Multiple sequence alignment - TraesCS2A01G356600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G356600 chr2A 100.000 6587 0 0 1 6587 601343899 601337313 0.000000e+00 12165.0
1 TraesCS2A01G356600 chr2A 94.168 2332 83 14 2913 5197 722382888 722380563 0.000000e+00 3504.0
2 TraesCS2A01G356600 chr2A 93.948 2330 86 13 2913 5197 722429707 722427388 0.000000e+00 3470.0
3 TraesCS2A01G356600 chr2A 97.059 1122 28 4 1271 2391 191902441 191903558 0.000000e+00 1884.0
4 TraesCS2A01G356600 chr2A 98.319 357 6 0 1271 1627 191901898 191902254 1.560000e-175 627.0
5 TraesCS2A01G356600 chr2A 81.690 142 25 1 5058 5198 82188725 82188584 4.170000e-22 117.0
6 TraesCS2A01G356600 chr2A 81.690 142 25 1 5058 5198 279486124 279485983 4.170000e-22 117.0
7 TraesCS2A01G356600 chr2A 90.698 86 7 1 3030 3114 726457744 726457659 5.400000e-21 113.0
8 TraesCS2A01G356600 chr7A 97.629 1729 32 8 1265 2989 217682582 217680859 0.000000e+00 2957.0
9 TraesCS2A01G356600 chr7A 97.368 342 9 0 1265 1606 217683064 217682723 3.420000e-162 582.0
10 TraesCS2A01G356600 chr7A 95.789 95 2 1 5684 5778 209592929 209593021 1.140000e-32 152.0
11 TraesCS2A01G356600 chr5B 97.970 1675 29 5 1279 2951 248655235 248653564 0.000000e+00 2900.0
12 TraesCS2A01G356600 chr5B 90.155 904 62 10 3844 4733 420190023 420189133 0.000000e+00 1151.0
13 TraesCS2A01G356600 chr5B 88.690 336 21 11 4732 5054 420189029 420188698 1.720000e-105 394.0
14 TraesCS2A01G356600 chr5B 97.590 83 1 1 5695 5777 437910249 437910330 2.480000e-29 141.0
15 TraesCS2A01G356600 chr5B 93.750 48 3 0 5151 5198 655053792 655053745 9.160000e-09 73.1
16 TraesCS2A01G356600 chr1A 98.357 1643 24 3 1270 2910 590992732 590994373 0.000000e+00 2881.0
17 TraesCS2A01G356600 chr1A 94.565 92 4 1 5688 5778 554243895 554243986 2.480000e-29 141.0
18 TraesCS2A01G356600 chr1A 96.471 85 1 1 5695 5779 495702349 495702267 8.910000e-29 139.0
19 TraesCS2A01G356600 chr1A 90.816 98 6 2 5694 5791 554300714 554300620 1.930000e-25 128.0
20 TraesCS2A01G356600 chr6A 98.180 1648 27 3 1264 2910 531546332 531547977 0.000000e+00 2874.0
21 TraesCS2A01G356600 chr6A 97.855 1445 17 5 1475 2917 592471564 592472996 0.000000e+00 2484.0
22 TraesCS2A01G356600 chr6A 82.979 141 22 2 5058 5198 55354937 55354799 6.930000e-25 126.0
23 TraesCS2A01G356600 chr6A 89.041 73 7 1 3046 3117 253940912 253940840 9.100000e-14 89.8
24 TraesCS2A01G356600 chr7B 97.226 1694 28 10 1271 2962 606357000 606358676 0.000000e+00 2850.0
25 TraesCS2A01G356600 chr7B 86.702 376 39 6 1 372 62618726 62619094 2.210000e-109 407.0
26 TraesCS2A01G356600 chr7B 86.580 231 21 7 125 349 594981044 594981270 5.100000e-61 246.0
27 TraesCS2A01G356600 chr5A 96.211 1610 37 8 1431 3020 523746688 523748293 0.000000e+00 2614.0
28 TraesCS2A01G356600 chr5A 90.132 152 14 1 2868 3019 119033384 119033534 5.210000e-46 196.0
29 TraesCS2A01G356600 chr6B 97.449 1411 23 10 1562 2968 430554891 430553490 0.000000e+00 2394.0
30 TraesCS2A01G356600 chr7D 92.192 1665 94 18 3089 4735 530082196 530080550 0.000000e+00 2322.0
31 TraesCS2A01G356600 chr7D 90.407 344 12 5 4732 5057 530080447 530080107 3.650000e-117 433.0
32 TraesCS2A01G356600 chr7D 84.241 349 31 7 1 347 534724731 534725057 1.070000e-82 318.0
33 TraesCS2A01G356600 chr7D 96.703 91 1 1 5688 5778 199564227 199564315 4.110000e-32 150.0
34 TraesCS2A01G356600 chr7D 89.320 103 9 2 5058 5159 530079824 530079723 1.930000e-25 128.0
35 TraesCS2A01G356600 chr2D 92.085 1655 95 19 3089 4725 166157730 166159366 0.000000e+00 2298.0
36 TraesCS2A01G356600 chr2D 88.677 786 31 15 5839 6587 457654212 457653448 0.000000e+00 905.0
37 TraesCS2A01G356600 chr2D 91.228 627 36 10 5215 5837 457655001 457654390 0.000000e+00 835.0
38 TraesCS2A01G356600 chr2D 90.698 344 11 5 4732 5057 166159475 166159815 7.840000e-119 438.0
39 TraesCS2A01G356600 chr2D 83.163 392 43 13 890 1273 457655376 457655000 2.940000e-88 337.0
40 TraesCS2A01G356600 chr2D 92.405 158 10 1 371 528 457655756 457655601 2.390000e-54 224.0
41 TraesCS2A01G356600 chr2D 88.514 148 15 2 2872 3019 648676126 648676271 1.890000e-40 178.0
42 TraesCS2A01G356600 chr2D 97.619 84 1 1 5695 5778 423859910 423859828 6.890000e-30 143.0
43 TraesCS2A01G356600 chr2D 97.619 84 0 2 5695 5777 469977669 469977587 6.890000e-30 143.0
44 TraesCS2A01G356600 chr2D 87.692 130 5 4 677 806 457655519 457655401 2.480000e-29 141.0
45 TraesCS2A01G356600 chr2D 94.444 90 5 0 5690 5779 36361554 36361643 8.910000e-29 139.0
46 TraesCS2A01G356600 chr2D 90.291 103 9 1 5058 5159 166160097 166160199 4.140000e-27 134.0
47 TraesCS2A01G356600 chr2D 92.424 66 5 0 581 646 457655585 457655520 1.960000e-15 95.3
48 TraesCS2A01G356600 chr3B 95.410 1416 24 12 1548 2951 666695309 666693923 0.000000e+00 2217.0
49 TraesCS2A01G356600 chr3B 97.527 283 7 0 1271 1553 666704196 666703914 9.930000e-133 484.0
50 TraesCS2A01G356600 chr3B 95.699 93 2 2 5687 5778 822106286 822106195 1.480000e-31 148.0
51 TraesCS2A01G356600 chr3B 94.737 95 3 2 5687 5780 805612354 805612447 5.320000e-31 147.0
52 TraesCS2A01G356600 chr3B 94.737 95 3 2 5687 5780 805619143 805619236 5.320000e-31 147.0
53 TraesCS2A01G356600 chr2B 89.665 1432 83 25 5193 6587 538955858 538954455 0.000000e+00 1764.0
54 TraesCS2A01G356600 chr2B 91.009 912 44 19 371 1263 538956746 538955854 0.000000e+00 1195.0
55 TraesCS2A01G356600 chr2B 87.829 304 29 6 72 370 380382492 380382192 3.780000e-92 350.0
56 TraesCS2A01G356600 chr2B 82.517 143 21 4 5058 5198 782851112 782850972 8.970000e-24 122.0
57 TraesCS2A01G356600 chr4D 93.514 1110 58 7 1517 2617 153995913 153997017 0.000000e+00 1639.0
58 TraesCS2A01G356600 chr4D 86.782 348 23 6 1 345 64088686 64088359 3.750000e-97 366.0
59 TraesCS2A01G356600 chr4D 82.877 146 19 3 4066 4207 282389674 282389817 6.930000e-25 126.0
60 TraesCS2A01G356600 chr4D 89.130 92 6 3 5690 5777 443798081 443798172 1.940000e-20 111.0
61 TraesCS2A01G356600 chr3A 93.437 1097 51 3 2911 3990 737831944 737833036 0.000000e+00 1607.0
62 TraesCS2A01G356600 chr3A 92.342 1110 51 13 2911 3990 737857433 737858538 0.000000e+00 1548.0
63 TraesCS2A01G356600 chr3A 92.252 1110 52 13 2911 3990 737840625 737841730 0.000000e+00 1543.0
64 TraesCS2A01G356600 chr3A 97.105 380 10 1 4820 5198 737863370 737863749 2.000000e-179 640.0
65 TraesCS2A01G356600 chr3A 97.887 142 3 0 4685 4826 737833035 737833176 5.100000e-61 246.0
66 TraesCS2A01G356600 chr3A 97.183 142 4 0 4685 4826 737858537 737858678 2.370000e-59 241.0
67 TraesCS2A01G356600 chr3A 96.479 142 5 0 4685 4826 737841729 737841870 1.100000e-57 235.0
68 TraesCS2A01G356600 chr3A 94.681 94 5 0 5695 5788 744059854 744059761 5.320000e-31 147.0
69 TraesCS2A01G356600 chr3A 93.617 94 5 1 5695 5788 744400446 744400354 8.910000e-29 139.0
70 TraesCS2A01G356600 chr3A 79.577 142 28 1 5067 5207 662203799 662203658 4.200000e-17 100.0
71 TraesCS2A01G356600 chr4B 93.548 434 21 5 4117 4548 582764133 582763705 2.000000e-179 640.0
72 TraesCS2A01G356600 chr4B 87.613 331 34 4 3407 3735 582764456 582764131 1.730000e-100 377.0
73 TraesCS2A01G356600 chr4B 80.251 319 34 9 2918 3218 281857121 281856814 5.170000e-51 213.0
74 TraesCS2A01G356600 chr4B 97.297 37 1 0 5162 5198 456378813 456378849 5.510000e-06 63.9
75 TraesCS2A01G356600 chr4B 86.792 53 7 0 5146 5198 240140539 240140591 7.130000e-05 60.2
76 TraesCS2A01G356600 chr1B 87.410 556 40 9 3651 4198 628113202 628113735 4.370000e-171 612.0
77 TraesCS2A01G356600 chr1B 92.795 347 19 4 4204 4548 628114071 628114413 1.280000e-136 497.0
78 TraesCS2A01G356600 chr1B 88.235 374 38 4 1 371 9605001 9605371 6.060000e-120 442.0
79 TraesCS2A01G356600 chr1B 85.676 377 39 8 1 375 2020035 2019672 3.730000e-102 383.0
80 TraesCS2A01G356600 chr1B 87.789 303 20 8 4732 5019 628114672 628114972 8.180000e-89 339.0
81 TraesCS2A01G356600 chr1B 87.578 161 16 4 2874 3032 633755958 633755800 4.060000e-42 183.0
82 TraesCS2A01G356600 chr1B 91.489 47 3 1 5158 5203 130935626 130935580 5.510000e-06 63.9
83 TraesCS2A01G356600 chr5D 88.782 312 14 7 1 309 512897250 512896957 4.850000e-96 363.0
84 TraesCS2A01G356600 chr5D 87.705 122 15 0 3097 3218 22491851 22491972 6.890000e-30 143.0
85 TraesCS2A01G356600 chr5D 97.368 38 0 1 3027 3063 22491809 22491846 5.510000e-06 63.9
86 TraesCS2A01G356600 chr4A 87.773 229 22 4 125 348 718515567 718515794 5.070000e-66 263.0
87 TraesCS2A01G356600 chr4A 90.698 86 7 1 3030 3114 594265368 594265283 5.400000e-21 113.0
88 TraesCS2A01G356600 chr4A 79.861 144 24 4 5058 5198 629589104 629589245 4.200000e-17 100.0
89 TraesCS2A01G356600 chr6D 89.116 147 15 1 2874 3019 38536713 38536859 1.460000e-41 182.0
90 TraesCS2A01G356600 chr6D 82.517 143 19 3 4069 4207 350791374 350791234 3.230000e-23 121.0
91 TraesCS2A01G356600 chr3D 97.619 84 2 0 5685 5768 610081465 610081382 1.910000e-30 145.0
92 TraesCS2A01G356600 chr3D 96.512 86 3 0 5695 5780 610162619 610162534 6.890000e-30 143.0
93 TraesCS2A01G356600 chr3D 93.617 94 5 1 5695 5787 610202286 610202193 8.910000e-29 139.0
94 TraesCS2A01G356600 chr3D 93.617 94 5 1 5695 5787 610338055 610337962 8.910000e-29 139.0
95 TraesCS2A01G356600 chr3D 95.349 86 4 0 5695 5780 610089154 610089069 3.200000e-28 137.0
96 TraesCS2A01G356600 chr3D 83.221 149 22 3 5058 5203 275623704 275623852 4.140000e-27 134.0
97 TraesCS2A01G356600 chrUn 96.429 84 3 0 5695 5778 376211660 376211743 8.910000e-29 139.0
98 TraesCS2A01G356600 chrUn 95.402 87 4 0 5695 5781 421837760 421837674 8.910000e-29 139.0
99 TraesCS2A01G356600 chrUn 96.429 84 3 0 5695 5778 437863042 437863125 8.910000e-29 139.0
100 TraesCS2A01G356600 chrUn 94.382 89 1 4 5695 5779 385235869 385235781 4.140000e-27 134.0
101 TraesCS2A01G356600 chrUn 89.691 97 6 3 3030 3123 94078014 94078109 3.230000e-23 121.0
102 TraesCS2A01G356600 chrUn 93.750 48 3 0 5151 5198 284670374 284670327 9.160000e-09 73.1
103 TraesCS2A01G356600 chrUn 93.750 48 3 0 5151 5198 290416280 290416233 9.160000e-09 73.1
104 TraesCS2A01G356600 chr1D 96.429 84 2 1 5695 5778 398975514 398975432 3.200000e-28 137.0
105 TraesCS2A01G356600 chr1D 93.407 91 6 0 5688 5778 462398688 462398778 1.150000e-27 135.0
106 TraesCS2A01G356600 chr1D 95.238 84 4 0 5695 5778 462472466 462472383 4.140000e-27 134.0
107 TraesCS2A01G356600 chr1D 92.473 93 5 2 5688 5778 462467881 462467789 1.490000e-26 132.0
108 TraesCS2A01G356600 chr1D 94.595 37 2 0 5162 5198 51570831 51570867 2.570000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G356600 chr2A 601337313 601343899 6586 True 12165.000000 12165 100.000000 1 6587 1 chr2A.!!$R3 6586
1 TraesCS2A01G356600 chr2A 722380563 722382888 2325 True 3504.000000 3504 94.168000 2913 5197 1 chr2A.!!$R4 2284
2 TraesCS2A01G356600 chr2A 722427388 722429707 2319 True 3470.000000 3470 93.948000 2913 5197 1 chr2A.!!$R5 2284
3 TraesCS2A01G356600 chr2A 191901898 191903558 1660 False 1255.500000 1884 97.689000 1271 2391 2 chr2A.!!$F1 1120
4 TraesCS2A01G356600 chr7A 217680859 217683064 2205 True 1769.500000 2957 97.498500 1265 2989 2 chr7A.!!$R1 1724
5 TraesCS2A01G356600 chr5B 248653564 248655235 1671 True 2900.000000 2900 97.970000 1279 2951 1 chr5B.!!$R1 1672
6 TraesCS2A01G356600 chr5B 420188698 420190023 1325 True 772.500000 1151 89.422500 3844 5054 2 chr5B.!!$R3 1210
7 TraesCS2A01G356600 chr1A 590992732 590994373 1641 False 2881.000000 2881 98.357000 1270 2910 1 chr1A.!!$F2 1640
8 TraesCS2A01G356600 chr6A 531546332 531547977 1645 False 2874.000000 2874 98.180000 1264 2910 1 chr6A.!!$F1 1646
9 TraesCS2A01G356600 chr6A 592471564 592472996 1432 False 2484.000000 2484 97.855000 1475 2917 1 chr6A.!!$F2 1442
10 TraesCS2A01G356600 chr7B 606357000 606358676 1676 False 2850.000000 2850 97.226000 1271 2962 1 chr7B.!!$F3 1691
11 TraesCS2A01G356600 chr5A 523746688 523748293 1605 False 2614.000000 2614 96.211000 1431 3020 1 chr5A.!!$F2 1589
12 TraesCS2A01G356600 chr6B 430553490 430554891 1401 True 2394.000000 2394 97.449000 1562 2968 1 chr6B.!!$R1 1406
13 TraesCS2A01G356600 chr7D 530079723 530082196 2473 True 961.000000 2322 90.639667 3089 5159 3 chr7D.!!$R1 2070
14 TraesCS2A01G356600 chr2D 166157730 166160199 2469 False 956.666667 2298 91.024667 3089 5159 3 chr2D.!!$F3 2070
15 TraesCS2A01G356600 chr2D 457653448 457655756 2308 True 422.883333 905 89.264833 371 6587 6 chr2D.!!$R3 6216
16 TraesCS2A01G356600 chr3B 666693923 666695309 1386 True 2217.000000 2217 95.410000 1548 2951 1 chr3B.!!$R1 1403
17 TraesCS2A01G356600 chr2B 538954455 538956746 2291 True 1479.500000 1764 90.337000 371 6587 2 chr2B.!!$R3 6216
18 TraesCS2A01G356600 chr4D 153995913 153997017 1104 False 1639.000000 1639 93.514000 1517 2617 1 chr4D.!!$F1 1100
19 TraesCS2A01G356600 chr3A 737831944 737833176 1232 False 926.500000 1607 95.662000 2911 4826 2 chr3A.!!$F2 1915
20 TraesCS2A01G356600 chr3A 737857433 737858678 1245 False 894.500000 1548 94.762500 2911 4826 2 chr3A.!!$F4 1915
21 TraesCS2A01G356600 chr3A 737840625 737841870 1245 False 889.000000 1543 94.365500 2911 4826 2 chr3A.!!$F3 1915
22 TraesCS2A01G356600 chr4B 582763705 582764456 751 True 508.500000 640 90.580500 3407 4548 2 chr4B.!!$R2 1141
23 TraesCS2A01G356600 chr1B 628113202 628114972 1770 False 482.666667 612 89.331333 3651 5019 3 chr1B.!!$F2 1368

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
172 173 0.100503 TGATCGACGTGCGTGATCAT 59.899 50.000 22.71 5.42 42.50 2.45 F
276 277 0.107703 TGGACGTCGGTCTATACGGT 60.108 55.000 9.92 0.00 43.25 4.83 F
345 346 0.116143 TTCATTTTGTGGGGGAGGGG 59.884 55.000 0.00 0.00 0.00 4.79 F
759 769 0.312729 CAAGCTCTGCATGCAACACA 59.687 50.000 22.88 5.02 0.00 3.72 F
960 984 0.321653 GTTCCGCATCTGTTCAGGGT 60.322 55.000 0.00 0.00 0.00 4.34 F
1116 1141 1.064952 CCAAGTTCCGTTTCCACACAC 59.935 52.381 0.00 0.00 0.00 3.82 F
1799 2457 1.276844 GCACAATCGCGCCAGATAC 59.723 57.895 0.00 0.00 0.00 2.24 F
3578 4309 0.531532 CGCCTGCTCCTAACCTCATG 60.532 60.000 0.00 0.00 0.00 3.07 F
3970 4706 0.107703 CAAAGACAGCGCCCTCCATA 60.108 55.000 2.29 0.00 0.00 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1669 2327 0.100682 TCGAGTCCTTGCAGCGTATC 59.899 55.000 0.00 0.0 0.00 2.24 R
2177 2843 1.112916 TGGGCGAGTGAGACTTGTCA 61.113 55.000 3.49 0.0 35.94 3.58 R
2223 2889 7.496346 AGACCATGAAATCTTAGTTGGACTA 57.504 36.000 0.00 0.0 29.64 2.59 R
2617 3285 1.576920 CAAACATGCCCGTGCGTTA 59.423 52.632 0.00 0.0 41.78 3.18 R
2937 3616 2.706890 GTATTGTGACGGTGAACCCAT 58.293 47.619 0.00 0.0 0.00 4.00 R
2969 3648 8.871686 AAATTCAAACTGAAAGCGTAAAATCT 57.128 26.923 0.00 0.0 40.12 2.40 R
3692 4425 0.244721 GCAAGGGTGAGCAAACCATC 59.755 55.000 9.75 0.0 42.47 3.51 R
5318 6870 0.037590 CTTGAAATCCCCCGTCACCA 59.962 55.000 0.00 0.0 0.00 4.17 R
5948 7680 1.075601 TTCCAAGAGGAGCCCAACAT 58.924 50.000 0.00 0.0 46.74 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 4.700365 CGACAGCGCGGTCAGTCA 62.700 66.667 33.98 0.00 37.66 3.41
52 53 3.106407 GACAGCGCGGTCAGTCAC 61.106 66.667 31.48 7.41 37.73 3.67
53 54 3.841379 GACAGCGCGGTCAGTCACA 62.841 63.158 31.48 0.00 37.73 3.58
54 55 3.108289 CAGCGCGGTCAGTCACAG 61.108 66.667 8.38 0.00 0.00 3.66
58 59 4.357947 GCGGTCAGTCACAGCCGA 62.358 66.667 8.59 0.00 46.33 5.54
59 60 2.573869 CGGTCAGTCACAGCCGAT 59.426 61.111 0.00 0.00 46.33 4.18
60 61 1.807165 CGGTCAGTCACAGCCGATG 60.807 63.158 0.00 0.00 46.33 3.84
61 62 1.591703 GGTCAGTCACAGCCGATGA 59.408 57.895 0.00 0.00 0.00 2.92
62 63 0.459237 GGTCAGTCACAGCCGATGAG 60.459 60.000 0.00 0.00 0.00 2.90
63 64 1.080995 GTCAGTCACAGCCGATGAGC 61.081 60.000 0.00 0.00 0.00 4.26
64 65 1.812922 CAGTCACAGCCGATGAGCC 60.813 63.158 0.00 0.00 0.00 4.70
65 66 2.887568 GTCACAGCCGATGAGCCG 60.888 66.667 0.00 0.00 0.00 5.52
66 67 3.381983 TCACAGCCGATGAGCCGT 61.382 61.111 0.00 0.00 0.00 5.68
67 68 2.887568 CACAGCCGATGAGCCGTC 60.888 66.667 0.00 0.00 0.00 4.79
68 69 4.498520 ACAGCCGATGAGCCGTCG 62.499 66.667 9.13 9.13 41.82 5.12
73 74 3.872728 CGATGAGCCGTCGGACGA 61.873 66.667 30.33 11.98 46.05 4.20
74 75 2.278013 GATGAGCCGTCGGACGAC 60.278 66.667 30.33 20.34 46.05 4.34
75 76 3.047718 GATGAGCCGTCGGACGACA 62.048 63.158 30.33 24.17 46.05 4.35
76 77 2.537792 GATGAGCCGTCGGACGACAA 62.538 60.000 30.33 12.86 46.05 3.18
77 78 2.804090 GAGCCGTCGGACGACAAC 60.804 66.667 30.33 16.40 46.05 3.32
78 79 4.695231 AGCCGTCGGACGACAACG 62.695 66.667 30.33 14.82 46.05 4.10
89 90 1.416049 CGACAACGTTCAGATGCGG 59.584 57.895 0.00 0.00 34.56 5.69
90 91 1.132640 GACAACGTTCAGATGCGGC 59.867 57.895 0.00 0.00 0.00 6.53
91 92 2.096406 CAACGTTCAGATGCGGCG 59.904 61.111 0.51 0.51 0.00 6.46
92 93 3.118454 AACGTTCAGATGCGGCGG 61.118 61.111 9.78 0.00 0.00 6.13
107 108 4.856801 CGGCGGATGGGGTTCAGG 62.857 72.222 0.00 0.00 0.00 3.86
110 111 4.856801 CGGATGGGGTTCAGGCGG 62.857 72.222 0.00 0.00 0.00 6.13
144 145 3.853330 CGGCGATCGCACAGTTGG 61.853 66.667 38.00 15.58 44.11 3.77
145 146 2.434185 GGCGATCGCACAGTTGGA 60.434 61.111 38.00 0.00 44.11 3.53
146 147 2.032634 GGCGATCGCACAGTTGGAA 61.033 57.895 38.00 0.00 44.11 3.53
147 148 1.369091 GGCGATCGCACAGTTGGAAT 61.369 55.000 38.00 0.00 44.11 3.01
148 149 0.247814 GCGATCGCACAGTTGGAATG 60.248 55.000 33.89 0.00 41.49 2.67
149 150 0.374758 CGATCGCACAGTTGGAATGG 59.625 55.000 0.26 0.00 0.00 3.16
150 151 1.737838 GATCGCACAGTTGGAATGGA 58.262 50.000 0.00 0.00 0.00 3.41
151 152 1.398390 GATCGCACAGTTGGAATGGAC 59.602 52.381 0.00 0.00 0.00 4.02
152 153 0.948623 TCGCACAGTTGGAATGGACG 60.949 55.000 0.00 0.00 0.00 4.79
153 154 1.227999 CGCACAGTTGGAATGGACGT 61.228 55.000 0.00 0.00 0.00 4.34
154 155 0.238289 GCACAGTTGGAATGGACGTG 59.762 55.000 0.00 0.00 0.00 4.49
155 156 1.877637 CACAGTTGGAATGGACGTGA 58.122 50.000 0.00 0.00 0.00 4.35
156 157 2.426522 CACAGTTGGAATGGACGTGAT 58.573 47.619 0.00 0.00 0.00 3.06
157 158 2.416547 CACAGTTGGAATGGACGTGATC 59.583 50.000 0.00 0.00 0.00 2.92
158 159 1.660607 CAGTTGGAATGGACGTGATCG 59.339 52.381 0.00 0.00 43.34 3.69
159 160 1.548719 AGTTGGAATGGACGTGATCGA 59.451 47.619 0.00 0.00 40.62 3.59
160 161 1.659098 GTTGGAATGGACGTGATCGAC 59.341 52.381 0.00 0.00 40.62 4.20
168 169 2.501008 CGTGATCGACGTGCGTGA 60.501 61.111 0.67 0.89 43.50 4.35
169 170 1.867812 CGTGATCGACGTGCGTGAT 60.868 57.895 0.67 5.76 43.50 3.06
170 171 1.788621 CGTGATCGACGTGCGTGATC 61.789 60.000 19.81 19.81 43.50 2.92
171 172 0.796870 GTGATCGACGTGCGTGATCA 60.797 55.000 22.71 22.71 44.48 2.92
172 173 0.100503 TGATCGACGTGCGTGATCAT 59.899 50.000 22.71 5.42 42.50 2.45
173 174 0.772926 GATCGACGTGCGTGATCATC 59.227 55.000 20.79 0.00 41.80 2.92
174 175 0.930282 ATCGACGTGCGTGATCATCG 60.930 55.000 0.67 2.96 41.80 3.84
175 176 2.568031 CGACGTGCGTGATCATCGG 61.568 63.158 15.96 4.03 34.64 4.18
176 177 2.202743 ACGTGCGTGATCATCGGG 60.203 61.111 15.96 1.90 0.00 5.14
177 178 3.630148 CGTGCGTGATCATCGGGC 61.630 66.667 15.96 10.56 0.00 6.13
178 179 3.630148 GTGCGTGATCATCGGGCG 61.630 66.667 15.96 8.60 0.00 6.13
179 180 4.889856 TGCGTGATCATCGGGCGG 62.890 66.667 15.96 0.00 0.00 6.13
190 191 4.951963 CGGGCGGGCGAGAAGATC 62.952 72.222 0.00 0.00 0.00 2.75
200 201 1.413382 CGAGAAGATCGTGCATAGGC 58.587 55.000 0.00 0.00 46.62 3.93
201 202 1.789506 GAGAAGATCGTGCATAGGCC 58.210 55.000 0.00 0.00 40.13 5.19
202 203 1.342819 GAGAAGATCGTGCATAGGCCT 59.657 52.381 11.78 11.78 40.13 5.19
203 204 1.765314 AGAAGATCGTGCATAGGCCTT 59.235 47.619 12.58 0.00 40.13 4.35
204 205 2.965831 AGAAGATCGTGCATAGGCCTTA 59.034 45.455 12.58 0.00 40.13 2.69
205 206 3.580458 AGAAGATCGTGCATAGGCCTTAT 59.420 43.478 12.58 0.00 40.13 1.73
206 207 4.040952 AGAAGATCGTGCATAGGCCTTATT 59.959 41.667 12.58 0.00 40.13 1.40
207 208 4.357918 AGATCGTGCATAGGCCTTATTT 57.642 40.909 12.58 0.00 40.13 1.40
208 209 4.718961 AGATCGTGCATAGGCCTTATTTT 58.281 39.130 12.58 0.00 40.13 1.82
209 210 4.757149 AGATCGTGCATAGGCCTTATTTTC 59.243 41.667 12.58 0.00 40.13 2.29
210 211 3.211045 TCGTGCATAGGCCTTATTTTCC 58.789 45.455 12.58 0.00 40.13 3.13
211 212 2.293399 CGTGCATAGGCCTTATTTTCCC 59.707 50.000 12.58 0.00 40.13 3.97
212 213 2.293399 GTGCATAGGCCTTATTTTCCCG 59.707 50.000 12.58 0.00 40.13 5.14
213 214 2.092103 TGCATAGGCCTTATTTTCCCGT 60.092 45.455 12.58 0.00 40.13 5.28
214 215 3.136809 TGCATAGGCCTTATTTTCCCGTA 59.863 43.478 12.58 0.00 40.13 4.02
215 216 3.501062 GCATAGGCCTTATTTTCCCGTAC 59.499 47.826 12.58 0.00 0.00 3.67
216 217 4.710324 CATAGGCCTTATTTTCCCGTACA 58.290 43.478 12.58 0.00 0.00 2.90
217 218 2.995283 AGGCCTTATTTTCCCGTACAC 58.005 47.619 0.00 0.00 0.00 2.90
218 219 1.667212 GGCCTTATTTTCCCGTACACG 59.333 52.381 0.00 0.00 39.44 4.49
219 220 2.349590 GCCTTATTTTCCCGTACACGT 58.650 47.619 0.58 0.00 37.74 4.49
220 221 2.094734 GCCTTATTTTCCCGTACACGTG 59.905 50.000 15.48 15.48 37.74 4.49
221 222 3.328505 CCTTATTTTCCCGTACACGTGT 58.671 45.455 26.52 26.52 37.74 4.49
222 223 3.123959 CCTTATTTTCCCGTACACGTGTG 59.876 47.826 30.83 15.07 37.74 3.82
223 224 1.515081 ATTTTCCCGTACACGTGTGG 58.485 50.000 30.83 22.99 37.74 4.17
224 225 1.159098 TTTTCCCGTACACGTGTGGC 61.159 55.000 30.83 20.83 37.74 5.01
227 228 4.651008 CCGTACACGTGTGGCGGT 62.651 66.667 36.48 16.11 46.52 5.68
228 229 3.101428 CGTACACGTGTGGCGGTC 61.101 66.667 30.83 12.31 46.52 4.79
229 230 3.101428 GTACACGTGTGGCGGTCG 61.101 66.667 30.83 0.00 46.52 4.79
230 231 3.594775 TACACGTGTGGCGGTCGT 61.595 61.111 30.83 2.89 46.52 4.34
231 232 3.136345 TACACGTGTGGCGGTCGTT 62.136 57.895 30.83 2.09 46.52 3.85
232 233 2.625973 TACACGTGTGGCGGTCGTTT 62.626 55.000 30.83 1.52 46.52 3.60
233 234 2.512057 ACGTGTGGCGGTCGTTTT 60.512 55.556 0.00 0.00 46.52 2.43
234 235 2.107903 ACGTGTGGCGGTCGTTTTT 61.108 52.632 0.00 0.00 46.52 1.94
259 260 7.896383 TTTTTGGATTCCTGAAGGTATATGG 57.104 36.000 3.95 0.00 36.34 2.74
260 261 6.840090 TTTGGATTCCTGAAGGTATATGGA 57.160 37.500 3.95 0.00 36.34 3.41
261 262 5.825593 TGGATTCCTGAAGGTATATGGAC 57.174 43.478 3.95 0.00 36.34 4.02
262 263 4.283467 TGGATTCCTGAAGGTATATGGACG 59.717 45.833 3.95 0.00 36.34 4.79
263 264 4.283722 GGATTCCTGAAGGTATATGGACGT 59.716 45.833 0.00 0.00 36.34 4.34
264 265 4.931661 TTCCTGAAGGTATATGGACGTC 57.068 45.455 7.13 7.13 36.34 4.34
265 266 2.882761 TCCTGAAGGTATATGGACGTCG 59.117 50.000 9.92 0.00 36.34 5.12
266 267 2.030185 CCTGAAGGTATATGGACGTCGG 60.030 54.545 9.92 0.00 0.00 4.79
267 268 2.621998 CTGAAGGTATATGGACGTCGGT 59.378 50.000 9.92 2.87 0.00 4.69
268 269 2.620115 TGAAGGTATATGGACGTCGGTC 59.380 50.000 9.92 0.00 42.66 4.79
269 270 2.653234 AGGTATATGGACGTCGGTCT 57.347 50.000 9.92 0.00 42.97 3.85
270 271 3.777106 AGGTATATGGACGTCGGTCTA 57.223 47.619 9.92 0.00 42.97 2.59
271 272 4.298103 AGGTATATGGACGTCGGTCTAT 57.702 45.455 9.92 6.30 45.18 1.98
272 273 5.426689 AGGTATATGGACGTCGGTCTATA 57.573 43.478 9.92 5.39 46.47 1.31
273 274 5.181748 AGGTATATGGACGTCGGTCTATAC 58.818 45.833 9.92 15.31 45.63 1.47
274 275 4.033358 GGTATATGGACGTCGGTCTATACG 59.967 50.000 9.92 0.00 45.63 3.06
275 276 1.233019 ATGGACGTCGGTCTATACGG 58.767 55.000 9.92 0.00 41.92 4.02
276 277 0.107703 TGGACGTCGGTCTATACGGT 60.108 55.000 9.92 0.00 43.25 4.83
277 278 1.138069 TGGACGTCGGTCTATACGGTA 59.862 52.381 9.92 0.00 43.25 4.02
278 279 2.224281 TGGACGTCGGTCTATACGGTAT 60.224 50.000 9.92 5.87 43.25 2.73
279 280 2.158449 GGACGTCGGTCTATACGGTATG 59.842 54.545 9.92 1.76 43.25 2.39
280 281 3.059884 GACGTCGGTCTATACGGTATGA 58.940 50.000 10.86 3.98 43.25 2.15
281 282 3.668447 ACGTCGGTCTATACGGTATGAT 58.332 45.455 10.86 0.00 43.25 2.45
282 283 4.820897 ACGTCGGTCTATACGGTATGATA 58.179 43.478 10.86 0.00 43.25 2.15
283 284 4.867047 ACGTCGGTCTATACGGTATGATAG 59.133 45.833 10.86 0.87 43.25 2.08
284 285 4.269603 CGTCGGTCTATACGGTATGATAGG 59.730 50.000 10.86 0.00 35.51 2.57
285 286 5.423015 GTCGGTCTATACGGTATGATAGGA 58.577 45.833 10.86 0.86 0.00 2.94
286 287 5.523188 GTCGGTCTATACGGTATGATAGGAG 59.477 48.000 10.86 0.00 0.00 3.69
287 288 4.815308 CGGTCTATACGGTATGATAGGAGG 59.185 50.000 10.86 0.00 0.00 4.30
288 289 5.628666 CGGTCTATACGGTATGATAGGAGGT 60.629 48.000 10.86 0.00 0.00 3.85
289 290 5.589452 GGTCTATACGGTATGATAGGAGGTG 59.411 48.000 10.86 0.00 0.00 4.00
290 291 5.589452 GTCTATACGGTATGATAGGAGGTGG 59.411 48.000 10.86 0.00 0.00 4.61
291 292 2.011122 ACGGTATGATAGGAGGTGGG 57.989 55.000 0.00 0.00 0.00 4.61
292 293 1.219724 ACGGTATGATAGGAGGTGGGT 59.780 52.381 0.00 0.00 0.00 4.51
293 294 2.448194 ACGGTATGATAGGAGGTGGGTA 59.552 50.000 0.00 0.00 0.00 3.69
294 295 3.077088 ACGGTATGATAGGAGGTGGGTAT 59.923 47.826 0.00 0.00 0.00 2.73
295 296 4.293102 ACGGTATGATAGGAGGTGGGTATA 59.707 45.833 0.00 0.00 0.00 1.47
296 297 4.643784 CGGTATGATAGGAGGTGGGTATAC 59.356 50.000 0.00 0.00 0.00 1.47
297 298 4.643784 GGTATGATAGGAGGTGGGTATACG 59.356 50.000 0.00 0.00 0.00 3.06
298 299 3.889859 TGATAGGAGGTGGGTATACGT 57.110 47.619 0.00 0.00 0.00 3.57
299 300 4.188937 TGATAGGAGGTGGGTATACGTT 57.811 45.455 0.00 0.00 0.00 3.99
300 301 4.549668 TGATAGGAGGTGGGTATACGTTT 58.450 43.478 0.00 0.00 0.00 3.60
301 302 4.586001 TGATAGGAGGTGGGTATACGTTTC 59.414 45.833 0.00 0.00 0.00 2.78
302 303 3.111741 AGGAGGTGGGTATACGTTTCT 57.888 47.619 0.00 0.00 0.00 2.52
303 304 3.447950 AGGAGGTGGGTATACGTTTCTT 58.552 45.455 0.00 0.00 0.00 2.52
304 305 3.450096 AGGAGGTGGGTATACGTTTCTTC 59.550 47.826 0.00 0.00 0.00 2.87
305 306 3.450096 GGAGGTGGGTATACGTTTCTTCT 59.550 47.826 0.00 0.00 0.00 2.85
306 307 4.430908 GAGGTGGGTATACGTTTCTTCTG 58.569 47.826 0.00 0.00 0.00 3.02
307 308 3.836562 AGGTGGGTATACGTTTCTTCTGT 59.163 43.478 0.00 0.00 0.00 3.41
308 309 5.018809 AGGTGGGTATACGTTTCTTCTGTA 58.981 41.667 0.00 0.00 0.00 2.74
309 310 5.659971 AGGTGGGTATACGTTTCTTCTGTAT 59.340 40.000 0.00 0.00 33.62 2.29
310 311 5.751990 GGTGGGTATACGTTTCTTCTGTATG 59.248 44.000 0.00 0.00 31.63 2.39
311 312 6.406177 GGTGGGTATACGTTTCTTCTGTATGA 60.406 42.308 0.00 0.00 31.63 2.15
312 313 6.474751 GTGGGTATACGTTTCTTCTGTATGAC 59.525 42.308 0.00 0.00 31.63 3.06
313 314 5.981915 GGGTATACGTTTCTTCTGTATGACC 59.018 44.000 0.00 0.00 31.63 4.02
314 315 6.406177 GGGTATACGTTTCTTCTGTATGACCA 60.406 42.308 0.00 0.00 31.32 4.02
315 316 7.208080 GGTATACGTTTCTTCTGTATGACCAT 58.792 38.462 0.00 0.00 31.63 3.55
316 317 7.709613 GGTATACGTTTCTTCTGTATGACCATT 59.290 37.037 0.00 0.00 31.63 3.16
317 318 9.740239 GTATACGTTTCTTCTGTATGACCATTA 57.260 33.333 0.00 0.00 31.63 1.90
319 320 7.539712 ACGTTTCTTCTGTATGACCATTATG 57.460 36.000 0.00 0.00 0.00 1.90
320 321 6.037172 ACGTTTCTTCTGTATGACCATTATGC 59.963 38.462 0.00 0.00 0.00 3.14
321 322 6.511767 CGTTTCTTCTGTATGACCATTATGCC 60.512 42.308 0.00 0.00 0.00 4.40
322 323 4.973168 TCTTCTGTATGACCATTATGCCC 58.027 43.478 0.00 0.00 0.00 5.36
323 324 4.660303 TCTTCTGTATGACCATTATGCCCT 59.340 41.667 0.00 0.00 0.00 5.19
324 325 5.132648 TCTTCTGTATGACCATTATGCCCTT 59.867 40.000 0.00 0.00 0.00 3.95
325 326 4.973168 TCTGTATGACCATTATGCCCTTC 58.027 43.478 0.00 0.00 0.00 3.46
326 327 4.660303 TCTGTATGACCATTATGCCCTTCT 59.340 41.667 0.00 0.00 0.00 2.85
327 328 5.132648 TCTGTATGACCATTATGCCCTTCTT 59.867 40.000 0.00 0.00 0.00 2.52
328 329 5.376625 TGTATGACCATTATGCCCTTCTTC 58.623 41.667 0.00 0.00 0.00 2.87
329 330 4.524802 ATGACCATTATGCCCTTCTTCA 57.475 40.909 0.00 0.00 0.00 3.02
330 331 4.524802 TGACCATTATGCCCTTCTTCAT 57.475 40.909 0.00 0.00 0.00 2.57
331 332 4.870636 TGACCATTATGCCCTTCTTCATT 58.129 39.130 0.00 0.00 0.00 2.57
332 333 5.271598 TGACCATTATGCCCTTCTTCATTT 58.728 37.500 0.00 0.00 0.00 2.32
333 334 5.721000 TGACCATTATGCCCTTCTTCATTTT 59.279 36.000 0.00 0.00 0.00 1.82
334 335 5.981174 ACCATTATGCCCTTCTTCATTTTG 58.019 37.500 0.00 0.00 0.00 2.44
335 336 5.484998 ACCATTATGCCCTTCTTCATTTTGT 59.515 36.000 0.00 0.00 0.00 2.83
336 337 5.813672 CCATTATGCCCTTCTTCATTTTGTG 59.186 40.000 0.00 0.00 0.00 3.33
337 338 3.967332 ATGCCCTTCTTCATTTTGTGG 57.033 42.857 0.00 0.00 0.00 4.17
338 339 1.969923 TGCCCTTCTTCATTTTGTGGG 59.030 47.619 0.00 0.00 36.41 4.61
339 340 1.276138 GCCCTTCTTCATTTTGTGGGG 59.724 52.381 0.00 0.00 34.09 4.96
340 341 1.901833 CCCTTCTTCATTTTGTGGGGG 59.098 52.381 0.00 0.00 0.00 5.40
341 342 2.492567 CCCTTCTTCATTTTGTGGGGGA 60.493 50.000 0.00 0.00 33.68 4.81
342 343 2.827921 CCTTCTTCATTTTGTGGGGGAG 59.172 50.000 0.00 0.00 0.00 4.30
343 344 2.603075 TCTTCATTTTGTGGGGGAGG 57.397 50.000 0.00 0.00 0.00 4.30
344 345 1.077005 TCTTCATTTTGTGGGGGAGGG 59.923 52.381 0.00 0.00 0.00 4.30
345 346 0.116143 TTCATTTTGTGGGGGAGGGG 59.884 55.000 0.00 0.00 0.00 4.79
346 347 1.306056 CATTTTGTGGGGGAGGGGG 60.306 63.158 0.00 0.00 0.00 5.40
366 367 3.056328 GGGACCACCGAAGCAAGC 61.056 66.667 0.00 0.00 36.97 4.01
367 368 3.056328 GGACCACCGAAGCAAGCC 61.056 66.667 0.00 0.00 0.00 4.35
368 369 2.032681 GACCACCGAAGCAAGCCT 59.967 61.111 0.00 0.00 0.00 4.58
369 370 2.032681 ACCACCGAAGCAAGCCTC 59.967 61.111 0.00 0.00 0.00 4.70
376 377 0.537188 CGAAGCAAGCCTCTTCCCTA 59.463 55.000 5.09 0.00 37.29 3.53
390 391 0.759436 TCCCTACATTCCCGCCTCTC 60.759 60.000 0.00 0.00 0.00 3.20
403 407 0.615331 GCCTCTCATGAACACCCTCA 59.385 55.000 0.00 0.00 0.00 3.86
480 484 1.700955 TCCGAGACCTATAACTGGCC 58.299 55.000 0.00 0.00 0.00 5.36
482 486 1.341531 CCGAGACCTATAACTGGCCAG 59.658 57.143 31.60 31.60 0.00 4.85
557 565 1.005037 GGCTTTGCCTTTTTCGGGG 60.005 57.895 0.73 0.00 46.69 5.73
598 606 3.891049 AGGTTCACTCATCTAATTGCCC 58.109 45.455 0.00 0.00 0.00 5.36
669 679 4.791069 GCCCGTACCAGGAGGGGA 62.791 72.222 12.00 0.00 45.85 4.81
758 768 3.102515 CAAGCTCTGCATGCAACAC 57.897 52.632 22.88 13.23 0.00 3.32
759 769 0.312729 CAAGCTCTGCATGCAACACA 59.687 50.000 22.88 5.02 0.00 3.72
760 770 1.034356 AAGCTCTGCATGCAACACAA 58.966 45.000 22.88 4.16 0.00 3.33
761 771 1.254026 AGCTCTGCATGCAACACAAT 58.746 45.000 22.88 2.89 0.00 2.71
762 772 1.067846 AGCTCTGCATGCAACACAATG 60.068 47.619 22.88 8.21 0.00 2.82
763 773 1.346365 CTCTGCATGCAACACAATGC 58.654 50.000 22.88 0.73 46.58 3.56
796 815 2.571202 TGGGGATTTTGCATTTCCTTCC 59.429 45.455 9.25 4.89 0.00 3.46
806 825 2.095212 GCATTTCCTTCCCGTTTCTCAC 60.095 50.000 0.00 0.00 0.00 3.51
807 826 3.412386 CATTTCCTTCCCGTTTCTCACT 58.588 45.455 0.00 0.00 0.00 3.41
808 827 3.570912 TTTCCTTCCCGTTTCTCACTT 57.429 42.857 0.00 0.00 0.00 3.16
809 828 3.570912 TTCCTTCCCGTTTCTCACTTT 57.429 42.857 0.00 0.00 0.00 2.66
810 829 3.121738 TCCTTCCCGTTTCTCACTTTC 57.878 47.619 0.00 0.00 0.00 2.62
811 830 2.152016 CCTTCCCGTTTCTCACTTTCC 58.848 52.381 0.00 0.00 0.00 3.13
812 831 2.152016 CTTCCCGTTTCTCACTTTCCC 58.848 52.381 0.00 0.00 0.00 3.97
813 832 1.133363 TCCCGTTTCTCACTTTCCCA 58.867 50.000 0.00 0.00 0.00 4.37
828 850 7.509546 TCACTTTCCCAGGATCATAAGAATAC 58.490 38.462 3.43 0.00 0.00 1.89
850 872 2.618053 CGCTTCTCGTAATCCTGGTTT 58.382 47.619 0.00 0.00 0.00 3.27
854 876 4.620803 GCTTCTCGTAATCCTGGTTTGAGA 60.621 45.833 0.21 2.62 0.00 3.27
878 900 8.589338 AGACCATAATTATCGAAGCTAGAACAT 58.411 33.333 0.00 0.00 0.00 2.71
893 915 3.461773 CATGGGGTCGACGCTCCT 61.462 66.667 28.74 13.12 0.00 3.69
922 944 1.547675 GCCCACCTTGATTCAGAACCA 60.548 52.381 0.00 0.00 0.00 3.67
960 984 0.321653 GTTCCGCATCTGTTCAGGGT 60.322 55.000 0.00 0.00 0.00 4.34
1043 1067 3.189495 TCCGCGAATGTAAGCATTTTTCA 59.811 39.130 8.23 0.00 44.61 2.69
1047 1071 4.173256 CGAATGTAAGCATTTTTCACCCC 58.827 43.478 0.00 0.00 44.61 4.95
1048 1072 4.503910 GAATGTAAGCATTTTTCACCCCC 58.496 43.478 0.00 0.00 44.61 5.40
1088 1112 6.406624 GCAGGAATCTGAATCCATGTTCATTT 60.407 38.462 13.97 0.00 43.49 2.32
1091 1115 7.835682 AGGAATCTGAATCCATGTTCATTTACA 59.164 33.333 13.97 0.00 39.55 2.41
1105 1130 5.621197 TCATTTACACATTCCAAGTTCCG 57.379 39.130 0.00 0.00 0.00 4.30
1116 1141 1.064952 CCAAGTTCCGTTTCCACACAC 59.935 52.381 0.00 0.00 0.00 3.82
1138 1166 3.674682 CGATCCTCCTCTGTTCTGTTCAC 60.675 52.174 0.00 0.00 0.00 3.18
1178 1206 2.031012 TGTTCCCTGTGCAGAGCG 59.969 61.111 5.08 0.00 0.00 5.03
1297 1325 8.197592 TCTCCCTAATAATAAAGCACGGATTA 57.802 34.615 0.00 0.00 0.00 1.75
1332 1973 3.059188 CACCGTCACAATACGCTTTCTTT 60.059 43.478 0.00 0.00 41.51 2.52
1799 2457 1.276844 GCACAATCGCGCCAGATAC 59.723 57.895 0.00 0.00 0.00 2.24
2223 2889 2.086869 CCCGTCAAAATGCATGAGAGT 58.913 47.619 0.00 0.00 0.00 3.24
2523 3191 3.448934 AGATGTGGACCTGAGAATGAGT 58.551 45.455 0.00 0.00 0.00 3.41
2617 3285 1.388837 GGGCTGTTTTCACCCGTTGT 61.389 55.000 0.00 0.00 33.77 3.32
2764 3436 5.949354 TCCAAAATCCAAGGTGGTACTAATG 59.051 40.000 0.00 0.00 39.03 1.90
2969 3648 2.094182 GTCACAATACGCTTCCTCCTGA 60.094 50.000 0.00 0.00 0.00 3.86
3064 3791 4.025401 GCTTGGGCCACGTTCACG 62.025 66.667 5.23 0.00 46.33 4.35
3129 3856 3.181465 GGCTTCAACCTGATCTATTCGGA 60.181 47.826 0.00 0.00 31.81 4.55
3160 3887 2.847435 GATTCGAACCGGGGAACGCT 62.847 60.000 6.32 0.00 42.52 5.07
3168 3895 2.202892 GGGGAACGCTAGGCTTCG 60.203 66.667 0.00 0.00 38.67 3.79
3345 4075 1.591768 TCCGGGATTTAGGGCTTCTT 58.408 50.000 0.00 0.00 0.00 2.52
3446 4177 3.599584 CGTAGGGAGGCGTTCTCA 58.400 61.111 9.46 0.00 44.19 3.27
3454 4185 0.884704 GAGGCGTTCTCAACTGCCAA 60.885 55.000 18.14 0.00 46.34 4.52
3576 4307 0.902984 TTCGCCTGCTCCTAACCTCA 60.903 55.000 0.00 0.00 0.00 3.86
3578 4309 0.531532 CGCCTGCTCCTAACCTCATG 60.532 60.000 0.00 0.00 0.00 3.07
3579 4310 0.543749 GCCTGCTCCTAACCTCATGT 59.456 55.000 0.00 0.00 0.00 3.21
3580 4311 1.065126 GCCTGCTCCTAACCTCATGTT 60.065 52.381 0.00 0.00 41.11 2.71
3581 4312 2.170607 GCCTGCTCCTAACCTCATGTTA 59.829 50.000 0.00 0.00 38.42 2.41
3642 4373 1.546476 GTCGACTGGATTGAGTGGAGT 59.454 52.381 8.70 0.00 32.08 3.85
3687 4420 4.961511 TGTGCACACCGTCGCTCC 62.962 66.667 17.42 0.00 0.00 4.70
3692 4425 3.432588 ACACCGTCGCTCCTCTCG 61.433 66.667 0.00 0.00 0.00 4.04
3709 4442 0.400213 TCGATGGTTTGCTCACCCTT 59.600 50.000 2.77 0.00 35.73 3.95
3752 4485 1.301401 GTCCTTGCACGTACAGCCA 60.301 57.895 5.00 0.00 0.00 4.75
3970 4706 0.107703 CAAAGACAGCGCCCTCCATA 60.108 55.000 2.29 0.00 0.00 2.74
4067 4803 5.895636 ACGCTCCAATGTAAATTTGATGA 57.104 34.783 0.00 0.00 0.00 2.92
4552 5630 7.687445 TGTCAGAACATGTCATATTTTCATCG 58.313 34.615 0.00 0.00 0.00 3.84
4694 5823 6.650807 CCTGCTTACACTTTCATTAGTTCAGA 59.349 38.462 0.00 0.00 0.00 3.27
4719 5848 8.763049 AGTGTTCATTATCATATCATACCACG 57.237 34.615 0.00 0.00 0.00 4.94
4916 6185 9.337396 CATTACACATAGTAAATGGTACCATGT 57.663 33.333 28.00 24.61 45.25 3.21
4931 6200 3.974719 ACCATGTTATACCACATTGCCA 58.025 40.909 0.00 0.00 35.03 4.92
5191 6742 2.261586 TGCAACGCACGGGCATTTA 61.262 52.632 11.77 0.00 41.24 1.40
5197 6748 2.750948 ACGCACGGGCATTTATACTAG 58.249 47.619 11.77 0.00 41.24 2.57
5198 6749 2.363038 ACGCACGGGCATTTATACTAGA 59.637 45.455 11.77 0.00 41.24 2.43
5199 6750 3.181473 ACGCACGGGCATTTATACTAGAA 60.181 43.478 11.77 0.00 41.24 2.10
5205 6756 7.386848 GCACGGGCATTTATACTAGAAATAAGA 59.613 37.037 3.77 0.00 40.72 2.10
5237 6788 1.909700 ATTCCACGCCTGTTCATGTT 58.090 45.000 0.00 0.00 0.00 2.71
5260 6812 2.232941 TGGGGAGTAAACGTCTGATGAC 59.767 50.000 3.44 0.00 39.70 3.06
5318 6870 1.912043 CAGGGAGGAGAACAAGGTGAT 59.088 52.381 0.00 0.00 0.00 3.06
5409 6961 3.003173 CTGCCTCCGGACCCAGAA 61.003 66.667 17.70 0.00 0.00 3.02
5526 7081 1.674057 CAACGAGTTCCAGAGGCCT 59.326 57.895 3.86 3.86 0.00 5.19
5573 7128 1.335697 GACGAGAACACGGAAGCGTC 61.336 60.000 0.00 0.00 40.75 5.19
5594 7149 5.181622 CGTCTAGGATCATGTAGGGAGTAAC 59.818 48.000 0.00 0.00 0.00 2.50
5629 7184 2.559668 CTGATTTCGGGGCGGTAGTATA 59.440 50.000 0.00 0.00 0.00 1.47
5631 7186 4.343231 TGATTTCGGGGCGGTAGTATATA 58.657 43.478 0.00 0.00 0.00 0.86
5633 7188 4.989279 TTTCGGGGCGGTAGTATATATC 57.011 45.455 0.00 0.00 0.00 1.63
5646 7201 8.244802 CGGTAGTATATATCTTCCTTGGTTCTG 58.755 40.741 0.00 0.00 0.00 3.02
5651 7206 9.425577 GTATATATCTTCCTTGGTTCTGCTAAC 57.574 37.037 0.00 0.00 0.00 2.34
5658 7213 4.003648 CCTTGGTTCTGCTAACTTACAGG 58.996 47.826 3.13 0.00 34.57 4.00
5661 7216 5.401531 TGGTTCTGCTAACTTACAGGTAG 57.598 43.478 3.13 0.00 38.53 3.18
5663 7218 5.169295 GGTTCTGCTAACTTACAGGTAGTG 58.831 45.833 0.00 0.00 37.81 2.74
5664 7219 5.047519 GGTTCTGCTAACTTACAGGTAGTGA 60.048 44.000 0.00 0.00 37.81 3.41
5669 7224 6.860080 TGCTAACTTACAGGTAGTGATGTAC 58.140 40.000 0.00 0.00 37.81 2.90
5671 7226 7.830697 TGCTAACTTACAGGTAGTGATGTACTA 59.169 37.037 0.00 0.00 37.81 1.82
5676 7231 9.129532 ACTTACAGGTAGTGATGTACTATAACC 57.870 37.037 0.00 0.00 43.44 2.85
5677 7232 9.128404 CTTACAGGTAGTGATGTACTATAACCA 57.872 37.037 0.00 0.00 43.44 3.67
5678 7233 9.650714 TTACAGGTAGTGATGTACTATAACCAT 57.349 33.333 0.00 0.00 43.44 3.55
5682 7237 9.209048 AGGTAGTGATGTACTATAACCATTTCA 57.791 33.333 0.00 0.00 43.44 2.69
5834 7389 3.634910 ACATTTACTCTTTTTGCACGGGT 59.365 39.130 0.00 0.00 0.00 5.28
5837 7392 2.922740 ACTCTTTTTGCACGGGTCTA 57.077 45.000 0.00 0.00 0.00 2.59
5846 7578 1.768275 TGCACGGGTCTATCCATGAAT 59.232 47.619 0.00 0.00 38.11 2.57
5890 7622 0.259938 ACATTTGGGATGGAGGGAGC 59.740 55.000 0.00 0.00 0.00 4.70
5896 7628 1.345422 TGGGATGGAGGGAGCATTACT 60.345 52.381 0.00 0.00 0.00 2.24
5937 7669 8.068977 GCTTTTATTCTCTGAGCAGTTCATATG 58.931 37.037 0.00 0.00 34.68 1.78
5958 7690 0.392336 TGGTGCAAAATGTTGGGCTC 59.608 50.000 0.00 0.00 35.10 4.70
5977 7709 4.082733 GGCTCCTCTTGGAATAAACACAAC 60.083 45.833 0.00 0.00 42.66 3.32
6038 7793 6.073314 ACAGTACTAACTTAAGGTGTCTCCA 58.927 40.000 2.38 0.00 34.06 3.86
6153 7920 3.692576 GATGTGCATCATCTTGCTGAAC 58.307 45.455 17.00 0.00 46.64 3.18
6154 7921 2.506444 TGTGCATCATCTTGCTGAACA 58.494 42.857 0.00 0.00 43.18 3.18
6155 7922 2.227149 TGTGCATCATCTTGCTGAACAC 59.773 45.455 0.00 0.00 43.18 3.32
6156 7923 1.814394 TGCATCATCTTGCTGAACACC 59.186 47.619 0.00 0.00 43.18 4.16
6157 7924 1.814394 GCATCATCTTGCTGAACACCA 59.186 47.619 0.00 0.00 39.57 4.17
6158 7925 2.426024 GCATCATCTTGCTGAACACCAT 59.574 45.455 0.00 0.00 39.57 3.55
6159 7926 3.733988 GCATCATCTTGCTGAACACCATG 60.734 47.826 0.00 0.00 39.57 3.66
6171 7938 5.863935 GCTGAACACCATGAAAATAAAGACC 59.136 40.000 0.00 0.00 0.00 3.85
6225 7999 5.183904 CCTGCTGGTAAAAATAGCTTGAAGT 59.816 40.000 0.51 0.00 38.25 3.01
6459 8244 1.604755 GCAAACATTACACGTGGACCA 59.395 47.619 21.57 0.00 0.00 4.02
6460 8245 2.227865 GCAAACATTACACGTGGACCAT 59.772 45.455 21.57 0.00 0.00 3.55
6471 8256 1.924524 CGTGGACCATTACAGCTAACG 59.075 52.381 0.00 0.00 0.00 3.18
6477 8262 3.000727 ACCATTACAGCTAACGTTGCTC 58.999 45.455 18.29 5.46 38.92 4.26
6478 8263 2.029244 CCATTACAGCTAACGTTGCTCG 59.971 50.000 18.29 15.94 46.00 5.03
6479 8264 1.705256 TTACAGCTAACGTTGCTCGG 58.295 50.000 18.29 12.66 44.69 4.63
6480 8265 0.599558 TACAGCTAACGTTGCTCGGT 59.400 50.000 18.29 16.40 44.69 4.69
6481 8266 0.944311 ACAGCTAACGTTGCTCGGTG 60.944 55.000 18.29 16.38 44.69 4.94
6482 8267 0.666274 CAGCTAACGTTGCTCGGTGA 60.666 55.000 18.29 0.00 44.69 4.02
6558 8343 3.941836 GCCAAGCTATCGTGCGGC 61.942 66.667 0.00 0.00 38.13 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.700365 TGACTGACCGCGCTGTCG 62.700 66.667 24.03 20.23 38.94 4.35
35 36 3.106407 GTGACTGACCGCGCTGTC 61.106 66.667 23.20 23.20 37.29 3.51
36 37 3.848347 CTGTGACTGACCGCGCTGT 62.848 63.158 3.38 3.38 0.00 4.40
37 38 3.108289 CTGTGACTGACCGCGCTG 61.108 66.667 5.56 0.00 0.00 5.18
41 42 3.649277 ATCGGCTGTGACTGACCGC 62.649 63.158 16.06 0.00 45.23 5.68
42 43 1.807165 CATCGGCTGTGACTGACCG 60.807 63.158 15.19 15.19 46.97 4.79
43 44 0.459237 CTCATCGGCTGTGACTGACC 60.459 60.000 0.00 0.00 0.00 4.02
44 45 1.080995 GCTCATCGGCTGTGACTGAC 61.081 60.000 0.00 0.00 0.00 3.51
45 46 1.216444 GCTCATCGGCTGTGACTGA 59.784 57.895 0.00 0.00 0.00 3.41
46 47 1.812922 GGCTCATCGGCTGTGACTG 60.813 63.158 0.00 0.00 34.85 3.51
47 48 2.581354 GGCTCATCGGCTGTGACT 59.419 61.111 0.00 0.00 34.85 3.41
48 49 2.887568 CGGCTCATCGGCTGTGAC 60.888 66.667 0.00 0.00 35.72 3.67
56 57 3.872728 TCGTCCGACGGCTCATCG 61.873 66.667 20.35 8.71 42.81 3.84
57 58 2.278013 GTCGTCCGACGGCTCATC 60.278 66.667 18.10 0.89 43.82 2.92
71 72 1.416049 CCGCATCTGAACGTTGTCG 59.584 57.895 5.00 0.00 43.34 4.35
72 73 1.132640 GCCGCATCTGAACGTTGTC 59.867 57.895 5.00 0.00 0.00 3.18
73 74 2.667318 CGCCGCATCTGAACGTTGT 61.667 57.895 5.00 0.00 0.00 3.32
74 75 2.096406 CGCCGCATCTGAACGTTG 59.904 61.111 5.00 0.00 0.00 4.10
75 76 3.118454 CCGCCGCATCTGAACGTT 61.118 61.111 0.00 0.00 0.00 3.99
90 91 4.856801 CCTGAACCCCATCCGCCG 62.857 72.222 0.00 0.00 0.00 6.46
93 94 4.856801 CCGCCTGAACCCCATCCG 62.857 72.222 0.00 0.00 0.00 4.18
127 128 3.853330 CCAACTGTGCGATCGCCG 61.853 66.667 35.12 24.80 41.09 6.46
128 129 1.369091 ATTCCAACTGTGCGATCGCC 61.369 55.000 35.12 25.81 41.09 5.54
129 130 0.247814 CATTCCAACTGTGCGATCGC 60.248 55.000 32.48 32.48 42.35 4.58
130 131 0.374758 CCATTCCAACTGTGCGATCG 59.625 55.000 11.69 11.69 0.00 3.69
131 132 1.398390 GTCCATTCCAACTGTGCGATC 59.602 52.381 0.00 0.00 0.00 3.69
132 133 1.453155 GTCCATTCCAACTGTGCGAT 58.547 50.000 0.00 0.00 0.00 4.58
133 134 0.948623 CGTCCATTCCAACTGTGCGA 60.949 55.000 0.00 0.00 0.00 5.10
134 135 1.227999 ACGTCCATTCCAACTGTGCG 61.228 55.000 0.00 0.00 0.00 5.34
135 136 0.238289 CACGTCCATTCCAACTGTGC 59.762 55.000 0.00 0.00 0.00 4.57
136 137 1.877637 TCACGTCCATTCCAACTGTG 58.122 50.000 0.00 0.00 0.00 3.66
137 138 2.699954 GATCACGTCCATTCCAACTGT 58.300 47.619 0.00 0.00 0.00 3.55
138 139 1.660607 CGATCACGTCCATTCCAACTG 59.339 52.381 0.00 0.00 34.56 3.16
139 140 1.548719 TCGATCACGTCCATTCCAACT 59.451 47.619 0.00 0.00 40.69 3.16
140 141 1.659098 GTCGATCACGTCCATTCCAAC 59.341 52.381 0.00 0.00 40.69 3.77
141 142 1.734377 CGTCGATCACGTCCATTCCAA 60.734 52.381 8.84 0.00 44.07 3.53
142 143 0.179148 CGTCGATCACGTCCATTCCA 60.179 55.000 8.84 0.00 44.07 3.53
143 144 2.578369 CGTCGATCACGTCCATTCC 58.422 57.895 8.84 0.00 44.07 3.01
152 153 0.796870 TGATCACGCACGTCGATCAC 60.797 55.000 22.53 9.16 41.67 3.06
153 154 0.100503 ATGATCACGCACGTCGATCA 59.899 50.000 25.61 25.61 41.68 2.92
154 155 0.772926 GATGATCACGCACGTCGATC 59.227 55.000 19.50 19.50 41.67 3.69
155 156 0.930282 CGATGATCACGCACGTCGAT 60.930 55.000 8.14 0.36 44.79 3.59
156 157 1.582680 CGATGATCACGCACGTCGA 60.583 57.895 8.14 0.00 44.79 4.20
157 158 2.568031 CCGATGATCACGCACGTCG 61.568 63.158 0.00 1.92 42.66 5.12
158 159 2.230940 CCCGATGATCACGCACGTC 61.231 63.158 0.00 0.00 0.00 4.34
159 160 2.202743 CCCGATGATCACGCACGT 60.203 61.111 0.00 0.00 0.00 4.49
160 161 3.630148 GCCCGATGATCACGCACG 61.630 66.667 0.00 1.99 0.00 5.34
161 162 3.630148 CGCCCGATGATCACGCAC 61.630 66.667 0.00 0.00 0.00 5.34
162 163 4.889856 CCGCCCGATGATCACGCA 62.890 66.667 0.00 0.00 0.00 5.24
173 174 4.951963 GATCTTCTCGCCCGCCCG 62.952 72.222 0.00 0.00 0.00 6.13
174 175 4.951963 CGATCTTCTCGCCCGCCC 62.952 72.222 0.00 0.00 41.14 6.13
182 183 1.342819 AGGCCTATGCACGATCTTCTC 59.657 52.381 1.29 0.00 40.13 2.87
183 184 1.418334 AGGCCTATGCACGATCTTCT 58.582 50.000 1.29 0.00 40.13 2.85
184 185 2.246719 AAGGCCTATGCACGATCTTC 57.753 50.000 5.16 0.00 40.13 2.87
185 186 4.357918 AATAAGGCCTATGCACGATCTT 57.642 40.909 5.16 0.00 40.13 2.40
186 187 4.357918 AAATAAGGCCTATGCACGATCT 57.642 40.909 5.16 0.00 40.13 2.75
187 188 4.083271 GGAAAATAAGGCCTATGCACGATC 60.083 45.833 5.16 0.00 40.13 3.69
188 189 3.821033 GGAAAATAAGGCCTATGCACGAT 59.179 43.478 5.16 0.00 40.13 3.73
189 190 3.211045 GGAAAATAAGGCCTATGCACGA 58.789 45.455 5.16 0.00 40.13 4.35
190 191 2.293399 GGGAAAATAAGGCCTATGCACG 59.707 50.000 5.16 0.00 40.13 5.34
191 192 2.293399 CGGGAAAATAAGGCCTATGCAC 59.707 50.000 5.16 0.00 40.13 4.57
192 193 2.092103 ACGGGAAAATAAGGCCTATGCA 60.092 45.455 5.16 0.00 40.13 3.96
193 194 2.583143 ACGGGAAAATAAGGCCTATGC 58.417 47.619 5.16 0.00 0.00 3.14
194 195 4.514066 GTGTACGGGAAAATAAGGCCTATG 59.486 45.833 5.16 0.00 0.00 2.23
195 196 4.711399 GTGTACGGGAAAATAAGGCCTAT 58.289 43.478 5.16 0.00 0.00 2.57
196 197 3.430651 CGTGTACGGGAAAATAAGGCCTA 60.431 47.826 5.16 0.00 35.37 3.93
197 198 2.678769 CGTGTACGGGAAAATAAGGCCT 60.679 50.000 0.00 0.00 35.37 5.19
198 199 1.667212 CGTGTACGGGAAAATAAGGCC 59.333 52.381 0.00 0.00 35.37 5.19
199 200 2.349590 ACGTGTACGGGAAAATAAGGC 58.650 47.619 9.40 0.00 44.95 4.35
210 211 4.651008 ACCGCCACACGTGTACGG 62.651 66.667 39.42 39.42 46.95 4.02
211 212 3.101428 GACCGCCACACGTGTACG 61.101 66.667 27.26 27.26 46.33 3.67
212 213 3.101428 CGACCGCCACACGTGTAC 61.101 66.667 22.90 15.53 41.42 2.90
213 214 2.625973 AAACGACCGCCACACGTGTA 62.626 55.000 22.90 0.00 41.42 2.90
214 215 4.517815 AACGACCGCCACACGTGT 62.518 61.111 17.22 17.22 41.42 4.49
215 216 2.312398 AAAAACGACCGCCACACGTG 62.312 55.000 15.48 15.48 41.42 4.49
216 217 2.107903 AAAAACGACCGCCACACGT 61.108 52.632 0.00 0.00 41.42 4.49
217 218 2.710698 AAAAACGACCGCCACACG 59.289 55.556 0.00 0.00 43.15 4.49
235 236 7.559897 GTCCATATACCTTCAGGAATCCAAAAA 59.440 37.037 0.61 0.00 38.94 1.94
236 237 7.060421 GTCCATATACCTTCAGGAATCCAAAA 58.940 38.462 0.61 0.00 38.94 2.44
237 238 6.601332 GTCCATATACCTTCAGGAATCCAAA 58.399 40.000 0.61 0.00 38.94 3.28
238 239 5.221641 CGTCCATATACCTTCAGGAATCCAA 60.222 44.000 0.61 0.00 38.94 3.53
239 240 4.283467 CGTCCATATACCTTCAGGAATCCA 59.717 45.833 0.61 0.00 38.94 3.41
240 241 4.283722 ACGTCCATATACCTTCAGGAATCC 59.716 45.833 0.00 0.00 38.94 3.01
241 242 5.470047 ACGTCCATATACCTTCAGGAATC 57.530 43.478 0.00 0.00 38.94 2.52
242 243 4.022242 CGACGTCCATATACCTTCAGGAAT 60.022 45.833 10.58 0.00 38.94 3.01
243 244 3.317149 CGACGTCCATATACCTTCAGGAA 59.683 47.826 10.58 0.00 38.94 3.36
244 245 2.882761 CGACGTCCATATACCTTCAGGA 59.117 50.000 10.58 0.00 38.94 3.86
245 246 2.030185 CCGACGTCCATATACCTTCAGG 60.030 54.545 10.58 0.00 42.17 3.86
246 247 2.621998 ACCGACGTCCATATACCTTCAG 59.378 50.000 10.58 0.00 0.00 3.02
247 248 2.620115 GACCGACGTCCATATACCTTCA 59.380 50.000 10.58 0.00 32.40 3.02
248 249 2.883386 AGACCGACGTCCATATACCTTC 59.117 50.000 10.58 0.00 40.12 3.46
249 250 2.941480 AGACCGACGTCCATATACCTT 58.059 47.619 10.58 0.00 40.12 3.50
250 251 2.653234 AGACCGACGTCCATATACCT 57.347 50.000 10.58 0.00 40.12 3.08
251 252 4.033358 CGTATAGACCGACGTCCATATACC 59.967 50.000 10.58 3.04 40.12 2.73
252 253 4.033358 CCGTATAGACCGACGTCCATATAC 59.967 50.000 10.58 14.57 40.12 1.47
253 254 4.183865 CCGTATAGACCGACGTCCATATA 58.816 47.826 10.58 4.99 40.12 0.86
254 255 3.005554 CCGTATAGACCGACGTCCATAT 58.994 50.000 10.58 5.93 40.12 1.78
255 256 2.224281 ACCGTATAGACCGACGTCCATA 60.224 50.000 10.58 0.00 40.12 2.74
256 257 1.233019 CCGTATAGACCGACGTCCAT 58.767 55.000 10.58 0.00 40.12 3.41
257 258 0.107703 ACCGTATAGACCGACGTCCA 60.108 55.000 10.58 0.00 40.12 4.02
258 259 1.865865 TACCGTATAGACCGACGTCC 58.134 55.000 10.58 0.00 40.12 4.79
259 260 3.059884 TCATACCGTATAGACCGACGTC 58.940 50.000 5.18 5.18 37.36 4.34
260 261 3.111853 TCATACCGTATAGACCGACGT 57.888 47.619 0.00 0.00 37.36 4.34
261 262 4.269603 CCTATCATACCGTATAGACCGACG 59.730 50.000 0.00 0.00 38.79 5.12
262 263 5.423015 TCCTATCATACCGTATAGACCGAC 58.577 45.833 0.00 0.00 0.00 4.79
263 264 5.396101 CCTCCTATCATACCGTATAGACCGA 60.396 48.000 0.00 0.00 0.00 4.69
264 265 4.815308 CCTCCTATCATACCGTATAGACCG 59.185 50.000 0.00 0.00 0.00 4.79
265 266 5.589452 CACCTCCTATCATACCGTATAGACC 59.411 48.000 0.00 0.00 0.00 3.85
266 267 5.589452 CCACCTCCTATCATACCGTATAGAC 59.411 48.000 0.00 0.00 0.00 2.59
267 268 5.339778 CCCACCTCCTATCATACCGTATAGA 60.340 48.000 0.00 0.00 0.00 1.98
268 269 4.888239 CCCACCTCCTATCATACCGTATAG 59.112 50.000 0.00 0.00 0.00 1.31
269 270 4.293102 ACCCACCTCCTATCATACCGTATA 59.707 45.833 0.00 0.00 0.00 1.47
270 271 3.077088 ACCCACCTCCTATCATACCGTAT 59.923 47.826 0.00 0.00 0.00 3.06
271 272 2.448194 ACCCACCTCCTATCATACCGTA 59.552 50.000 0.00 0.00 0.00 4.02
272 273 1.219724 ACCCACCTCCTATCATACCGT 59.780 52.381 0.00 0.00 0.00 4.83
273 274 2.011122 ACCCACCTCCTATCATACCG 57.989 55.000 0.00 0.00 0.00 4.02
274 275 4.643784 CGTATACCCACCTCCTATCATACC 59.356 50.000 0.00 0.00 0.00 2.73
275 276 5.259632 ACGTATACCCACCTCCTATCATAC 58.740 45.833 0.00 0.00 0.00 2.39
276 277 5.525454 ACGTATACCCACCTCCTATCATA 57.475 43.478 0.00 0.00 0.00 2.15
277 278 4.399483 ACGTATACCCACCTCCTATCAT 57.601 45.455 0.00 0.00 0.00 2.45
278 279 3.889859 ACGTATACCCACCTCCTATCA 57.110 47.619 0.00 0.00 0.00 2.15
279 280 4.831710 AGAAACGTATACCCACCTCCTATC 59.168 45.833 0.00 0.00 0.00 2.08
280 281 4.812653 AGAAACGTATACCCACCTCCTAT 58.187 43.478 0.00 0.00 0.00 2.57
281 282 4.255510 AGAAACGTATACCCACCTCCTA 57.744 45.455 0.00 0.00 0.00 2.94
282 283 3.111741 AGAAACGTATACCCACCTCCT 57.888 47.619 0.00 0.00 0.00 3.69
283 284 3.450096 AGAAGAAACGTATACCCACCTCC 59.550 47.826 0.00 0.00 0.00 4.30
284 285 4.081807 ACAGAAGAAACGTATACCCACCTC 60.082 45.833 0.00 0.00 0.00 3.85
285 286 3.836562 ACAGAAGAAACGTATACCCACCT 59.163 43.478 0.00 0.00 0.00 4.00
286 287 4.198028 ACAGAAGAAACGTATACCCACC 57.802 45.455 0.00 0.00 0.00 4.61
287 288 6.474751 GTCATACAGAAGAAACGTATACCCAC 59.525 42.308 0.00 0.00 0.00 4.61
288 289 6.406177 GGTCATACAGAAGAAACGTATACCCA 60.406 42.308 0.00 0.00 0.00 4.51
289 290 5.981915 GGTCATACAGAAGAAACGTATACCC 59.018 44.000 0.00 0.00 0.00 3.69
290 291 6.567050 TGGTCATACAGAAGAAACGTATACC 58.433 40.000 0.00 0.00 0.00 2.73
291 292 8.644318 AATGGTCATACAGAAGAAACGTATAC 57.356 34.615 0.00 0.00 0.00 1.47
293 294 9.261180 CATAATGGTCATACAGAAGAAACGTAT 57.739 33.333 0.00 0.00 0.00 3.06
294 295 7.223971 GCATAATGGTCATACAGAAGAAACGTA 59.776 37.037 0.00 0.00 0.00 3.57
295 296 6.037172 GCATAATGGTCATACAGAAGAAACGT 59.963 38.462 0.00 0.00 0.00 3.99
296 297 6.422223 GCATAATGGTCATACAGAAGAAACG 58.578 40.000 0.00 0.00 0.00 3.60
297 298 6.238759 GGGCATAATGGTCATACAGAAGAAAC 60.239 42.308 0.00 0.00 0.00 2.78
298 299 5.827797 GGGCATAATGGTCATACAGAAGAAA 59.172 40.000 0.00 0.00 0.00 2.52
299 300 5.132648 AGGGCATAATGGTCATACAGAAGAA 59.867 40.000 0.00 0.00 0.00 2.52
300 301 4.660303 AGGGCATAATGGTCATACAGAAGA 59.340 41.667 0.00 0.00 0.00 2.87
301 302 4.978099 AGGGCATAATGGTCATACAGAAG 58.022 43.478 0.00 0.00 0.00 2.85
302 303 5.132648 AGAAGGGCATAATGGTCATACAGAA 59.867 40.000 0.00 0.00 0.00 3.02
303 304 4.660303 AGAAGGGCATAATGGTCATACAGA 59.340 41.667 0.00 0.00 0.00 3.41
304 305 4.978099 AGAAGGGCATAATGGTCATACAG 58.022 43.478 0.00 0.00 0.00 2.74
305 306 5.104151 TGAAGAAGGGCATAATGGTCATACA 60.104 40.000 0.00 0.00 0.00 2.29
306 307 5.376625 TGAAGAAGGGCATAATGGTCATAC 58.623 41.667 0.00 0.00 0.00 2.39
307 308 5.645056 TGAAGAAGGGCATAATGGTCATA 57.355 39.130 0.00 0.00 0.00 2.15
308 309 4.524802 TGAAGAAGGGCATAATGGTCAT 57.475 40.909 0.00 0.00 0.00 3.06
309 310 4.524802 ATGAAGAAGGGCATAATGGTCA 57.475 40.909 0.00 0.00 0.00 4.02
310 311 5.859205 AAATGAAGAAGGGCATAATGGTC 57.141 39.130 0.00 0.00 0.00 4.02
311 312 5.484998 ACAAAATGAAGAAGGGCATAATGGT 59.515 36.000 0.00 0.00 0.00 3.55
312 313 5.813672 CACAAAATGAAGAAGGGCATAATGG 59.186 40.000 0.00 0.00 0.00 3.16
313 314 5.813672 CCACAAAATGAAGAAGGGCATAATG 59.186 40.000 0.00 0.00 0.00 1.90
314 315 5.104817 CCCACAAAATGAAGAAGGGCATAAT 60.105 40.000 0.00 0.00 0.00 1.28
315 316 4.222588 CCCACAAAATGAAGAAGGGCATAA 59.777 41.667 0.00 0.00 0.00 1.90
316 317 3.768757 CCCACAAAATGAAGAAGGGCATA 59.231 43.478 0.00 0.00 0.00 3.14
317 318 2.568509 CCCACAAAATGAAGAAGGGCAT 59.431 45.455 0.00 0.00 0.00 4.40
318 319 1.969923 CCCACAAAATGAAGAAGGGCA 59.030 47.619 0.00 0.00 0.00 5.36
319 320 1.276138 CCCCACAAAATGAAGAAGGGC 59.724 52.381 0.00 0.00 33.45 5.19
320 321 1.901833 CCCCCACAAAATGAAGAAGGG 59.098 52.381 0.00 0.00 34.58 3.95
321 322 2.827921 CTCCCCCACAAAATGAAGAAGG 59.172 50.000 0.00 0.00 0.00 3.46
322 323 2.827921 CCTCCCCCACAAAATGAAGAAG 59.172 50.000 0.00 0.00 0.00 2.85
323 324 2.492567 CCCTCCCCCACAAAATGAAGAA 60.493 50.000 0.00 0.00 0.00 2.52
324 325 1.077005 CCCTCCCCCACAAAATGAAGA 59.923 52.381 0.00 0.00 0.00 2.87
325 326 1.560505 CCCTCCCCCACAAAATGAAG 58.439 55.000 0.00 0.00 0.00 3.02
326 327 0.116143 CCCCTCCCCCACAAAATGAA 59.884 55.000 0.00 0.00 0.00 2.57
327 328 1.780327 CCCCTCCCCCACAAAATGA 59.220 57.895 0.00 0.00 0.00 2.57
328 329 1.306056 CCCCCTCCCCCACAAAATG 60.306 63.158 0.00 0.00 0.00 2.32
329 330 3.200565 CCCCCTCCCCCACAAAAT 58.799 61.111 0.00 0.00 0.00 1.82
347 348 3.920093 CTTGCTTCGGTGGTCCCCC 62.920 68.421 0.00 0.00 0.00 5.40
348 349 2.359975 CTTGCTTCGGTGGTCCCC 60.360 66.667 0.00 0.00 0.00 4.81
349 350 3.056328 GCTTGCTTCGGTGGTCCC 61.056 66.667 0.00 0.00 0.00 4.46
350 351 3.056328 GGCTTGCTTCGGTGGTCC 61.056 66.667 0.00 0.00 0.00 4.46
351 352 2.032681 AGGCTTGCTTCGGTGGTC 59.967 61.111 0.00 0.00 0.00 4.02
352 353 2.032681 GAGGCTTGCTTCGGTGGT 59.967 61.111 0.00 0.00 0.00 4.16
353 354 1.301677 GAAGAGGCTTGCTTCGGTGG 61.302 60.000 0.75 0.00 33.25 4.61
354 355 1.301677 GGAAGAGGCTTGCTTCGGTG 61.302 60.000 9.16 0.00 42.01 4.94
355 356 1.003233 GGAAGAGGCTTGCTTCGGT 60.003 57.895 9.16 0.00 42.01 4.69
356 357 1.746991 GGGAAGAGGCTTGCTTCGG 60.747 63.158 9.16 0.00 42.01 4.30
357 358 0.537188 TAGGGAAGAGGCTTGCTTCG 59.463 55.000 9.16 0.00 42.01 3.79
358 359 1.279271 TGTAGGGAAGAGGCTTGCTTC 59.721 52.381 7.28 7.28 40.72 3.86
359 360 1.362224 TGTAGGGAAGAGGCTTGCTT 58.638 50.000 0.00 0.00 0.00 3.91
360 361 1.589414 ATGTAGGGAAGAGGCTTGCT 58.411 50.000 0.00 0.00 0.00 3.91
361 362 2.293170 GAATGTAGGGAAGAGGCTTGC 58.707 52.381 0.00 0.00 0.00 4.01
362 363 2.422093 GGGAATGTAGGGAAGAGGCTTG 60.422 54.545 0.00 0.00 0.00 4.01
363 364 1.847088 GGGAATGTAGGGAAGAGGCTT 59.153 52.381 0.00 0.00 0.00 4.35
364 365 1.512735 GGGAATGTAGGGAAGAGGCT 58.487 55.000 0.00 0.00 0.00 4.58
365 366 0.106894 CGGGAATGTAGGGAAGAGGC 59.893 60.000 0.00 0.00 0.00 4.70
366 367 0.106894 GCGGGAATGTAGGGAAGAGG 59.893 60.000 0.00 0.00 0.00 3.69
367 368 0.106894 GGCGGGAATGTAGGGAAGAG 59.893 60.000 0.00 0.00 0.00 2.85
368 369 0.326238 AGGCGGGAATGTAGGGAAGA 60.326 55.000 0.00 0.00 0.00 2.87
369 370 0.106894 GAGGCGGGAATGTAGGGAAG 59.893 60.000 0.00 0.00 0.00 3.46
376 377 0.911769 TTCATGAGAGGCGGGAATGT 59.088 50.000 0.00 0.00 0.00 2.71
403 407 2.283388 CACCAGCCAACCAGCCAT 60.283 61.111 0.00 0.00 0.00 4.40
557 565 0.394565 AGCTATGGGATGAAGACGGC 59.605 55.000 0.00 0.00 0.00 5.68
598 606 6.413052 TCTGAATCTCAAGGAAATCTCCAAG 58.587 40.000 0.00 0.00 45.24 3.61
747 757 0.663867 GACGCATTGTGTTGCATGCA 60.664 50.000 18.46 18.46 42.91 3.96
755 765 0.387622 GCTGCATTGACGCATTGTGT 60.388 50.000 1.73 1.73 42.06 3.72
756 766 0.109458 AGCTGCATTGACGCATTGTG 60.109 50.000 1.02 0.00 42.06 3.33
757 767 0.109458 CAGCTGCATTGACGCATTGT 60.109 50.000 0.00 0.00 42.06 2.71
758 768 0.800683 CCAGCTGCATTGACGCATTG 60.801 55.000 8.66 0.00 42.06 2.82
759 769 1.509463 CCAGCTGCATTGACGCATT 59.491 52.632 8.66 0.00 42.06 3.56
760 770 2.412323 CCCAGCTGCATTGACGCAT 61.412 57.895 8.66 0.00 42.06 4.73
761 771 3.057548 CCCAGCTGCATTGACGCA 61.058 61.111 8.66 0.00 40.32 5.24
762 772 3.818787 CCCCAGCTGCATTGACGC 61.819 66.667 8.66 0.00 0.00 5.19
763 773 1.033746 AATCCCCAGCTGCATTGACG 61.034 55.000 8.66 0.00 0.00 4.35
764 774 1.188863 AAATCCCCAGCTGCATTGAC 58.811 50.000 8.66 0.00 0.00 3.18
765 775 1.551430 CAAAATCCCCAGCTGCATTGA 59.449 47.619 8.66 1.52 0.00 2.57
772 782 1.556451 GGAAATGCAAAATCCCCAGCT 59.444 47.619 0.00 0.00 0.00 4.24
796 815 1.071699 TCCTGGGAAAGTGAGAAACGG 59.928 52.381 0.00 0.00 0.00 4.44
806 825 5.409826 GCGTATTCTTATGATCCTGGGAAAG 59.590 44.000 0.00 0.00 0.00 2.62
807 826 5.305585 GCGTATTCTTATGATCCTGGGAAA 58.694 41.667 0.00 0.00 0.00 3.13
808 827 4.560716 CGCGTATTCTTATGATCCTGGGAA 60.561 45.833 0.00 0.00 0.00 3.97
809 828 3.056821 CGCGTATTCTTATGATCCTGGGA 60.057 47.826 0.00 0.00 0.00 4.37
810 829 3.254060 CGCGTATTCTTATGATCCTGGG 58.746 50.000 0.00 0.00 0.00 4.45
811 830 2.668457 GCGCGTATTCTTATGATCCTGG 59.332 50.000 8.43 0.00 0.00 4.45
812 831 3.579709 AGCGCGTATTCTTATGATCCTG 58.420 45.455 8.43 0.00 0.00 3.86
813 832 3.944055 AGCGCGTATTCTTATGATCCT 57.056 42.857 8.43 0.00 0.00 3.24
828 850 1.209275 CCAGGATTACGAGAAGCGCG 61.209 60.000 0.00 0.00 46.04 6.86
850 872 7.761038 TCTAGCTTCGATAATTATGGTCTCA 57.239 36.000 1.78 0.00 0.00 3.27
854 876 7.604164 CCATGTTCTAGCTTCGATAATTATGGT 59.396 37.037 1.78 0.00 0.00 3.55
866 888 1.480954 TCGACCCCATGTTCTAGCTTC 59.519 52.381 0.00 0.00 0.00 3.86
878 900 3.379445 GAAGGAGCGTCGACCCCA 61.379 66.667 10.58 0.00 0.00 4.96
893 915 0.843309 TCAAGGTGGGCAGAACAGAA 59.157 50.000 0.00 0.00 0.00 3.02
922 944 0.530650 CATGGGATGTAAGCGAGCGT 60.531 55.000 0.00 0.00 0.00 5.07
1047 1071 5.404466 TTCCTGCAAGTTCATTATTTGGG 57.596 39.130 0.00 0.00 0.00 4.12
1048 1072 6.755141 CAGATTCCTGCAAGTTCATTATTTGG 59.245 38.462 0.00 0.00 33.07 3.28
1049 1073 7.541162 TCAGATTCCTGCAAGTTCATTATTTG 58.459 34.615 0.00 0.00 40.20 2.32
1050 1074 7.707624 TCAGATTCCTGCAAGTTCATTATTT 57.292 32.000 0.00 0.00 40.20 1.40
1088 1112 3.816523 GGAAACGGAACTTGGAATGTGTA 59.183 43.478 0.00 0.00 0.00 2.90
1091 1115 2.621526 GTGGAAACGGAACTTGGAATGT 59.378 45.455 0.00 0.00 0.00 2.71
1105 1130 1.002087 AGGAGGATCGTGTGTGGAAAC 59.998 52.381 0.00 0.00 34.37 2.78
1116 1141 2.493675 TGAACAGAACAGAGGAGGATCG 59.506 50.000 0.00 0.00 34.37 3.69
1138 1166 4.504916 CAGGCGCTCCTCCGTGAG 62.505 72.222 7.64 0.00 41.93 3.51
1158 1186 1.757306 CTCTGCACAGGGAACAGGT 59.243 57.895 0.00 0.00 32.19 4.00
1195 1223 0.852777 CGTCGCAGTGCATGTATACC 59.147 55.000 16.83 0.00 0.00 2.73
1669 2327 0.100682 TCGAGTCCTTGCAGCGTATC 59.899 55.000 0.00 0.00 0.00 2.24
2173 2839 2.094700 GGCGAGTGAGACTTGTCATACA 60.095 50.000 3.49 0.00 34.39 2.29
2177 2843 1.112916 TGGGCGAGTGAGACTTGTCA 61.113 55.000 3.49 0.00 35.94 3.58
2223 2889 7.496346 AGACCATGAAATCTTAGTTGGACTA 57.504 36.000 0.00 0.00 29.64 2.59
2617 3285 1.576920 CAAACATGCCCGTGCGTTA 59.423 52.632 0.00 0.00 41.78 3.18
2783 3455 3.256631 ACGTACCGATTGAAACCTAGTGT 59.743 43.478 0.00 0.00 0.00 3.55
2784 3456 3.841643 ACGTACCGATTGAAACCTAGTG 58.158 45.455 0.00 0.00 0.00 2.74
2785 3457 3.426695 CGACGTACCGATTGAAACCTAGT 60.427 47.826 0.00 0.00 0.00 2.57
2923 3602 3.262151 TGAACCCATGAAGTCAATCCGTA 59.738 43.478 0.00 0.00 0.00 4.02
2937 3616 2.706890 GTATTGTGACGGTGAACCCAT 58.293 47.619 0.00 0.00 0.00 4.00
2969 3648 8.871686 AAATTCAAACTGAAAGCGTAAAATCT 57.128 26.923 0.00 0.00 40.12 2.40
3129 3856 4.441634 CCGGTTCGAATCCTTTATGAGAGT 60.442 45.833 0.00 0.00 0.00 3.24
3168 3895 2.128035 CAATCGTACGAAGGCTGGATC 58.872 52.381 23.56 0.00 0.00 3.36
3345 4075 1.594021 CTGCACATATACGGCGGCA 60.594 57.895 13.24 8.28 0.00 5.69
3576 4307 7.497249 CCTTGCTTAGAGTGAGCTAATTAACAT 59.503 37.037 0.00 0.00 40.75 2.71
3578 4309 6.238239 GCCTTGCTTAGAGTGAGCTAATTAAC 60.238 42.308 0.00 0.00 40.75 2.01
3579 4310 5.817816 GCCTTGCTTAGAGTGAGCTAATTAA 59.182 40.000 0.00 0.00 40.75 1.40
3580 4311 5.360591 GCCTTGCTTAGAGTGAGCTAATTA 58.639 41.667 0.00 0.00 40.75 1.40
3581 4312 4.195416 GCCTTGCTTAGAGTGAGCTAATT 58.805 43.478 0.00 0.00 40.75 1.40
3642 4373 2.741092 GTGAAGCCACCGGAGACA 59.259 61.111 9.46 0.00 37.33 3.41
3687 4420 1.363744 GGTGAGCAAACCATCGAGAG 58.636 55.000 3.08 0.00 40.22 3.20
3692 4425 0.244721 GCAAGGGTGAGCAAACCATC 59.755 55.000 9.75 0.00 42.47 3.51
3709 4442 3.256383 CAGGATGAAAACCATGAACTGCA 59.744 43.478 0.00 0.00 39.69 4.41
3970 4706 2.295885 GATTCTACCATTGCTGCAGCT 58.704 47.619 36.61 20.43 42.66 4.24
3974 4710 0.308993 GCGGATTCTACCATTGCTGC 59.691 55.000 0.00 0.00 0.00 5.25
4067 4803 1.594293 CGTTGGAGAGCGTTGGTGT 60.594 57.895 0.00 0.00 0.00 4.16
4634 5762 9.125026 CATACCTTTAAATACCTGAAAGCATCT 57.875 33.333 0.00 0.00 0.00 2.90
4694 5823 8.585018 TCGTGGTATGATATGATAATGAACACT 58.415 33.333 0.00 0.00 0.00 3.55
4719 5848 8.830201 ATCTCATAATACAAATGACTCTGCTC 57.170 34.615 0.00 0.00 30.38 4.26
4916 6185 1.740585 GCGTGTGGCAATGTGGTATAA 59.259 47.619 0.00 0.00 42.87 0.98
4931 6200 1.544691 ACCTCGTTAGATCAAGCGTGT 59.455 47.619 0.00 0.00 0.00 4.49
5197 6748 8.730680 TGGAATTCAGCACTTAGTTCTTATTTC 58.269 33.333 7.93 0.00 0.00 2.17
5198 6749 8.515414 GTGGAATTCAGCACTTAGTTCTTATTT 58.485 33.333 7.93 0.00 0.00 1.40
5199 6750 7.148407 CGTGGAATTCAGCACTTAGTTCTTATT 60.148 37.037 7.93 0.00 0.00 1.40
5205 6756 2.484264 GCGTGGAATTCAGCACTTAGTT 59.516 45.455 7.93 0.00 0.00 2.24
5209 6760 0.250901 AGGCGTGGAATTCAGCACTT 60.251 50.000 17.45 4.43 0.00 3.16
5211 6762 1.237285 ACAGGCGTGGAATTCAGCAC 61.237 55.000 11.67 11.74 0.00 4.40
5213 6764 0.169009 GAACAGGCGTGGAATTCAGC 59.831 55.000 11.67 9.28 0.00 4.26
5237 6788 4.098960 GTCATCAGACGTTTACTCCCCATA 59.901 45.833 0.00 0.00 34.60 2.74
5260 6812 3.443045 GCCTGCAACCATGGACGG 61.443 66.667 21.47 12.10 0.00 4.79
5318 6870 0.037590 CTTGAAATCCCCCGTCACCA 59.962 55.000 0.00 0.00 0.00 4.17
5409 6961 4.235372 TCTCTTCCTCCTGGTTTTCTTCT 58.765 43.478 0.00 0.00 34.23 2.85
5526 7081 4.770362 TGGAGGTCCCATCGCGGA 62.770 66.667 6.13 0.00 40.82 5.54
5573 7128 4.082679 GCGTTACTCCCTACATGATCCTAG 60.083 50.000 0.00 0.00 0.00 3.02
5629 7184 6.567602 AGTTAGCAGAACCAAGGAAGATAT 57.432 37.500 0.00 0.00 0.00 1.63
5631 7186 4.917906 AGTTAGCAGAACCAAGGAAGAT 57.082 40.909 0.00 0.00 0.00 2.40
5633 7188 5.305585 TGTAAGTTAGCAGAACCAAGGAAG 58.694 41.667 0.00 0.00 0.00 3.46
5646 7201 7.098074 AGTACATCACTACCTGTAAGTTAGC 57.902 40.000 0.00 0.00 34.98 3.09
5651 7206 9.128404 TGGTTATAGTACATCACTACCTGTAAG 57.872 37.037 0.00 0.00 42.56 2.34
5682 7237 9.624373 CTGAGCTAATAGGCCAATTTGATATAT 57.376 33.333 5.01 0.00 0.00 0.86
5804 7359 6.756074 TGCAAAAAGAGTAAATGTCAGTTTGG 59.244 34.615 0.00 0.00 0.00 3.28
5805 7360 7.513505 CGTGCAAAAAGAGTAAATGTCAGTTTG 60.514 37.037 0.00 0.00 0.00 2.93
5822 7377 2.570415 TGGATAGACCCGTGCAAAAA 57.430 45.000 0.00 0.00 38.00 1.94
5834 7389 6.499106 TTTACCAGCAGATTCATGGATAGA 57.501 37.500 8.94 0.00 37.54 1.98
5837 7392 8.537728 TTTATTTTACCAGCAGATTCATGGAT 57.462 30.769 8.94 0.00 37.54 3.41
5890 7622 2.262572 GCACCAGGCGAAAAGTAATG 57.737 50.000 0.00 0.00 0.00 1.90
5937 7669 1.229975 GCCCAACATTTTGCACCAGC 61.230 55.000 0.00 0.00 42.57 4.85
5948 7680 1.075601 TTCCAAGAGGAGCCCAACAT 58.924 50.000 0.00 0.00 46.74 2.71
5958 7690 4.148838 TGGGTTGTGTTTATTCCAAGAGG 58.851 43.478 0.00 0.00 0.00 3.69
5977 7709 5.234466 TGGGAAATACCATTTGTTTTGGG 57.766 39.130 0.00 0.00 41.20 4.12
6046 7801 6.210584 TGGAGACACCTTCAGTTTTTCTTTTT 59.789 34.615 0.00 0.00 39.86 1.94
6047 7802 5.714806 TGGAGACACCTTCAGTTTTTCTTTT 59.285 36.000 0.00 0.00 39.86 2.27
6148 7915 6.980593 TGGTCTTTATTTTCATGGTGTTCAG 58.019 36.000 0.00 0.00 0.00 3.02
6149 7916 6.968263 TGGTCTTTATTTTCATGGTGTTCA 57.032 33.333 0.00 0.00 0.00 3.18
6150 7917 8.655651 TTTTGGTCTTTATTTTCATGGTGTTC 57.344 30.769 0.00 0.00 0.00 3.18
6151 7918 8.264347 ACTTTTGGTCTTTATTTTCATGGTGTT 58.736 29.630 0.00 0.00 0.00 3.32
6152 7919 7.791029 ACTTTTGGTCTTTATTTTCATGGTGT 58.209 30.769 0.00 0.00 0.00 4.16
6153 7920 9.757227 TTACTTTTGGTCTTTATTTTCATGGTG 57.243 29.630 0.00 0.00 0.00 4.17
6158 7925 9.877178 TTGCTTTACTTTTGGTCTTTATTTTCA 57.123 25.926 0.00 0.00 0.00 2.69
6171 7938 6.205464 TGGAGACAGATCTTGCTTTACTTTTG 59.795 38.462 0.00 0.00 34.34 2.44
6225 7999 4.994217 TGCAGTTTGATTCACAGTATCGAA 59.006 37.500 0.00 0.00 0.00 3.71
6459 8244 2.268298 CCGAGCAACGTTAGCTGTAAT 58.732 47.619 23.61 5.78 43.58 1.89
6460 8245 1.000060 ACCGAGCAACGTTAGCTGTAA 60.000 47.619 23.61 0.00 43.58 2.41
6471 8256 2.279918 ACACCGTCACCGAGCAAC 60.280 61.111 0.00 0.00 35.63 4.17
6477 8262 1.297664 TTTTTACCACACCGTCACCG 58.702 50.000 0.00 0.00 0.00 4.94
6478 8263 2.619646 ACATTTTTACCACACCGTCACC 59.380 45.455 0.00 0.00 0.00 4.02
6479 8264 3.605231 CGACATTTTTACCACACCGTCAC 60.605 47.826 0.00 0.00 0.00 3.67
6480 8265 2.544686 CGACATTTTTACCACACCGTCA 59.455 45.455 0.00 0.00 0.00 4.35
6481 8266 2.545106 ACGACATTTTTACCACACCGTC 59.455 45.455 0.00 0.00 0.00 4.79
6482 8267 2.545106 GACGACATTTTTACCACACCGT 59.455 45.455 0.00 0.00 0.00 4.83
6558 8343 4.554363 ATTCTCGAGCCGCGACCG 62.554 66.667 8.23 8.15 45.59 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.