 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
136 137 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
137 138 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
138 139 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
143 144 2.584835 CAGGATTTGAACCCTGGTGA 57.415 50.000 0.00 0.00 44.68 4.02
144 145 2.440409 CAGGATTTGAACCCTGGTGAG 58.560 52.381 0.00 0.00 44.68 3.51
145 146 2.065799 AGGATTTGAACCCTGGTGAGT 58.934 47.619 0.00 0.00 0.00 3.41
146 147 2.447047 AGGATTTGAACCCTGGTGAGTT 59.553 45.455 0.00 0.00 0.00 3.01
147 148 2.558359 GGATTTGAACCCTGGTGAGTTG 59.442 50.000 0.00 0.00 0.00 3.16
148 149 2.065899 TTTGAACCCTGGTGAGTTGG 57.934 50.000 0.00 0.00 0.00 3.77
149 150 1.217916 TTGAACCCTGGTGAGTTGGA 58.782 50.000 0.00 0.00 0.00 3.53
150 151 0.764890 TGAACCCTGGTGAGTTGGAG 59.235 55.000 0.00 0.00 0.00 3.86
151 152 1.056660 GAACCCTGGTGAGTTGGAGA 58.943 55.000 0.00 0.00 0.00 3.71
152 153 1.630878 GAACCCTGGTGAGTTGGAGAT 59.369 52.381 0.00 0.00 0.00 2.75
153 154 2.642171 ACCCTGGTGAGTTGGAGATA 57.358 50.000 0.00 0.00 0.00 1.98
154 155 2.188817 ACCCTGGTGAGTTGGAGATAC 58.811 52.381 0.00 0.00 0.00 2.24
155 156 1.486726 CCCTGGTGAGTTGGAGATACC 59.513 57.143 0.00 0.00 39.54 2.73
165 166 1.568504 TGGAGATACCACTGTCCACC 58.431 55.000 0.00 0.00 44.64 4.61
166 167 1.078823 TGGAGATACCACTGTCCACCT 59.921 52.381 0.00 0.00 44.64 4.00
167 168 2.313643 TGGAGATACCACTGTCCACCTA 59.686 50.000 0.00 0.00 44.64 3.08
168 169 3.245839 TGGAGATACCACTGTCCACCTAA 60.246 47.826 0.00 0.00 44.64 2.69
169 170 3.132467 GGAGATACCACTGTCCACCTAAC 59.868 52.174 0.00 0.00 38.79 2.34
170 171 3.105283 AGATACCACTGTCCACCTAACC 58.895 50.000 0.00 0.00 0.00 2.85
171 172 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
172 173 1.513858 ACCACTGTCCACCTAACCAA 58.486 50.000 0.00 0.00 0.00 3.67
173 174 1.142262 ACCACTGTCCACCTAACCAAC 59.858 52.381 0.00 0.00 0.00 3.77
174 175 1.420138 CCACTGTCCACCTAACCAACT 59.580 52.381 0.00 0.00 0.00 3.16
175 176 2.550208 CCACTGTCCACCTAACCAACTC 60.550 54.545 0.00 0.00 0.00 3.01
176 177 2.104111 CACTGTCCACCTAACCAACTCA 59.896 50.000 0.00 0.00 0.00 3.41
177 178 2.775384 ACTGTCCACCTAACCAACTCAA 59.225 45.455 0.00 0.00 0.00 3.02
178 179 3.139077 CTGTCCACCTAACCAACTCAAC 58.861 50.000 0.00 0.00 0.00 3.18
179 180 2.158726 TGTCCACCTAACCAACTCAACC 60.159 50.000 0.00 0.00 0.00 3.77
180 181 2.128535 TCCACCTAACCAACTCAACCA 58.871 47.619 0.00 0.00 0.00 3.67
181 182 2.158726 TCCACCTAACCAACTCAACCAC 60.159 50.000 0.00 0.00 0.00 4.16
182 183 2.422235 CCACCTAACCAACTCAACCACA 60.422 50.000 0.00 0.00 0.00 4.17
183 184 2.878406 CACCTAACCAACTCAACCACAG 59.122 50.000 0.00 0.00 0.00 3.66
184 185 2.158667 ACCTAACCAACTCAACCACAGG 60.159 50.000 0.00 0.00 0.00 4.00
185 186 2.158667 CCTAACCAACTCAACCACAGGT 60.159 50.000 0.00 0.00 37.65 4.00
194 195 3.412722 AACCACAGGTTGATTCGCA 57.587 47.368 0.00 0.00 45.07 5.10
195 196 1.238439 AACCACAGGTTGATTCGCAG 58.762 50.000 0.00 0.00 45.07 5.18
196 197 1.237285 ACCACAGGTTGATTCGCAGC 61.237 55.000 0.00 0.00 27.29 5.25
200 201 2.877691 GGTTGATTCGCAGCCACC 59.122 61.111 0.00 0.00 46.26 4.61
201 202 1.675641 GGTTGATTCGCAGCCACCT 60.676 57.895 0.00 0.00 46.26 4.00
202 203 1.503542 GTTGATTCGCAGCCACCTG 59.496 57.895 0.00 0.00 42.13 4.00
213 214 3.046280 GCCACCTGCTACTCGTAAC 57.954 57.895 0.00 0.00 36.87 2.50
214 215 0.531200 GCCACCTGCTACTCGTAACT 59.469 55.000 0.00 0.00 36.87 2.24
215 216 1.747355 GCCACCTGCTACTCGTAACTA 59.253 52.381 0.00 0.00 36.87 2.24
216 217 2.479219 GCCACCTGCTACTCGTAACTAC 60.479 54.545 0.00 0.00 36.87 2.73
217 218 2.098770 CCACCTGCTACTCGTAACTACC 59.901 54.545 0.00 0.00 0.00 3.18
227 228 5.641783 ACTCGTAACTACCTTTTCCTCTC 57.358 43.478 0.00 0.00 0.00 3.20
233 234 6.072064 CGTAACTACCTTTTCCTCTCTCAGAA 60.072 42.308 0.00 0.00 0.00 3.02
262 263 2.990066 AGTATTGCCACTCCACTAGC 57.010 50.000 0.00 0.00 0.00 3.42
299 300 4.684242 CGGAAGGTTGGAAGCATTTTAAAC 59.316 41.667 0.00 0.00 0.00 2.01
300 301 5.508994 CGGAAGGTTGGAAGCATTTTAAACT 60.509 40.000 0.00 0.00 0.00 2.66
322 323 1.627864 TGGAAAAGGGCTAAAGGCAC 58.372 50.000 5.85 0.00 46.51 5.01
332 333 1.272258 GCTAAAGGCACCCCCACTTTA 60.272 52.381 0.00 0.00 41.35 1.85
334 335 0.857675 AAAGGCACCCCCACTTTAGT 59.142 50.000 0.00 0.00 33.05 2.24
339 340 1.616865 GCACCCCCACTTTAGTTTTCC 59.383 52.381 0.00 0.00 0.00 3.13
356 357 3.290948 TTCCCCACCGAATAAAGGATG 57.709 47.619 0.00 0.00 0.00 3.51
362 363 5.830991 CCCCACCGAATAAAGGATGAATAAA 59.169 40.000 0.00 0.00 0.00 1.40
369 370 7.351981 CGAATAAAGGATGAATAAACATCGCA 58.648 34.615 0.00 0.00 45.07 5.10
401 402 4.999950 GCCTTTCTCTCAATCTTCAGTTCA 59.000 41.667 0.00 0.00 0.00 3.18
402 403 5.647225 GCCTTTCTCTCAATCTTCAGTTCAT 59.353 40.000 0.00 0.00 0.00 2.57
404 405 7.626028 GCCTTTCTCTCAATCTTCAGTTCATTC 60.626 40.741 0.00 0.00 0.00 2.67
405 406 7.389884 CCTTTCTCTCAATCTTCAGTTCATTCA 59.610 37.037 0.00 0.00 0.00 2.57
406 407 8.859236 TTTCTCTCAATCTTCAGTTCATTCAT 57.141 30.769 0.00 0.00 0.00 2.57
408 409 8.489990 TCTCTCAATCTTCAGTTCATTCATTC 57.510 34.615 0.00 0.00 0.00 2.67
409 410 8.098912 TCTCTCAATCTTCAGTTCATTCATTCA 58.901 33.333 0.00 0.00 0.00 2.57
410 411 8.265165 TCTCAATCTTCAGTTCATTCATTCAG 57.735 34.615 0.00 0.00 0.00 3.02
411 412 6.849502 TCAATCTTCAGTTCATTCATTCAGC 58.150 36.000 0.00 0.00 0.00 4.26
412 413 6.431852 TCAATCTTCAGTTCATTCATTCAGCA 59.568 34.615 0.00 0.00 0.00 4.41
417 418 2.161012 AGTTCATTCATTCAGCACAGCG 59.839 45.455 0.00 0.00 0.00 5.18
444 445 7.481798 CGCACCTGTATTTATCTGTTTTTCTTC 59.518 37.037 0.00 0.00 0.00 2.87
451 452 9.214953 GTATTTATCTGTTTTTCTTCTGCATCG 57.785 33.333 0.00 0.00 0.00 3.84
453 454 4.732285 TCTGTTTTTCTTCTGCATCGAC 57.268 40.909 0.00 0.00 0.00 4.20
456 457 3.250762 TGTTTTTCTTCTGCATCGACCTG 59.749 43.478 0.00 0.00 0.00 4.00
457 458 2.839486 TTTCTTCTGCATCGACCTGT 57.161 45.000 0.00 0.00 0.00 4.00
458 459 2.084610 TTCTTCTGCATCGACCTGTG 57.915 50.000 0.00 0.00 0.00 3.66
459 460 0.969149 TCTTCTGCATCGACCTGTGT 59.031 50.000 0.00 0.00 0.00 3.72
460 461 2.167662 TCTTCTGCATCGACCTGTGTA 58.832 47.619 0.00 0.00 0.00 2.90
461 462 2.094700 TCTTCTGCATCGACCTGTGTAC 60.095 50.000 0.00 0.00 0.00 2.90
478 479 7.874016 ACCTGTGTACGTATTTATCTGTTTGAA 59.126 33.333 0.00 0.00 0.00 2.69
482 483 9.350357 GTGTACGTATTTATCTGTTTGAAGAGA 57.650 33.333 0.00 0.00 32.47 3.10
486 487 7.333672 ACGTATTTATCTGTTTGAAGAGAACCC 59.666 37.037 0.00 0.00 31.63 4.11
487 488 6.743575 ATTTATCTGTTTGAAGAGAACCCG 57.256 37.500 0.00 0.00 31.63 5.28
488 489 3.771577 ATCTGTTTGAAGAGAACCCGT 57.228 42.857 0.00 0.00 31.63 5.28
489 490 4.884668 ATCTGTTTGAAGAGAACCCGTA 57.115 40.909 0.00 0.00 31.63 4.02
490 491 3.986277 TCTGTTTGAAGAGAACCCGTAC 58.014 45.455 0.00 0.00 0.00 3.67
491 492 2.729882 CTGTTTGAAGAGAACCCGTACG 59.270 50.000 8.69 8.69 0.00 3.67
508 509 2.238245 ACGAGCTTTACGTACACGAG 57.762 50.000 9.04 0.00 42.17 4.18
509 510 1.800586 ACGAGCTTTACGTACACGAGA 59.199 47.619 9.04 0.00 42.17 4.04
510 511 2.224079 ACGAGCTTTACGTACACGAGAA 59.776 45.455 9.04 0.00 42.17 2.87
511 512 2.587241 CGAGCTTTACGTACACGAGAAC 59.413 50.000 9.04 0.00 43.02 3.01
551 552 3.419759 CCGTGTGCTACCAACCGC 61.420 66.667 0.00 0.00 0.00 5.68
593 594 4.624364 CCCACAGCAGCACCGTGA 62.624 66.667 1.65 0.00 32.23 4.35
594 595 2.591429 CCACAGCAGCACCGTGAA 60.591 61.111 1.65 0.00 32.23 3.18
595 596 2.633657 CACAGCAGCACCGTGAAC 59.366 61.111 1.65 0.00 32.23 3.18
600 601 0.882042 AGCAGCACCGTGAACTGAAG 60.882 55.000 1.65 0.00 33.10 3.02
624 625 0.799534 CAAGCATAAACGCCAGCAGC 60.800 55.000 0.00 0.00 38.52 5.25
634 635 2.749682 CCAGCAGCCAGTACACCA 59.250 61.111 0.00 0.00 0.00 4.17
635 636 1.672356 CCAGCAGCCAGTACACCAC 60.672 63.158 0.00 0.00 0.00 4.16
636 637 1.071299 CAGCAGCCAGTACACCACA 59.929 57.895 0.00 0.00 0.00 4.17
637 638 0.952497 CAGCAGCCAGTACACCACAG 60.952 60.000 0.00 0.00 0.00 3.66
638 639 1.071471 GCAGCCAGTACACCACAGT 59.929 57.895 0.00 0.00 0.00 3.55
639 640 0.320374 GCAGCCAGTACACCACAGTA 59.680 55.000 0.00 0.00 0.00 2.74
640 641 1.939838 GCAGCCAGTACACCACAGTAC 60.940 57.143 0.00 0.00 43.61 2.73
641 642 0.601558 AGCCAGTACACCACAGTACG 59.398 55.000 0.00 0.00 46.85 3.67
642 643 0.316204 GCCAGTACACCACAGTACGT 59.684 55.000 0.00 0.00 46.85 3.57
643 644 1.541147 GCCAGTACACCACAGTACGTA 59.459 52.381 0.00 0.00 46.85 3.57
644 645 2.669391 GCCAGTACACCACAGTACGTAC 60.669 54.545 18.10 18.10 46.85 3.67
645 646 2.413239 CCAGTACACCACAGTACGTACG 60.413 54.545 19.49 15.01 46.85 3.67
646 647 2.480037 CAGTACACCACAGTACGTACGA 59.520 50.000 24.41 2.43 46.85 3.43
647 648 3.125829 CAGTACACCACAGTACGTACGAT 59.874 47.826 24.41 9.33 46.85 3.73
648 649 2.907910 ACACCACAGTACGTACGATC 57.092 50.000 24.41 13.80 0.00 3.69
649 650 2.153645 ACACCACAGTACGTACGATCA 58.846 47.619 24.41 3.39 0.00 2.92
650 651 2.095567 ACACCACAGTACGTACGATCAC 60.096 50.000 24.41 15.77 0.00 3.06
652 653 1.394572 CCACAGTACGTACGATCACGA 59.605 52.381 24.41 0.00 44.69 4.35
653 654 2.425283 CACAGTACGTACGATCACGAC 58.575 52.381 24.41 9.32 44.69 4.34
654 655 2.093310 CACAGTACGTACGATCACGACT 59.907 50.000 24.41 11.35 44.69 4.18
655 656 2.093310 ACAGTACGTACGATCACGACTG 59.907 50.000 24.41 22.39 45.26 3.51
675 676 1.320555 GCGTACGATGCAGTACAACAG 59.679 52.381 21.65 2.17 45.25 3.16
676 677 1.917955 CGTACGATGCAGTACAACAGG 59.082 52.381 10.44 0.00 45.25 4.00
677 678 1.659098 GTACGATGCAGTACAACAGGC 59.341 52.381 10.50 0.00 44.59 4.85
678 679 1.014044 ACGATGCAGTACAACAGGCG 61.014 55.000 0.00 3.95 0.00 5.52
679 680 1.425428 GATGCAGTACAACAGGCGC 59.575 57.895 0.00 0.00 0.00 6.53
680 681 1.298157 GATGCAGTACAACAGGCGCA 61.298 55.000 10.83 0.00 0.00 6.09
681 682 1.300971 ATGCAGTACAACAGGCGCAG 61.301 55.000 10.83 3.04 32.10 5.18
700 701 1.280444 CCCGTTTGGTGCACGTAAC 59.720 57.895 11.45 15.44 35.81 2.50
705 706 2.465839 CGTTTGGTGCACGTAACAAATG 59.534 45.455 23.78 20.95 35.56 2.32
706 707 2.783828 TTGGTGCACGTAACAAATGG 57.216 45.000 11.45 0.00 0.00 3.16
707 708 1.968704 TGGTGCACGTAACAAATGGA 58.031 45.000 11.45 0.00 0.00 3.41
708 709 2.509569 TGGTGCACGTAACAAATGGAT 58.490 42.857 11.45 0.00 0.00 3.41
713 714 3.565902 TGCACGTAACAAATGGATCACAA 59.434 39.130 0.00 0.00 0.00 3.33
731 732 4.437682 ACAAGGGAAATGTGAGAGTCAA 57.562 40.909 0.00 0.00 0.00 3.18
732 733 4.392940 ACAAGGGAAATGTGAGAGTCAAG 58.607 43.478 0.00 0.00 0.00 3.02
741 746 1.739562 GAGAGTCAAGCCACCGCAG 60.740 63.158 0.00 0.00 37.52 5.18
822 828 1.682087 CGTCCCATTTTCTCCCCTTCC 60.682 57.143 0.00 0.00 0.00 3.46
823 829 1.357761 GTCCCATTTTCTCCCCTTCCA 59.642 52.381 0.00 0.00 0.00 3.53
824 830 1.357761 TCCCATTTTCTCCCCTTCCAC 59.642 52.381 0.00 0.00 0.00 4.02
903 917 1.878656 GAGTCCACCCACACTCTCCG 61.879 65.000 0.00 0.00 36.80 4.63
918 932 4.465446 CCGCCTCCTCCTCCTCCA 62.465 72.222 0.00 0.00 0.00 3.86
923 937 2.037367 TCCTCCTCCTCCACACCG 59.963 66.667 0.00 0.00 0.00 4.94
925 939 2.997315 CTCCTCCTCCACACCGCA 60.997 66.667 0.00 0.00 0.00 5.69
926 940 2.997315 TCCTCCTCCACACCGCAG 60.997 66.667 0.00 0.00 0.00 5.18
927 941 4.767255 CCTCCTCCACACCGCAGC 62.767 72.222 0.00 0.00 0.00 5.25
928 942 4.767255 CTCCTCCACACCGCAGCC 62.767 72.222 0.00 0.00 0.00 4.85
935 949 3.387091 ACACCGCAGCCACCGATA 61.387 61.111 0.00 0.00 0.00 2.92
1083 1101 4.157958 GCAGCTTTCTCCAGCGCG 62.158 66.667 0.00 0.00 45.24 6.86
1339 1390 2.290450 TGTTCCCCCAATTTACTCCGAC 60.290 50.000 0.00 0.00 0.00 4.79
1387 1438 2.483197 GGTTCCAACGGCGTTTGGT 61.483 57.895 24.49 0.00 45.60 3.67
1403 1454 2.158959 GGTCGATTCACGCGTCTGG 61.159 63.158 9.86 0.00 42.26 3.86
1506 1560 3.902112 CCCCCACCAACACTGCCT 61.902 66.667 0.00 0.00 0.00 4.75
1507 1561 2.198426 CCCCACCAACACTGCCTT 59.802 61.111 0.00 0.00 0.00 4.35
1537 1591 2.109126 GCTGCTGCTACCTTTCCCG 61.109 63.158 8.53 0.00 36.03 5.14
1557 1611 1.421410 ATCGTTTGATCGCACGCCTC 61.421 55.000 10.79 0.00 36.32 4.70
1561 1615 2.852495 TTTGATCGCACGCCTCCTCC 62.852 60.000 0.00 0.00 0.00 4.30
1719 1773 7.042590 CGTTGTGTAGTGTAGTAAATCCAAACA 60.043 37.037 0.00 0.00 0.00 2.83
1750 2489 8.684520 AGTACTAATGTAGTAAAGTCTTGCGAT 58.315 33.333 0.00 0.00 42.45 4.58
1764 2503 0.448990 TGCGATGCTTTCTGTCATGC 59.551 50.000 0.00 0.00 0.00 4.06
1797 2536 5.458041 AACAGCAAATAAGCATGAACTGT 57.542 34.783 0.00 0.00 38.70 3.55
1800 2539 5.093457 CAGCAAATAAGCATGAACTGTCTG 58.907 41.667 0.00 0.00 36.85 3.51
1814 2553 4.514781 ACTGTCTGATAACTACGTGCAA 57.485 40.909 0.00 0.00 0.00 4.08
1819 2558 7.764443 ACTGTCTGATAACTACGTGCAATTATT 59.236 33.333 0.00 0.00 0.00 1.40
1820 2559 9.244799 CTGTCTGATAACTACGTGCAATTATTA 57.755 33.333 0.00 0.00 0.00 0.98
1821 2560 9.758651 TGTCTGATAACTACGTGCAATTATTAT 57.241 29.630 0.00 0.00 0.00 1.28
1898 2643 1.970639 TGCTCTCACTGCAGACTCC 59.029 57.895 23.35 3.90 35.31 3.85
1988 2733 3.066342 AGCATCATTGTCTGCATTGTAGC 59.934 43.478 13.65 0.00 40.88 3.58
2050 2795 3.942130 AACTTTTGGTGCTATTCTGCC 57.058 42.857 0.00 0.00 0.00 4.85
2152 2897 1.354368 GTCCCTGTTTTCCCTCCATCA 59.646 52.381 0.00 0.00 0.00 3.07
2242 2987 5.602145 TCCATCCAAATTCTTTGTCCTGTTT 59.398 36.000 0.00 0.00 38.98 2.83
2288 3033 2.991190 TCGTTTGCCGAGTAAGTGAATC 59.009 45.455 0.00 0.00 41.60 2.52
2290 3035 1.355971 TTGCCGAGTAAGTGAATCGC 58.644 50.000 0.00 0.00 35.18 4.58
2326 3071 6.577055 CGTTTGACACAAACACCATGTTATAG 59.423 38.462 21.45 3.40 40.14 1.31
2334 3079 7.064609 CACAAACACCATGTTATAGGACTGTAG 59.935 40.741 0.00 0.00 40.14 2.74
2347 3095 2.808543 GGACTGTAGTCAGCTTTGTTGG 59.191 50.000 13.51 0.00 46.47 3.77
2388 3137 2.509548 TGGCTATGGCAGGTACATCTTT 59.490 45.455 2.58 0.00 40.87 2.52
2445 3194 1.412343 AGTGCGGCCTTCAAAATGTTT 59.588 42.857 0.00 0.00 0.00 2.83
2451 3200 3.049912 GGCCTTCAAAATGTTTGACGTC 58.950 45.455 9.11 9.11 0.00 4.34
2507 3256 6.202188 CACTACTTTGTCTTATGAACACGGTT 59.798 38.462 0.00 0.00 0.00 4.44
2863 4988 2.169832 TTCTCTTGTCGCCCAGAAAG 57.830 50.000 0.00 0.00 0.00 2.62
2921 5046 6.206634 TCTGGCTTGTTAGTTGATGGTAAAAG 59.793 38.462 0.00 0.00 0.00 2.27
2934 5059 8.581578 GTTGATGGTAAAAGAAGGGTAATGAAA 58.418 33.333 0.00 0.00 0.00 2.69
2980 5106 6.750039 CGGTTGTTTTGTTGTTCTTATCTGTT 59.250 34.615 0.00 0.00 0.00 3.16
3179 5305 7.610305 GGGAATGAACCTCTACACTTTGATAAA 59.390 37.037 0.00 0.00 0.00 1.40
3221 5347 5.521372 GGAATTGCATGAAGAGGTAATTTGC 59.479 40.000 0.00 0.00 29.76 3.68
3222 5348 5.927281 ATTGCATGAAGAGGTAATTTGCT 57.073 34.783 0.00 0.00 0.00 3.91
3223 5349 5.726980 TTGCATGAAGAGGTAATTTGCTT 57.273 34.783 0.00 0.00 0.00 3.91
3255 5381 6.349611 CCATATTCCTTTTGTGGACTTCACTG 60.350 42.308 0.00 0.00 46.20 3.66
3261 5387 1.344953 TGTGGACTTCACTGGGCACT 61.345 55.000 0.00 0.00 46.20 4.40
3311 5437 3.561310 GTGACTTGTCAGAAAGCATGTCA 59.439 43.478 3.45 8.50 43.03 3.58
3316 5442 5.180117 ACTTGTCAGAAAGCATGTCATGTAC 59.820 40.000 14.26 0.00 0.00 2.90
3411 5611 1.713597 GTATTTGCAAACTGGCTGCC 58.286 50.000 15.41 12.87 39.13 4.85
3428 5628 4.496840 GGCTGCCGGTACATAATGTTTTAC 60.497 45.833 1.35 0.00 0.00 2.01
3429 5629 4.784079 GCTGCCGGTACATAATGTTTTACG 60.784 45.833 1.90 0.00 0.00 3.18
3618 5826 5.664294 TTTACAATTGCAATCATCCAGCT 57.336 34.783 13.38 0.00 0.00 4.24
3619 5827 3.520290 ACAATTGCAATCATCCAGCTG 57.480 42.857 13.38 6.78 0.00 4.24
3625 5833 3.159472 TGCAATCATCCAGCTGTTTTCT 58.841 40.909 13.81 0.00 0.00 2.52
3818 6026 6.211184 AGCAAGCTACTTGATAGAGCTGATAT 59.789 38.462 11.38 0.00 45.74 1.63
3963 6171 4.524328 ACTTTAGGAGTTCAAGGCATTTGG 59.476 41.667 1.01 0.00 33.92 3.28
4074 6282 3.302935 CGTGCAGCACATCATGTAAGATC 60.303 47.826 25.19 0.00 33.40 2.75
4091 6299 7.446769 TGTAAGATCTTGTACCAAGCTTGTTA 58.553 34.615 24.35 12.81 0.00 2.41
4092 6300 6.803154 AAGATCTTGTACCAAGCTTGTTAC 57.197 37.500 23.13 23.13 0.00 2.50
4109 6317 8.803012 GCTTGTTACTTAAGCGTTTAGATAAC 57.197 34.615 1.29 14.91 40.83 1.89
4136 6408 7.379750 ACTACTAAACTTCTAGCTGTCCTTTG 58.620 38.462 0.00 0.00 0.00 2.77
4210 6482 5.540911 TGATTTCATGCCTTTTCTGGTTTC 58.459 37.500 0.00 0.00 0.00 2.78
4547 6819 7.540474 TCATCCAGTCTTGTTATAGTATCCC 57.460 40.000 0.00 0.00 0.00 3.85
4555 6827 7.123847 AGTCTTGTTATAGTATCCCGTTCTGTT 59.876 37.037 0.00 0.00 0.00 3.16
4561 6833 6.786967 ATAGTATCCCGTTCTGTTACTTGT 57.213 37.500 0.00 0.00 0.00 3.16
4562 6834 5.479124 AGTATCCCGTTCTGTTACTTGTT 57.521 39.130 0.00 0.00 0.00 2.83
4563 6835 6.594788 AGTATCCCGTTCTGTTACTTGTTA 57.405 37.500 0.00 0.00 0.00 2.41
4564 6836 6.393171 AGTATCCCGTTCTGTTACTTGTTAC 58.607 40.000 0.00 0.00 0.00 2.50
4580 6852 1.623811 GTTACTGCTCAGGAGTGGGAA 59.376 52.381 9.51 0.00 0.00 3.97
4644 6916 6.757237 TCCGGTTGTAAATAGTGTCTTTGTA 58.243 36.000 0.00 0.00 0.00 2.41
4645 6917 6.869913 TCCGGTTGTAAATAGTGTCTTTGTAG 59.130 38.462 0.00 0.00 0.00 2.74
4662 6934 8.178964 GTCTTTGTAGTAGTCTCTCAGTACATG 58.821 40.741 0.00 0.00 33.71 3.21
4726 6998 7.762159 TGTAAGTTTCAAACCTTGTCCATTTTC 59.238 33.333 0.00 0.00 0.00 2.29
4909 7184 5.041191 AGATAGGCAAAATACTGAGGTGG 57.959 43.478 0.00 0.00 0.00 4.61
4923 7198 4.018050 ACTGAGGTGGCATTTCTCCTTTAT 60.018 41.667 11.17 0.00 0.00 1.40
4924 7199 4.526970 TGAGGTGGCATTTCTCCTTTATC 58.473 43.478 11.17 0.00 0.00 1.75
4925 7200 4.228210 TGAGGTGGCATTTCTCCTTTATCT 59.772 41.667 11.17 0.00 0.00 1.98
4926 7201 4.786425 AGGTGGCATTTCTCCTTTATCTC 58.214 43.478 0.00 0.00 0.00 2.75
4927 7202 3.885901 GGTGGCATTTCTCCTTTATCTCC 59.114 47.826 0.00 0.00 0.00 3.71
4928 7203 4.385754 GGTGGCATTTCTCCTTTATCTCCT 60.386 45.833 0.00 0.00 0.00 3.69
4929 7204 5.196695 GTGGCATTTCTCCTTTATCTCCTT 58.803 41.667 0.00 0.00 0.00 3.36
4930 7205 5.654209 GTGGCATTTCTCCTTTATCTCCTTT 59.346 40.000 0.00 0.00 0.00 3.11
4931 7206 6.828785 GTGGCATTTCTCCTTTATCTCCTTTA 59.171 38.462 0.00 0.00 0.00 1.85
4934 7209 8.409371 GGCATTTCTCCTTTATCTCCTTTAAAG 58.591 37.037 8.32 8.32 36.73 1.85
4949 7224 3.926058 TTAAAGGATGCTGGAGTACCC 57.074 47.619 0.00 0.00 34.81 3.69
4970 7245 1.056660 CCTTATGGCGGTATCCACCT 58.943 55.000 0.00 0.00 43.33 4.00
4981 7256 1.134788 GTATCCACCTCCTCCAACACG 60.135 57.143 0.00 0.00 0.00 4.49
4997 7272 2.660552 CGCTCCGTGTTGTTCGGT 60.661 61.111 4.36 0.00 46.86 4.69
5026 7301 2.281345 CTGATGGAGATGGGGCGC 60.281 66.667 0.00 0.00 0.00 6.53
5048 7323 1.270550 CCTCATTGTGTTGGTGGCTTC 59.729 52.381 0.00 0.00 0.00 3.86
5059 7334 1.688735 TGGTGGCTTCGAGATCTATGG 59.311 52.381 0.00 0.00 0.00 2.74
5060 7335 1.689273 GGTGGCTTCGAGATCTATGGT 59.311 52.381 0.00 0.00 0.00 3.55
5061 7336 2.103263 GGTGGCTTCGAGATCTATGGTT 59.897 50.000 0.00 0.00 0.00 3.67
5062 7337 3.385577 GTGGCTTCGAGATCTATGGTTC 58.614 50.000 0.00 0.00 0.00 3.62
5063 7338 3.031013 TGGCTTCGAGATCTATGGTTCA 58.969 45.455 0.00 0.00 0.00 3.18
5064 7339 3.643320 TGGCTTCGAGATCTATGGTTCAT 59.357 43.478 0.00 0.00 0.00 2.57
5065 7340 4.101585 TGGCTTCGAGATCTATGGTTCATT 59.898 41.667 0.00 0.00 0.00 2.57
5066 7341 5.304357 TGGCTTCGAGATCTATGGTTCATTA 59.696 40.000 0.00 0.00 0.00 1.90
5067 7342 6.014242 TGGCTTCGAGATCTATGGTTCATTAT 60.014 38.462 0.00 0.00 0.00 1.28
5110 7385 9.515020 TGAATTATCGTATTTTCTTTTGGCATC 57.485 29.630 0.00 0.00 0.00 3.91
5123 7398 9.558396 TTTCTTTTGGCATCTATTGAATTGTTT 57.442 25.926 0.00 0.00 0.00 2.83
5163 7446 6.331845 TGCATTGGTGATGAATTTGTGATAC 58.668 36.000 0.00 0.00 38.03 2.24
5172 7455 7.859377 GTGATGAATTTGTGATACATGATGGAC 59.141 37.037 0.00 0.00 0.00 4.02
5174 7457 4.818534 ATTTGTGATACATGATGGACGC 57.181 40.909 0.00 0.00 0.00 5.19
5175 7458 2.977772 TGTGATACATGATGGACGCA 57.022 45.000 0.00 0.00 0.00 5.24
5179 7462 3.059393 GTGATACATGATGGACGCACATG 60.059 47.826 0.00 0.00 44.42 3.21
5192 7475 4.977963 GGACGCACATGGAATTTGAATATG 59.022 41.667 0.00 0.00 0.00 1.78
5194 7477 5.824429 ACGCACATGGAATTTGAATATGAG 58.176 37.500 0.00 0.00 0.00 2.90
5197 7480 5.510179 GCACATGGAATTTGAATATGAGGGG 60.510 44.000 0.00 0.00 0.00 4.79
5211 7494 0.537371 GAGGGGTGTGGTTGTCCAAG 60.537 60.000 0.00 0.00 46.15 3.61
5226 7509 3.988976 TCCAAGAGGACAAATGAGGAG 57.011 47.619 0.00 0.00 39.61 3.69
5233 7516 2.304761 AGGACAAATGAGGAGCCGTTTA 59.695 45.455 0.00 0.00 0.00 2.01
5243 7526 0.788391 GAGCCGTTTAGTGTTGTCCG 59.212 55.000 0.00 0.00 0.00 4.79
5270 7558 2.989253 GGCGTTTGGAAGGGTGGG 60.989 66.667 0.00 0.00 0.00 4.61
5328 7616 9.028185 CCGTAGAGGTAATCACTTATGTTTAAC 57.972 37.037 0.00 0.00 30.66 2.01
5329 7617 9.577110 CGTAGAGGTAATCACTTATGTTTAACA 57.423 33.333 0.00 0.00 32.29 2.41
5340 7628 9.031537 TCACTTATGTTTAACAGATCTCTGGTA 57.968 33.333 11.66 6.51 43.15 3.25
5341 7629 9.307121 CACTTATGTTTAACAGATCTCTGGTAG 57.693 37.037 11.66 0.59 45.79 3.18
5342 7630 9.256228 ACTTATGTTTAACAGATCTCTGGTAGA 57.744 33.333 11.66 2.06 45.79 2.59
5346 7634 8.777865 TGTTTAACAGATCTCTGGTAGAAATG 57.222 34.615 11.66 0.00 45.79 2.32
5347 7635 8.375506 TGTTTAACAGATCTCTGGTAGAAATGT 58.624 33.333 11.66 0.00 45.79 2.71
5348 7636 9.871238 GTTTAACAGATCTCTGGTAGAAATGTA 57.129 33.333 11.66 0.00 45.79 2.29
5351 7639 8.083828 AACAGATCTCTGGTAGAAATGTATGT 57.916 34.615 11.66 0.00 43.15 2.29
5352 7640 8.543774 AACAGATCTCTGGTAGAAATGTATGTT 58.456 33.333 11.66 0.00 43.15 2.71
5353 7641 8.954950 CAGATCTCTGGTAGAAATGTATGTTT 57.045 34.615 0.00 0.00 40.20 2.83
5354 7642 9.039870 CAGATCTCTGGTAGAAATGTATGTTTC 57.960 37.037 0.00 0.00 40.20 2.78
5355 7643 8.207545 AGATCTCTGGTAGAAATGTATGTTTCC 58.792 37.037 0.00 0.00 38.55 3.13
5356 7644 7.252612 TCTCTGGTAGAAATGTATGTTTCCA 57.747 36.000 0.00 0.00 38.55 3.53
5357 7645 7.685481 TCTCTGGTAGAAATGTATGTTTCCAA 58.315 34.615 0.00 0.00 38.55 3.53
5358 7646 8.160765 TCTCTGGTAGAAATGTATGTTTCCAAA 58.839 33.333 0.00 0.00 38.55 3.28
5359 7647 8.698973 TCTGGTAGAAATGTATGTTTCCAAAA 57.301 30.769 0.00 0.00 38.55 2.44
5360 7648 9.308000 TCTGGTAGAAATGTATGTTTCCAAAAT 57.692 29.630 0.00 0.00 38.55 1.82
5361 7649 9.357652 CTGGTAGAAATGTATGTTTCCAAAATG 57.642 33.333 0.00 0.00 38.55 2.32
5362 7650 8.865090 TGGTAGAAATGTATGTTTCCAAAATGT 58.135 29.630 0.00 0.00 38.55 2.71
5366 7654 9.308000 AGAAATGTATGTTTCCAAAATGTAGGA 57.692 29.630 0.00 0.00 38.55 2.94
5367 7655 9.573133 GAAATGTATGTTTCCAAAATGTAGGAG 57.427 33.333 0.00 0.00 34.91 3.69
5368 7656 8.877864 AATGTATGTTTCCAAAATGTAGGAGA 57.122 30.769 0.00 0.00 34.91 3.71
5369 7657 7.921786 TGTATGTTTCCAAAATGTAGGAGAG 57.078 36.000 0.00 0.00 34.91 3.20
5370 7658 7.458397 TGTATGTTTCCAAAATGTAGGAGAGT 58.542 34.615 0.00 0.00 34.91 3.24
5371 7659 7.942341 TGTATGTTTCCAAAATGTAGGAGAGTT 59.058 33.333 0.00 0.00 34.91 3.01
5372 7660 7.839680 ATGTTTCCAAAATGTAGGAGAGTTT 57.160 32.000 0.00 0.00 34.91 2.66
5373 7661 7.272037 TGTTTCCAAAATGTAGGAGAGTTTC 57.728 36.000 0.00 0.00 34.91 2.78
5374 7662 6.831353 TGTTTCCAAAATGTAGGAGAGTTTCA 59.169 34.615 0.00 0.00 34.91 2.69
5375 7663 6.877611 TTCCAAAATGTAGGAGAGTTTCAC 57.122 37.500 0.00 0.00 34.91 3.18
5376 7664 6.187727 TCCAAAATGTAGGAGAGTTTCACT 57.812 37.500 0.00 0.00 0.00 3.41
5377 7665 7.311092 TCCAAAATGTAGGAGAGTTTCACTA 57.689 36.000 0.00 0.00 0.00 2.74
5378 7666 7.741785 TCCAAAATGTAGGAGAGTTTCACTAA 58.258 34.615 0.00 0.00 0.00 2.24
5379 7667 7.660208 TCCAAAATGTAGGAGAGTTTCACTAAC 59.340 37.037 0.00 0.00 36.99 2.34
5380 7668 7.444183 CCAAAATGTAGGAGAGTTTCACTAACA 59.556 37.037 0.00 0.00 39.30 2.41
5381 7669 8.836413 CAAAATGTAGGAGAGTTTCACTAACAA 58.164 33.333 0.00 0.00 39.30 2.83
5382 7670 9.574516 AAAATGTAGGAGAGTTTCACTAACAAT 57.425 29.630 0.00 0.00 39.30 2.71
5395 7683 9.783256 GTTTCACTAACAATATACAAACATCCC 57.217 33.333 0.00 0.00 36.71 3.85
5396 7684 7.780008 TCACTAACAATATACAAACATCCCG 57.220 36.000 0.00 0.00 0.00 5.14
5397 7685 7.332557 TCACTAACAATATACAAACATCCCGT 58.667 34.615 0.00 0.00 0.00 5.28
5398 7686 7.279090 TCACTAACAATATACAAACATCCCGTG 59.721 37.037 0.00 0.00 0.00 4.94
5399 7687 5.828299 AACAATATACAAACATCCCGTGG 57.172 39.130 0.00 0.00 0.00 4.94
5400 7688 4.850680 ACAATATACAAACATCCCGTGGT 58.149 39.130 0.00 0.00 0.00 4.16
5401 7689 5.991861 ACAATATACAAACATCCCGTGGTA 58.008 37.500 0.00 0.00 0.00 3.25
5402 7690 6.416415 ACAATATACAAACATCCCGTGGTAA 58.584 36.000 0.00 0.00 0.00 2.85
5403 7691 6.540914 ACAATATACAAACATCCCGTGGTAAG 59.459 38.462 0.00 0.00 0.00 2.34
5404 7692 4.829872 ATACAAACATCCCGTGGTAAGA 57.170 40.909 0.00 0.00 0.00 2.10
5405 7693 3.495434 ACAAACATCCCGTGGTAAGAA 57.505 42.857 0.00 0.00 0.00 2.52
5406 7694 4.028993 ACAAACATCCCGTGGTAAGAAT 57.971 40.909 0.00 0.00 0.00 2.40
5407 7695 4.403734 ACAAACATCCCGTGGTAAGAATT 58.596 39.130 0.00 0.00 0.00 2.17
5408 7696 4.830600 ACAAACATCCCGTGGTAAGAATTT 59.169 37.500 0.00 0.00 0.00 1.82
5409 7697 5.303333 ACAAACATCCCGTGGTAAGAATTTT 59.697 36.000 0.00 0.00 0.00 1.82
5410 7698 6.183360 ACAAACATCCCGTGGTAAGAATTTTT 60.183 34.615 0.00 0.00 0.00 1.94
5411 7699 5.385509 ACATCCCGTGGTAAGAATTTTTG 57.614 39.130 0.00 0.00 0.00 2.44
5412 7700 5.074115 ACATCCCGTGGTAAGAATTTTTGA 58.926 37.500 0.00 0.00 0.00 2.69
5413 7701 5.714806 ACATCCCGTGGTAAGAATTTTTGAT 59.285 36.000 0.00 0.00 0.00 2.57
5414 7702 6.887545 ACATCCCGTGGTAAGAATTTTTGATA 59.112 34.615 0.00 0.00 0.00 2.15
5415 7703 7.559897 ACATCCCGTGGTAAGAATTTTTGATAT 59.440 33.333 0.00 0.00 0.00 1.63
5416 7704 7.948034 TCCCGTGGTAAGAATTTTTGATATT 57.052 32.000 0.00 0.00 0.00 1.28
5417 7705 9.635404 ATCCCGTGGTAAGAATTTTTGATATTA 57.365 29.630 0.00 0.00 0.00 0.98
5418 7706 9.635404 TCCCGTGGTAAGAATTTTTGATATTAT 57.365 29.630 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
1 2 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
2 3 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
3 4 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
4 5 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
5 6 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
7 8 9.684448 GATGACTTCGTAAATCTCAAGATGATA 57.316 33.333 0.00 0.00 34.49 2.15
8 9 7.380870 CGATGACTTCGTAAATCTCAAGATGAT 59.619 37.037 2.72 0.00 43.01 2.45
9 10 6.693113 CGATGACTTCGTAAATCTCAAGATGA 59.307 38.462 2.72 0.00 43.01 2.92
10 11 6.861158 CGATGACTTCGTAAATCTCAAGATG 58.139 40.000 2.72 0.00 43.01 2.90
25 26 0.595310 GAGGCGCCTACGATGACTTC 60.595 60.000 32.97 9.38 43.93 3.01
26 27 1.437986 GAGGCGCCTACGATGACTT 59.562 57.895 32.97 2.04 43.93 3.01
27 28 2.491022 GGAGGCGCCTACGATGACT 61.491 63.158 32.97 3.02 43.93 3.41
28 29 2.027751 GGAGGCGCCTACGATGAC 59.972 66.667 32.97 15.36 43.93 3.06
41 42 2.749044 TTCCCGTCGACGAGGAGG 60.749 66.667 37.65 28.37 43.02 4.30
42 43 2.484203 GTTCCCGTCGACGAGGAG 59.516 66.667 37.65 20.95 43.02 3.69
43 44 3.425713 CGTTCCCGTCGACGAGGA 61.426 66.667 37.65 33.95 41.53 3.71
44 45 3.730761 ACGTTCCCGTCGACGAGG 61.731 66.667 37.65 32.46 46.28 4.63
56 57 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
57 58 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
58 59 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
59 60 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
60 61 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
61 62 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
62 63 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
63 64 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
64 65 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
65 66 1.699656 CGATGCGCTTTCAGTGGGAG 61.700 60.000 9.73 0.00 0.00 4.30
66 67 1.741401 CGATGCGCTTTCAGTGGGA 60.741 57.895 9.73 0.00 0.00 4.37
67 68 2.787249 CGATGCGCTTTCAGTGGG 59.213 61.111 9.73 0.00 0.00 4.61
78 79 0.878523 TTAGGATTTCCGGCGATGCG 60.879 55.000 9.30 0.00 42.08 4.73
79 80 1.305201 TTTAGGATTTCCGGCGATGC 58.695 50.000 9.30 0.00 42.08 3.91
80 81 5.682943 TTATTTTAGGATTTCCGGCGATG 57.317 39.130 9.30 0.00 42.08 3.84
81 82 6.072119 GGATTTATTTTAGGATTTCCGGCGAT 60.072 38.462 9.30 0.00 42.08 4.58
82 83 5.239963 GGATTTATTTTAGGATTTCCGGCGA 59.760 40.000 9.30 0.00 42.08 5.54
83 84 5.009210 TGGATTTATTTTAGGATTTCCGGCG 59.991 40.000 0.00 0.00 42.08 6.46
84 85 6.399639 TGGATTTATTTTAGGATTTCCGGC 57.600 37.500 0.00 0.00 42.08 6.13
85 86 9.660180 TTTTTGGATTTATTTTAGGATTTCCGG 57.340 29.630 0.00 0.00 42.08 5.14
96 97 9.160496 TGCTCGCATTATTTTTGGATTTATTTT 57.840 25.926 0.00 0.00 0.00 1.82
97 98 8.603181 GTGCTCGCATTATTTTTGGATTTATTT 58.397 29.630 0.00 0.00 0.00 1.40
98 99 7.224557 GGTGCTCGCATTATTTTTGGATTTATT 59.775 33.333 0.00 0.00 0.00 1.40
99 100 6.701400 GGTGCTCGCATTATTTTTGGATTTAT 59.299 34.615 0.00 0.00 0.00 1.40
100 101 6.039616 GGTGCTCGCATTATTTTTGGATTTA 58.960 36.000 0.00 0.00 0.00 1.40
101 102 4.869861 GGTGCTCGCATTATTTTTGGATTT 59.130 37.500 0.00 0.00 0.00 2.17
102 103 4.081752 TGGTGCTCGCATTATTTTTGGATT 60.082 37.500 0.00 0.00 0.00 3.01
103 104 3.446873 TGGTGCTCGCATTATTTTTGGAT 59.553 39.130 0.00 0.00 0.00 3.41
104 105 2.822561 TGGTGCTCGCATTATTTTTGGA 59.177 40.909 0.00 0.00 0.00 3.53
105 106 3.181397 CTGGTGCTCGCATTATTTTTGG 58.819 45.455 0.00 0.00 0.00 3.28
106 107 3.119531 TCCTGGTGCTCGCATTATTTTTG 60.120 43.478 0.00 0.00 0.00 2.44
107 108 3.088532 TCCTGGTGCTCGCATTATTTTT 58.911 40.909 0.00 0.00 0.00 1.94
108 109 2.722094 TCCTGGTGCTCGCATTATTTT 58.278 42.857 0.00 0.00 0.00 1.82
109 110 2.418368 TCCTGGTGCTCGCATTATTT 57.582 45.000 0.00 0.00 0.00 1.40
110 111 2.645838 ATCCTGGTGCTCGCATTATT 57.354 45.000 0.00 0.00 0.00 1.40
111 112 2.620115 CAAATCCTGGTGCTCGCATTAT 59.380 45.455 0.00 0.00 0.00 1.28
112 113 2.016318 CAAATCCTGGTGCTCGCATTA 58.984 47.619 0.00 0.00 0.00 1.90
113 114 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
114 115 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
115 116 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
116 117 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
117 118 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
118 119 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
119 120 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
120 121 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
125 126 2.065799 ACTCACCAGGGTTCAAATCCT 58.934 47.619 0.00 0.00 41.23 3.24
126 127 2.558359 CAACTCACCAGGGTTCAAATCC 59.442 50.000 0.00 0.00 0.00 3.01
127 128 2.558359 CCAACTCACCAGGGTTCAAATC 59.442 50.000 0.00 0.00 0.00 2.17
128 129 2.176798 TCCAACTCACCAGGGTTCAAAT 59.823 45.455 0.00 0.00 0.00 2.32
129 130 1.566703 TCCAACTCACCAGGGTTCAAA 59.433 47.619 0.00 0.00 0.00 2.69
130 131 1.142870 CTCCAACTCACCAGGGTTCAA 59.857 52.381 0.00 0.00 0.00 2.69
131 132 0.764890 CTCCAACTCACCAGGGTTCA 59.235 55.000 0.00 0.00 0.00 3.18
132 133 1.056660 TCTCCAACTCACCAGGGTTC 58.943 55.000 0.00 0.00 0.00 3.62
133 134 1.747444 ATCTCCAACTCACCAGGGTT 58.253 50.000 0.00 0.00 0.00 4.11
134 135 2.188817 GTATCTCCAACTCACCAGGGT 58.811 52.381 0.00 0.00 0.00 4.34
135 136 1.486726 GGTATCTCCAACTCACCAGGG 59.513 57.143 0.00 0.00 35.97 4.45
136 137 2.187958 TGGTATCTCCAACTCACCAGG 58.812 52.381 0.00 0.00 44.12 4.45
146 147 1.078823 AGGTGGACAGTGGTATCTCCA 59.921 52.381 0.00 0.00 45.01 3.86
147 148 1.867363 AGGTGGACAGTGGTATCTCC 58.133 55.000 0.00 0.00 0.00 3.71
148 149 3.132467 GGTTAGGTGGACAGTGGTATCTC 59.868 52.174 0.00 0.00 0.00 2.75
149 150 3.105283 GGTTAGGTGGACAGTGGTATCT 58.895 50.000 0.00 0.00 0.00 1.98
150 151 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
151 152 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
152 153 2.369532 GTTGGTTAGGTGGACAGTGGTA 59.630 50.000 0.00 0.00 0.00 3.25
153 154 1.142262 GTTGGTTAGGTGGACAGTGGT 59.858 52.381 0.00 0.00 0.00 4.16
154 155 1.420138 AGTTGGTTAGGTGGACAGTGG 59.580 52.381 0.00 0.00 0.00 4.00
155 156 2.104111 TGAGTTGGTTAGGTGGACAGTG 59.896 50.000 0.00 0.00 0.00 3.66
156 157 2.404559 TGAGTTGGTTAGGTGGACAGT 58.595 47.619 0.00 0.00 0.00 3.55
157 158 3.139077 GTTGAGTTGGTTAGGTGGACAG 58.861 50.000 0.00 0.00 0.00 3.51
158 159 2.158726 GGTTGAGTTGGTTAGGTGGACA 60.159 50.000 0.00 0.00 0.00 4.02
159 160 2.158726 TGGTTGAGTTGGTTAGGTGGAC 60.159 50.000 0.00 0.00 0.00 4.02
160 161 2.128535 TGGTTGAGTTGGTTAGGTGGA 58.871 47.619 0.00 0.00 0.00 4.02
161 162 2.227194 GTGGTTGAGTTGGTTAGGTGG 58.773 52.381 0.00 0.00 0.00 4.61
162 163 2.878406 CTGTGGTTGAGTTGGTTAGGTG 59.122 50.000 0.00 0.00 0.00 4.00
163 164 2.158667 CCTGTGGTTGAGTTGGTTAGGT 60.159 50.000 0.00 0.00 0.00 3.08
164 165 2.158667 ACCTGTGGTTGAGTTGGTTAGG 60.159 50.000 0.00 0.00 27.29 2.69
165 166 3.208747 ACCTGTGGTTGAGTTGGTTAG 57.791 47.619 0.00 0.00 27.29 2.34
166 167 3.655615 AACCTGTGGTTGAGTTGGTTA 57.344 42.857 0.71 0.00 45.07 2.85
167 168 2.525105 AACCTGTGGTTGAGTTGGTT 57.475 45.000 0.71 0.00 45.07 3.67
177 178 1.237285 GCTGCGAATCAACCTGTGGT 61.237 55.000 0.00 0.00 37.65 4.16
178 179 1.503542 GCTGCGAATCAACCTGTGG 59.496 57.895 0.00 0.00 0.00 4.17
179 180 1.236616 TGGCTGCGAATCAACCTGTG 61.237 55.000 0.00 0.00 32.14 3.66
180 181 1.073025 TGGCTGCGAATCAACCTGT 59.927 52.632 0.00 0.00 32.14 4.00
181 182 1.503542 GTGGCTGCGAATCAACCTG 59.496 57.895 0.00 0.00 32.14 4.00
182 183 1.675641 GGTGGCTGCGAATCAACCT 60.676 57.895 0.00 0.00 32.14 3.50
183 184 1.675641 AGGTGGCTGCGAATCAACC 60.676 57.895 0.00 0.00 0.00 3.77
184 185 1.503542 CAGGTGGCTGCGAATCAAC 59.496 57.895 0.00 0.00 0.00 3.18
185 186 2.334946 GCAGGTGGCTGCGAATCAA 61.335 57.895 0.00 0.00 40.72 2.57
186 187 2.747460 GCAGGTGGCTGCGAATCA 60.747 61.111 0.00 0.00 40.72 2.57
195 196 0.531200 AGTTACGAGTAGCAGGTGGC 59.469 55.000 0.00 0.00 45.30 5.01
196 197 2.098770 GGTAGTTACGAGTAGCAGGTGG 59.901 54.545 0.00 0.00 0.00 4.61
197 198 3.015327 AGGTAGTTACGAGTAGCAGGTG 58.985 50.000 0.00 0.00 32.76 4.00
198 199 3.362870 AGGTAGTTACGAGTAGCAGGT 57.637 47.619 0.00 0.00 32.76 4.00
199 200 4.715527 AAAGGTAGTTACGAGTAGCAGG 57.284 45.455 0.00 0.00 32.76 4.85
200 201 5.100943 GGAAAAGGTAGTTACGAGTAGCAG 58.899 45.833 0.00 0.00 32.76 4.24
201 202 4.768968 AGGAAAAGGTAGTTACGAGTAGCA 59.231 41.667 0.00 0.00 32.76 3.49
202 203 5.125257 AGAGGAAAAGGTAGTTACGAGTAGC 59.875 44.000 0.00 0.00 0.00 3.58
203 204 6.598850 AGAGAGGAAAAGGTAGTTACGAGTAG 59.401 42.308 0.00 0.00 0.00 2.57
204 205 6.479884 AGAGAGGAAAAGGTAGTTACGAGTA 58.520 40.000 0.00 0.00 0.00 2.59
205 206 5.323581 AGAGAGGAAAAGGTAGTTACGAGT 58.676 41.667 0.00 0.00 0.00 4.18
206 207 5.415077 TGAGAGAGGAAAAGGTAGTTACGAG 59.585 44.000 0.00 0.00 0.00 4.18
207 208 5.319453 TGAGAGAGGAAAAGGTAGTTACGA 58.681 41.667 0.00 0.00 0.00 3.43
208 209 5.415077 TCTGAGAGAGGAAAAGGTAGTTACG 59.585 44.000 0.00 0.00 0.00 3.18
209 210 6.837471 TCTGAGAGAGGAAAAGGTAGTTAC 57.163 41.667 0.00 0.00 0.00 2.50
210 211 9.543231 TTATTCTGAGAGAGGAAAAGGTAGTTA 57.457 33.333 0.00 0.00 0.00 2.24
211 212 6.943899 ATTCTGAGAGAGGAAAAGGTAGTT 57.056 37.500 0.00 0.00 0.00 2.24
212 213 8.616799 ATTATTCTGAGAGAGGAAAAGGTAGT 57.383 34.615 0.00 0.00 0.00 2.73
213 214 9.898152 AAATTATTCTGAGAGAGGAAAAGGTAG 57.102 33.333 0.00 0.00 0.00 3.18
244 245 1.571919 CGCTAGTGGAGTGGCAATAC 58.428 55.000 0.00 0.00 31.50 1.89
247 248 2.047274 GCGCTAGTGGAGTGGCAA 60.047 61.111 0.00 0.00 36.08 4.52
256 257 0.807667 GTGACAGATGGGCGCTAGTG 60.808 60.000 7.64 0.00 0.00 2.74
258 259 1.227380 GGTGACAGATGGGCGCTAG 60.227 63.158 7.64 0.00 0.00 3.42
262 263 3.309436 TTCCGGTGACAGATGGGCG 62.309 63.158 0.00 0.00 0.00 6.13
287 288 6.542005 CCCTTTTCCAACAGTTTAAAATGCTT 59.458 34.615 15.16 6.61 0.00 3.91
289 290 5.277779 GCCCTTTTCCAACAGTTTAAAATGC 60.278 40.000 15.16 6.63 0.00 3.56
299 300 2.029020 GCCTTTAGCCCTTTTCCAACAG 60.029 50.000 0.00 0.00 34.35 3.16
300 301 1.967779 GCCTTTAGCCCTTTTCCAACA 59.032 47.619 0.00 0.00 34.35 3.33
322 323 1.148236 TGGGGAAAACTAAAGTGGGGG 59.852 52.381 0.00 0.00 0.00 5.40
323 324 2.244695 GTGGGGAAAACTAAAGTGGGG 58.755 52.381 0.00 0.00 0.00 4.96
332 333 3.074836 TCCTTTATTCGGTGGGGAAAACT 59.925 43.478 0.00 0.00 0.00 2.66
334 335 3.810721 TCCTTTATTCGGTGGGGAAAA 57.189 42.857 0.00 0.00 0.00 2.29
339 340 6.320164 TGTTTATTCATCCTTTATTCGGTGGG 59.680 38.462 0.00 0.00 0.00 4.61
369 370 4.942761 TTGAGAGAAAGGCATTGCTTTT 57.057 36.364 17.47 17.47 40.40 2.27
401 402 1.426621 CGCGCTGTGCTGAATGAAT 59.573 52.632 11.82 0.00 43.27 2.57
402 403 2.862436 CGCGCTGTGCTGAATGAA 59.138 55.556 11.82 0.00 43.27 2.57
404 405 4.092652 TGCGCGCTGTGCTGAATG 62.093 61.111 33.29 0.00 43.27 2.67
405 406 4.093952 GTGCGCGCTGTGCTGAAT 62.094 61.111 33.29 0.00 43.27 2.57
411 412 1.911293 AAATACAGGTGCGCGCTGTG 61.911 55.000 33.29 26.22 31.71 3.66
412 413 0.390603 TAAATACAGGTGCGCGCTGT 60.391 50.000 33.29 28.50 33.15 4.40
417 418 4.616181 AAACAGATAAATACAGGTGCGC 57.384 40.909 0.00 0.00 0.00 6.09
444 445 0.109272 ACGTACACAGGTCGATGCAG 60.109 55.000 0.00 0.00 0.00 4.41
451 452 7.543172 TCAAACAGATAAATACGTACACAGGTC 59.457 37.037 0.00 0.00 0.00 3.85
453 454 7.821595 TCAAACAGATAAATACGTACACAGG 57.178 36.000 0.00 0.00 0.00 4.00
456 457 9.350357 TCTCTTCAAACAGATAAATACGTACAC 57.650 33.333 0.00 0.00 0.00 2.90
457 458 9.917129 TTCTCTTCAAACAGATAAATACGTACA 57.083 29.630 0.00 0.00 0.00 2.90
459 460 9.362539 GGTTCTCTTCAAACAGATAAATACGTA 57.637 33.333 0.00 0.00 0.00 3.57
460 461 7.333672 GGGTTCTCTTCAAACAGATAAATACGT 59.666 37.037 0.00 0.00 0.00 3.57
461 462 7.464178 CGGGTTCTCTTCAAACAGATAAATACG 60.464 40.741 0.00 0.00 0.00 3.06
478 479 1.254954 AAAGCTCGTACGGGTTCTCT 58.745 50.000 17.95 1.65 0.00 3.10
482 483 0.598065 ACGTAAAGCTCGTACGGGTT 59.402 50.000 25.18 8.10 46.70 4.11
488 489 2.993220 TCTCGTGTACGTAAAGCTCGTA 59.007 45.455 0.00 2.31 41.72 3.43
489 490 1.800586 TCTCGTGTACGTAAAGCTCGT 59.199 47.619 0.00 4.27 43.86 4.18
490 491 2.515641 TCTCGTGTACGTAAAGCTCG 57.484 50.000 0.00 0.00 40.80 5.03
491 492 2.913590 GGTTCTCGTGTACGTAAAGCTC 59.086 50.000 0.00 0.00 40.80 4.09
508 509 1.669265 GGCCATACGTAAAGCTGGTTC 59.331 52.381 16.79 6.46 0.00 3.62
509 510 1.680860 GGGCCATACGTAAAGCTGGTT 60.681 52.381 16.79 0.00 0.00 3.67
510 511 0.107361 GGGCCATACGTAAAGCTGGT 60.107 55.000 16.79 0.00 0.00 4.00
511 512 1.157870 CGGGCCATACGTAAAGCTGG 61.158 60.000 16.79 12.88 0.00 4.85
591 592 1.094650 TGCTTGCACGCTTCAGTTCA 61.095 50.000 16.80 0.00 0.00 3.18
592 593 0.239347 ATGCTTGCACGCTTCAGTTC 59.761 50.000 16.80 0.00 0.00 3.01
593 594 1.522668 TATGCTTGCACGCTTCAGTT 58.477 45.000 16.80 0.00 0.00 3.16
594 595 1.522668 TTATGCTTGCACGCTTCAGT 58.477 45.000 16.80 0.50 0.00 3.41
595 596 2.245096 GTTTATGCTTGCACGCTTCAG 58.755 47.619 16.80 0.00 0.00 3.02
624 625 2.413239 CGTACGTACTGTGGTGTACTGG 60.413 54.545 22.55 0.00 40.25 4.00
634 635 2.093310 CAGTCGTGATCGTACGTACTGT 59.907 50.000 22.55 11.31 44.06 3.55
635 636 2.690735 CAGTCGTGATCGTACGTACTG 58.309 52.381 22.55 15.80 44.06 2.74
636 637 1.061711 GCAGTCGTGATCGTACGTACT 59.938 52.381 22.55 5.64 44.06 2.73
637 638 1.450717 GCAGTCGTGATCGTACGTAC 58.549 55.000 15.90 15.90 44.06 3.67
638 639 0.025384 CGCAGTCGTGATCGTACGTA 59.975 55.000 16.05 2.34 44.06 3.57
639 640 1.225936 CGCAGTCGTGATCGTACGT 60.226 57.895 16.05 2.33 44.06 3.57
640 641 3.573452 CGCAGTCGTGATCGTACG 58.427 61.111 9.53 9.53 44.98 3.67
654 655 1.336056 TGTTGTACTGCATCGTACGCA 60.336 47.619 11.24 1.66 42.00 5.24
655 656 1.320555 CTGTTGTACTGCATCGTACGC 59.679 52.381 11.24 0.00 42.00 4.42
664 665 2.863153 CTGCGCCTGTTGTACTGC 59.137 61.111 4.18 0.00 0.00 4.40
678 679 4.645921 GTGCACCAAACGGGCTGC 62.646 66.667 5.22 0.00 42.05 5.25
679 680 4.326766 CGTGCACCAAACGGGCTG 62.327 66.667 12.15 0.00 42.05 4.85
680 681 2.944409 TTACGTGCACCAAACGGGCT 62.944 55.000 12.15 0.00 45.20 5.19
681 682 2.544698 TTACGTGCACCAAACGGGC 61.545 57.895 12.15 0.00 45.20 6.13
682 683 1.280444 GTTACGTGCACCAAACGGG 59.720 57.895 12.15 0.00 45.20 5.28
688 689 1.968704 TCCATTTGTTACGTGCACCA 58.031 45.000 12.15 0.00 0.00 4.17
700 701 5.047164 TCACATTTCCCTTGTGATCCATTTG 60.047 40.000 2.56 0.00 46.31 2.32
713 714 2.290577 GGCTTGACTCTCACATTTCCCT 60.291 50.000 0.00 0.00 0.00 4.20
726 727 4.335647 CCCTGCGGTGGCTTGACT 62.336 66.667 0.00 0.00 40.82 3.41
796 802 0.526211 GAGAAAATGGGACGGGTTGC 59.474 55.000 0.00 0.00 0.00 4.17
892 906 2.681778 AGGAGGCGGAGAGTGTGG 60.682 66.667 0.00 0.00 0.00 4.17
903 917 2.039624 TGTGGAGGAGGAGGAGGC 59.960 66.667 0.00 0.00 0.00 4.70
918 932 2.252072 ATTATCGGTGGCTGCGGTGT 62.252 55.000 0.00 0.00 0.00 4.16
923 937 2.484264 GGTTATGATTATCGGTGGCTGC 59.516 50.000 0.00 0.00 0.00 5.25
925 939 2.870435 GCGGTTATGATTATCGGTGGCT 60.870 50.000 0.00 0.00 0.00 4.75
926 940 1.463444 GCGGTTATGATTATCGGTGGC 59.537 52.381 0.00 0.00 0.00 5.01
927 941 2.073816 GGCGGTTATGATTATCGGTGG 58.926 52.381 0.00 0.00 0.00 4.61
928 942 2.993899 GAGGCGGTTATGATTATCGGTG 59.006 50.000 0.00 0.00 0.00 4.94
929 943 2.028385 GGAGGCGGTTATGATTATCGGT 60.028 50.000 0.00 0.00 0.00 4.69
930 944 2.233922 AGGAGGCGGTTATGATTATCGG 59.766 50.000 0.00 0.00 0.00 4.18
931 945 3.512680 GAGGAGGCGGTTATGATTATCG 58.487 50.000 0.00 0.00 0.00 2.92
932 946 3.515901 AGGAGGAGGCGGTTATGATTATC 59.484 47.826 0.00 0.00 0.00 1.75
933 947 3.515901 GAGGAGGAGGCGGTTATGATTAT 59.484 47.826 0.00 0.00 0.00 1.28
934 948 2.897969 GAGGAGGAGGCGGTTATGATTA 59.102 50.000 0.00 0.00 0.00 1.75
935 949 1.694696 GAGGAGGAGGCGGTTATGATT 59.305 52.381 0.00 0.00 0.00 2.57
987 1005 3.585990 GCCATGGGCGTCGGATTG 61.586 66.667 15.13 0.00 39.62 2.67
1005 1023 4.154347 CGGAGGAGCCTCAGGTGC 62.154 72.222 17.68 0.00 44.40 5.01
1286 1331 4.821589 CGAGCAGGAACCTCGGCC 62.822 72.222 0.00 0.00 46.15 6.13
1387 1438 0.319211 AAACCAGACGCGTGAATCGA 60.319 50.000 20.70 0.00 42.86 3.59
1392 1443 3.033764 GCGAAACCAGACGCGTGA 61.034 61.111 20.70 0.00 44.91 4.35
1537 1591 1.012234 GGCGTGCGATCAAACGATC 60.012 57.895 18.44 7.86 42.32 3.69
1549 1603 1.578206 GAAAAGTGGAGGAGGCGTGC 61.578 60.000 0.00 0.00 0.00 5.34
1557 1611 4.899502 TGCTAGAAGAAGAAAAGTGGAGG 58.100 43.478 0.00 0.00 0.00 4.30
1561 1615 6.848296 CGTTCTTTGCTAGAAGAAGAAAAGTG 59.152 38.462 13.67 5.17 43.99 3.16
1601 1655 0.179119 GCAAGCACCGTACCTATCGT 60.179 55.000 0.00 0.00 0.00 3.73
1667 1721 5.278266 CGTGTCAACAGGTTTGGATATTTGT 60.278 40.000 0.00 0.00 0.00 2.83
1750 2489 3.479489 TCTGAAAGCATGACAGAAAGCA 58.521 40.909 0.00 0.00 37.66 3.91
1764 2503 6.864685 TGCTTATTTGCTGTTTGATCTGAAAG 59.135 34.615 0.00 0.00 0.00 2.62
1898 2643 1.447314 GAACACCCTTCGGCGGTAG 60.447 63.158 7.21 4.92 30.42 3.18
1988 2733 3.440173 AGGATCAAATTACACGCAACCAG 59.560 43.478 0.00 0.00 0.00 4.00
2050 2795 7.113658 CAGACGCGAAATACTCAAAAATCTAG 58.886 38.462 15.93 0.00 0.00 2.43
2152 2897 2.127345 CGCACGACGTTCGACTCT 60.127 61.111 14.87 0.00 43.74 3.24
2242 2987 1.140052 AGACCATCGGTGTTTGTGTCA 59.860 47.619 5.08 0.00 35.25 3.58
2288 3033 1.017177 TCAAACGGGGAGAAATCGCG 61.017 55.000 0.00 0.00 44.37 5.87
2290 3035 1.463444 GTGTCAAACGGGGAGAAATCG 59.537 52.381 0.00 0.00 0.00 3.34
2326 3071 2.808543 CCAACAAAGCTGACTACAGTCC 59.191 50.000 6.91 0.00 45.04 3.85
2334 3079 1.388547 TCACCACCAACAAAGCTGAC 58.611 50.000 0.00 0.00 0.00 3.51
2347 3095 4.244862 CCACCAAAAGCATAAATCACCAC 58.755 43.478 0.00 0.00 0.00 4.16
2388 3137 7.446931 TCAGGAATGCTGAGTAATGTAACAAAA 59.553 33.333 0.00 0.00 0.00 2.44
2445 3194 0.608308 ACCCACTGAGATCGACGTCA 60.608 55.000 17.16 3.13 0.00 4.35
2921 5046 7.503521 TTGCCAAAATTTTTCATTACCCTTC 57.496 32.000 0.00 0.00 0.00 3.46
2934 5059 5.011023 ACCGAGAAGAAGATTGCCAAAATTT 59.989 36.000 0.00 0.00 0.00 1.82
3221 5347 7.394359 TCCACAAAAGGAATATGGAAGAAGAAG 59.606 37.037 0.00 0.00 36.51 2.85
3222 5348 7.176690 GTCCACAAAAGGAATATGGAAGAAGAA 59.823 37.037 0.00 0.00 41.05 2.52
3223 5349 6.659242 GTCCACAAAAGGAATATGGAAGAAGA 59.341 38.462 0.00 0.00 41.05 2.87
3261 5387 2.657143 TGCATGCATTAATGAGAGGCA 58.343 42.857 18.46 18.69 39.03 4.75
3311 5437 1.397945 CGTTTTGCGCGTTCAGTACAT 60.398 47.619 8.43 0.00 0.00 2.29
3411 5611 6.078479 TGCAAACGTAAAACATTATGTACCG 58.922 36.000 0.00 1.71 0.00 4.02
3428 5628 2.223340 GCATCCTTCCAGTATGCAAACG 60.223 50.000 0.00 0.00 44.27 3.60
3429 5629 3.427161 GCATCCTTCCAGTATGCAAAC 57.573 47.619 0.00 0.00 44.27 2.93
3468 5668 6.957920 TCAGATGAAACATTCACTTTCCAA 57.042 33.333 0.00 0.00 43.48 3.53
3625 5833 7.794683 AGAGGGAGTTTGGGAGATATACAAATA 59.205 37.037 0.00 0.00 36.60 1.40
3837 6045 1.398390 GTAATGCGCAAGTCCTTGAGG 59.602 52.381 17.11 3.18 42.93 3.86
3844 6052 2.159517 CCTCAAAGGTAATGCGCAAGTC 60.160 50.000 17.11 7.40 41.68 3.01
3884 6092 7.241376 AGAAAATAATTACGCAGAAAAGACCG 58.759 34.615 0.00 0.00 0.00 4.79
3928 6136 7.751646 TGAACTCCTAAAGTCCCAGAAAATAA 58.248 34.615 0.00 0.00 37.17 1.40
3963 6171 5.773239 TTCCAATCTTCGACGTAAATCAC 57.227 39.130 0.00 0.00 0.00 3.06
4109 6317 7.868906 AGGACAGCTAGAAGTTTAGTAGTAG 57.131 40.000 0.00 0.00 0.00 2.57
4115 6323 4.938226 CCCAAAGGACAGCTAGAAGTTTAG 59.062 45.833 0.00 0.00 33.47 1.85
4136 6408 3.004752 AGGTACATGATTGAACAGCCC 57.995 47.619 0.00 0.00 0.00 5.19
4174 6446 9.783081 AAGGCATGAAATCAGTAAAAGAAAATT 57.217 25.926 0.00 0.00 0.00 1.82
4175 6447 9.783081 AAAGGCATGAAATCAGTAAAAGAAAAT 57.217 25.926 0.00 0.00 0.00 1.82
4176 6448 9.612066 AAAAGGCATGAAATCAGTAAAAGAAAA 57.388 25.926 0.00 0.00 0.00 2.29
4180 6452 7.330208 CCAGAAAAGGCATGAAATCAGTAAAAG 59.670 37.037 0.00 0.00 0.00 2.27
4210 6482 4.182693 TCAACACCACAGACCTATAACG 57.817 45.455 0.00 0.00 0.00 3.18
4547 6819 4.743151 TGAGCAGTAACAAGTAACAGAACG 59.257 41.667 0.00 0.00 0.00 3.95
4555 6827 3.258372 CCACTCCTGAGCAGTAACAAGTA 59.742 47.826 0.00 0.00 0.00 2.24
4561 6833 1.902508 CTTCCCACTCCTGAGCAGTAA 59.097 52.381 0.00 0.00 0.00 2.24
4562 6834 1.077169 TCTTCCCACTCCTGAGCAGTA 59.923 52.381 0.00 0.00 0.00 2.74
4563 6835 0.178921 TCTTCCCACTCCTGAGCAGT 60.179 55.000 0.00 0.00 0.00 4.40
4564 6836 0.536260 CTCTTCCCACTCCTGAGCAG 59.464 60.000 0.00 0.00 0.00 4.24
4580 6852 7.849804 ACACGATATTTACAGCAAAATCTCT 57.150 32.000 0.00 0.00 31.63 3.10
4644 6916 4.018324 TCACCCATGTACTGAGAGACTACT 60.018 45.833 0.00 0.00 0.00 2.57
4645 6917 4.270834 TCACCCATGTACTGAGAGACTAC 58.729 47.826 0.00 0.00 0.00 2.73
4662 6934 4.102524 TGATACAATACATCACCCTCACCC 59.897 45.833 0.00 0.00 0.00 4.61
4726 6998 7.692908 ATAAATCAATAAAAATGGAACGGCG 57.307 32.000 4.80 4.80 0.00 6.46
4900 7175 1.366319 AGGAGAAATGCCACCTCAGT 58.634 50.000 0.00 0.00 0.00 3.41
4924 7199 8.812437 GGGTACTCCAGCATCCTTTAAAGGAG 62.812 50.000 34.12 26.70 46.15 3.69
4925 7200 7.102076 GGGTACTCCAGCATCCTTTAAAGGA 62.102 48.000 33.59 33.59 46.60 3.36
4926 7201 4.927762 GGGTACTCCAGCATCCTTTAAAGG 60.928 50.000 25.83 25.83 40.59 3.11
4927 7202 4.200092 GGGTACTCCAGCATCCTTTAAAG 58.800 47.826 8.32 8.32 35.00 1.85
4928 7203 3.370103 CGGGTACTCCAGCATCCTTTAAA 60.370 47.826 0.00 0.00 34.36 1.52
4929 7204 2.169769 CGGGTACTCCAGCATCCTTTAA 59.830 50.000 0.00 0.00 34.36 1.52
4930 7205 1.760613 CGGGTACTCCAGCATCCTTTA 59.239 52.381 0.00 0.00 34.36 1.85
4931 7206 0.541863 CGGGTACTCCAGCATCCTTT 59.458 55.000 0.00 0.00 34.36 3.11
4967 7242 2.584391 GGAGCGTGTTGGAGGAGGT 61.584 63.158 0.00 0.00 0.00 3.85
4970 7245 2.915659 ACGGAGCGTGTTGGAGGA 60.916 61.111 0.00 0.00 39.18 3.71
4990 7265 1.144969 GACGATGCAAAGACCGAACA 58.855 50.000 0.00 0.00 0.00 3.18
4994 7269 1.325640 CATCAGACGATGCAAAGACCG 59.674 52.381 0.00 0.00 42.54 4.79
4997 7272 2.497273 TCTCCATCAGACGATGCAAAGA 59.503 45.455 0.00 0.00 46.59 2.52
5026 7301 0.883833 GCCACCAACACAATGAGGAG 59.116 55.000 0.00 0.00 0.00 3.69
5092 7367 8.909708 TTCAATAGATGCCAAAAGAAAATACG 57.090 30.769 0.00 0.00 0.00 3.06
5137 7412 5.795972 TCACAAATTCATCACCAATGCAAT 58.204 33.333 0.00 0.00 35.17 3.56
5163 7446 1.381522 TTCCATGTGCGTCCATCATG 58.618 50.000 0.00 0.00 38.72 3.07
5172 7455 5.217393 CCTCATATTCAAATTCCATGTGCG 58.783 41.667 0.00 0.00 0.00 5.34
5174 7457 5.599656 ACCCCTCATATTCAAATTCCATGTG 59.400 40.000 0.00 0.00 0.00 3.21
5175 7458 5.599656 CACCCCTCATATTCAAATTCCATGT 59.400 40.000 0.00 0.00 0.00 3.21
5179 7462 4.342092 CCACACCCCTCATATTCAAATTCC 59.658 45.833 0.00 0.00 0.00 3.01
5192 7475 0.537371 CTTGGACAACCACACCCCTC 60.537 60.000 0.00 0.00 46.80 4.30
5194 7477 0.537371 CTCTTGGACAACCACACCCC 60.537 60.000 0.00 0.00 46.80 4.95
5211 7494 0.250513 ACGGCTCCTCATTTGTCCTC 59.749 55.000 0.00 0.00 0.00 3.71
5226 7509 0.509929 GTCGGACAACACTAAACGGC 59.490 55.000 2.62 0.00 0.00 5.68
5254 7542 1.396607 AAACCCACCCTTCCAAACGC 61.397 55.000 0.00 0.00 0.00 4.84
5270 7558 3.013921 TCTACAATCGGATTGGGCAAAC 58.986 45.455 28.73 0.00 44.42 2.93
5312 7600 9.388506 CCAGAGATCTGTTAAACATAAGTGATT 57.611 33.333 0.00 0.00 42.27 2.57
5313 7601 8.543774 ACCAGAGATCTGTTAAACATAAGTGAT 58.456 33.333 0.00 0.00 42.27 3.06
5314 7602 7.907389 ACCAGAGATCTGTTAAACATAAGTGA 58.093 34.615 0.00 0.00 42.27 3.41
5315 7603 9.307121 CTACCAGAGATCTGTTAAACATAAGTG 57.693 37.037 0.00 0.00 42.27 3.16
5316 7604 9.256228 TCTACCAGAGATCTGTTAAACATAAGT 57.744 33.333 0.00 0.00 42.27 2.24
5320 7608 9.388506 CATTTCTACCAGAGATCTGTTAAACAT 57.611 33.333 0.00 0.00 42.27 2.71
5321 7609 8.375506 ACATTTCTACCAGAGATCTGTTAAACA 58.624 33.333 0.00 0.00 42.27 2.83
5322 7610 8.779354 ACATTTCTACCAGAGATCTGTTAAAC 57.221 34.615 0.00 0.00 42.27 2.01
5325 7613 9.201989 ACATACATTTCTACCAGAGATCTGTTA 57.798 33.333 0.00 0.00 42.27 2.41
5326 7614 8.083828 ACATACATTTCTACCAGAGATCTGTT 57.916 34.615 0.00 0.00 42.27 3.16
5327 7615 7.667575 ACATACATTTCTACCAGAGATCTGT 57.332 36.000 0.00 0.00 42.27 3.41
5328 7616 8.954950 AAACATACATTTCTACCAGAGATCTG 57.045 34.615 0.00 2.72 43.40 2.90
5329 7617 8.207545 GGAAACATACATTTCTACCAGAGATCT 58.792 37.037 0.00 0.00 38.43 2.75
5330 7618 7.987458 TGGAAACATACATTTCTACCAGAGATC 59.013 37.037 0.00 0.00 38.43 2.75
5331 7619 7.861629 TGGAAACATACATTTCTACCAGAGAT 58.138 34.615 0.00 0.00 38.43 2.75
5332 7620 7.252612 TGGAAACATACATTTCTACCAGAGA 57.747 36.000 0.00 0.00 38.43 3.10
5333 7621 7.921786 TTGGAAACATACATTTCTACCAGAG 57.078 36.000 0.00 0.00 42.32 3.35
5334 7622 8.698973 TTTTGGAAACATACATTTCTACCAGA 57.301 30.769 0.00 0.00 42.32 3.86
5335 7623 9.357652 CATTTTGGAAACATACATTTCTACCAG 57.642 33.333 0.00 0.00 42.32 4.00
5336 7624 8.865090 ACATTTTGGAAACATACATTTCTACCA 58.135 29.630 0.00 0.00 42.32 3.25
5340 7628 9.308000 TCCTACATTTTGGAAACATACATTTCT 57.692 29.630 0.00 0.00 42.32 2.52
5341 7629 9.573133 CTCCTACATTTTGGAAACATACATTTC 57.427 33.333 0.00 0.00 42.32 2.17
5342 7630 9.308000 TCTCCTACATTTTGGAAACATACATTT 57.692 29.630 0.00 0.00 42.32 2.32
5343 7631 8.877864 TCTCCTACATTTTGGAAACATACATT 57.122 30.769 0.00 0.00 42.32 2.71
5344 7632 8.109634 ACTCTCCTACATTTTGGAAACATACAT 58.890 33.333 0.00 0.00 42.32 2.29
5345 7633 7.458397 ACTCTCCTACATTTTGGAAACATACA 58.542 34.615 0.00 0.00 42.32 2.29
5346 7634 7.923414 ACTCTCCTACATTTTGGAAACATAC 57.077 36.000 0.00 0.00 42.32 2.39
5347 7635 8.934023 AAACTCTCCTACATTTTGGAAACATA 57.066 30.769 0.00 0.00 42.32 2.29
5348 7636 7.505585 TGAAACTCTCCTACATTTTGGAAACAT 59.494 33.333 0.00 0.00 42.32 2.71
5349 7637 6.831353 TGAAACTCTCCTACATTTTGGAAACA 59.169 34.615 0.00 0.00 39.83 2.83
5350 7638 7.139392 GTGAAACTCTCCTACATTTTGGAAAC 58.861 38.462 0.00 0.00 31.23 2.78
5351 7639 7.272037 GTGAAACTCTCCTACATTTTGGAAA 57.728 36.000 0.00 0.00 31.23 3.13
5352 7640 6.877611 GTGAAACTCTCCTACATTTTGGAA 57.122 37.500 0.00 0.00 31.23 3.53
5369 7657 9.783256 GGGATGTTTGTATATTGTTAGTGAAAC 57.217 33.333 0.00 0.00 38.67 2.78
5370 7658 8.670135 CGGGATGTTTGTATATTGTTAGTGAAA 58.330 33.333 0.00 0.00 0.00 2.69
5371 7659 7.825270 ACGGGATGTTTGTATATTGTTAGTGAA 59.175 33.333 0.00 0.00 0.00 3.18
5372 7660 7.279090 CACGGGATGTTTGTATATTGTTAGTGA 59.721 37.037 0.00 0.00 0.00 3.41
5373 7661 7.406553 CACGGGATGTTTGTATATTGTTAGTG 58.593 38.462 0.00 0.00 0.00 2.74
5374 7662 6.540914 CCACGGGATGTTTGTATATTGTTAGT 59.459 38.462 0.00 0.00 0.00 2.24
5375 7663 6.540914 ACCACGGGATGTTTGTATATTGTTAG 59.459 38.462 0.00 0.00 0.00 2.34
5376 7664 6.416415 ACCACGGGATGTTTGTATATTGTTA 58.584 36.000 0.00 0.00 0.00 2.41
5377 7665 5.258051 ACCACGGGATGTTTGTATATTGTT 58.742 37.500 0.00 0.00 0.00 2.83
5378 7666 4.850680 ACCACGGGATGTTTGTATATTGT 58.149 39.130 0.00 0.00 0.00 2.71
5379 7667 6.764085 TCTTACCACGGGATGTTTGTATATTG 59.236 38.462 0.00 0.00 0.00 1.90
5380 7668 6.891388 TCTTACCACGGGATGTTTGTATATT 58.109 36.000 0.00 0.00 0.00 1.28
5381 7669 6.488769 TCTTACCACGGGATGTTTGTATAT 57.511 37.500 0.00 0.00 0.00 0.86
5382 7670 5.936187 TCTTACCACGGGATGTTTGTATA 57.064 39.130 0.00 0.00 0.00 1.47
5383 7671 4.829872 TCTTACCACGGGATGTTTGTAT 57.170 40.909 0.00 0.00 0.00 2.29
5384 7672 4.620589 TTCTTACCACGGGATGTTTGTA 57.379 40.909 0.00 0.00 0.00 2.41
5385 7673 3.495434 TTCTTACCACGGGATGTTTGT 57.505 42.857 0.00 0.00 0.00 2.83
5386 7674 5.385509 AAATTCTTACCACGGGATGTTTG 57.614 39.130 0.00 0.00 0.00 2.93
5387 7675 6.041069 TCAAAAATTCTTACCACGGGATGTTT 59.959 34.615 0.00 0.00 0.00 2.83
5388 7676 5.536916 TCAAAAATTCTTACCACGGGATGTT 59.463 36.000 0.00 0.00 0.00 2.71
5389 7677 5.074115 TCAAAAATTCTTACCACGGGATGT 58.926 37.500 0.00 0.00 0.00 3.06
5390 7678 5.637006 TCAAAAATTCTTACCACGGGATG 57.363 39.130 0.00 0.00 0.00 3.51
5391 7679 8.533569 AATATCAAAAATTCTTACCACGGGAT 57.466 30.769 0.00 0.00 0.00 3.85
5392 7680 7.948034 AATATCAAAAATTCTTACCACGGGA 57.052 32.000 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.