AutoCloner

Multiple sequence alignment - TraesCS2A01G355300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G355300	chr2A	100.000	5143	0	0	1	5143	598151818	598156960	0.000000e+00	9498.0
1	TraesCS2A01G355300	chr2A	89.394	66	7	0	4073	4138	625017542	625017607	3.300000e-12	84.2
2	TraesCS2A01G355300	chr2D	91.276	3668	170	42	1414	5029	451297346	451293777	0.000000e+00	4863.0
3	TraesCS2A01G355300	chr2D	91.558	841	62	9	539	1374	451298171	451297335	0.000000e+00	1151.0
4	TraesCS2A01G355300	chr2D	95.876	97	3	1	5028	5124	451293695	451293600	6.890000e-34	156.0
5	TraesCS2A01G355300	chr2B	91.087	2401	130	30	676	3020	531552792	531550420	0.000000e+00	3171.0
6	TraesCS2A01G355300	chr2B	90.529	1077	67	21	3104	4167	531550564	531549510	0.000000e+00	1391.0
7	TraesCS2A01G355300	chr2B	85.897	234	13	5	4469	4698	531549183	531548966	1.110000e-56	231.0
8	TraesCS2A01G355300	chr2B	90.769	65	4	2	4722	4786	531548965	531548903	9.180000e-13	86.1
9	TraesCS2A01G355300	chr7D	76.933	789	103	38	743	1514	333752512	333753238	4.860000e-100	375.0
10	TraesCS2A01G355300	chr5A	82.659	173	25	5	3974	4143	670013631	670013461	1.150000e-31	148.0
11	TraesCS2A01G355300	chr5A	89.394	66	7	0	4073	4138	540726401	540726466	3.300000e-12	84.2

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G355300	chr2A	598151818	598156960	5142	False	9498.000000	9498	100.000000	1	5143	1	chr2A.!!$F1	5142
1	TraesCS2A01G355300	chr2D	451293600	451298171	4571	True	2056.666667	4863	92.903333	539	5124	3	chr2D.!!$R1	4585
2	TraesCS2A01G355300	chr2B	531548903	531552792	3889	True	1219.775000	3171	89.570500	676	4786	4	chr2B.!!$R1	4110
3	TraesCS2A01G355300	chr7D	333752512	333753238	726	False	375.000000	375	76.933000	743	1514	1	chr7D.!!$F1	771

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
363	364	0.030101	CTTTTGCCGAAGCCGTTGAA	59.970	50.0	0.0	38.69	2.69	F
442	443	0.109597	GACGCTTTCATTGGCTGGTG	60.110	55.0	0.0	0.00	4.17	F
445	446	0.248289	GCTTTCATTGGCTGGTGCAT	59.752	50.0	0.0	41.91	3.96	F
1534	1567	0.250513	GAAACCATCTGCTCCTCCGT	59.749	55.0	0.0	0.00	4.69	F
2750	2844	0.544357	TGGATCGAGTGGTCCTGGTT	60.544	55.0	4.5	35.49	3.67	F

Position	MSA Position	Penalty	Sequence	TM	GC	Hairpin	End Stability	Orientation
2302	2393	0.321346	TCATGGTGCATCTGTCGTGT	59.679	50.0	0.00	4.49	R
2304	2395	0.610174	ACTCATGGTGCATCTGTCGT	59.390	50.0	0.00	4.34	R
2305	2396	1.730501	AACTCATGGTGCATCTGTCG	58.269	50.0	0.00	4.35	R
2785	2879	0.107703	TTCATTAGCCAGACCCGCTG	60.108	55.0	44.49	5.18	R
4226	4346	0.169230	AGCTCTCGCTACTCAACACG	59.831	55.0	46.79	4.49	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
24	25	3.188786	GTGATGCACGTCGAGGCC	61.189	66.667	4.75	0.00	0.00	5.19
25	26	3.690280	TGATGCACGTCGAGGCCA	61.690	61.111	5.01	3.29	0.00	5.36
26	27	2.202932	GATGCACGTCGAGGCCAT	60.203	61.111	5.01	8.19	0.00	4.40
27	28	2.512286	ATGCACGTCGAGGCCATG	60.512	61.111	5.01	0.00	0.00	3.66
28	29	3.315142	ATGCACGTCGAGGCCATGT	62.315	57.895	5.01	0.00	0.00	3.21
29	30	2.742372	GCACGTCGAGGCCATGTT	60.742	61.111	5.01	0.00	0.00	2.71
30	31	3.027170	GCACGTCGAGGCCATGTTG	62.027	63.158	5.01	0.00	0.00	3.33
31	32	2.742372	ACGTCGAGGCCATGTTGC	60.742	61.111	5.01	0.00	0.00	4.17
32	33	2.434884	CGTCGAGGCCATGTTGCT	60.435	61.111	5.01	0.00	0.00	3.91
33	34	2.456119	CGTCGAGGCCATGTTGCTC	61.456	63.158	5.01	0.00	0.00	4.26
34	35	2.109126	GTCGAGGCCATGTTGCTCC	61.109	63.158	5.01	0.00	0.00	4.70
35	36	2.270205	CGAGGCCATGTTGCTCCT	59.730	61.111	5.01	0.00	0.00	3.69
36	37	1.377725	CGAGGCCATGTTGCTCCTT	60.378	57.895	5.01	0.00	0.00	3.36
37	38	1.651240	CGAGGCCATGTTGCTCCTTG	61.651	60.000	5.01	0.00	0.00	3.61
38	39	0.610232	GAGGCCATGTTGCTCCTTGT	60.610	55.000	5.01	0.00	0.00	3.16
39	40	0.178953	AGGCCATGTTGCTCCTTGTT	60.179	50.000	5.01	0.00	0.00	2.83
40	41	0.244721	GGCCATGTTGCTCCTTGTTC	59.755	55.000	0.00	0.00	0.00	3.18
41	42	1.251251	GCCATGTTGCTCCTTGTTCT	58.749	50.000	0.00	0.00	0.00	3.01
42	43	1.200948	GCCATGTTGCTCCTTGTTCTC	59.799	52.381	0.00	0.00	0.00	2.87
43	44	1.466167	CCATGTTGCTCCTTGTTCTCG	59.534	52.381	0.00	0.00	0.00	4.04
44	45	2.416747	CATGTTGCTCCTTGTTCTCGA	58.583	47.619	0.00	0.00	0.00	4.04
45	46	2.154854	TGTTGCTCCTTGTTCTCGAG	57.845	50.000	5.93	5.93	0.00	4.04
46	47	1.270305	TGTTGCTCCTTGTTCTCGAGG	60.270	52.381	13.56	0.00	44.55	4.63
47	48	0.321671	TTGCTCCTTGTTCTCGAGGG	59.678	55.000	13.56	5.40	43.63	4.30
48	49	1.448717	GCTCCTTGTTCTCGAGGGC	60.449	63.158	13.56	6.40	43.63	5.19
49	50	1.975327	CTCCTTGTTCTCGAGGGCA	59.025	57.895	13.56	9.11	43.63	5.36
50	51	0.321671	CTCCTTGTTCTCGAGGGCAA	59.678	55.000	13.56	15.87	43.63	4.52
51	52	0.762418	TCCTTGTTCTCGAGGGCAAA	59.238	50.000	13.56	0.00	43.63	3.68
52	53	0.875059	CCTTGTTCTCGAGGGCAAAC	59.125	55.000	13.56	10.06	40.63	2.93
53	54	0.875059	CTTGTTCTCGAGGGCAAACC	59.125	55.000	13.56	0.00	40.67	3.27
63	64	3.961414	GGCAAACCCGACCTCCCA	61.961	66.667	0.00	0.00	0.00	4.37
64	65	2.114411	GCAAACCCGACCTCCCAA	59.886	61.111	0.00	0.00	0.00	4.12
65	66	1.304134	GCAAACCCGACCTCCCAAT	60.304	57.895	0.00	0.00	0.00	3.16
66	67	1.595093	GCAAACCCGACCTCCCAATG	61.595	60.000	0.00	0.00	0.00	2.82
67	68	0.965363	CAAACCCGACCTCCCAATGG	60.965	60.000	0.00	0.00	0.00	3.16
68	69	2.150014	AAACCCGACCTCCCAATGGG	62.150	60.000	13.28	13.28	46.11	4.00
79	80	3.181526	CCAATGGGAAGAGTCTGGC	57.818	57.895	0.00	0.00	35.59	4.85
80	81	0.745845	CCAATGGGAAGAGTCTGGCG	60.746	60.000	0.00	0.00	35.59	5.69
81	82	1.078143	AATGGGAAGAGTCTGGCGC	60.078	57.895	0.00	0.00	0.00	6.53
82	83	2.859273	AATGGGAAGAGTCTGGCGCG	62.859	60.000	0.00	0.00	0.00	6.86
83	84	4.070552	GGGAAGAGTCTGGCGCGT	62.071	66.667	8.43	0.00	0.00	6.01
84	85	2.707849	GGGAAGAGTCTGGCGCGTA	61.708	63.158	8.43	0.00	0.00	4.42
85	86	1.516603	GGAAGAGTCTGGCGCGTAC	60.517	63.158	8.43	1.23	0.00	3.67
86	87	1.507174	GAAGAGTCTGGCGCGTACT	59.493	57.895	8.43	4.22	0.00	2.73
87	88	0.523757	GAAGAGTCTGGCGCGTACTC	60.524	60.000	21.16	21.16	39.95	2.59
88	89	1.935327	AAGAGTCTGGCGCGTACTCC	61.935	60.000	23.57	10.55	40.42	3.85
89	90	3.736482	GAGTCTGGCGCGTACTCCG	62.736	68.421	19.14	0.00	34.79	4.63
90	91	4.849329	GTCTGGCGCGTACTCCGG	62.849	72.222	8.43	5.35	36.94	5.14
95	96	4.865761	GCGCGTACTCCGGCATCA	62.866	66.667	8.43	0.00	36.94	3.07
96	97	2.655364	CGCGTACTCCGGCATCAG	60.655	66.667	0.00	0.00	36.94	2.90
97	98	2.494918	GCGTACTCCGGCATCAGT	59.505	61.111	0.00	0.00	36.94	3.41
98	99	1.589196	GCGTACTCCGGCATCAGTC	60.589	63.158	0.00	0.00	36.94	3.51
99	100	1.298413	CGTACTCCGGCATCAGTCG	60.298	63.158	0.00	0.00	43.89	4.18
100	101	1.589196	GTACTCCGGCATCAGTCGC	60.589	63.158	0.00	0.00	42.67	5.19
101	102	1.753078	TACTCCGGCATCAGTCGCT	60.753	57.895	0.00	0.00	42.67	4.93
102	103	2.004808	TACTCCGGCATCAGTCGCTG	62.005	60.000	0.00	1.02	42.67	5.18
103	104	4.819761	TCCGGCATCAGTCGCTGC	62.820	66.667	0.00	0.00	42.67	5.25
104	105	4.827087	CCGGCATCAGTCGCTGCT	62.827	66.667	0.00	0.00	42.67	4.24
105	106	2.816958	CGGCATCAGTCGCTGCTT	60.817	61.111	0.00	0.00	35.35	3.91
106	107	2.806856	CGGCATCAGTCGCTGCTTC	61.807	63.158	0.00	0.00	35.35	3.86
107	108	2.699809	GCATCAGTCGCTGCTTCG	59.300	61.111	0.00	0.00	35.49	3.79
108	109	2.806856	GCATCAGTCGCTGCTTCGG	61.807	63.158	0.00	0.00	35.49	4.30
109	110	2.510238	ATCAGTCGCTGCTTCGGC	60.510	61.111	0.00	0.00	42.19	5.54
127	128	3.712881	GTGAGCAACGACCGGCAC	61.713	66.667	0.00	0.00	0.00	5.01
128	129	3.923864	TGAGCAACGACCGGCACT	61.924	61.111	0.00	0.00	0.00	4.40
129	130	2.665185	GAGCAACGACCGGCACTT	60.665	61.111	0.00	0.00	0.00	3.16
130	131	1.373748	GAGCAACGACCGGCACTTA	60.374	57.895	0.00	0.00	0.00	2.24
131	132	1.623973	GAGCAACGACCGGCACTTAC	61.624	60.000	0.00	0.00	0.00	2.34
132	133	3.007070	GCAACGACCGGCACTTACG	62.007	63.158	0.00	0.45	0.00	3.18
133	134	2.735857	AACGACCGGCACTTACGC	60.736	61.111	0.00	0.00	0.00	4.42
134	135	3.502990	AACGACCGGCACTTACGCA	62.503	57.895	0.00	0.00	0.00	5.24
135	136	2.508439	CGACCGGCACTTACGCAT	60.508	61.111	0.00	0.00	0.00	4.73
136	137	2.514013	CGACCGGCACTTACGCATC	61.514	63.158	0.00	0.00	0.00	3.91
137	138	1.153628	GACCGGCACTTACGCATCT	60.154	57.895	0.00	0.00	0.00	2.90
138	139	1.146358	GACCGGCACTTACGCATCTC	61.146	60.000	0.00	0.00	0.00	2.75
139	140	1.883084	CCGGCACTTACGCATCTCC	60.883	63.158	0.00	0.00	0.00	3.71
140	141	1.141881	CGGCACTTACGCATCTCCT	59.858	57.895	0.00	0.00	0.00	3.69
141	142	0.872021	CGGCACTTACGCATCTCCTC	60.872	60.000	0.00	0.00	0.00	3.71
142	143	0.872021	GGCACTTACGCATCTCCTCG	60.872	60.000	0.00	0.00	0.00	4.63
143	144	0.872021	GCACTTACGCATCTCCTCGG	60.872	60.000	0.00	0.00	0.00	4.63
144	145	0.872021	CACTTACGCATCTCCTCGGC	60.872	60.000	0.00	0.00	0.00	5.54
150	151	4.498520	CATCTCCTCGGCGTGCGT	62.499	66.667	6.85	0.00	0.00	5.24
151	152	4.194720	ATCTCCTCGGCGTGCGTC	62.195	66.667	6.85	0.00	0.00	5.19
167	168	4.259952	TCCACTGCGGATCGAGAT	57.740	55.556	0.00	0.00	39.64	2.75
168	169	1.735973	TCCACTGCGGATCGAGATG	59.264	57.895	0.00	0.00	39.64	2.90
169	170	1.953138	CCACTGCGGATCGAGATGC	60.953	63.158	0.00	0.00	36.56	3.91
170	171	1.953138	CACTGCGGATCGAGATGCC	60.953	63.158	0.00	0.00	0.00	4.40
171	172	2.418777	CTGCGGATCGAGATGCCA	59.581	61.111	0.00	0.00	0.00	4.92
172	173	1.227350	CTGCGGATCGAGATGCCAA	60.227	57.895	0.00	0.00	0.00	4.52
173	174	0.602106	CTGCGGATCGAGATGCCAAT	60.602	55.000	0.00	0.00	0.00	3.16
174	175	0.601046	TGCGGATCGAGATGCCAATC	60.601	55.000	0.00	0.00	0.00	2.67
175	176	1.621301	GCGGATCGAGATGCCAATCG	61.621	60.000	0.00	0.00	37.92	3.34
176	177	1.621301	CGGATCGAGATGCCAATCGC	61.621	60.000	0.00	0.00	38.79	4.58
179	180	4.345547	CGAGATGCCAATCGCGCG	62.346	66.667	26.76	26.76	46.56	6.86
180	181	4.005472	GAGATGCCAATCGCGCGG	62.005	66.667	31.69	15.17	42.08	6.46
186	187	4.178214	CCAATCGCGCGGCAACAT	62.178	61.111	31.69	13.08	0.00	2.71
187	188	2.648724	CAATCGCGCGGCAACATC	60.649	61.111	31.69	0.00	0.00	3.06
188	189	3.124270	AATCGCGCGGCAACATCA	61.124	55.556	31.69	8.20	0.00	3.07
189	190	2.472059	AATCGCGCGGCAACATCAT	61.472	52.632	31.69	10.55	0.00	2.45
190	191	2.651367	AATCGCGCGGCAACATCATG	62.651	55.000	31.69	0.00	0.00	3.07
191	192	4.164664	CGCGCGGCAACATCATGT	62.165	61.111	24.84	0.00	0.00	3.21
192	193	2.277501	GCGCGGCAACATCATGTC	60.278	61.111	8.83	0.00	0.00	3.06
193	194	2.404789	CGCGGCAACATCATGTCC	59.595	61.111	0.00	0.00	0.00	4.02
194	195	2.404789	GCGGCAACATCATGTCCG	59.595	61.111	12.55	12.55	40.53	4.79
195	196	3.101209	CGGCAACATCATGTCCGG	58.899	61.111	9.59	0.00	36.78	5.14
196	197	2.472059	CGGCAACATCATGTCCGGG	61.472	63.158	9.59	0.00	36.78	5.73
197	198	1.378514	GGCAACATCATGTCCGGGT	60.379	57.895	0.00	0.00	0.00	5.28
198	199	0.107410	GGCAACATCATGTCCGGGTA	60.107	55.000	0.00	0.00	0.00	3.69
199	200	1.014352	GCAACATCATGTCCGGGTAC	58.986	55.000	0.00	0.00	0.00	3.34
200	201	1.286501	CAACATCATGTCCGGGTACG	58.713	55.000	0.00	0.00	40.55	3.67
201	202	1.134936	CAACATCATGTCCGGGTACGA	60.135	52.381	0.00	0.00	44.60	3.43
202	203	0.458669	ACATCATGTCCGGGTACGAC	59.541	55.000	0.00	0.00	44.60	4.34
203	204	0.458260	CATCATGTCCGGGTACGACA	59.542	55.000	0.00	0.00	44.60	4.35
204	205	1.134936	CATCATGTCCGGGTACGACAA	60.135	52.381	0.00	0.00	44.60	3.18
205	206	0.244450	TCATGTCCGGGTACGACAAC	59.756	55.000	0.00	0.00	44.60	3.32
206	207	0.245539	CATGTCCGGGTACGACAACT	59.754	55.000	0.00	0.00	44.60	3.16
207	208	1.473677	CATGTCCGGGTACGACAACTA	59.526	52.381	0.00	0.00	44.60	2.24
208	209	0.881118	TGTCCGGGTACGACAACTAC	59.119	55.000	0.00	0.00	44.60	2.73
209	210	1.168714	GTCCGGGTACGACAACTACT	58.831	55.000	0.00	0.00	44.60	2.57
210	211	2.290008	TGTCCGGGTACGACAACTACTA	60.290	50.000	0.00	0.00	44.60	1.82
211	212	2.096013	GTCCGGGTACGACAACTACTAC	59.904	54.545	0.00	0.00	44.60	2.73
212	213	1.401905	CCGGGTACGACAACTACTACC	59.598	57.143	0.00	0.00	44.60	3.18
213	214	2.359900	CGGGTACGACAACTACTACCT	58.640	52.381	0.00	0.00	44.60	3.08
214	215	2.096496	CGGGTACGACAACTACTACCTG	59.904	54.545	0.00	0.00	44.60	4.00
215	216	3.347216	GGGTACGACAACTACTACCTGA	58.653	50.000	0.00	0.00	30.98	3.86
216	217	3.758554	GGGTACGACAACTACTACCTGAA	59.241	47.826	0.00	0.00	30.98	3.02
217	218	4.379918	GGGTACGACAACTACTACCTGAAC	60.380	50.000	0.00	0.00	30.98	3.18
218	219	4.457257	GGTACGACAACTACTACCTGAACT	59.543	45.833	0.00	0.00	0.00	3.01
219	220	5.048434	GGTACGACAACTACTACCTGAACTT	60.048	44.000	0.00	0.00	0.00	2.66
220	221	5.118642	ACGACAACTACTACCTGAACTTC	57.881	43.478	0.00	0.00	0.00	3.01
221	222	4.022503	ACGACAACTACTACCTGAACTTCC	60.023	45.833	0.00	0.00	0.00	3.46
222	223	4.022589	CGACAACTACTACCTGAACTTCCA	60.023	45.833	0.00	0.00	0.00	3.53
223	224	5.336531	CGACAACTACTACCTGAACTTCCAT	60.337	44.000	0.00	0.00	0.00	3.41
224	225	6.435292	ACAACTACTACCTGAACTTCCATT	57.565	37.500	0.00	0.00	0.00	3.16
225	226	6.231211	ACAACTACTACCTGAACTTCCATTG	58.769	40.000	0.00	0.00	0.00	2.82
226	227	4.833390	ACTACTACCTGAACTTCCATTGC	58.167	43.478	0.00	0.00	0.00	3.56
227	228	3.073274	ACTACCTGAACTTCCATTGCC	57.927	47.619	0.00	0.00	0.00	4.52
228	229	2.375174	ACTACCTGAACTTCCATTGCCA	59.625	45.455	0.00	0.00	0.00	4.92
229	230	2.610438	ACCTGAACTTCCATTGCCAT	57.390	45.000	0.00	0.00	0.00	4.40
230	231	2.450476	ACCTGAACTTCCATTGCCATC	58.550	47.619	0.00	0.00	0.00	3.51
231	232	1.402968	CCTGAACTTCCATTGCCATCG	59.597	52.381	0.00	0.00	0.00	3.84
232	233	2.086869	CTGAACTTCCATTGCCATCGT	58.913	47.619	0.00	0.00	0.00	3.73
233	234	1.811965	TGAACTTCCATTGCCATCGTG	59.188	47.619	0.00	0.00	0.00	4.35
234	235	0.527565	AACTTCCATTGCCATCGTGC	59.472	50.000	0.00	0.00	0.00	5.34
235	236	0.322816	ACTTCCATTGCCATCGTGCT	60.323	50.000	0.00	0.00	0.00	4.40
236	237	0.813184	CTTCCATTGCCATCGTGCTT	59.187	50.000	0.00	0.00	0.00	3.91
237	238	0.527113	TTCCATTGCCATCGTGCTTG	59.473	50.000	0.00	0.00	0.00	4.01
238	239	1.140161	CCATTGCCATCGTGCTTGG	59.860	57.895	0.00	0.00	37.31	3.61
239	240	1.597797	CCATTGCCATCGTGCTTGGT	61.598	55.000	0.00	0.00	36.57	3.67
240	241	0.457166	CATTGCCATCGTGCTTGGTG	60.457	55.000	0.00	0.00	36.57	4.17
241	242	2.216750	ATTGCCATCGTGCTTGGTGC	62.217	55.000	0.00	0.00	43.25	5.01
254	255	3.587923	GCTTGGTGCATAGAAATTTGCA	58.412	40.909	0.00	0.00	46.03	4.08
259	260	3.135414	TGCATAGAAATTTGCAGTCGC	57.865	42.857	0.00	0.00	43.54	5.19
260	261	2.749076	TGCATAGAAATTTGCAGTCGCT	59.251	40.909	0.00	0.00	43.54	4.93
261	262	3.103738	GCATAGAAATTTGCAGTCGCTG	58.896	45.455	0.00	2.92	38.72	5.18
270	271	2.505777	CAGTCGCTGCCTCACGAG	60.506	66.667	0.00	0.00	39.30	4.18
279	280	3.114616	CCTCACGAGGCAAGCACG	61.115	66.667	0.00	8.73	42.44	5.34
280	281	3.782244	CTCACGAGGCAAGCACGC	61.782	66.667	9.86	0.00	0.00	5.34
284	285	3.109547	CGAGGCAAGCACGCGTTA	61.110	61.111	10.22	0.00	0.00	3.18
285	286	2.778679	GAGGCAAGCACGCGTTAG	59.221	61.111	10.22	0.00	0.00	2.34
286	287	3.368455	GAGGCAAGCACGCGTTAGC	62.368	63.158	10.22	12.04	40.74	3.09
299	300	2.927437	GTTAGCGACGACGAAGGAG	58.073	57.895	12.29	0.00	42.66	3.69
300	301	0.522915	GTTAGCGACGACGAAGGAGG	60.523	60.000	12.29	0.00	42.66	4.30
301	302	0.674581	TTAGCGACGACGAAGGAGGA	60.675	55.000	12.29	0.00	42.66	3.71
302	303	0.674581	TAGCGACGACGAAGGAGGAA	60.675	55.000	12.29	0.00	42.66	3.36
303	304	1.514443	GCGACGACGAAGGAGGAAG	60.514	63.158	12.29	0.00	42.66	3.46
304	305	1.919956	GCGACGACGAAGGAGGAAGA	61.920	60.000	12.29	0.00	42.66	2.87
305	306	0.097325	CGACGACGAAGGAGGAAGAG	59.903	60.000	0.00	0.00	42.66	2.85
306	307	0.179158	GACGACGAAGGAGGAAGAGC	60.179	60.000	0.00	0.00	0.00	4.09
307	308	1.226435	CGACGAAGGAGGAAGAGCG	60.226	63.158	0.00	0.00	0.00	5.03
308	309	1.517475	GACGAAGGAGGAAGAGCGC	60.517	63.158	0.00	0.00	0.00	5.92
309	310	2.580867	CGAAGGAGGAAGAGCGCG	60.581	66.667	0.00	0.00	0.00	6.86
310	311	2.202810	GAAGGAGGAAGAGCGCGG	60.203	66.667	8.83	0.00	0.00	6.46
311	312	3.724914	GAAGGAGGAAGAGCGCGGG	62.725	68.421	8.83	0.00	0.00	6.13
312	313	4.761058	AGGAGGAAGAGCGCGGGA	62.761	66.667	8.83	0.00	0.00	5.14
313	314	4.214327	GGAGGAAGAGCGCGGGAG	62.214	72.222	8.83	0.00	0.00	4.30
314	315	4.214327	GAGGAAGAGCGCGGGAGG	62.214	72.222	8.83	0.00	0.00	4.30
315	316	4.761058	AGGAAGAGCGCGGGAGGA	62.761	66.667	8.83	0.00	0.00	3.71
316	317	4.516195	GGAAGAGCGCGGGAGGAC	62.516	72.222	8.83	0.00	0.00	3.85
317	318	4.856607	GAAGAGCGCGGGAGGACG	62.857	72.222	8.83	0.00	0.00	4.79
320	321	4.856607	GAGCGCGGGAGGACGAAG	62.857	72.222	8.83	0.00	35.47	3.79
334	335	3.733960	GAAGCGTCGGGGGCAAAC	61.734	66.667	0.00	0.00	0.00	2.93
335	336	4.265056	AAGCGTCGGGGGCAAACT	62.265	61.111	0.00	0.00	0.00	2.66
336	337	3.785122	AAGCGTCGGGGGCAAACTT	62.785	57.895	0.00	0.00	0.00	2.66
337	338	3.733960	GCGTCGGGGGCAAACTTC	61.734	66.667	0.00	0.00	0.00	3.01
338	339	3.053896	CGTCGGGGGCAAACTTCC	61.054	66.667	0.00	0.00	0.00	3.46
339	340	2.675423	GTCGGGGGCAAACTTCCC	60.675	66.667	0.00	0.00	43.15	3.97
344	345	3.059982	GGGCAAACTTCCCCTTGC	58.940	61.111	0.00	0.00	45.79	4.01
345	346	1.533994	GGGCAAACTTCCCCTTGCT	60.534	57.895	6.73	0.00	45.79	3.91
346	347	1.121407	GGGCAAACTTCCCCTTGCTT	61.121	55.000	6.73	0.00	45.79	3.91
347	348	0.758734	GGCAAACTTCCCCTTGCTTT	59.241	50.000	6.73	0.00	45.79	3.51
348	349	1.140852	GGCAAACTTCCCCTTGCTTTT	59.859	47.619	6.73	0.00	45.79	2.27
349	350	2.212652	GCAAACTTCCCCTTGCTTTTG	58.787	47.619	0.00	0.00	43.68	2.44
350	351	3.634502	GCAAACTTCCCCTTGCTTTTGC	61.635	50.000	0.00	0.00	43.68	3.68
351	352	0.758734	AACTTCCCCTTGCTTTTGCC	59.241	50.000	0.00	0.00	46.87	4.52
352	353	1.290009	CTTCCCCTTGCTTTTGCCG	59.710	57.895	0.00	0.00	46.87	5.69
353	354	1.152652	TTCCCCTTGCTTTTGCCGA	60.153	52.632	0.00	0.00	46.87	5.54
354	355	0.757188	TTCCCCTTGCTTTTGCCGAA	60.757	50.000	0.00	0.00	46.87	4.30
355	356	1.178534	TCCCCTTGCTTTTGCCGAAG	61.179	55.000	0.00	0.00	46.87	3.79
360	361	2.335011	GCTTTTGCCGAAGCCGTT	59.665	55.556	9.36	0.00	44.85	4.44
361	362	2.016165	GCTTTTGCCGAAGCCGTTG	61.016	57.895	9.36	0.00	44.85	4.10
362	363	1.652012	CTTTTGCCGAAGCCGTTGA	59.348	52.632	0.00	0.00	38.69	3.18
363	364	0.030101	CTTTTGCCGAAGCCGTTGAA	59.970	50.000	0.00	0.00	38.69	2.69
364	365	0.030101	TTTTGCCGAAGCCGTTGAAG	59.970	50.000	0.00	0.00	38.69	3.02
365	366	0.816018	TTTGCCGAAGCCGTTGAAGA	60.816	50.000	0.00	0.00	38.69	2.87
366	367	0.816018	TTGCCGAAGCCGTTGAAGAA	60.816	50.000	0.00	0.00	38.69	2.52
367	368	0.816018	TGCCGAAGCCGTTGAAGAAA	60.816	50.000	0.00	0.00	38.69	2.52
368	369	0.385598	GCCGAAGCCGTTGAAGAAAC	60.386	55.000	0.00	0.00	35.25	2.78
369	370	0.237498	CCGAAGCCGTTGAAGAAACC	59.763	55.000	0.00	0.00	35.13	3.27
370	371	0.237498	CGAAGCCGTTGAAGAAACCC	59.763	55.000	0.00	0.00	35.13	4.11
371	372	1.314730	GAAGCCGTTGAAGAAACCCA	58.685	50.000	0.00	0.00	35.13	4.51
372	373	1.886542	GAAGCCGTTGAAGAAACCCAT	59.113	47.619	0.00	0.00	35.13	4.00
373	374	1.995376	AGCCGTTGAAGAAACCCATT	58.005	45.000	0.00	0.00	35.13	3.16
374	375	1.613437	AGCCGTTGAAGAAACCCATTG	59.387	47.619	0.00	0.00	35.13	2.82
375	376	1.934849	GCCGTTGAAGAAACCCATTGC	60.935	52.381	0.00	0.00	35.13	3.56
376	377	1.613437	CCGTTGAAGAAACCCATTGCT	59.387	47.619	0.00	0.00	35.13	3.91
377	378	2.817258	CCGTTGAAGAAACCCATTGCTA	59.183	45.455	0.00	0.00	35.13	3.49
378	379	3.119849	CCGTTGAAGAAACCCATTGCTAG	60.120	47.826	0.00	0.00	35.13	3.42
379	380	3.751175	CGTTGAAGAAACCCATTGCTAGA	59.249	43.478	0.00	0.00	35.13	2.43
380	381	4.142816	CGTTGAAGAAACCCATTGCTAGAG	60.143	45.833	0.00	0.00	35.13	2.43
381	382	4.640771	TGAAGAAACCCATTGCTAGAGT	57.359	40.909	0.00	0.00	0.00	3.24
382	383	4.985538	TGAAGAAACCCATTGCTAGAGTT	58.014	39.130	0.00	0.00	0.00	3.01
383	384	5.385198	TGAAGAAACCCATTGCTAGAGTTT	58.615	37.500	0.00	0.00	33.55	2.66
384	385	5.241506	TGAAGAAACCCATTGCTAGAGTTTG	59.758	40.000	0.00	0.00	31.14	2.93
385	386	4.082125	AGAAACCCATTGCTAGAGTTTGG	58.918	43.478	0.00	0.00	31.14	3.28
386	387	3.525800	AACCCATTGCTAGAGTTTGGT	57.474	42.857	0.00	0.00	0.00	3.67
387	388	3.525800	ACCCATTGCTAGAGTTTGGTT	57.474	42.857	0.00	0.00	0.00	3.67
388	389	3.157087	ACCCATTGCTAGAGTTTGGTTG	58.843	45.455	0.00	0.00	0.00	3.77
389	390	3.157087	CCCATTGCTAGAGTTTGGTTGT	58.843	45.455	0.00	0.00	0.00	3.32
390	391	3.191371	CCCATTGCTAGAGTTTGGTTGTC	59.809	47.826	0.00	0.00	0.00	3.18
391	392	3.820467	CCATTGCTAGAGTTTGGTTGTCA	59.180	43.478	0.00	0.00	0.00	3.58
392	393	4.320494	CCATTGCTAGAGTTTGGTTGTCAC	60.320	45.833	0.00	0.00	0.00	3.67
393	394	2.846193	TGCTAGAGTTTGGTTGTCACC	58.154	47.619	0.00	0.00	44.56	4.02
401	402	2.029964	GGTTGTCACCGGCGAAGA	59.970	61.111	9.30	2.10	31.60	2.87
402	403	1.595929	GGTTGTCACCGGCGAAGAA	60.596	57.895	9.30	0.00	31.60	2.52
403	404	1.566018	GGTTGTCACCGGCGAAGAAG	61.566	60.000	9.30	0.00	31.60	2.85
404	405	1.959226	TTGTCACCGGCGAAGAAGC	60.959	57.895	9.30	0.00	0.00	3.86
405	406	2.357034	GTCACCGGCGAAGAAGCA	60.357	61.111	9.30	0.00	39.27	3.91
406	407	2.357034	TCACCGGCGAAGAAGCAC	60.357	61.111	9.30	0.00	39.27	4.40
407	408	3.777925	CACCGGCGAAGAAGCACG	61.778	66.667	9.30	0.00	39.27	5.34
412	413	4.430423	GCGAAGAAGCACGCGTGG	62.430	66.667	37.47	21.27	44.91	4.94
413	414	2.733218	CGAAGAAGCACGCGTGGA	60.733	61.111	37.47	0.00	0.00	4.02
414	415	2.094659	CGAAGAAGCACGCGTGGAT	61.095	57.895	37.47	16.86	0.00	3.41
415	416	1.626654	CGAAGAAGCACGCGTGGATT	61.627	55.000	37.47	23.79	0.00	3.01
416	417	1.355971	GAAGAAGCACGCGTGGATTA	58.644	50.000	37.47	0.00	0.00	1.75
417	418	1.933853	GAAGAAGCACGCGTGGATTAT	59.066	47.619	37.47	19.08	0.00	1.28
418	419	1.571919	AGAAGCACGCGTGGATTATC	58.428	50.000	37.47	21.14	0.00	1.75
419	420	1.137086	AGAAGCACGCGTGGATTATCT	59.863	47.619	37.47	23.00	0.00	1.98
420	421	1.523095	GAAGCACGCGTGGATTATCTC	59.477	52.381	37.47	19.70	0.00	2.75
421	422	0.459899	AGCACGCGTGGATTATCTCA	59.540	50.000	37.47	0.00	0.00	3.27
422	423	1.069204	AGCACGCGTGGATTATCTCAT	59.931	47.619	37.47	8.09	0.00	2.90
423	424	1.193203	GCACGCGTGGATTATCTCATG	59.807	52.381	37.47	10.69	0.00	3.07
424	425	2.742774	CACGCGTGGATTATCTCATGA	58.257	47.619	31.15	0.00	0.00	3.07
425	426	2.472861	CACGCGTGGATTATCTCATGAC	59.527	50.000	31.15	0.00	0.00	3.06
426	427	1.716050	CGCGTGGATTATCTCATGACG	59.284	52.381	0.00	0.00	0.00	4.35
427	428	1.457303	GCGTGGATTATCTCATGACGC	59.543	52.381	6.96	6.96	39.62	5.19
428	429	2.864097	GCGTGGATTATCTCATGACGCT	60.864	50.000	13.50	0.00	41.53	5.07
429	430	3.384668	CGTGGATTATCTCATGACGCTT	58.615	45.455	0.00	0.00	0.00	4.68
430	431	3.804325	CGTGGATTATCTCATGACGCTTT	59.196	43.478	0.00	0.00	0.00	3.51
431	432	4.084849	CGTGGATTATCTCATGACGCTTTC	60.085	45.833	0.00	0.00	0.00	2.62
432	433	4.811024	GTGGATTATCTCATGACGCTTTCA	59.189	41.667	0.00	0.00	39.11	2.69
433	434	5.468072	GTGGATTATCTCATGACGCTTTCAT	59.532	40.000	0.00	0.00	46.75	2.57
434	435	6.017605	GTGGATTATCTCATGACGCTTTCATT	60.018	38.462	0.00	0.00	42.87	2.57
435	436	6.017687	TGGATTATCTCATGACGCTTTCATTG	60.018	38.462	0.00	0.00	42.87	2.82
436	437	5.739752	TTATCTCATGACGCTTTCATTGG	57.260	39.130	0.00	0.00	42.87	3.16
437	438	1.739466	TCTCATGACGCTTTCATTGGC	59.261	47.619	0.00	0.00	42.87	4.52
438	439	1.741706	CTCATGACGCTTTCATTGGCT	59.258	47.619	0.00	0.00	42.87	4.75
439	440	1.469703	TCATGACGCTTTCATTGGCTG	59.530	47.619	0.00	0.00	42.87	4.85
440	441	0.813184	ATGACGCTTTCATTGGCTGG	59.187	50.000	0.00	0.00	42.87	4.85
441	442	0.537143	TGACGCTTTCATTGGCTGGT	60.537	50.000	0.00	0.00	0.00	4.00
442	443	0.109597	GACGCTTTCATTGGCTGGTG	60.110	55.000	0.00	0.00	0.00	4.17
443	444	1.444895	CGCTTTCATTGGCTGGTGC	60.445	57.895	0.00	0.00	38.76	5.01
444	445	1.667151	GCTTTCATTGGCTGGTGCA	59.333	52.632	0.00	0.00	41.91	4.57
445	446	0.248289	GCTTTCATTGGCTGGTGCAT	59.752	50.000	0.00	0.00	41.91	3.96
446	447	2.004583	CTTTCATTGGCTGGTGCATG	57.995	50.000	0.00	0.00	41.91	4.06
447	448	0.609151	TTTCATTGGCTGGTGCATGG	59.391	50.000	0.00	0.00	41.91	3.66
448	449	1.259142	TTCATTGGCTGGTGCATGGG	61.259	55.000	0.00	0.00	41.91	4.00
449	450	3.078836	ATTGGCTGGTGCATGGGC	61.079	61.111	0.00	0.00	41.91	5.36
453	454	3.766691	GCTGGTGCATGGGCCAAG	61.767	66.667	11.89	7.58	40.13	3.61
454	455	3.072468	CTGGTGCATGGGCCAAGG	61.072	66.667	11.89	7.35	40.13	3.61
455	456	4.700448	TGGTGCATGGGCCAAGGG	62.700	66.667	11.89	4.32	40.13	3.95
456	457	4.702274	GGTGCATGGGCCAAGGGT	62.702	66.667	11.89	0.00	40.13	4.34
457	458	3.070576	GTGCATGGGCCAAGGGTC	61.071	66.667	11.89	0.00	40.13	4.46
458	459	4.738998	TGCATGGGCCAAGGGTCG	62.739	66.667	11.89	0.00	40.13	4.79
459	460	4.424711	GCATGGGCCAAGGGTCGA	62.425	66.667	11.89	0.00	0.00	4.20
460	461	2.597340	CATGGGCCAAGGGTCGAT	59.403	61.111	11.89	0.00	0.00	3.59
461	462	1.825191	CATGGGCCAAGGGTCGATG	60.825	63.158	11.89	0.00	37.20	3.84
462	463	2.000701	ATGGGCCAAGGGTCGATGA	61.001	57.895	11.89	0.00	0.00	2.92
463	464	2.124695	GGGCCAAGGGTCGATGAC	60.125	66.667	4.39	0.00	0.00	3.06
476	477	5.950965	GGTCGATGACCGCTATTAATATG	57.049	43.478	0.00	0.00	43.14	1.78
477	478	5.647589	GGTCGATGACCGCTATTAATATGA	58.352	41.667	0.00	0.00	43.14	2.15
478	479	5.515626	GGTCGATGACCGCTATTAATATGAC	59.484	44.000	0.00	0.00	43.14	3.06
479	480	6.323266	GTCGATGACCGCTATTAATATGACT	58.677	40.000	0.00	0.00	38.37	3.41
480	481	6.251589	GTCGATGACCGCTATTAATATGACTG	59.748	42.308	0.00	0.00	38.37	3.51
481	482	5.004821	CGATGACCGCTATTAATATGACTGC	59.995	44.000	0.00	0.00	0.00	4.40
482	483	4.234574	TGACCGCTATTAATATGACTGCG	58.765	43.478	15.38	15.38	41.30	5.18
483	484	4.235360	GACCGCTATTAATATGACTGCGT	58.765	43.478	18.81	10.77	40.24	5.24
484	485	4.628074	ACCGCTATTAATATGACTGCGTT	58.372	39.130	18.81	7.49	40.24	4.84
485	486	4.684703	ACCGCTATTAATATGACTGCGTTC	59.315	41.667	18.81	0.00	40.24	3.95
486	487	4.201494	CCGCTATTAATATGACTGCGTTCG	60.201	45.833	18.81	6.09	40.24	3.95
487	488	4.201494	CGCTATTAATATGACTGCGTTCGG	60.201	45.833	14.52	0.00	37.62	4.30
488	489	4.684703	GCTATTAATATGACTGCGTTCGGT	59.315	41.667	0.00	0.00	33.70	4.69
489	490	5.164080	GCTATTAATATGACTGCGTTCGGTC	60.164	44.000	0.00	0.00	46.39	4.79
493	494	2.050714	GACTGCGTTCGGTCGTCA	60.051	61.111	0.00	1.39	38.67	4.35
494	495	2.050351	ACTGCGTTCGGTCGTCAG	60.050	61.111	15.75	15.75	39.16	3.51
495	496	3.470567	CTGCGTTCGGTCGTCAGC	61.471	66.667	9.66	0.00	32.28	4.26
505	506	3.060000	TCGTCAGCCGACCGACAT	61.060	61.111	0.00	0.00	41.60	3.06
506	507	2.880879	CGTCAGCCGACCGACATG	60.881	66.667	0.00	0.00	39.11	3.21
507	508	2.261671	GTCAGCCGACCGACATGT	59.738	61.111	0.00	0.00	36.02	3.21
508	509	2.094659	GTCAGCCGACCGACATGTG	61.095	63.158	1.15	0.00	36.02	3.21
509	510	2.815211	CAGCCGACCGACATGTGG	60.815	66.667	1.15	7.98	0.00	4.17
510	511	2.994995	AGCCGACCGACATGTGGA	60.995	61.111	17.76	0.00	0.00	4.02
511	512	2.509336	GCCGACCGACATGTGGAG	60.509	66.667	17.76	11.86	0.00	3.86
512	513	2.509336	CCGACCGACATGTGGAGC	60.509	66.667	17.76	10.00	0.00	4.70
513	514	2.573869	CGACCGACATGTGGAGCT	59.426	61.111	17.76	0.00	0.00	4.09
514	515	1.807165	CGACCGACATGTGGAGCTG	60.807	63.158	17.76	1.61	0.00	4.24
515	516	1.293498	GACCGACATGTGGAGCTGT	59.707	57.895	17.76	4.59	0.00	4.40
516	517	1.004560	ACCGACATGTGGAGCTGTG	60.005	57.895	17.76	0.65	0.00	3.66
517	518	1.742880	CCGACATGTGGAGCTGTGG	60.743	63.158	9.73	0.00	0.00	4.17
518	519	2.393768	CGACATGTGGAGCTGTGGC	61.394	63.158	1.15	0.00	39.06	5.01
519	520	2.359107	ACATGTGGAGCTGTGGCG	60.359	61.111	0.00	0.00	44.37	5.69
520	521	2.046988	CATGTGGAGCTGTGGCGA	60.047	61.111	0.00	0.00	44.37	5.54
521	522	1.672030	CATGTGGAGCTGTGGCGAA	60.672	57.895	0.00	0.00	44.37	4.70
522	523	1.672356	ATGTGGAGCTGTGGCGAAC	60.672	57.895	0.00	0.00	44.37	3.95
523	524	2.280797	GTGGAGCTGTGGCGAACA	60.281	61.111	0.00	0.00	44.37	3.18
531	532	2.432628	GTGGCGAACACCGAGGAG	60.433	66.667	0.00	0.00	44.49	3.69
532	533	2.599281	TGGCGAACACCGAGGAGA	60.599	61.111	0.00	0.00	41.76	3.71
533	534	2.126031	GGCGAACACCGAGGAGAC	60.126	66.667	0.00	0.00	41.76	3.36
534	535	2.504244	GCGAACACCGAGGAGACG	60.504	66.667	0.00	1.84	41.76	4.18
535	536	2.504244	CGAACACCGAGGAGACGC	60.504	66.667	0.00	0.00	41.76	5.19
551	552	1.153978	CGCGCCAATGCATTTCAGT	60.154	52.632	9.83	0.00	37.32	3.41
552	553	0.733566	CGCGCCAATGCATTTCAGTT	60.734	50.000	9.83	0.00	37.32	3.16
553	554	1.431496	GCGCCAATGCATTTCAGTTT	58.569	45.000	9.83	0.00	37.32	2.66
564	565	6.783892	TGCATTTCAGTTTAAATTTGAGCC	57.216	33.333	0.00	0.00	0.00	4.70
572	573	7.153985	TCAGTTTAAATTTGAGCCTGAAATGG	58.846	34.615	0.00	0.00	0.00	3.16
573	574	6.369615	CAGTTTAAATTTGAGCCTGAAATGGG	59.630	38.462	0.00	0.00	0.00	4.00
587	588	3.716539	ATGGGTCGACGCGGACATG	62.717	63.158	25.18	0.00	38.70	3.21
591	592	1.414897	GTCGACGCGGACATGAAAC	59.585	57.895	12.47	0.00	36.91	2.78
593	594	2.776072	GACGCGGACATGAAACGG	59.224	61.111	12.47	0.00	0.00	4.44
595	596	1.079405	ACGCGGACATGAAACGGAT	60.079	52.632	12.47	0.00	0.00	4.18
596	597	1.348250	CGCGGACATGAAACGGATG	59.652	57.895	0.00	0.00	0.00	3.51
604	605	3.049206	ACATGAAACGGATGCGTTTTTG	58.951	40.909	33.33	31.15	41.42	2.44
605	606	2.126914	TGAAACGGATGCGTTTTTGG	57.873	45.000	33.33	0.00	41.42	3.28
609	610	1.846541	ACGGATGCGTTTTTGGTTTG	58.153	45.000	6.39	0.00	0.00	2.93
610	611	1.405821	ACGGATGCGTTTTTGGTTTGA	59.594	42.857	6.39	0.00	0.00	2.69
611	612	2.159226	ACGGATGCGTTTTTGGTTTGAA	60.159	40.909	6.39	0.00	0.00	2.69
612	613	3.056304	CGGATGCGTTTTTGGTTTGAAT	58.944	40.909	0.00	0.00	0.00	2.57
613	614	3.121113	CGGATGCGTTTTTGGTTTGAATC	59.879	43.478	0.00	0.00	0.00	2.52
615	616	3.422417	TGCGTTTTTGGTTTGAATCGA	57.578	38.095	0.00	0.00	0.00	3.59
616	617	3.109619	TGCGTTTTTGGTTTGAATCGAC	58.890	40.909	0.00	0.00	0.00	4.20
617	618	3.109619	GCGTTTTTGGTTTGAATCGACA	58.890	40.909	0.00	0.00	0.00	4.35
618	619	3.733727	GCGTTTTTGGTTTGAATCGACAT	59.266	39.130	0.00	0.00	0.00	3.06
619	620	4.374906	GCGTTTTTGGTTTGAATCGACATG	60.375	41.667	0.00	0.00	0.00	3.21
624	625	3.481453	TGGTTTGAATCGACATGTTGGA	58.519	40.909	13.27	8.04	0.00	3.53
638	639	1.950909	TGTTGGACCGGTGTTTTGATC	59.049	47.619	14.63	0.00	0.00	2.92
640	641	0.604243	TGGACCGGTGTTTTGATCCG	60.604	55.000	14.63	0.00	43.30	4.18
646	647	1.083489	GGTGTTTTGATCCGCGATGA	58.917	50.000	8.23	0.00	0.00	2.92
647	648	1.670811	GGTGTTTTGATCCGCGATGAT	59.329	47.619	8.23	1.60	0.00	2.45
648	649	2.097466	GGTGTTTTGATCCGCGATGATT	59.903	45.455	8.23	0.00	0.00	2.57
653	654	6.472163	GTGTTTTGATCCGCGATGATTTAAAT	59.528	34.615	8.23	0.00	0.00	1.40
655	656	6.370433	TTTGATCCGCGATGATTTAAATGA	57.630	33.333	8.23	0.00	0.00	2.57
657	658	6.558771	TGATCCGCGATGATTTAAATGAAT	57.441	33.333	8.23	0.00	0.00	2.57
663	664	6.349280	CCGCGATGATTTAAATGAATATGGGT	60.349	38.462	8.23	0.00	0.00	4.51
665	666	6.808212	GCGATGATTTAAATGAATATGGGTGG	59.192	38.462	5.17	0.00	0.00	4.61
667	668	8.023128	CGATGATTTAAATGAATATGGGTGGAC	58.977	37.037	5.17	0.00	0.00	4.02
673	674	6.790232	AAATGAATATGGGTGGACGAAATT	57.210	33.333	0.00	0.00	0.00	1.82
674	675	7.889873	AAATGAATATGGGTGGACGAAATTA	57.110	32.000	0.00	0.00	0.00	1.40
958	970	0.390735	AAATCCGTGTGTACTCGCCC	60.391	55.000	3.08	0.00	0.00	6.13
1313	1334	3.320879	CTGCACCCTCGGCATCACT	62.321	63.158	0.00	0.00	41.06	3.41
1326	1347	0.523072	CATCACTGGTTCCAAAGCCG	59.477	55.000	0.00	0.00	0.00	5.52
1500	1527	2.479750	GCCGTCTCCTCCTACGACC	61.480	68.421	0.00	0.00	41.55	4.79
1534	1567	0.250513	GAAACCATCTGCTCCTCCGT	59.749	55.000	0.00	0.00	0.00	4.69
1720	1777	4.038162	ACTGCTTCGTAGAGGTATGGATTC	59.962	45.833	0.00	0.00	38.43	2.52
1836	1902	5.940192	TGGTGACAAATGTGTGTATTCTC	57.060	39.130	0.00	0.00	38.41	2.87
1904	1970	6.257994	AGATCTAGGCCTCAATCAATCAAA	57.742	37.500	22.73	0.00	0.00	2.69
1925	1991	8.752005	TCAAATTATCTTCCGGAAAATCATCT	57.248	30.769	19.39	0.00	0.00	2.90
1978	2044	6.034044	CGTCAGTTCTTACTATCTTGAGCAAC	59.966	42.308	0.00	0.00	31.96	4.17
1989	2055	8.206325	ACTATCTTGAGCAACTGTGATATTTG	57.794	34.615	0.00	0.00	0.00	2.32
2059	2127	4.446311	CCCCCTTTCCATATAGTGACCAAG	60.446	50.000	0.00	0.00	0.00	3.61
2086	2154	1.702401	TGGTTATGCCAGACCAGTTGA	59.298	47.619	0.00	0.00	43.61	3.18
2218	2286	7.148018	CCCAAAACTTGAGCTATCATACATGTT	60.148	37.037	2.30	0.00	34.73	2.71
2243	2311	1.134521	GGTCGCCAATACATCACCAGA	60.135	52.381	0.00	0.00	0.00	3.86
2248	2317	3.627123	CGCCAATACATCACCAGATTTGA	59.373	43.478	0.00	0.00	30.20	2.69
2273	2342	4.180817	TCTTGCATATGTGTAACGGACAG	58.819	43.478	4.29	0.00	42.39	3.51
2289	2380	3.058293	CGGACAGCATTTTACACACATGT	60.058	43.478	0.00	0.00	43.30	3.21
2290	2381	4.556501	CGGACAGCATTTTACACACATGTT	60.557	41.667	0.00	0.00	40.48	2.71
2291	2382	5.288804	GGACAGCATTTTACACACATGTTT	58.711	37.500	0.00	0.00	40.48	2.83
2292	2383	5.402270	GGACAGCATTTTACACACATGTTTC	59.598	40.000	0.00	0.00	40.48	2.78
2293	2384	6.147864	ACAGCATTTTACACACATGTTTCT	57.852	33.333	0.00	0.00	40.48	2.52
2294	2385	5.978919	ACAGCATTTTACACACATGTTTCTG	59.021	36.000	0.00	0.00	40.48	3.02
2295	2386	6.183360	ACAGCATTTTACACACATGTTTCTGA	60.183	34.615	0.00	0.00	40.48	3.27
2296	2387	6.696583	CAGCATTTTACACACATGTTTCTGAA	59.303	34.615	0.00	0.00	40.48	3.02
2297	2388	7.222417	CAGCATTTTACACACATGTTTCTGAAA	59.778	33.333	0.00	0.00	40.48	2.69
2298	2389	7.927629	AGCATTTTACACACATGTTTCTGAAAT	59.072	29.630	6.06	0.00	40.48	2.17
2299	2390	8.216453	GCATTTTACACACATGTTTCTGAAATC	58.784	33.333	6.06	1.53	40.48	2.17
2300	2391	9.467258	CATTTTACACACATGTTTCTGAAATCT	57.533	29.630	6.06	0.00	40.48	2.40
2303	2394	9.944663	TTTACACACATGTTTCTGAAATCTTAC	57.055	29.630	6.06	0.00	40.48	2.34
2304	2395	7.566760	ACACACATGTTTCTGAAATCTTACA	57.433	32.000	6.06	0.20	34.46	2.41
2305	2396	7.417612	ACACACATGTTTCTGAAATCTTACAC	58.582	34.615	6.06	0.00	34.46	2.90
2306	2397	6.574832	CACACATGTTTCTGAAATCTTACACG	59.425	38.462	6.06	0.00	0.00	4.49
2307	2398	6.481976	ACACATGTTTCTGAAATCTTACACGA	59.518	34.615	6.06	0.00	0.00	4.35
2308	2399	6.792250	CACATGTTTCTGAAATCTTACACGAC	59.208	38.462	6.06	0.00	0.00	4.34
2309	2400	6.481976	ACATGTTTCTGAAATCTTACACGACA	59.518	34.615	6.06	0.00	0.00	4.35
2310	2401	6.525121	TGTTTCTGAAATCTTACACGACAG	57.475	37.500	6.06	0.00	0.00	3.51
2311	2402	6.277605	TGTTTCTGAAATCTTACACGACAGA	58.722	36.000	6.06	0.00	0.00	3.41
2312	2403	6.929049	TGTTTCTGAAATCTTACACGACAGAT	59.071	34.615	6.06	0.00	33.90	2.90
2313	2404	6.951256	TTCTGAAATCTTACACGACAGATG	57.049	37.500	0.00	0.00	33.90	2.90
2317	2408	2.363788	TCTTACACGACAGATGCACC	57.636	50.000	0.00	0.00	0.00	5.01
2339	2430	5.535030	ACCATGAGTTTCAACTTTCTAACCC	59.465	40.000	0.00	0.00	39.88	4.11
2343	2434	8.846211	CATGAGTTTCAACTTTCTAACCCTTTA	58.154	33.333	0.00	0.00	39.88	1.85
2529	2620	2.492090	GCGAGAGATGCCGTCACT	59.508	61.111	0.00	0.00	0.00	3.41
2567	2658	1.840650	CCACCCAAACCCCATTGCA	60.841	57.895	0.00	0.00	0.00	4.08
2571	2662	1.840650	CCAAACCCCATTGCACCCA	60.841	57.895	0.00	0.00	0.00	4.51
2586	2677	2.547642	GCACCCATTAACTTTGCTGCAA	60.548	45.455	11.69	11.69	0.00	4.08
2590	2681	4.526262	ACCCATTAACTTTGCTGCAACATA	59.474	37.500	15.72	5.77	0.00	2.29
2608	2699	5.041191	ACATATGCTTTCCCTTCCTACAG	57.959	43.478	1.58	0.00	0.00	2.74
2651	2742	2.629017	ATTTGGTTTGGCCCTCTGAT	57.371	45.000	0.00	0.00	36.04	2.90
2750	2844	0.544357	TGGATCGAGTGGTCCTGGTT	60.544	55.000	4.50	0.00	35.49	3.67
2771	2865	1.576421	GTATGCGGCAATGGCTAGC	59.424	57.895	6.82	6.04	41.54	3.42
2785	2879	4.342862	TGGCTAGCTGAAACATAGGATC	57.657	45.455	15.72	0.00	0.00	3.36
2820	2914	8.027189	TGGCTAATGAATACATACAGATACGAC	58.973	37.037	0.00	0.00	35.50	4.34
2829	2923	0.465824	ACAGATACGACGGGGAGAGG	60.466	60.000	0.00	0.00	0.00	3.69
2899	2993	5.336610	CCTGACCATTTGACATTTGTGCATA	60.337	40.000	0.00	0.00	0.00	3.14
2900	2994	6.283544	TGACCATTTGACATTTGTGCATAT	57.716	33.333	0.00	0.00	0.00	1.78
2931	3025	2.101783	GCACATGATTGATGGTCCCAA	58.898	47.619	0.00	0.00	36.23	4.12
2934	3028	4.383335	GCACATGATTGATGGTCCCAATTT	60.383	41.667	0.00	0.00	36.23	1.82
2948	3042	1.201414	CCAATTTAGGGTGAACGTGGC	59.799	52.381	0.00	0.00	0.00	5.01
3013	3107	5.693814	CAGTTTGTGCTCTGAAGATTTACC	58.306	41.667	0.00	0.00	34.02	2.85
3047	3141	4.271776	GCATTTGCTAATTTCAGGCCAATC	59.728	41.667	5.01	0.00	38.21	2.67
3075	3169	3.680475	GCGGTAACATCCACATTCACCTA	60.680	47.826	0.00	0.00	0.00	3.08
3096	3190	6.267928	ACCTATAGCCTCACTTTGGTACATAG	59.732	42.308	0.00	0.00	43.03	2.23
3123	3224	7.201776	TAAATTACCATTTCTACATGCGCATGT	60.202	33.333	45.96	45.96	42.29	3.21
3147	3248	5.604565	TCACTTGATCAGTATAGCACATGG	58.395	41.667	0.00	0.00	32.76	3.66
3148	3249	4.212847	CACTTGATCAGTATAGCACATGGC	59.787	45.833	0.00	0.00	37.10	4.40
3267	3370	2.804986	TTGCTAGCATCCACCATTCA	57.195	45.000	20.13	0.00	0.00	2.57
3273	3376	1.035139	GCATCCACCATTCACCCATC	58.965	55.000	0.00	0.00	0.00	3.51
3274	3377	1.696063	CATCCACCATTCACCCATCC	58.304	55.000	0.00	0.00	0.00	3.51
3295	3399	6.037786	TCCCTTCACTTTGACACATAGTAG	57.962	41.667	0.00	0.00	0.00	2.57
3299	3403	6.536582	CCTTCACTTTGACACATAGTAGATGG	59.463	42.308	0.00	0.00	0.00	3.51
3312	3417	7.498900	CACATAGTAGATGGGCAACTGAATTAA	59.501	37.037	0.00	0.00	0.00	1.40
3315	3420	4.046286	AGATGGGCAACTGAATTAACCA	57.954	40.909	0.00	0.00	31.80	3.67
3361	3466	6.173339	TGCAAGACTAATCTAAGTTCTTGGG	58.827	40.000	10.71	0.00	36.37	4.12
3369	3474	9.856162	ACTAATCTAAGTTCTTGGGTAAAACAA	57.144	29.630	0.00	0.00	0.00	2.83
3397	3502	7.336427	AGCTCAACTTGAAATTATCTGGAGAAG	59.664	37.037	0.00	0.00	0.00	2.85
3399	3504	6.375455	TCAACTTGAAATTATCTGGAGAAGCC	59.625	38.462	0.00	0.00	37.10	4.35
3400	3505	6.072199	ACTTGAAATTATCTGGAGAAGCCT	57.928	37.500	0.00	0.00	37.63	4.58
3401	3506	6.488715	ACTTGAAATTATCTGGAGAAGCCTT	58.511	36.000	0.00	0.00	37.63	4.35
3403	3508	7.772757	ACTTGAAATTATCTGGAGAAGCCTTAG	59.227	37.037	0.00	0.00	37.63	2.18
3517	3632	1.679305	TGACAGCCTCGTCTCCCTC	60.679	63.158	0.00	0.00	36.82	4.30
3651	3768	3.394606	ACACAATACAAACTCTCCCCAGT	59.605	43.478	0.00	0.00	0.00	4.00
3663	3780	4.351111	ACTCTCCCCAGTAAACATCACTTT	59.649	41.667	0.00	0.00	0.00	2.66
3687	3804	6.864421	TCCTACCTAGACTGGTGATATCATT	58.136	40.000	9.02	0.00	41.05	2.57
3782	3902	3.932483	ACGTTCCGGGAGCGGTTT	61.932	61.111	31.79	12.88	40.38	3.27
3785	3905	3.618750	TTCCGGGAGCGGTTTCGT	61.619	61.111	0.00	0.00	38.89	3.85
4143	4263	2.434884	CCAGCGTCAACGGCTGAT	60.435	61.111	20.65	0.00	42.05	2.90
4145	4265	2.507102	AGCGTCAACGGCTGATCG	60.507	61.111	0.00	0.00	40.23	3.69
4147	4267	2.126071	CGTCAACGGCTGATCGGT	60.126	61.111	0.00	0.00	36.14	4.69
4148	4268	2.158959	CGTCAACGGCTGATCGGTC	61.159	63.158	0.00	0.00	36.14	4.79
4149	4269	2.158959	GTCAACGGCTGATCGGTCG	61.159	63.158	26.29	26.29	40.40	4.79
4150	4270	2.180769	CAACGGCTGATCGGTCGA	59.819	61.111	33.68	0.00	37.76	4.20
4151	4271	2.158959	CAACGGCTGATCGGTCGAC	61.159	63.158	33.68	7.13	37.76	4.20
4152	4272	3.352338	AACGGCTGATCGGTCGACC	62.352	63.158	33.68	25.28	37.76	4.79
4153	4273	3.518998	CGGCTGATCGGTCGACCT	61.519	66.667	30.92	14.84	36.31	3.85
4154	4274	2.413765	GGCTGATCGGTCGACCTC	59.586	66.667	30.92	22.69	0.00	3.85
4155	4275	2.024871	GCTGATCGGTCGACCTCG	59.975	66.667	30.92	19.28	41.45	4.63
4157	4277	3.471244	CTGATCGGTCGACCTCGGC	62.471	68.421	30.92	17.70	44.28	5.54
4165	4285	4.552365	CGACCTCGGCATGGGCAT	62.552	66.667	0.00	0.00	43.71	4.40
4166	4286	2.903855	GACCTCGGCATGGGCATG	60.904	66.667	0.00	0.00	43.71	4.06
4167	4287	4.511246	ACCTCGGCATGGGCATGG	62.511	66.667	0.00	0.00	43.71	3.66
4172	4292	3.936203	GGCATGGGCATGGGCATG	61.936	66.667	0.00	0.00	43.71	4.06
4173	4293	3.158648	GCATGGGCATGGGCATGT	61.159	61.111	0.00	0.00	43.71	3.21
4174	4294	2.818841	CATGGGCATGGGCATGTG	59.181	61.111	0.00	0.00	43.71	3.21
4175	4295	3.158648	ATGGGCATGGGCATGTGC	61.159	61.111	0.00	0.00	43.71	4.57
4176	4296	3.986116	ATGGGCATGGGCATGTGCA	62.986	57.895	7.36	0.00	43.00	4.57
4177	4297	3.158648	GGGCATGGGCATGTGCAT	61.159	61.111	7.36	0.00	43.00	3.96
4178	4298	2.108157	GGCATGGGCATGTGCATG	59.892	61.111	7.36	7.74	43.00	4.06
4179	4299	2.108157	GCATGGGCATGTGCATGG	59.892	61.111	13.28	0.00	44.36	3.66
4180	4300	2.428085	GCATGGGCATGTGCATGGA	61.428	57.895	13.28	0.00	44.36	3.41
4181	4301	1.440060	CATGGGCATGTGCATGGAC	59.560	57.895	10.90	10.90	44.36	4.02
4182	4302	1.000612	ATGGGCATGTGCATGGACA	59.999	52.632	22.95	22.95	44.36	4.02
4183	4303	0.397957	ATGGGCATGTGCATGGACAT	60.398	50.000	25.39	25.39	44.36	3.06
4226	4346	4.283722	ACAGAATACATAGGGGGATCGAAC	59.716	45.833	0.00	0.00	0.00	3.95
4239	4362	1.578023	GATCGAACGTGTTGAGTAGCG	59.422	52.381	0.00	0.00	0.00	4.26
4240	4363	0.587768	TCGAACGTGTTGAGTAGCGA	59.412	50.000	0.00	0.00	0.00	4.93
4281	4412	4.944962	TTCGTTTTGTAGCTGATGATGG	57.055	40.909	0.00	0.00	0.00	3.51
4324	4467	3.130633	TGCATGTAATAGATGACGGCAC	58.869	45.455	0.00	0.00	0.00	5.01
4343	4486	3.580658	GCGTTTTATCTGCGACCAC	57.419	52.632	0.00	0.00	0.00	4.16
4347	4490	3.669557	GCGTTTTATCTGCGACCACAAAT	60.670	43.478	0.00	0.00	0.00	2.32
4364	4507	5.323900	CACAAATATCAAAACGAGCACGAT	58.676	37.500	11.40	0.00	42.66	3.73
4365	4508	5.225743	CACAAATATCAAAACGAGCACGATG	59.774	40.000	11.40	6.49	42.66	3.84
4366	4509	5.121611	ACAAATATCAAAACGAGCACGATGA	59.878	36.000	11.40	11.62	42.66	2.92
4444	4587	0.882927	TCGTTTGGCAGTGCAGTACC	60.883	55.000	18.61	3.58	0.00	3.34
4492	4677	2.032071	GCGTGCCAACAGTACCCT	59.968	61.111	0.00	0.00	0.00	4.34
4493	4678	1.189524	AGCGTGCCAACAGTACCCTA	61.190	55.000	0.00	0.00	0.00	3.53
4494	4679	1.017701	GCGTGCCAACAGTACCCTAC	61.018	60.000	0.00	0.00	0.00	3.18
4495	4680	0.390735	CGTGCCAACAGTACCCTACC	60.391	60.000	0.00	0.00	0.00	3.18
4496	4681	0.035725	GTGCCAACAGTACCCTACCC	60.036	60.000	0.00	0.00	0.00	3.69
4562	4751	3.482156	ACATGTCCTGCCTGATATGTC	57.518	47.619	8.52	0.00	41.48	3.06
4578	4767	2.042741	TCGTCGATGGGCCCCTTA	60.043	61.111	22.27	0.00	0.00	2.69
4591	4780	0.106719	CCCCTTACGGCATGGACATT	60.107	55.000	0.00	0.00	0.00	2.71
4592	4781	1.024271	CCCTTACGGCATGGACATTG	58.976	55.000	0.00	0.00	0.00	2.82
4630	4819	1.055849	TTGGGCTCTGTGCTTGAGTA	58.944	50.000	1.44	0.00	42.39	2.59
4631	4820	0.610174	TGGGCTCTGTGCTTGAGTAG	59.390	55.000	1.44	0.00	42.39	2.57
4632	4821	0.610687	GGGCTCTGTGCTTGAGTAGT	59.389	55.000	1.44	0.00	42.39	2.73
4652	4841	4.607239	AGTAGTAGGGCTTGCTACAGTAA	58.393	43.478	22.87	0.00	37.97	2.24
4659	4848	1.327764	GCTTGCTACAGTAACGATGCC	59.672	52.381	0.00	0.00	0.00	4.40
4709	4898	4.394712	CCGGAGCGGCCAGAAAGT	62.395	66.667	2.24	0.00	41.17	2.66
4711	4900	2.347490	GGAGCGGCCAGAAAGTGA	59.653	61.111	2.24	0.00	36.34	3.41
4712	4901	1.743252	GGAGCGGCCAGAAAGTGAG	60.743	63.158	2.24	0.00	36.34	3.51
4713	4902	1.004440	GAGCGGCCAGAAAGTGAGT	60.004	57.895	2.24	0.00	0.00	3.41
4714	4903	0.246635	GAGCGGCCAGAAAGTGAGTA	59.753	55.000	2.24	0.00	0.00	2.59
4715	4904	0.247736	AGCGGCCAGAAAGTGAGTAG	59.752	55.000	2.24	0.00	0.00	2.57
4716	4905	0.246635	GCGGCCAGAAAGTGAGTAGA	59.753	55.000	2.24	0.00	0.00	2.59
4761	4950	2.031163	CCGAGATCGATTGGGCCC	59.969	66.667	17.59	17.59	43.02	5.80
4919	5109	1.528129	CCCAGCTCCAGTCTTTCAAC	58.472	55.000	0.00	0.00	0.00	3.18
4925	5115	2.772287	CTCCAGTCTTTCAACCAGACC	58.228	52.381	0.00	0.00	41.55	3.85
4928	5118	2.816087	CCAGTCTTTCAACCAGACCATG	59.184	50.000	0.00	0.00	41.55	3.66
4998	5188	2.796304	TGAAAGCAGAAACAACAAGCG	58.204	42.857	0.00	0.00	0.00	4.68
5062	5335	1.202521	CCCACAAGCAAGAAACAACCC	60.203	52.381	0.00	0.00	0.00	4.11
5075	5348	2.169832	ACAACCCTTCTCACATCACG	57.830	50.000	0.00	0.00	0.00	4.35
5124	5397	5.846164	TCCCAGAAGATCTTGGCTCATTATA	59.154	40.000	14.00	0.00	29.91	0.98
5125	5398	6.503217	TCCCAGAAGATCTTGGCTCATTATAT	59.497	38.462	14.00	0.00	29.91	0.86
5126	5399	7.017950	TCCCAGAAGATCTTGGCTCATTATATT	59.982	37.037	14.00	0.00	29.91	1.28
5127	5400	7.668886	CCCAGAAGATCTTGGCTCATTATATTT	59.331	37.037	14.00	0.00	0.00	1.40
5128	5401	8.512956	CCAGAAGATCTTGGCTCATTATATTTG	58.487	37.037	14.00	0.00	0.00	2.32
5129	5402	8.021973	CAGAAGATCTTGGCTCATTATATTTGC	58.978	37.037	14.00	0.00	0.00	3.68
5130	5403	7.722728	AGAAGATCTTGGCTCATTATATTTGCA	59.277	33.333	14.00	0.00	0.00	4.08
5131	5404	7.211966	AGATCTTGGCTCATTATATTTGCAC	57.788	36.000	0.00	0.00	0.00	4.57
5132	5405	7.002879	AGATCTTGGCTCATTATATTTGCACT	58.997	34.615	0.00	0.00	0.00	4.40
5133	5406	6.381481	TCTTGGCTCATTATATTTGCACTG	57.619	37.500	0.00	0.00	0.00	3.66
5134	5407	4.572985	TGGCTCATTATATTTGCACTGC	57.427	40.909	0.00	0.00	0.00	4.40
5135	5408	3.952967	TGGCTCATTATATTTGCACTGCA	59.047	39.130	0.00	0.00	36.47	4.41
5136	5409	4.585581	TGGCTCATTATATTTGCACTGCAT	59.414	37.500	4.10	0.00	38.76	3.96
5137	5410	4.921515	GGCTCATTATATTTGCACTGCATG	59.078	41.667	4.10	0.00	38.76	4.06

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
7	8	3.188786	GGCCTCGACGTGCATCAC	61.189	66.667	12.68	0.00	0.00	3.06
8	9	3.017771	ATGGCCTCGACGTGCATCA	62.018	57.895	3.32	4.63	0.00	3.07
9	10	2.202932	ATGGCCTCGACGTGCATC	60.203	61.111	3.32	0.00	0.00	3.91
10	11	2.512286	CATGGCCTCGACGTGCAT	60.512	61.111	3.32	0.56	0.00	3.96
11	12	3.529341	AACATGGCCTCGACGTGCA	62.529	57.895	3.32	0.00	29.10	4.57
12	13	2.742372	AACATGGCCTCGACGTGC	60.742	61.111	3.32	0.00	29.10	5.34
13	14	3.027170	GCAACATGGCCTCGACGTG	62.027	63.158	3.32	0.00	33.07	4.49
14	15	2.742372	GCAACATGGCCTCGACGT	60.742	61.111	3.32	0.00	0.00	4.34
15	16	2.434884	AGCAACATGGCCTCGACG	60.435	61.111	3.32	0.00	0.00	5.12
16	17	2.109126	GGAGCAACATGGCCTCGAC	61.109	63.158	3.32	0.00	0.00	4.20
17	18	1.841302	AAGGAGCAACATGGCCTCGA	61.841	55.000	3.32	0.00	0.00	4.04
18	19	1.377725	AAGGAGCAACATGGCCTCG	60.378	57.895	3.32	0.00	0.00	4.63
19	20	0.610232	ACAAGGAGCAACATGGCCTC	60.610	55.000	3.32	0.00	0.00	4.70
20	21	0.178953	AACAAGGAGCAACATGGCCT	60.179	50.000	3.32	0.00	0.00	5.19
21	22	0.244721	GAACAAGGAGCAACATGGCC	59.755	55.000	0.00	0.00	0.00	5.36
22	23	1.200948	GAGAACAAGGAGCAACATGGC	59.799	52.381	0.00	0.00	0.00	4.40
23	24	1.466167	CGAGAACAAGGAGCAACATGG	59.534	52.381	0.00	0.00	0.00	3.66
24	25	2.414481	CTCGAGAACAAGGAGCAACATG	59.586	50.000	6.58	0.00	0.00	3.21
25	26	2.613977	CCTCGAGAACAAGGAGCAACAT	60.614	50.000	15.71	0.00	34.35	2.71
26	27	1.270305	CCTCGAGAACAAGGAGCAACA	60.270	52.381	15.71	0.00	34.35	3.33
27	28	1.433534	CCTCGAGAACAAGGAGCAAC	58.566	55.000	15.71	0.00	34.35	4.17
28	29	0.321671	CCCTCGAGAACAAGGAGCAA	59.678	55.000	15.71	0.00	34.35	3.91
29	30	1.975327	CCCTCGAGAACAAGGAGCA	59.025	57.895	15.71	0.00	34.35	4.26
30	31	1.448717	GCCCTCGAGAACAAGGAGC	60.449	63.158	15.71	0.00	34.35	4.70
31	32	0.321671	TTGCCCTCGAGAACAAGGAG	59.678	55.000	15.71	0.00	34.35	3.69
32	33	0.762418	TTTGCCCTCGAGAACAAGGA	59.238	50.000	15.71	1.03	34.35	3.36
33	34	0.875059	GTTTGCCCTCGAGAACAAGG	59.125	55.000	15.71	7.19	0.00	3.61
34	35	0.875059	GGTTTGCCCTCGAGAACAAG	59.125	55.000	15.71	0.00	0.00	3.16
35	36	3.015516	GGTTTGCCCTCGAGAACAA	57.984	52.632	15.71	14.60	0.00	2.83
36	37	4.792087	GGTTTGCCCTCGAGAACA	57.208	55.556	15.71	8.73	0.00	3.18
46	47	2.781431	ATTGGGAGGTCGGGTTTGCC	62.781	60.000	0.00	0.00	0.00	4.52
47	48	1.304134	ATTGGGAGGTCGGGTTTGC	60.304	57.895	0.00	0.00	0.00	3.68
48	49	0.965363	CCATTGGGAGGTCGGGTTTG	60.965	60.000	0.00	0.00	35.59	2.93
49	50	1.382629	CCATTGGGAGGTCGGGTTT	59.617	57.895	0.00	0.00	35.59	3.27
50	51	3.087065	CCATTGGGAGGTCGGGTT	58.913	61.111	0.00	0.00	35.59	4.11
60	61	0.394899	GCCAGACTCTTCCCATTGGG	60.395	60.000	16.26	16.26	46.11	4.12
61	62	0.745845	CGCCAGACTCTTCCCATTGG	60.746	60.000	0.00	0.00	0.00	3.16
62	63	1.372087	GCGCCAGACTCTTCCCATTG	61.372	60.000	0.00	0.00	0.00	2.82
63	64	1.078143	GCGCCAGACTCTTCCCATT	60.078	57.895	0.00	0.00	0.00	3.16
64	65	2.586792	GCGCCAGACTCTTCCCAT	59.413	61.111	0.00	0.00	0.00	4.00
65	66	4.069232	CGCGCCAGACTCTTCCCA	62.069	66.667	0.00	0.00	0.00	4.37
66	67	2.707849	TACGCGCCAGACTCTTCCC	61.708	63.158	5.73	0.00	0.00	3.97
67	68	1.516603	GTACGCGCCAGACTCTTCC	60.517	63.158	5.73	0.00	0.00	3.46
68	69	0.523757	GAGTACGCGCCAGACTCTTC	60.524	60.000	18.73	0.13	37.27	2.87
69	70	1.507174	GAGTACGCGCCAGACTCTT	59.493	57.895	18.73	0.00	37.27	2.85
70	71	2.408241	GGAGTACGCGCCAGACTCT	61.408	63.158	22.77	6.46	39.66	3.24
71	72	2.102553	GGAGTACGCGCCAGACTC	59.897	66.667	18.10	18.10	39.12	3.36
72	73	3.812019	CGGAGTACGCGCCAGACT	61.812	66.667	5.73	4.38	33.93	3.24
73	74	4.849329	CCGGAGTACGCGCCAGAC	62.849	72.222	5.73	0.00	42.52	3.51
78	79	4.865761	TGATGCCGGAGTACGCGC	62.866	66.667	5.05	0.00	42.52	6.86
79	80	2.655364	CTGATGCCGGAGTACGCG	60.655	66.667	5.05	3.53	42.52	6.01
80	81	1.589196	GACTGATGCCGGAGTACGC	60.589	63.158	5.05	0.00	42.52	4.42
81	82	1.298413	CGACTGATGCCGGAGTACG	60.298	63.158	5.05	2.15	43.80	3.67
82	83	1.589196	GCGACTGATGCCGGAGTAC	60.589	63.158	5.05	0.00	0.00	2.73
83	84	1.753078	AGCGACTGATGCCGGAGTA	60.753	57.895	5.05	0.00	0.00	2.59
84	85	3.071206	AGCGACTGATGCCGGAGT	61.071	61.111	5.05	0.00	0.00	3.85
85	86	2.584418	CAGCGACTGATGCCGGAG	60.584	66.667	5.05	0.00	32.44	4.63
91	92	2.806856	GCCGAAGCAGCGACTGATG	61.807	63.158	10.46	0.00	39.53	3.07
92	93	2.510238	GCCGAAGCAGCGACTGAT	60.510	61.111	10.46	1.72	39.53	2.90
100	101	3.043713	TTGCTCACGCCGAAGCAG	61.044	61.111	15.86	0.00	39.83	4.24
101	102	3.345808	GTTGCTCACGCCGAAGCA	61.346	61.111	13.31	13.31	39.83	3.91
102	103	4.430423	CGTTGCTCACGCCGAAGC	62.430	66.667	8.84	8.84	43.37	3.86
110	111	3.712881	GTGCCGGTCGTTGCTCAC	61.713	66.667	1.90	0.00	0.00	3.51
111	112	2.089887	TAAGTGCCGGTCGTTGCTCA	62.090	55.000	1.90	0.00	0.00	4.26
112	113	1.373748	TAAGTGCCGGTCGTTGCTC	60.374	57.895	1.90	0.00	0.00	4.26
113	114	1.666872	GTAAGTGCCGGTCGTTGCT	60.667	57.895	1.90	0.00	0.00	3.91
114	115	2.858158	GTAAGTGCCGGTCGTTGC	59.142	61.111	1.90	0.00	0.00	4.17
115	116	3.007070	GCGTAAGTGCCGGTCGTTG	62.007	63.158	1.90	0.00	41.68	4.10
116	117	2.735857	GCGTAAGTGCCGGTCGTT	60.736	61.111	1.90	0.00	41.68	3.85
117	118	3.291101	ATGCGTAAGTGCCGGTCGT	62.291	57.895	1.90	0.00	41.68	4.34
118	119	2.508439	ATGCGTAAGTGCCGGTCG	60.508	61.111	1.90	0.16	41.68	4.79
119	120	1.146358	GAGATGCGTAAGTGCCGGTC	61.146	60.000	1.90	0.00	41.68	4.79
120	121	1.153628	GAGATGCGTAAGTGCCGGT	60.154	57.895	1.90	0.00	41.68	5.28
121	122	1.883084	GGAGATGCGTAAGTGCCGG	60.883	63.158	0.00	0.00	41.68	6.13
122	123	0.872021	GAGGAGATGCGTAAGTGCCG	60.872	60.000	0.00	0.00	41.68	5.69
123	124	0.872021	CGAGGAGATGCGTAAGTGCC	60.872	60.000	0.00	0.00	41.68	5.01
124	125	0.872021	CCGAGGAGATGCGTAAGTGC	60.872	60.000	0.00	0.00	41.68	4.40
125	126	0.872021	GCCGAGGAGATGCGTAAGTG	60.872	60.000	0.00	0.00	41.68	3.16
126	127	1.437986	GCCGAGGAGATGCGTAAGT	59.562	57.895	0.00	0.00	41.68	2.24
127	128	1.658717	CGCCGAGGAGATGCGTAAG	60.659	63.158	0.00	0.00	43.12	2.34
128	129	2.411701	CGCCGAGGAGATGCGTAA	59.588	61.111	0.00	0.00	43.12	3.18
133	134	4.498520	ACGCACGCCGAGGAGATG	62.499	66.667	0.00	0.00	41.02	2.90
134	135	4.194720	GACGCACGCCGAGGAGAT	62.195	66.667	0.00	0.00	41.02	2.75
151	152	1.953138	GCATCTCGATCCGCAGTGG	60.953	63.158	0.00	0.00	40.09	4.00
152	153	1.953138	GGCATCTCGATCCGCAGTG	60.953	63.158	0.00	0.00	0.00	3.66
153	154	1.960040	TTGGCATCTCGATCCGCAGT	61.960	55.000	0.00	0.00	0.00	4.40
154	155	0.602106	ATTGGCATCTCGATCCGCAG	60.602	55.000	0.00	0.00	0.00	5.18
155	156	0.601046	GATTGGCATCTCGATCCGCA	60.601	55.000	0.00	0.00	0.00	5.69
156	157	1.621301	CGATTGGCATCTCGATCCGC	61.621	60.000	12.97	0.00	37.05	5.54
157	158	1.621301	GCGATTGGCATCTCGATCCG	61.621	60.000	20.08	4.53	42.87	4.18
158	159	1.621301	CGCGATTGGCATCTCGATCC	61.621	60.000	20.08	5.46	39.55	3.36
159	160	1.777819	CGCGATTGGCATCTCGATC	59.222	57.895	20.08	5.28	39.55	3.69
160	161	2.313172	GCGCGATTGGCATCTCGAT	61.313	57.895	12.10	0.00	39.55	3.59
161	162	2.961721	GCGCGATTGGCATCTCGA	60.962	61.111	12.10	0.00	39.55	4.04
162	163	4.345547	CGCGCGATTGGCATCTCG	62.346	66.667	28.94	13.70	43.84	4.04
163	164	4.005472	CCGCGCGATTGGCATCTC	62.005	66.667	34.63	0.00	43.84	2.75
169	170	4.178214	ATGTTGCCGCGCGATTGG	62.178	61.111	34.63	16.16	0.00	3.16
170	171	2.648724	GATGTTGCCGCGCGATTG	60.649	61.111	34.63	16.59	0.00	2.67
171	172	2.472059	ATGATGTTGCCGCGCGATT	61.472	52.632	34.63	8.67	0.00	3.34
172	173	2.896854	ATGATGTTGCCGCGCGAT	60.897	55.556	34.63	17.06	0.00	4.58
173	174	3.863543	CATGATGTTGCCGCGCGA	61.864	61.111	34.63	11.85	0.00	5.87
174	175	4.164664	ACATGATGTTGCCGCGCG	62.165	61.111	25.67	25.67	0.00	6.86
175	176	2.277501	GACATGATGTTGCCGCGC	60.278	61.111	0.00	0.00	0.00	6.86
176	177	2.404789	GGACATGATGTTGCCGCG	59.595	61.111	0.00	0.00	0.00	6.46
177	178	2.404789	CGGACATGATGTTGCCGC	59.595	61.111	11.92	0.00	35.17	6.53
178	179	2.472059	CCCGGACATGATGTTGCCG	61.472	63.158	16.19	16.19	41.53	5.69
179	180	0.107410	TACCCGGACATGATGTTGCC	60.107	55.000	0.73	0.00	0.00	4.52
180	181	1.014352	GTACCCGGACATGATGTTGC	58.986	55.000	0.73	0.00	0.00	4.17
181	182	1.134936	TCGTACCCGGACATGATGTTG	60.135	52.381	0.73	0.00	33.95	3.33
182	183	1.134907	GTCGTACCCGGACATGATGTT	60.135	52.381	0.73	0.00	33.95	2.71
183	184	0.458669	GTCGTACCCGGACATGATGT	59.541	55.000	0.73	0.00	33.95	3.06
184	185	0.458260	TGTCGTACCCGGACATGATG	59.542	55.000	0.73	0.00	33.95	3.07
185	186	1.134907	GTTGTCGTACCCGGACATGAT	60.135	52.381	0.73	0.00	33.95	2.45
186	187	0.244450	GTTGTCGTACCCGGACATGA	59.756	55.000	0.73	0.00	33.95	3.07
187	188	0.245539	AGTTGTCGTACCCGGACATG	59.754	55.000	0.73	0.00	33.95	3.21
188	189	1.474077	GTAGTTGTCGTACCCGGACAT	59.526	52.381	0.73	0.00	33.95	3.06
189	190	0.881118	GTAGTTGTCGTACCCGGACA	59.119	55.000	0.73	0.00	33.95	4.02
190	191	1.168714	AGTAGTTGTCGTACCCGGAC	58.831	55.000	0.73	0.00	33.95	4.79
191	192	2.356135	GTAGTAGTTGTCGTACCCGGA	58.644	52.381	0.73	0.00	33.95	5.14
192	193	1.401905	GGTAGTAGTTGTCGTACCCGG	59.598	57.143	0.00	0.00	30.43	5.73
193	194	2.096496	CAGGTAGTAGTTGTCGTACCCG	59.904	54.545	0.00	0.00	36.36	5.28
194	195	3.347216	TCAGGTAGTAGTTGTCGTACCC	58.653	50.000	0.00	0.00	36.36	3.69
195	196	4.457257	AGTTCAGGTAGTAGTTGTCGTACC	59.543	45.833	0.00	0.00	36.01	3.34
196	197	5.619625	AGTTCAGGTAGTAGTTGTCGTAC	57.380	43.478	0.00	0.00	0.00	3.67
197	198	5.182001	GGAAGTTCAGGTAGTAGTTGTCGTA	59.818	44.000	5.01	0.00	0.00	3.43
198	199	4.022503	GGAAGTTCAGGTAGTAGTTGTCGT	60.023	45.833	5.01	0.00	0.00	4.34
199	200	4.022589	TGGAAGTTCAGGTAGTAGTTGTCG	60.023	45.833	5.01	0.00	0.00	4.35
200	201	5.464030	TGGAAGTTCAGGTAGTAGTTGTC	57.536	43.478	5.01	0.00	0.00	3.18
201	202	6.231211	CAATGGAAGTTCAGGTAGTAGTTGT	58.769	40.000	5.01	0.00	0.00	3.32
202	203	5.122396	GCAATGGAAGTTCAGGTAGTAGTTG	59.878	44.000	5.01	0.00	0.00	3.16
203	204	5.246307	GCAATGGAAGTTCAGGTAGTAGTT	58.754	41.667	5.01	0.00	0.00	2.24
204	205	4.323562	GGCAATGGAAGTTCAGGTAGTAGT	60.324	45.833	5.01	0.00	0.00	2.73
205	206	4.192317	GGCAATGGAAGTTCAGGTAGTAG	58.808	47.826	5.01	0.00	0.00	2.57
206	207	3.585289	TGGCAATGGAAGTTCAGGTAGTA	59.415	43.478	5.01	0.00	0.00	1.82
207	208	2.375174	TGGCAATGGAAGTTCAGGTAGT	59.625	45.455	5.01	0.00	0.00	2.73
208	209	3.071874	TGGCAATGGAAGTTCAGGTAG	57.928	47.619	5.01	0.00	0.00	3.18
209	210	3.620488	GATGGCAATGGAAGTTCAGGTA	58.380	45.455	5.01	0.00	0.00	3.08
210	211	2.450476	GATGGCAATGGAAGTTCAGGT	58.550	47.619	5.01	0.00	0.00	4.00
211	212	1.402968	CGATGGCAATGGAAGTTCAGG	59.597	52.381	5.01	0.00	0.00	3.86
212	213	2.086869	ACGATGGCAATGGAAGTTCAG	58.913	47.619	5.01	0.00	0.00	3.02
213	214	1.811965	CACGATGGCAATGGAAGTTCA	59.188	47.619	5.01	0.00	0.00	3.18
214	215	1.468054	GCACGATGGCAATGGAAGTTC	60.468	52.381	0.00	0.00	0.00	3.01
215	216	0.527565	GCACGATGGCAATGGAAGTT	59.472	50.000	0.00	0.00	0.00	2.66
216	217	0.322816	AGCACGATGGCAATGGAAGT	60.323	50.000	0.00	0.00	35.83	3.01
217	218	0.813184	AAGCACGATGGCAATGGAAG	59.187	50.000	0.00	0.00	35.83	3.46
218	219	0.527113	CAAGCACGATGGCAATGGAA	59.473	50.000	0.00	0.00	35.83	3.53
219	220	1.314534	CCAAGCACGATGGCAATGGA	61.315	55.000	13.56	0.00	42.36	3.41
220	221	1.140161	CCAAGCACGATGGCAATGG	59.860	57.895	0.00	0.00	36.92	3.16
221	222	0.457166	CACCAAGCACGATGGCAATG	60.457	55.000	0.00	0.00	41.89	2.82
222	223	1.885157	CACCAAGCACGATGGCAAT	59.115	52.632	0.00	0.00	41.89	3.56
223	224	2.918345	GCACCAAGCACGATGGCAA	61.918	57.895	0.00	0.00	44.79	4.52
224	225	3.364441	GCACCAAGCACGATGGCA	61.364	61.111	0.00	0.00	44.79	4.92
233	234	3.587923	TGCAAATTTCTATGCACCAAGC	58.412	40.909	0.00	0.00	46.87	4.01
234	235	4.813027	ACTGCAAATTTCTATGCACCAAG	58.187	39.130	0.00	0.00	46.87	3.61
235	236	4.615682	CGACTGCAAATTTCTATGCACCAA	60.616	41.667	0.00	0.00	46.87	3.67
236	237	3.119884	CGACTGCAAATTTCTATGCACCA	60.120	43.478	0.00	0.00	46.87	4.17
237	238	3.429085	CGACTGCAAATTTCTATGCACC	58.571	45.455	0.00	0.00	46.87	5.01
238	239	2.848302	GCGACTGCAAATTTCTATGCAC	59.152	45.455	0.00	0.00	46.87	4.57
240	241	3.103738	CAGCGACTGCAAATTTCTATGC	58.896	45.455	0.00	0.00	46.23	3.14
253	254	2.505777	CTCGTGAGGCAGCGACTG	60.506	66.667	2.92	2.92	33.33	3.51
254	255	3.753434	CCTCGTGAGGCAGCGACT	61.753	66.667	2.38	0.00	42.44	4.18
263	264	3.782244	GCGTGCTTGCCTCGTGAG	61.782	66.667	8.43	0.00	33.27	3.51
266	267	3.851845	TAACGCGTGCTTGCCTCGT	62.852	57.895	14.98	0.00	33.27	4.18
267	268	3.071459	CTAACGCGTGCTTGCCTCG	62.071	63.158	14.98	0.00	0.00	4.63
268	269	2.778679	CTAACGCGTGCTTGCCTC	59.221	61.111	14.98	0.00	0.00	4.70
269	270	3.423154	GCTAACGCGTGCTTGCCT	61.423	61.111	14.98	0.00	0.00	4.75
281	282	0.522915	CCTCCTTCGTCGTCGCTAAC	60.523	60.000	0.00	0.00	36.96	2.34
282	283	0.674581	TCCTCCTTCGTCGTCGCTAA	60.675	55.000	0.00	0.00	36.96	3.09
283	284	0.674581	TTCCTCCTTCGTCGTCGCTA	60.675	55.000	0.00	0.00	36.96	4.26
284	285	1.924320	CTTCCTCCTTCGTCGTCGCT	61.924	60.000	0.00	0.00	36.96	4.93
285	286	1.514443	CTTCCTCCTTCGTCGTCGC	60.514	63.158	0.00	0.00	36.96	5.19
286	287	0.097325	CTCTTCCTCCTTCGTCGTCG	59.903	60.000	0.00	0.00	38.55	5.12
287	288	0.179158	GCTCTTCCTCCTTCGTCGTC	60.179	60.000	0.00	0.00	0.00	4.20
288	289	1.884444	GCTCTTCCTCCTTCGTCGT	59.116	57.895	0.00	0.00	0.00	4.34
289	290	1.226435	CGCTCTTCCTCCTTCGTCG	60.226	63.158	0.00	0.00	0.00	5.12
290	291	1.517475	GCGCTCTTCCTCCTTCGTC	60.517	63.158	0.00	0.00	0.00	4.20
291	292	2.574399	GCGCTCTTCCTCCTTCGT	59.426	61.111	0.00	0.00	0.00	3.85
292	293	2.580867	CGCGCTCTTCCTCCTTCG	60.581	66.667	5.56	0.00	0.00	3.79
293	294	2.202810	CCGCGCTCTTCCTCCTTC	60.203	66.667	5.56	0.00	0.00	3.46
294	295	3.775654	CCCGCGCTCTTCCTCCTT	61.776	66.667	5.56	0.00	0.00	3.36
295	296	4.761058	TCCCGCGCTCTTCCTCCT	62.761	66.667	5.56	0.00	0.00	3.69
296	297	4.214327	CTCCCGCGCTCTTCCTCC	62.214	72.222	5.56	0.00	0.00	4.30
297	298	4.214327	CCTCCCGCGCTCTTCCTC	62.214	72.222	5.56	0.00	0.00	3.71
298	299	4.761058	TCCTCCCGCGCTCTTCCT	62.761	66.667	5.56	0.00	0.00	3.36
299	300	4.516195	GTCCTCCCGCGCTCTTCC	62.516	72.222	5.56	0.00	0.00	3.46
300	301	4.856607	CGTCCTCCCGCGCTCTTC	62.857	72.222	5.56	0.00	0.00	2.87
303	304	4.856607	CTTCGTCCTCCCGCGCTC	62.857	72.222	5.56	0.00	0.00	5.03
317	318	3.733960	GTTTGCCCCCGACGCTTC	61.734	66.667	0.00	0.00	0.00	3.86
318	319	3.785122	AAGTTTGCCCCCGACGCTT	62.785	57.895	0.00	0.00	0.00	4.68
319	320	4.265056	AAGTTTGCCCCCGACGCT	62.265	61.111	0.00	0.00	0.00	5.07
320	321	3.733960	GAAGTTTGCCCCCGACGC	61.734	66.667	0.00	0.00	0.00	5.19
321	322	3.053896	GGAAGTTTGCCCCCGACG	61.054	66.667	0.00	0.00	0.00	5.12
322	323	2.675423	GGGAAGTTTGCCCCCGAC	60.675	66.667	0.00	0.00	39.81	4.79
330	331	2.212652	GCAAAAGCAAGGGGAAGTTTG	58.787	47.619	0.00	0.00	0.00	2.93
331	332	1.140852	GGCAAAAGCAAGGGGAAGTTT	59.859	47.619	0.00	0.00	0.00	2.66
332	333	0.758734	GGCAAAAGCAAGGGGAAGTT	59.241	50.000	0.00	0.00	0.00	2.66
333	334	1.463553	CGGCAAAAGCAAGGGGAAGT	61.464	55.000	0.00	0.00	0.00	3.01
334	335	1.178534	TCGGCAAAAGCAAGGGGAAG	61.179	55.000	0.00	0.00	0.00	3.46
335	336	0.757188	TTCGGCAAAAGCAAGGGGAA	60.757	50.000	0.00	0.00	0.00	3.97
336	337	1.152652	TTCGGCAAAAGCAAGGGGA	60.153	52.632	0.00	0.00	0.00	4.81
337	338	1.290009	CTTCGGCAAAAGCAAGGGG	59.710	57.895	0.00	0.00	0.00	4.79
338	339	4.972591	CTTCGGCAAAAGCAAGGG	57.027	55.556	0.00	0.00	0.00	3.95
344	345	0.030101	TTCAACGGCTTCGGCAAAAG	59.970	50.000	0.00	0.00	43.96	2.27
345	346	0.030101	CTTCAACGGCTTCGGCAAAA	59.970	50.000	0.00	0.00	43.96	2.44
346	347	0.816018	TCTTCAACGGCTTCGGCAAA	60.816	50.000	0.00	0.00	43.96	3.68
347	348	0.816018	TTCTTCAACGGCTTCGGCAA	60.816	50.000	0.00	0.00	43.96	4.52
348	349	0.816018	TTTCTTCAACGGCTTCGGCA	60.816	50.000	0.00	0.00	43.96	5.69
349	350	0.385598	GTTTCTTCAACGGCTTCGGC	60.386	55.000	0.00	0.00	38.38	5.54
350	351	0.237498	GGTTTCTTCAACGGCTTCGG	59.763	55.000	0.00	0.00	36.05	4.30
351	352	0.237498	GGGTTTCTTCAACGGCTTCG	59.763	55.000	0.00	0.00	36.05	3.79
352	353	1.314730	TGGGTTTCTTCAACGGCTTC	58.685	50.000	0.00	0.00	36.05	3.86
353	354	1.995376	ATGGGTTTCTTCAACGGCTT	58.005	45.000	0.00	0.00	36.05	4.35
354	355	1.613437	CAATGGGTTTCTTCAACGGCT	59.387	47.619	0.00	0.00	36.05	5.52
355	356	1.934849	GCAATGGGTTTCTTCAACGGC	60.935	52.381	0.00	0.00	36.05	5.68
356	357	1.613437	AGCAATGGGTTTCTTCAACGG	59.387	47.619	0.00	0.00	36.05	4.44
357	358	3.751175	TCTAGCAATGGGTTTCTTCAACG	59.249	43.478	0.00	0.00	36.05	4.10
358	359	4.762251	ACTCTAGCAATGGGTTTCTTCAAC	59.238	41.667	0.00	0.00	34.18	3.18
359	360	4.985538	ACTCTAGCAATGGGTTTCTTCAA	58.014	39.130	0.00	0.00	0.00	2.69
360	361	4.640771	ACTCTAGCAATGGGTTTCTTCA	57.359	40.909	0.00	0.00	0.00	3.02
361	362	5.335976	CCAAACTCTAGCAATGGGTTTCTTC	60.336	44.000	0.00	0.00	0.00	2.87
362	363	4.524328	CCAAACTCTAGCAATGGGTTTCTT	59.476	41.667	0.00	0.00	0.00	2.52
363	364	4.082125	CCAAACTCTAGCAATGGGTTTCT	58.918	43.478	0.00	0.00	0.00	2.52
364	365	3.826729	ACCAAACTCTAGCAATGGGTTTC	59.173	43.478	8.07	0.00	35.44	2.78
365	366	3.844640	ACCAAACTCTAGCAATGGGTTT	58.155	40.909	8.07	0.00	35.44	3.27
366	367	3.525800	ACCAAACTCTAGCAATGGGTT	57.474	42.857	8.07	0.00	35.44	4.11
367	368	3.157087	CAACCAAACTCTAGCAATGGGT	58.843	45.455	8.07	0.00	35.44	4.51
368	369	3.157087	ACAACCAAACTCTAGCAATGGG	58.843	45.455	8.07	0.00	35.44	4.00
369	370	3.820467	TGACAACCAAACTCTAGCAATGG	59.180	43.478	0.00	0.00	37.19	3.16
370	371	4.320494	GGTGACAACCAAACTCTAGCAATG	60.320	45.833	0.00	0.00	46.75	2.82
371	372	3.821033	GGTGACAACCAAACTCTAGCAAT	59.179	43.478	0.00	0.00	46.75	3.56
372	373	3.211045	GGTGACAACCAAACTCTAGCAA	58.789	45.455	0.00	0.00	46.75	3.91
373	374	2.846193	GGTGACAACCAAACTCTAGCA	58.154	47.619	0.00	0.00	46.75	3.49
384	385	1.566018	CTTCTTCGCCGGTGACAACC	61.566	60.000	19.40	0.00	43.76	3.77
385	386	1.860078	CTTCTTCGCCGGTGACAAC	59.140	57.895	19.40	0.00	0.00	3.32
386	387	1.959226	GCTTCTTCGCCGGTGACAA	60.959	57.895	19.40	12.59	0.00	3.18
387	388	2.357034	GCTTCTTCGCCGGTGACA	60.357	61.111	19.40	4.20	0.00	3.58
388	389	2.357034	TGCTTCTTCGCCGGTGAC	60.357	61.111	19.40	6.39	0.00	3.67
389	390	2.357034	GTGCTTCTTCGCCGGTGA	60.357	61.111	15.21	15.21	0.00	4.02
390	391	3.777925	CGTGCTTCTTCGCCGGTG	61.778	66.667	9.28	9.28	0.00	4.94
396	397	1.626654	AATCCACGCGTGCTTCTTCG	61.627	55.000	33.17	17.66	0.00	3.79
397	398	1.355971	TAATCCACGCGTGCTTCTTC	58.644	50.000	33.17	0.00	0.00	2.87
398	399	1.933853	GATAATCCACGCGTGCTTCTT	59.066	47.619	33.17	22.28	0.00	2.52
399	400	1.137086	AGATAATCCACGCGTGCTTCT	59.863	47.619	33.17	23.18	0.00	2.85
400	401	1.523095	GAGATAATCCACGCGTGCTTC	59.477	52.381	33.17	21.54	0.00	3.86
401	402	1.134818	TGAGATAATCCACGCGTGCTT	60.135	47.619	33.17	27.16	0.00	3.91
402	403	0.459899	TGAGATAATCCACGCGTGCT	59.540	50.000	33.17	22.72	0.00	4.40
403	404	1.193203	CATGAGATAATCCACGCGTGC	59.807	52.381	33.17	18.25	0.00	5.34
404	405	2.472861	GTCATGAGATAATCCACGCGTG	59.527	50.000	31.77	31.77	0.00	5.34
405	406	2.743938	GTCATGAGATAATCCACGCGT	58.256	47.619	5.58	5.58	0.00	6.01
406	407	1.716050	CGTCATGAGATAATCCACGCG	59.284	52.381	3.53	3.53	0.00	6.01
407	408	1.457303	GCGTCATGAGATAATCCACGC	59.543	52.381	0.00	0.70	40.80	5.34
408	409	3.018598	AGCGTCATGAGATAATCCACG	57.981	47.619	0.00	0.00	0.00	4.94
409	410	4.811024	TGAAAGCGTCATGAGATAATCCAC	59.189	41.667	0.00	0.00	0.00	4.02
410	411	5.022282	TGAAAGCGTCATGAGATAATCCA	57.978	39.130	0.00	0.00	0.00	3.41
411	412	6.369005	CAATGAAAGCGTCATGAGATAATCC	58.631	40.000	0.00	0.00	46.80	3.01
412	413	6.369005	CCAATGAAAGCGTCATGAGATAATC	58.631	40.000	0.00	0.00	46.80	1.75
413	414	5.278169	GCCAATGAAAGCGTCATGAGATAAT	60.278	40.000	0.00	0.00	46.80	1.28
414	415	4.035558	GCCAATGAAAGCGTCATGAGATAA	59.964	41.667	0.00	0.00	46.80	1.75
415	416	3.561310	GCCAATGAAAGCGTCATGAGATA	59.439	43.478	0.00	0.00	46.80	1.98
416	417	2.357009	GCCAATGAAAGCGTCATGAGAT	59.643	45.455	0.00	0.00	46.80	2.75
417	418	1.739466	GCCAATGAAAGCGTCATGAGA	59.261	47.619	0.00	0.00	46.80	3.27
418	419	1.741706	AGCCAATGAAAGCGTCATGAG	59.258	47.619	0.00	3.51	46.80	2.90
419	420	1.469703	CAGCCAATGAAAGCGTCATGA	59.530	47.619	6.69	0.00	46.80	3.07
420	421	1.468565	CCAGCCAATGAAAGCGTCATG	60.469	52.381	6.69	0.00	46.80	3.07
422	423	0.537143	ACCAGCCAATGAAAGCGTCA	60.537	50.000	0.00	0.00	41.67	4.35
423	424	0.109597	CACCAGCCAATGAAAGCGTC	60.110	55.000	0.00	0.00	0.00	5.19
424	425	1.959085	CACCAGCCAATGAAAGCGT	59.041	52.632	0.00	0.00	0.00	5.07
425	426	1.444895	GCACCAGCCAATGAAAGCG	60.445	57.895	0.00	0.00	33.58	4.68
426	427	0.248289	ATGCACCAGCCAATGAAAGC	59.752	50.000	0.00	0.00	41.13	3.51
427	428	1.404986	CCATGCACCAGCCAATGAAAG	60.405	52.381	0.00	0.00	41.13	2.62
428	429	0.609151	CCATGCACCAGCCAATGAAA	59.391	50.000	0.00	0.00	41.13	2.69
429	430	1.259142	CCCATGCACCAGCCAATGAA	61.259	55.000	0.00	0.00	41.13	2.57
430	431	1.683025	CCCATGCACCAGCCAATGA	60.683	57.895	0.00	0.00	41.13	2.57
431	432	2.897207	CCCATGCACCAGCCAATG	59.103	61.111	0.00	0.00	41.13	2.82
432	433	3.078836	GCCCATGCACCAGCCAAT	61.079	61.111	0.00	0.00	41.13	3.16
436	437	3.766691	CTTGGCCCATGCACCAGC	61.767	66.667	0.00	0.00	40.13	4.85
437	438	3.072468	CCTTGGCCCATGCACCAG	61.072	66.667	0.00	1.50	40.13	4.00
438	439	4.700448	CCCTTGGCCCATGCACCA	62.700	66.667	0.00	1.01	40.13	4.17
439	440	4.702274	ACCCTTGGCCCATGCACC	62.702	66.667	0.00	0.00	40.13	5.01
440	441	3.070576	GACCCTTGGCCCATGCAC	61.071	66.667	0.00	0.00	40.13	4.57
441	442	4.738998	CGACCCTTGGCCCATGCA	62.739	66.667	0.00	0.00	40.13	3.96
442	443	3.721370	ATCGACCCTTGGCCCATGC	62.721	63.158	0.00	0.00	0.00	4.06
443	444	1.825191	CATCGACCCTTGGCCCATG	60.825	63.158	0.00	0.00	0.00	3.66
444	445	2.000701	TCATCGACCCTTGGCCCAT	61.001	57.895	0.00	0.00	0.00	4.00
445	446	2.609299	TCATCGACCCTTGGCCCA	60.609	61.111	0.00	0.00	0.00	5.36
446	447	2.124695	GTCATCGACCCTTGGCCC	60.125	66.667	0.00	0.00	0.00	5.80
447	448	2.124695	GGTCATCGACCCTTGGCC	60.125	66.667	0.00	0.00	46.19	5.36
455	456	6.251589	CAGTCATATTAATAGCGGTCATCGAC	59.748	42.308	1.02	0.00	42.43	4.20
456	457	6.322491	CAGTCATATTAATAGCGGTCATCGA	58.678	40.000	1.02	0.00	42.43	3.59
457	458	5.004821	GCAGTCATATTAATAGCGGTCATCG	59.995	44.000	1.02	0.00	42.76	3.84
458	459	5.004821	CGCAGTCATATTAATAGCGGTCATC	59.995	44.000	14.80	0.00	40.00	2.92
459	460	4.864806	CGCAGTCATATTAATAGCGGTCAT	59.135	41.667	14.80	0.00	40.00	3.06
460	461	4.234574	CGCAGTCATATTAATAGCGGTCA	58.765	43.478	14.80	0.00	40.00	4.02
461	462	4.235360	ACGCAGTCATATTAATAGCGGTC	58.765	43.478	22.30	6.09	46.96	4.79
462	463	4.252971	ACGCAGTCATATTAATAGCGGT	57.747	40.909	22.30	10.81	46.96	5.68
463	464	4.201494	CGAACGCAGTCATATTAATAGCGG	60.201	45.833	22.30	10.37	45.00	5.52
464	465	4.201494	CCGAACGCAGTCATATTAATAGCG	60.201	45.833	18.87	18.87	45.00	4.26
465	466	4.684703	ACCGAACGCAGTCATATTAATAGC	59.315	41.667	1.02	0.00	45.00	2.97
466	467	5.059343	CGACCGAACGCAGTCATATTAATAG	59.941	44.000	1.02	0.00	45.00	1.73
467	468	4.913345	CGACCGAACGCAGTCATATTAATA	59.087	41.667	0.00	0.00	45.00	0.98
468	469	3.734231	CGACCGAACGCAGTCATATTAAT	59.266	43.478	0.00	0.00	45.00	1.40
469	470	3.110358	CGACCGAACGCAGTCATATTAA	58.890	45.455	0.00	0.00	45.00	1.40
470	471	2.097954	ACGACCGAACGCAGTCATATTA	59.902	45.455	0.00	0.00	45.00	0.98
471	472	1.135199	ACGACCGAACGCAGTCATATT	60.135	47.619	0.00	0.00	45.00	1.28
472	473	0.454600	ACGACCGAACGCAGTCATAT	59.545	50.000	0.00	0.00	45.00	1.78
473	474	0.179181	GACGACCGAACGCAGTCATA	60.179	55.000	0.00	0.00	45.00	2.15
474	475	1.443872	GACGACCGAACGCAGTCAT	60.444	57.895	0.00	0.00	45.00	3.06
475	476	2.050714	GACGACCGAACGCAGTCA	60.051	61.111	0.00	0.00	45.00	3.41
476	477	2.050714	TGACGACCGAACGCAGTC	60.051	61.111	0.00	0.00	45.00	3.51
478	479	3.470567	GCTGACGACCGAACGCAG	61.471	66.667	14.92	14.92	38.93	5.18
491	492	2.261361	CACATGTCGGTCGGCTGA	59.739	61.111	0.00	0.00	0.00	4.26
492	493	2.815211	CCACATGTCGGTCGGCTG	60.815	66.667	0.00	0.00	0.00	4.85
493	494	2.994995	TCCACATGTCGGTCGGCT	60.995	61.111	12.26	0.00	0.00	5.52
494	495	2.509336	CTCCACATGTCGGTCGGC	60.509	66.667	12.26	0.00	0.00	5.54
495	496	2.509336	GCTCCACATGTCGGTCGG	60.509	66.667	12.26	3.93	0.00	4.79
496	497	1.807165	CAGCTCCACATGTCGGTCG	60.807	63.158	12.26	7.62	0.00	4.79
497	498	1.016130	CACAGCTCCACATGTCGGTC	61.016	60.000	12.26	7.36	0.00	4.79
498	499	1.004560	CACAGCTCCACATGTCGGT	60.005	57.895	12.26	0.00	0.00	4.69
499	500	1.742880	CCACAGCTCCACATGTCGG	60.743	63.158	0.00	1.27	0.00	4.79
500	501	2.393768	GCCACAGCTCCACATGTCG	61.394	63.158	0.00	0.00	35.50	4.35
501	502	2.393768	CGCCACAGCTCCACATGTC	61.394	63.158	0.00	0.00	36.60	3.06
502	503	2.359107	CGCCACAGCTCCACATGT	60.359	61.111	0.00	0.00	36.60	3.21
503	504	1.672030	TTCGCCACAGCTCCACATG	60.672	57.895	0.00	0.00	36.60	3.21
504	505	1.672356	GTTCGCCACAGCTCCACAT	60.672	57.895	0.00	0.00	36.60	3.21
505	506	2.280797	GTTCGCCACAGCTCCACA	60.281	61.111	0.00	0.00	36.60	4.17
506	507	2.280797	TGTTCGCCACAGCTCCAC	60.281	61.111	0.00	0.00	36.60	4.02
507	508	2.280797	GTGTTCGCCACAGCTCCA	60.281	61.111	0.00	0.00	43.92	3.86
512	513	2.738521	CCTCGGTGTTCGCCACAG	60.739	66.667	7.25	3.70	46.44	3.66
513	514	3.220999	CTCCTCGGTGTTCGCCACA	62.221	63.158	7.25	0.00	46.44	4.17
514	515	2.432628	CTCCTCGGTGTTCGCCAC	60.433	66.667	3.32	0.00	43.74	5.01
515	516	2.599281	TCTCCTCGGTGTTCGCCA	60.599	61.111	3.32	0.00	39.05	5.69
516	517	2.126031	GTCTCCTCGGTGTTCGCC	60.126	66.667	0.00	0.00	39.05	5.54
517	518	2.504244	CGTCTCCTCGGTGTTCGC	60.504	66.667	0.00	0.00	39.05	4.70
518	519	2.504244	GCGTCTCCTCGGTGTTCG	60.504	66.667	0.00	0.00	40.90	3.95
519	520	2.504244	CGCGTCTCCTCGGTGTTC	60.504	66.667	0.00	0.00	0.00	3.18
520	521	4.719369	GCGCGTCTCCTCGGTGTT	62.719	66.667	8.43	0.00	0.00	3.32
524	525	4.514577	ATTGGCGCGTCTCCTCGG	62.515	66.667	13.81	0.00	0.00	4.63
525	526	3.257561	CATTGGCGCGTCTCCTCG	61.258	66.667	13.81	0.00	0.00	4.63
526	527	3.567797	GCATTGGCGCGTCTCCTC	61.568	66.667	13.81	0.00	0.00	3.71
527	528	3.687321	ATGCATTGGCGCGTCTCCT	62.687	57.895	13.81	0.00	45.35	3.69
528	529	2.270297	AAATGCATTGGCGCGTCTCC	62.270	55.000	13.82	2.67	45.35	3.71
529	530	0.863119	GAAATGCATTGGCGCGTCTC	60.863	55.000	13.82	0.00	45.35	3.36
530	531	1.137404	GAAATGCATTGGCGCGTCT	59.863	52.632	13.82	0.00	45.35	4.18
531	532	1.135699	CTGAAATGCATTGGCGCGTC	61.136	55.000	13.82	2.29	45.35	5.19
532	533	1.153978	CTGAAATGCATTGGCGCGT	60.154	52.632	13.82	0.00	45.35	6.01
533	534	0.733566	AACTGAAATGCATTGGCGCG	60.734	50.000	13.82	0.00	45.35	6.86
534	535	1.431496	AAACTGAAATGCATTGGCGC	58.569	45.000	13.82	0.00	45.35	6.53
535	536	5.783100	ATTTAAACTGAAATGCATTGGCG	57.217	34.783	13.82	6.63	45.35	5.69
536	537	7.583230	TCAAATTTAAACTGAAATGCATTGGC	58.417	30.769	13.82	9.08	41.68	4.52
537	538	7.747357	GCTCAAATTTAAACTGAAATGCATTGG	59.253	33.333	13.82	9.03	0.00	3.16
541	542	6.424509	CAGGCTCAAATTTAAACTGAAATGCA	59.575	34.615	0.00	0.00	0.00	3.96
551	552	6.432403	ACCCATTTCAGGCTCAAATTTAAA	57.568	33.333	0.00	0.00	0.00	1.52
552	553	5.336372	CGACCCATTTCAGGCTCAAATTTAA	60.336	40.000	0.00	0.00	0.00	1.52
553	554	4.157656	CGACCCATTTCAGGCTCAAATTTA	59.842	41.667	0.00	0.00	0.00	1.40
564	565	2.452813	CCGCGTCGACCCATTTCAG	61.453	63.158	10.58	0.00	0.00	3.02
572	573	1.735198	TTTCATGTCCGCGTCGACC	60.735	57.895	10.58	1.77	31.35	4.79
573	574	1.414897	GTTTCATGTCCGCGTCGAC	59.585	57.895	5.18	5.18	0.00	4.20
577	578	1.079405	ATCCGTTTCATGTCCGCGT	60.079	52.632	4.92	0.00	0.00	6.01
591	592	2.126914	TCAAACCAAAAACGCATCCG	57.873	45.000	0.00	0.00	41.14	4.18
593	594	3.978217	TCGATTCAAACCAAAAACGCATC	59.022	39.130	0.00	0.00	0.00	3.91
595	596	3.109619	GTCGATTCAAACCAAAAACGCA	58.890	40.909	0.00	0.00	0.00	5.24
596	597	3.109619	TGTCGATTCAAACCAAAAACGC	58.890	40.909	0.00	0.00	0.00	4.84
604	605	3.365969	GGTCCAACATGTCGATTCAAACC	60.366	47.826	0.00	0.00	0.00	3.27
605	606	3.666902	CGGTCCAACATGTCGATTCAAAC	60.667	47.826	0.00	0.00	0.00	2.93
609	610	1.006832	CCGGTCCAACATGTCGATTC	58.993	55.000	0.00	0.00	0.00	2.52
610	611	0.323629	ACCGGTCCAACATGTCGATT	59.676	50.000	0.00	0.00	0.00	3.34
611	612	0.391130	CACCGGTCCAACATGTCGAT	60.391	55.000	2.59	0.00	0.00	3.59
612	613	1.005512	CACCGGTCCAACATGTCGA	60.006	57.895	2.59	0.00	0.00	4.20
613	614	0.882927	AACACCGGTCCAACATGTCG	60.883	55.000	2.59	0.00	0.00	4.35
615	616	1.407258	CAAAACACCGGTCCAACATGT	59.593	47.619	2.59	0.00	0.00	3.21
616	617	1.678627	TCAAAACACCGGTCCAACATG	59.321	47.619	2.59	0.00	0.00	3.21
617	618	2.060050	TCAAAACACCGGTCCAACAT	57.940	45.000	2.59	0.00	0.00	2.71
618	619	1.950909	GATCAAAACACCGGTCCAACA	59.049	47.619	2.59	0.00	0.00	3.33
619	620	1.268625	GGATCAAAACACCGGTCCAAC	59.731	52.381	2.59	0.00	0.00	3.77
624	625	2.322081	CGCGGATCAAAACACCGGT	61.322	57.895	0.00	0.00	45.66	5.28
638	639	6.029607	CCCATATTCATTTAAATCATCGCGG	58.970	40.000	6.13	0.00	0.00	6.46
640	641	6.808212	CCACCCATATTCATTTAAATCATCGC	59.192	38.462	0.00	0.00	0.00	4.58
646	647	7.889873	TTCGTCCACCCATATTCATTTAAAT	57.110	32.000	0.00	0.00	0.00	1.40
647	648	7.704578	TTTCGTCCACCCATATTCATTTAAA	57.295	32.000	0.00	0.00	0.00	1.52
648	649	7.889873	ATTTCGTCCACCCATATTCATTTAA	57.110	32.000	0.00	0.00	0.00	1.52
653	654	5.996644	ACTAATTTCGTCCACCCATATTCA	58.003	37.500	0.00	0.00	0.00	2.57
655	656	5.054477	CGACTAATTTCGTCCACCCATATT	58.946	41.667	0.00	0.00	34.16	1.28
657	658	4.049546	CGACTAATTTCGTCCACCCATA	57.950	45.455	0.00	0.00	34.16	2.74
667	668	1.657094	CCAACCGGACGACTAATTTCG	59.343	52.381	9.46	0.00	44.87	3.46
673	674	0.599558	CAACTCCAACCGGACGACTA	59.400	55.000	9.46	0.00	35.91	2.59
674	675	1.366366	CAACTCCAACCGGACGACT	59.634	57.895	9.46	0.00	35.91	4.18
679	680	0.250295	CAAGAGCAACTCCAACCGGA	60.250	55.000	9.46	0.00	39.79	5.14
958	970	2.107953	GAGCTAGCCCTGCTTCCG	59.892	66.667	12.13	0.00	41.30	4.30
1379	1406	4.329545	CTGGTGGTGGTGGGGACG	62.330	72.222	0.00	0.00	0.00	4.79
1440	1467	4.681978	GGTGACGGCTTCGGTGCT	62.682	66.667	0.00	0.00	38.38	4.40
1446	1473	3.050275	GCCACAGGTGACGGCTTC	61.050	66.667	0.00	0.00	42.78	3.86
1479	1506	0.747283	TCGTAGGAGGAGACGGCTTC	60.747	60.000	0.00	0.00	39.53	3.86
1500	1527	1.308998	GTTTCTGTGGTGGTGGAGTG	58.691	55.000	0.00	0.00	0.00	3.51
1534	1567	1.035932	GGGGATGAGTTCGTCGGAGA	61.036	60.000	0.00	0.00	32.78	3.71
1904	1970	8.408601	CAACAAGATGATTTTCCGGAAGATAAT	58.591	33.333	19.43	17.59	0.00	1.28
1925	1991	3.220940	TGCTCCAATGACATCACAACAA	58.779	40.909	0.00	0.00	0.00	2.83
1978	2044	4.581409	TCATGGTCATGGCAAATATCACAG	59.419	41.667	10.61	0.00	39.24	3.66
1989	2055	1.952296	GTGAAGGATCATGGTCATGGC	59.048	52.381	8.54	0.00	38.01	4.40
2137	2205	4.843728	CAAAAGTAGCCTAGACCATTCCA	58.156	43.478	0.00	0.00	0.00	3.53
2218	2286	3.942748	GGTGATGTATTGGCGACCTTTAA	59.057	43.478	0.00	0.00	0.00	1.52
2222	2290	0.908910	TGGTGATGTATTGGCGACCT	59.091	50.000	0.00	0.00	0.00	3.85
2243	2311	7.188834	CGTTACACATATGCAAGATGTCAAAT	58.811	34.615	13.22	4.56	35.31	2.32
2248	2317	4.570772	GTCCGTTACACATATGCAAGATGT	59.429	41.667	10.91	10.91	38.05	3.06
2273	2342	7.462109	TTTCAGAAACATGTGTGTAAAATGC	57.538	32.000	0.00	0.00	37.67	3.56
2289	2380	6.128553	GCATCTGTCGTGTAAGATTTCAGAAA	60.129	38.462	0.00	0.00	34.84	2.52
2290	2381	5.348724	GCATCTGTCGTGTAAGATTTCAGAA	59.651	40.000	0.00	0.00	34.84	3.02
2291	2382	4.864806	GCATCTGTCGTGTAAGATTTCAGA	59.135	41.667	0.00	0.00	35.47	3.27
2292	2383	4.627035	TGCATCTGTCGTGTAAGATTTCAG	59.373	41.667	0.00	0.00	30.62	3.02
2293	2384	4.388773	GTGCATCTGTCGTGTAAGATTTCA	59.611	41.667	0.00	0.00	30.62	2.69
2294	2385	4.201724	GGTGCATCTGTCGTGTAAGATTTC	60.202	45.833	0.00	0.00	30.62	2.17
2295	2386	3.684788	GGTGCATCTGTCGTGTAAGATTT	59.315	43.478	0.00	0.00	30.62	2.17
2296	2387	3.262420	GGTGCATCTGTCGTGTAAGATT	58.738	45.455	0.00	0.00	30.62	2.40
2297	2388	2.233676	TGGTGCATCTGTCGTGTAAGAT	59.766	45.455	0.00	0.00	33.34	2.40
2298	2389	1.616374	TGGTGCATCTGTCGTGTAAGA	59.384	47.619	0.00	0.00	0.00	2.10
2299	2390	2.078849	TGGTGCATCTGTCGTGTAAG	57.921	50.000	0.00	0.00	0.00	2.34
2300	2391	2.028567	TCATGGTGCATCTGTCGTGTAA	60.029	45.455	0.00	0.00	0.00	2.41
2301	2392	1.548269	TCATGGTGCATCTGTCGTGTA	59.452	47.619	0.00	0.00	0.00	2.90
2302	2393	0.321346	TCATGGTGCATCTGTCGTGT	59.679	50.000	0.00	0.00	0.00	4.49
2303	2394	1.004595	CTCATGGTGCATCTGTCGTG	58.995	55.000	0.00	0.00	0.00	4.35
2304	2395	0.610174	ACTCATGGTGCATCTGTCGT	59.390	50.000	0.00	0.00	0.00	4.34
2305	2396	1.730501	AACTCATGGTGCATCTGTCG	58.269	50.000	0.00	0.00	0.00	4.35
2306	2397	3.076621	TGAAACTCATGGTGCATCTGTC	58.923	45.455	0.00	0.00	0.00	3.51
2307	2398	3.144657	TGAAACTCATGGTGCATCTGT	57.855	42.857	0.00	0.00	0.00	3.41
2308	2399	3.504906	AGTTGAAACTCATGGTGCATCTG	59.495	43.478	0.00	0.00	32.86	2.90
2309	2400	3.759581	AGTTGAAACTCATGGTGCATCT	58.240	40.909	0.00	0.00	32.86	2.90
2310	2401	4.510038	AAGTTGAAACTCATGGTGCATC	57.490	40.909	0.00	0.00	38.57	3.91
2311	2402	4.586001	AGAAAGTTGAAACTCATGGTGCAT	59.414	37.500	0.00	0.00	38.57	3.96
2312	2403	3.953612	AGAAAGTTGAAACTCATGGTGCA	59.046	39.130	0.00	0.00	38.57	4.57
2313	2404	4.574599	AGAAAGTTGAAACTCATGGTGC	57.425	40.909	0.00	0.00	38.57	5.01
2317	2408	6.884280	AGGGTTAGAAAGTTGAAACTCATG	57.116	37.500	0.00	0.00	38.57	3.07
2523	2614	4.846137	GCAATGCTACTTACAAAAGTGACG	59.154	41.667	0.00	0.00	45.63	4.35
2529	2620	5.285651	GTGGTTGCAATGCTACTTACAAAA	58.714	37.500	18.12	0.00	34.94	2.44
2567	2658	2.697751	TGTTGCAGCAAAGTTAATGGGT	59.302	40.909	10.11	0.00	0.00	4.51
2586	2677	4.475016	ACTGTAGGAAGGGAAAGCATATGT	59.525	41.667	4.29	0.00	0.00	2.29
2590	2681	3.589288	AGAACTGTAGGAAGGGAAAGCAT	59.411	43.478	0.00	0.00	0.00	3.79
2602	2693	9.823647	AAAATCATAGTATGTGAGAACTGTAGG	57.176	33.333	9.94	0.00	0.00	3.18
2651	2742	2.561419	GCTCACCACCAAGTACTACTGA	59.439	50.000	0.00	0.00	0.00	3.41
2771	2865	2.158900	ACCCGCTGATCCTATGTTTCAG	60.159	50.000	0.00	0.00	39.87	3.02
2785	2879	0.107703	TTCATTAGCCAGACCCGCTG	60.108	55.000	0.00	0.00	44.49	5.18
2829	2923	2.301738	ACTAAGCTGTCCAGGGCCC	61.302	63.158	16.46	16.46	0.00	5.80
2899	2993	5.627135	TCAATCATGTGCCATACTGATCAT	58.373	37.500	0.00	0.00	31.31	2.45
2900	2994	5.038651	TCAATCATGTGCCATACTGATCA	57.961	39.130	0.00	0.00	31.31	2.92
2931	3025	0.322322	TCGCCACGTTCACCCTAAAT	59.678	50.000	0.00	0.00	0.00	1.40
2934	3028	1.290955	CTTCGCCACGTTCACCCTA	59.709	57.895	0.00	0.00	0.00	3.53
2942	3036	1.282570	CATTTGCACTTCGCCACGT	59.717	52.632	0.00	0.00	41.33	4.49
2944	3038	1.265635	TGTACATTTGCACTTCGCCAC	59.734	47.619	0.00	0.00	41.33	5.01
2948	3042	4.201812	CCACCTATGTACATTTGCACTTCG	60.202	45.833	14.77	0.00	0.00	3.79
3047	3141	0.719465	GTGGATGTTACCGCAACTCG	59.281	55.000	0.00	0.00	39.86	4.18
3075	3169	7.670605	TTACTATGTACCAAAGTGAGGCTAT	57.329	36.000	0.00	0.00	0.00	2.97
3096	3190	6.491394	TGCGCATGTAGAAATGGTAATTTAC	58.509	36.000	5.66	0.00	36.10	2.01
3117	3218	5.332883	GCTATACTGATCAAGTGAACATGCG	60.333	44.000	0.00	0.00	40.26	4.73
3123	3224	6.051074	CCATGTGCTATACTGATCAAGTGAA	58.949	40.000	0.00	0.00	40.26	3.18
3147	3248	1.369625	CGTTAACTGGGACCATCTGC	58.630	55.000	3.71	0.00	0.00	4.26
3148	3249	2.012051	GCCGTTAACTGGGACCATCTG	61.012	57.143	15.23	0.00	0.00	2.90
3267	3370	1.780309	TGTCAAAGTGAAGGGATGGGT	59.220	47.619	0.00	0.00	0.00	4.51
3273	3376	6.037786	TCTACTATGTGTCAAAGTGAAGGG	57.962	41.667	0.00	0.00	0.00	3.95
3274	3377	6.536582	CCATCTACTATGTGTCAAAGTGAAGG	59.463	42.308	0.00	0.00	0.00	3.46
3295	3399	3.509575	TGTGGTTAATTCAGTTGCCCATC	59.490	43.478	0.00	0.00	0.00	3.51
3299	3403	4.519540	ACATGTGGTTAATTCAGTTGCC	57.480	40.909	0.00	0.00	0.00	4.52
3312	3417	2.159114	GCACCAGAACAAAACATGTGGT	60.159	45.455	0.00	0.00	42.99	4.16
3315	3420	4.470334	AAAGCACCAGAACAAAACATGT	57.530	36.364	0.00	0.00	46.82	3.21
3369	3474	8.489489	TCTCCAGATAATTTCAAGTTGAGCTAT	58.511	33.333	5.56	4.69	0.00	2.97
3397	3502	4.695455	TCTTGTTTGTATGTCAGCTAAGGC	59.305	41.667	0.00	0.00	39.06	4.35
3399	3504	6.785488	TGTCTTGTTTGTATGTCAGCTAAG	57.215	37.500	0.00	0.00	0.00	2.18
3400	3505	6.765989	AGTTGTCTTGTTTGTATGTCAGCTAA	59.234	34.615	0.00	0.00	0.00	3.09
3401	3506	6.202762	CAGTTGTCTTGTTTGTATGTCAGCTA	59.797	38.462	0.00	0.00	0.00	3.32
3403	3508	5.007626	TCAGTTGTCTTGTTTGTATGTCAGC	59.992	40.000	0.00	0.00	0.00	4.26
3406	3511	6.907212	CAGTTCAGTTGTCTTGTTTGTATGTC	59.093	38.462	0.00	0.00	0.00	3.06
3651	3768	7.093465	CCAGTCTAGGTAGGAAAGTGATGTTTA	60.093	40.741	0.00	0.00	0.00	2.01
3663	3780	5.924769	TGATATCACCAGTCTAGGTAGGA	57.075	43.478	0.00	0.00	40.77	2.94
3687	3804	0.321346	TCAGATCAACGAAGCTGCCA	59.679	50.000	0.00	0.00	0.00	4.92
3722	3840	3.807839	TGCCCGCCTGCACCATAT	61.808	61.111	0.00	0.00	36.04	1.78
4073	4193	4.680237	TTGACGCCGAGGCTGGTG	62.680	66.667	12.70	12.90	45.20	4.17
4143	4263	3.822192	CATGCCGAGGTCGACCGA	61.822	66.667	28.26	11.81	43.02	4.69
4145	4265	4.530857	CCCATGCCGAGGTCGACC	62.531	72.222	27.67	27.67	43.02	4.79
4148	4268	4.552365	ATGCCCATGCCGAGGTCG	62.552	66.667	0.00	0.00	36.33	4.79
4149	4269	2.903855	CATGCCCATGCCGAGGTC	60.904	66.667	0.00	0.00	36.33	3.85
4150	4270	4.511246	CCATGCCCATGCCGAGGT	62.511	66.667	2.75	0.00	37.49	3.85
4155	4275	3.936203	CATGCCCATGCCCATGCC	61.936	66.667	9.83	0.00	37.49	4.40
4157	4277	2.818841	CACATGCCCATGCCCATG	59.181	61.111	17.28	17.28	42.39	3.66
4158	4278	3.158648	GCACATGCCCATGCCCAT	61.159	61.111	8.11	0.00	42.39	4.00
4159	4279	3.986116	ATGCACATGCCCATGCCCA	62.986	57.895	8.11	6.13	42.39	5.36
4160	4280	3.158648	ATGCACATGCCCATGCCC	61.159	61.111	8.11	0.86	42.39	5.36
4161	4281	2.108157	CATGCACATGCCCATGCC	59.892	61.111	11.74	1.19	42.39	4.40
4162	4282	2.108157	CCATGCACATGCCCATGC	59.892	61.111	16.64	9.29	42.39	4.06
4163	4283	1.324005	TGTCCATGCACATGCCCATG	61.324	55.000	15.60	15.60	44.15	3.66
4164	4284	0.397957	ATGTCCATGCACATGCCCAT	60.398	50.000	0.18	6.33	41.18	4.00
4165	4285	1.000612	ATGTCCATGCACATGCCCA	59.999	52.632	0.18	4.35	41.18	5.36
4166	4286	1.440060	CATGTCCATGCACATGCCC	59.560	57.895	16.55	0.00	45.43	5.36
4170	4290	1.681264	CATGCTCATGTCCATGCACAT	59.319	47.619	0.00	0.00	38.29	3.21
4171	4291	1.099689	CATGCTCATGTCCATGCACA	58.900	50.000	12.83	0.00	38.29	4.57
4172	4292	3.938653	CATGCTCATGTCCATGCAC	57.061	52.632	12.83	0.00	38.29	4.57
4181	4301	7.011669	TCTGTGTTACATCATTACATGCTCATG	59.988	37.037	8.21	8.21	44.15	3.07
4182	4302	7.049754	TCTGTGTTACATCATTACATGCTCAT	58.950	34.615	0.00	0.00	0.00	2.90
4183	4303	6.405538	TCTGTGTTACATCATTACATGCTCA	58.594	36.000	0.00	0.00	0.00	4.26
4184	4304	6.908870	TCTGTGTTACATCATTACATGCTC	57.091	37.500	0.00	0.00	0.00	4.26
4185	4305	7.870509	ATTCTGTGTTACATCATTACATGCT	57.129	32.000	0.00	0.00	0.00	3.79
4226	4346	0.169230	AGCTCTCGCTACTCAACACG	59.831	55.000	0.00	0.00	46.79	4.49
4239	4362	2.106566	TCAACCTCATCCTCAGCTCTC	58.893	52.381	0.00	0.00	0.00	3.20
4240	4363	2.244486	TCAACCTCATCCTCAGCTCT	57.756	50.000	0.00	0.00	0.00	4.09
4281	4412	1.087501	CTAAGCAAAGAAGGCCCGAC	58.912	55.000	0.00	0.00	0.00	4.79
4343	4486	5.559227	TCATCGTGCTCGTTTTGATATTTG	58.441	37.500	8.17	0.00	38.33	2.32
4347	4490	4.429108	TCATCATCGTGCTCGTTTTGATA	58.571	39.130	16.98	8.60	38.33	2.15
4366	4509	9.995003	TGCTTCAAAAACCAAGTATTAATTCAT	57.005	25.926	0.00	0.00	0.00	2.57
4444	4587	1.414158	ATCCTGTATCCCTCACACGG	58.586	55.000	0.00	0.00	0.00	4.94
4457	4600	0.815734	GCTGCTGCATTCAATCCTGT	59.184	50.000	11.11	0.00	39.41	4.00
4492	4677	2.280552	GCCTGTCAGTCCGTGGGTA	61.281	63.158	0.00	0.00	0.00	3.69
4493	4678	3.626924	GCCTGTCAGTCCGTGGGT	61.627	66.667	0.00	0.00	0.00	4.51
4494	4679	4.394712	GGCCTGTCAGTCCGTGGG	62.395	72.222	0.00	0.00	0.00	4.61
4495	4680	3.625897	TGGCCTGTCAGTCCGTGG	61.626	66.667	3.32	0.00	0.00	4.94
4496	4681	2.357517	GTGGCCTGTCAGTCCGTG	60.358	66.667	3.32	0.00	0.00	4.94
4544	4729	2.036475	GACGACATATCAGGCAGGACAT	59.964	50.000	0.00	0.00	0.00	3.06
4562	4751	2.108362	GTAAGGGGCCCATCGACG	59.892	66.667	27.72	0.00	0.00	5.12
4578	4767	2.418368	ATGTACAATGTCCATGCCGT	57.582	45.000	0.00	0.00	0.00	5.68
4587	4776	7.452880	AACTGTGCTCAATTATGTACAATGT	57.547	32.000	0.00	0.00	0.00	2.71
4591	4780	5.182950	CCCAAACTGTGCTCAATTATGTACA	59.817	40.000	0.00	0.00	0.00	2.90
4592	4781	5.640732	CCCAAACTGTGCTCAATTATGTAC	58.359	41.667	0.00	0.00	0.00	2.90
4630	4819	3.103080	ACTGTAGCAAGCCCTACTACT	57.897	47.619	7.89	0.00	38.75	2.57
4631	4820	4.680702	GTTACTGTAGCAAGCCCTACTAC	58.319	47.826	7.89	0.00	38.75	2.73
4632	4821	3.379372	CGTTACTGTAGCAAGCCCTACTA	59.621	47.826	2.63	0.00	38.75	1.82
4652	4841	4.508128	CCCACGTAGCGGCATCGT	62.508	66.667	14.52	14.52	38.89	3.73
4709	4898	5.205056	GGATCCTTCCTCTTCTTCTACTCA	58.795	45.833	3.84	0.00	39.14	3.41
4711	4900	5.208121	CTGGATCCTTCCTCTTCTTCTACT	58.792	45.833	14.23	0.00	43.07	2.57
4712	4901	4.202212	GCTGGATCCTTCCTCTTCTTCTAC	60.202	50.000	14.23	0.00	43.07	2.59
4713	4902	3.964031	GCTGGATCCTTCCTCTTCTTCTA	59.036	47.826	14.23	0.00	43.07	2.10
4714	4903	2.771372	GCTGGATCCTTCCTCTTCTTCT	59.229	50.000	14.23	0.00	43.07	2.85
4715	4904	2.503356	TGCTGGATCCTTCCTCTTCTTC	59.497	50.000	14.23	0.00	43.07	2.87
4716	4905	2.504996	CTGCTGGATCCTTCCTCTTCTT	59.495	50.000	14.23	0.00	43.07	2.52
4761	4950	0.318955	CCGAAACAAAGGCAGGCAAG	60.319	55.000	0.00	0.00	0.00	4.01
4768	4957	3.181479	ACCTTTCTTTCCGAAACAAAGGC	60.181	43.478	27.60	0.00	44.80	4.35
4788	4977	2.352805	AGCCCAGCTGCACTAACC	59.647	61.111	8.66	0.00	37.57	2.85
4898	5088	1.377856	GAAAGACTGGAGCTGGGCC	60.378	63.158	0.00	0.00	0.00	5.80
4904	5094	2.147150	GTCTGGTTGAAAGACTGGAGC	58.853	52.381	0.00	0.00	40.77	4.70
4938	5128	5.480642	AGCTCTAGGATGGTGATATGTTG	57.519	43.478	0.00	0.00	0.00	3.33
4949	5139	3.650070	TGCACGAATAGCTCTAGGATG	57.350	47.619	0.00	0.00	0.00	3.51
4998	5188	3.502306	CGTGTTCGTGTTGTTGGTC	57.498	52.632	0.00	0.00	0.00	4.02
5062	5335	2.096069	CACCAAAGCGTGATGTGAGAAG	60.096	50.000	0.00	0.00	35.68	2.85
5075	5348	2.195922	CAAGTGCAAGAACACCAAAGC	58.804	47.619	0.00	0.00	41.67	3.51
5099	5372	1.836166	TGAGCCAAGATCTTCTGGGAG	59.164	52.381	14.10	0.00	40.15	4.30

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.