Multiple sequence alignment - TraesCS2A01G354500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G354500 chr2A 100.000 6373 0 0 1 6373 595346526 595340154 0.000000e+00 11769.0
1 TraesCS2A01G354500 chr2A 100.000 135 0 0 3478 3612 595342917 595342783 3.810000e-62 250.0
2 TraesCS2A01G354500 chr2A 100.000 135 0 0 3610 3744 595343049 595342915 3.810000e-62 250.0
3 TraesCS2A01G354500 chr2A 94.872 39 1 1 3574 3612 758555774 758555737 6.900000e-05 60.2
4 TraesCS2A01G354500 chr2B 89.299 2654 136 44 486 3079 534707199 534709764 0.000000e+00 3192.0
5 TraesCS2A01G354500 chr2B 95.890 1606 55 4 4173 5770 534711426 534713028 0.000000e+00 2590.0
6 TraesCS2A01G354500 chr2B 85.768 534 41 13 3066 3580 534710354 534710871 3.380000e-147 532.0
7 TraesCS2A01G354500 chr2B 92.733 344 23 2 3834 4175 534710856 534711199 4.440000e-136 496.0
8 TraesCS2A01G354500 chr2B 92.958 213 11 4 1 211 206682312 206682102 2.230000e-79 307.0
9 TraesCS2A01G354500 chr2B 90.583 223 12 4 250 464 534705563 534705784 2.910000e-73 287.0
10 TraesCS2A01G354500 chr2B 95.098 102 5 0 3611 3712 534710770 534710871 1.840000e-35 161.0
11 TraesCS2A01G354500 chr2B 100.000 32 0 0 3581 3612 761327526 761327495 6.900000e-05 60.2
12 TraesCS2A01G354500 chr2D 95.811 1647 54 7 4168 5802 454967970 454969613 0.000000e+00 2645.0
13 TraesCS2A01G354500 chr2D 89.675 1598 92 34 1999 3541 454965932 454967511 0.000000e+00 1969.0
14 TraesCS2A01G354500 chr2D 88.194 1440 79 47 250 1627 454964219 454965629 0.000000e+00 1633.0
15 TraesCS2A01G354500 chr2D 88.846 260 13 4 3917 4175 454967508 454967752 8.030000e-79 305.0
16 TraesCS2A01G354500 chr2D 95.745 141 6 0 1636 1776 454965735 454965875 1.790000e-55 228.0
17 TraesCS2A01G354500 chr2D 96.875 64 2 0 3610 3673 454967448 454967511 2.430000e-19 108.0
18 TraesCS2A01G354500 chr7B 98.780 574 7 0 5800 6373 479914802 479915375 0.000000e+00 1022.0
19 TraesCS2A01G354500 chr7B 95.050 202 8 2 1 201 59643747 59643947 3.710000e-82 316.0
20 TraesCS2A01G354500 chr7B 94.581 203 9 2 1 202 5257048 5256847 4.800000e-81 313.0
21 TraesCS2A01G354500 chr7B 97.727 132 2 1 3713 3843 198551187 198551056 6.430000e-55 226.0
22 TraesCS2A01G354500 chr7B 97.297 37 0 1 3576 3612 552119813 552119778 1.920000e-05 62.1
23 TraesCS2A01G354500 chr5A 91.812 574 36 3 5802 6373 523424096 523424660 0.000000e+00 789.0
24 TraesCS2A01G354500 chr5A 95.050 202 9 1 1 201 361183288 361183489 3.710000e-82 316.0
25 TraesCS2A01G354500 chr5A 99.206 126 1 0 3713 3838 664552906 664553031 1.790000e-55 228.0
26 TraesCS2A01G354500 chr6A 78.791 910 188 4 4461 5366 439296333 439295425 1.970000e-169 606.0
27 TraesCS2A01G354500 chr6A 81.560 423 69 8 1018 1431 439299821 439299399 2.200000e-89 340.0
28 TraesCS2A01G354500 chr6A 96.992 133 2 2 3713 3845 559732721 559732851 8.320000e-54 222.0
29 TraesCS2A01G354500 chr6A 84.848 99 13 2 1208 1305 11116153 11116056 1.460000e-16 99.0
30 TraesCS2A01G354500 chr6D 78.132 910 194 4 4461 5366 286785424 286786332 1.990000e-159 573.0
31 TraesCS2A01G354500 chr6D 81.149 435 72 9 1006 1431 286780929 286781362 2.200000e-89 340.0
32 TraesCS2A01G354500 chr6B 77.961 912 192 7 4461 5366 447661694 447662602 4.310000e-156 562.0
33 TraesCS2A01G354500 chr6B 81.922 437 72 6 1006 1436 447658346 447658781 4.700000e-96 363.0
34 TraesCS2A01G354500 chr6B 96.324 136 3 2 3713 3847 308522690 308522824 8.320000e-54 222.0
35 TraesCS2A01G354500 chr6B 97.368 38 0 1 3577 3613 250758158 250758195 5.330000e-06 63.9
36 TraesCS2A01G354500 chr3D 86.811 417 35 11 5808 6208 18947856 18947444 1.260000e-121 448.0
37 TraesCS2A01G354500 chr3D 87.938 257 31 0 5802 6058 609616806 609616550 2.890000e-78 303.0
38 TraesCS2A01G354500 chr3D 86.328 256 33 2 5803 6058 15154175 15153922 1.750000e-70 278.0
39 TraesCS2A01G354500 chr4D 85.343 423 42 13 5802 6208 407877351 407876933 2.750000e-113 420.0
40 TraesCS2A01G354500 chr1D 82.944 428 67 3 1011 1432 9272099 9272526 1.300000e-101 381.0
41 TraesCS2A01G354500 chr5B 96.040 202 6 2 1 201 181555978 181556178 1.710000e-85 327.0
42 TraesCS2A01G354500 chr5B 93.780 209 10 3 1 208 522895256 522895050 1.730000e-80 311.0
43 TraesCS2A01G354500 chr5B 97.222 36 0 1 3577 3612 566505803 566505769 6.900000e-05 60.2
44 TraesCS2A01G354500 chr3A 80.822 438 62 7 1025 1444 734526477 734526044 2.220000e-84 324.0
45 TraesCS2A01G354500 chr3A 95.025 201 10 0 1 201 458082814 458082614 3.710000e-82 316.0
46 TraesCS2A01G354500 chr3A 96.296 135 4 1 3713 3847 182633860 182633727 2.990000e-53 220.0
47 TraesCS2A01G354500 chr3A 93.182 44 1 2 3570 3612 387282114 387282156 5.330000e-06 63.9
48 TraesCS2A01G354500 chr3A 94.872 39 1 1 3574 3612 77542486 77542523 6.900000e-05 60.2
49 TraesCS2A01G354500 chr3A 89.130 46 4 1 3565 3610 18790629 18790673 8.930000e-04 56.5
50 TraesCS2A01G354500 chr1B 80.420 429 78 3 1011 1433 3269304 3269732 7.970000e-84 322.0
51 TraesCS2A01G354500 chr1B 76.796 362 79 5 5006 5365 3289420 3289778 1.400000e-46 198.0
52 TraesCS2A01G354500 chr1A 95.025 201 10 0 1 201 519573540 519573740 3.710000e-82 316.0
53 TraesCS2A01G354500 chr1A 88.327 257 30 0 5802 6058 97807017 97807273 6.210000e-80 309.0
54 TraesCS2A01G354500 chr1A 87.815 238 29 0 5802 6039 17735226 17735463 4.870000e-71 279.0
55 TraesCS2A01G354500 chr1A 100.000 123 0 0 3713 3835 515551359 515551481 1.790000e-55 228.0
56 TraesCS2A01G354500 chr1A 95.775 142 3 3 3713 3851 82525947 82526088 6.430000e-55 226.0
57 TraesCS2A01G354500 chr7D 88.716 257 29 0 5802 6058 335479057 335478801 1.330000e-81 315.0
58 TraesCS2A01G354500 chr7D 87.549 257 31 1 5802 6058 118341518 118341773 4.830000e-76 296.0
59 TraesCS2A01G354500 chrUn 94.975 199 10 0 1 199 50077388 50077190 4.800000e-81 313.0
60 TraesCS2A01G354500 chrUn 82.828 99 15 2 1208 1305 172237828 172237731 3.170000e-13 87.9
61 TraesCS2A01G354500 chr5D 88.583 254 29 0 5802 6055 276932058 276932311 6.210000e-80 309.0
62 TraesCS2A01G354500 chr7A 87.938 257 31 0 5802 6058 347110841 347111097 2.890000e-78 303.0
63 TraesCS2A01G354500 chr7A 78.140 215 33 9 5231 5437 654210141 654210349 2.410000e-24 124.0
64 TraesCS2A01G354500 chr4B 100.000 122 0 0 3713 3834 128540734 128540855 6.430000e-55 226.0
65 TraesCS2A01G354500 chr4B 98.450 129 0 2 3713 3841 648316479 648316353 6.430000e-55 226.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G354500 chr2A 595340154 595346526 6372 True 4089.666667 11769 100.000000 1 6373 3 chr2A.!!$R2 6372
1 TraesCS2A01G354500 chr2B 534705563 534713028 7465 False 1209.666667 3192 91.561833 250 5770 6 chr2B.!!$F1 5520
2 TraesCS2A01G354500 chr2D 454964219 454969613 5394 False 1148.000000 2645 92.524333 250 5802 6 chr2D.!!$F1 5552
3 TraesCS2A01G354500 chr7B 479914802 479915375 573 False 1022.000000 1022 98.780000 5800 6373 1 chr7B.!!$F2 573
4 TraesCS2A01G354500 chr5A 523424096 523424660 564 False 789.000000 789 91.812000 5802 6373 1 chr5A.!!$F2 571
5 TraesCS2A01G354500 chr6A 439295425 439299821 4396 True 473.000000 606 80.175500 1018 5366 2 chr6A.!!$R2 4348
6 TraesCS2A01G354500 chr6D 286785424 286786332 908 False 573.000000 573 78.132000 4461 5366 1 chr6D.!!$F2 905
7 TraesCS2A01G354500 chr6B 447658346 447662602 4256 False 462.500000 562 79.941500 1006 5366 2 chr6B.!!$F3 4360

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 226 0.030638 TTCTCTTTGCGGCTTGTTGC 59.969 50.000 0.00 0.00 41.94 4.17 F
234 235 0.249405 CGGCTTGTTGCAACCACAAT 60.249 50.000 26.14 0.00 45.15 2.71 F
630 2052 0.457035 CCCATCTGCCAAACAATCCG 59.543 55.000 0.00 0.00 0.00 4.18 F
889 2331 1.070445 CCGCAGATCTGATCCACCC 59.930 63.158 27.04 5.56 0.00 4.61 F
1978 5320 0.387239 CTGCGCTTTGTTAACTGGGC 60.387 55.000 9.73 20.01 38.56 5.36 F
2271 5667 0.877743 GCCTGTTGAACCTTCTGAGC 59.122 55.000 0.00 0.00 0.00 4.26 F
3391 7425 0.943673 TGCGTTTGTGTGACATCCTG 59.056 50.000 0.00 0.00 0.00 3.86 F
3756 7807 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67 F
3757 7808 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73 F
3783 7834 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1479 2958 0.318120 GTCCCTTACGTTTCCGTCCA 59.682 55.000 0.00 0.0 46.28 4.02 R
1510 3071 0.606096 TCGCGTTCCTCATCCAGAAA 59.394 50.000 5.77 0.0 0.00 2.52 R
1514 3075 1.080093 GTGTCGCGTTCCTCATCCA 60.080 57.895 5.77 0.0 0.00 3.41 R
2306 5702 1.263356 CTAGAAGGTGGACCCGTGAA 58.737 55.000 0.00 0.0 38.74 3.18 R
3737 7788 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.0 0.00 2.74 R
3738 7789 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.0 0.00 3.18 R
4842 9467 0.240678 CGCCAAACATGTGCAGCTAA 59.759 50.000 0.00 0.0 0.00 3.09 R
4887 9512 0.467290 TTGGTGGGTTGTTCAGGAGC 60.467 55.000 0.00 0.0 0.00 4.70 R
5330 9955 2.027377 CCTGAACTTCTCCATGTGCTCT 60.027 50.000 0.00 0.0 0.00 4.09 R
5770 10402 0.677731 CACGTACCTCCTCCCACGTA 60.678 60.000 0.00 0.0 45.09 3.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.731275 AACATAAGTATAGTAACATGCAAGCA 57.269 30.769 0.00 0.00 0.00 3.91
32 33 8.908786 ACATAAGTATAGTAACATGCAAGCAT 57.091 30.769 0.86 0.86 37.08 3.79
33 34 9.342308 ACATAAGTATAGTAACATGCAAGCATT 57.658 29.630 4.52 0.00 33.90 3.56
34 35 9.817365 CATAAGTATAGTAACATGCAAGCATTC 57.183 33.333 4.52 0.00 33.90 2.67
35 36 7.864108 AAGTATAGTAACATGCAAGCATTCA 57.136 32.000 4.52 0.00 33.90 2.57
36 37 8.455903 AAGTATAGTAACATGCAAGCATTCAT 57.544 30.769 4.52 0.00 33.90 2.57
37 38 8.455903 AGTATAGTAACATGCAAGCATTCATT 57.544 30.769 4.52 3.38 33.90 2.57
38 39 8.906867 AGTATAGTAACATGCAAGCATTCATTT 58.093 29.630 4.52 0.00 33.90 2.32
43 44 9.740239 AGTAACATGCAAGCATTCATTTATTAG 57.260 29.630 4.52 0.00 33.90 1.73
44 45 8.971321 GTAACATGCAAGCATTCATTTATTAGG 58.029 33.333 4.52 0.00 33.90 2.69
45 46 7.116075 ACATGCAAGCATTCATTTATTAGGT 57.884 32.000 4.52 0.00 33.90 3.08
46 47 7.558604 ACATGCAAGCATTCATTTATTAGGTT 58.441 30.769 4.52 0.00 33.90 3.50
47 48 8.694540 ACATGCAAGCATTCATTTATTAGGTTA 58.305 29.630 4.52 0.00 33.90 2.85
48 49 9.701098 CATGCAAGCATTCATTTATTAGGTTAT 57.299 29.630 4.52 0.00 33.90 1.89
66 67 9.778741 TTAGGTTATAGACTCATATTGCTTTGG 57.221 33.333 0.00 0.00 0.00 3.28
67 68 7.227156 AGGTTATAGACTCATATTGCTTTGGG 58.773 38.462 0.00 0.00 0.00 4.12
68 69 7.072454 AGGTTATAGACTCATATTGCTTTGGGA 59.928 37.037 0.00 0.00 0.00 4.37
69 70 7.173390 GGTTATAGACTCATATTGCTTTGGGAC 59.827 40.741 0.00 0.00 0.00 4.46
70 71 4.574674 AGACTCATATTGCTTTGGGACA 57.425 40.909 0.00 0.00 0.00 4.02
71 72 5.121380 AGACTCATATTGCTTTGGGACAT 57.879 39.130 0.00 0.00 39.30 3.06
72 73 4.885907 AGACTCATATTGCTTTGGGACATG 59.114 41.667 0.00 0.00 39.30 3.21
73 74 4.603131 ACTCATATTGCTTTGGGACATGT 58.397 39.130 0.00 0.00 39.30 3.21
74 75 4.400251 ACTCATATTGCTTTGGGACATGTG 59.600 41.667 1.15 0.00 39.30 3.21
75 76 4.598022 TCATATTGCTTTGGGACATGTGA 58.402 39.130 1.15 0.00 39.30 3.58
76 77 5.202765 TCATATTGCTTTGGGACATGTGAT 58.797 37.500 1.15 0.00 39.30 3.06
77 78 3.880047 ATTGCTTTGGGACATGTGATG 57.120 42.857 1.15 0.00 39.30 3.07
79 80 2.596346 TGCTTTGGGACATGTGATGTT 58.404 42.857 1.15 0.00 45.03 2.71
80 81 3.760738 TGCTTTGGGACATGTGATGTTA 58.239 40.909 1.15 0.00 45.03 2.41
81 82 3.505680 TGCTTTGGGACATGTGATGTTAC 59.494 43.478 1.15 0.00 45.03 2.50
82 83 3.505680 GCTTTGGGACATGTGATGTTACA 59.494 43.478 1.15 0.00 45.03 2.41
83 84 4.379813 GCTTTGGGACATGTGATGTTACAG 60.380 45.833 1.15 0.00 45.03 2.74
84 85 4.365514 TTGGGACATGTGATGTTACAGT 57.634 40.909 1.15 0.00 45.03 3.55
85 86 5.491323 TTGGGACATGTGATGTTACAGTA 57.509 39.130 1.15 0.00 45.03 2.74
86 87 5.491323 TGGGACATGTGATGTTACAGTAA 57.509 39.130 1.15 0.00 45.03 2.24
87 88 5.242434 TGGGACATGTGATGTTACAGTAAC 58.758 41.667 15.58 15.58 45.03 2.50
88 89 5.012664 TGGGACATGTGATGTTACAGTAACT 59.987 40.000 21.56 9.41 45.03 2.24
89 90 6.211785 TGGGACATGTGATGTTACAGTAACTA 59.788 38.462 21.56 10.50 45.03 2.24
90 91 6.757010 GGGACATGTGATGTTACAGTAACTAG 59.243 42.308 21.56 8.25 45.03 2.57
91 92 6.255887 GGACATGTGATGTTACAGTAACTAGC 59.744 42.308 21.56 12.59 45.03 3.42
92 93 6.936279 ACATGTGATGTTACAGTAACTAGCT 58.064 36.000 21.56 6.57 41.63 3.32
93 94 8.063200 ACATGTGATGTTACAGTAACTAGCTA 57.937 34.615 21.56 4.25 41.63 3.32
94 95 8.528643 ACATGTGATGTTACAGTAACTAGCTAA 58.471 33.333 21.56 3.59 41.63 3.09
95 96 9.025020 CATGTGATGTTACAGTAACTAGCTAAG 57.975 37.037 21.56 6.36 39.38 2.18
96 97 8.118976 TGTGATGTTACAGTAACTAGCTAAGT 57.881 34.615 21.56 0.00 41.49 2.24
131 132 9.638239 CTATCTCTCTCCTTATTAACTCATTGC 57.362 37.037 0.00 0.00 0.00 3.56
132 133 6.821388 TCTCTCTCCTTATTAACTCATTGCC 58.179 40.000 0.00 0.00 0.00 4.52
133 134 6.384015 TCTCTCTCCTTATTAACTCATTGCCA 59.616 38.462 0.00 0.00 0.00 4.92
134 135 6.349300 TCTCTCCTTATTAACTCATTGCCAC 58.651 40.000 0.00 0.00 0.00 5.01
135 136 6.061022 TCTCCTTATTAACTCATTGCCACA 57.939 37.500 0.00 0.00 0.00 4.17
136 137 6.662755 TCTCCTTATTAACTCATTGCCACAT 58.337 36.000 0.00 0.00 0.00 3.21
137 138 7.801104 TCTCCTTATTAACTCATTGCCACATA 58.199 34.615 0.00 0.00 0.00 2.29
138 139 8.271458 TCTCCTTATTAACTCATTGCCACATAA 58.729 33.333 0.00 0.00 0.00 1.90
139 140 8.450578 TCCTTATTAACTCATTGCCACATAAG 57.549 34.615 0.00 0.00 0.00 1.73
140 141 7.013274 TCCTTATTAACTCATTGCCACATAAGC 59.987 37.037 0.00 0.00 0.00 3.09
141 142 7.201812 CCTTATTAACTCATTGCCACATAAGCA 60.202 37.037 0.00 0.00 38.81 3.91
172 173 5.564048 GAGTTGGACTCGATGTTACTACT 57.436 43.478 0.00 0.00 35.28 2.57
173 174 5.312120 AGTTGGACTCGATGTTACTACTG 57.688 43.478 0.00 0.00 0.00 2.74
174 175 5.008331 AGTTGGACTCGATGTTACTACTGA 58.992 41.667 0.00 0.00 0.00 3.41
175 176 5.475909 AGTTGGACTCGATGTTACTACTGAA 59.524 40.000 0.00 0.00 0.00 3.02
176 177 5.970317 TGGACTCGATGTTACTACTGAAA 57.030 39.130 0.00 0.00 0.00 2.69
177 178 6.525578 TGGACTCGATGTTACTACTGAAAT 57.474 37.500 0.00 0.00 0.00 2.17
178 179 6.931838 TGGACTCGATGTTACTACTGAAATT 58.068 36.000 0.00 0.00 0.00 1.82
179 180 8.058667 TGGACTCGATGTTACTACTGAAATTA 57.941 34.615 0.00 0.00 0.00 1.40
180 181 7.972277 TGGACTCGATGTTACTACTGAAATTAC 59.028 37.037 0.00 0.00 0.00 1.89
181 182 8.189460 GGACTCGATGTTACTACTGAAATTACT 58.811 37.037 0.00 0.00 0.00 2.24
182 183 9.224058 GACTCGATGTTACTACTGAAATTACTC 57.776 37.037 0.00 0.00 0.00 2.59
183 184 8.189460 ACTCGATGTTACTACTGAAATTACTCC 58.811 37.037 0.00 0.00 0.00 3.85
184 185 7.486647 TCGATGTTACTACTGAAATTACTCCC 58.513 38.462 0.00 0.00 0.00 4.30
185 186 7.123098 TCGATGTTACTACTGAAATTACTCCCA 59.877 37.037 0.00 0.00 0.00 4.37
186 187 7.222224 CGATGTTACTACTGAAATTACTCCCAC 59.778 40.741 0.00 0.00 0.00 4.61
187 188 7.549147 TGTTACTACTGAAATTACTCCCACT 57.451 36.000 0.00 0.00 0.00 4.00
188 189 7.383687 TGTTACTACTGAAATTACTCCCACTG 58.616 38.462 0.00 0.00 0.00 3.66
189 190 7.015877 TGTTACTACTGAAATTACTCCCACTGT 59.984 37.037 0.00 0.00 0.00 3.55
190 191 5.794894 ACTACTGAAATTACTCCCACTGTG 58.205 41.667 0.00 0.00 0.00 3.66
191 192 4.974645 ACTGAAATTACTCCCACTGTGA 57.025 40.909 9.86 0.00 0.00 3.58
192 193 4.642429 ACTGAAATTACTCCCACTGTGAC 58.358 43.478 9.86 0.00 0.00 3.67
193 194 4.348168 ACTGAAATTACTCCCACTGTGACT 59.652 41.667 9.86 0.00 0.00 3.41
194 195 5.542635 ACTGAAATTACTCCCACTGTGACTA 59.457 40.000 9.86 0.00 0.00 2.59
195 196 6.037786 TGAAATTACTCCCACTGTGACTAG 57.962 41.667 9.86 5.97 0.00 2.57
196 197 5.542635 TGAAATTACTCCCACTGTGACTAGT 59.457 40.000 9.86 11.33 0.00 2.57
197 198 5.662674 AATTACTCCCACTGTGACTAGTC 57.337 43.478 16.32 16.32 0.00 2.59
198 199 2.982339 ACTCCCACTGTGACTAGTCT 57.018 50.000 23.01 0.19 0.00 3.24
199 200 5.509832 TTACTCCCACTGTGACTAGTCTA 57.490 43.478 23.01 11.56 0.00 2.59
200 201 4.383931 ACTCCCACTGTGACTAGTCTAA 57.616 45.455 23.01 10.61 0.00 2.10
201 202 4.080687 ACTCCCACTGTGACTAGTCTAAC 58.919 47.826 23.01 14.37 0.00 2.34
202 203 3.428532 TCCCACTGTGACTAGTCTAACC 58.571 50.000 23.01 9.40 0.00 2.85
203 204 3.162666 CCCACTGTGACTAGTCTAACCA 58.837 50.000 23.01 13.00 0.00 3.67
204 205 3.056749 CCCACTGTGACTAGTCTAACCAC 60.057 52.174 23.01 13.58 0.00 4.16
205 206 3.572682 CCACTGTGACTAGTCTAACCACA 59.427 47.826 23.01 17.11 36.47 4.17
206 207 4.220821 CCACTGTGACTAGTCTAACCACAT 59.779 45.833 23.01 7.37 37.17 3.21
207 208 5.279506 CCACTGTGACTAGTCTAACCACATT 60.280 44.000 23.01 10.80 37.17 2.71
208 209 5.864474 CACTGTGACTAGTCTAACCACATTC 59.136 44.000 23.01 0.00 37.17 2.67
209 210 5.775701 ACTGTGACTAGTCTAACCACATTCT 59.224 40.000 23.01 3.40 37.17 2.40
210 211 6.071840 ACTGTGACTAGTCTAACCACATTCTC 60.072 42.308 23.01 0.00 37.17 2.87
211 212 6.010850 TGTGACTAGTCTAACCACATTCTCT 58.989 40.000 23.01 0.00 33.42 3.10
212 213 6.493802 TGTGACTAGTCTAACCACATTCTCTT 59.506 38.462 23.01 0.00 33.42 2.85
213 214 7.015292 TGTGACTAGTCTAACCACATTCTCTTT 59.985 37.037 23.01 0.00 33.42 2.52
214 215 7.329717 GTGACTAGTCTAACCACATTCTCTTTG 59.670 40.741 23.01 0.00 0.00 2.77
215 216 6.166982 ACTAGTCTAACCACATTCTCTTTGC 58.833 40.000 0.00 0.00 0.00 3.68
216 217 3.997021 AGTCTAACCACATTCTCTTTGCG 59.003 43.478 0.00 0.00 0.00 4.85
217 218 3.125316 GTCTAACCACATTCTCTTTGCGG 59.875 47.826 0.00 0.00 0.00 5.69
218 219 0.598065 AACCACATTCTCTTTGCGGC 59.402 50.000 0.00 0.00 0.00 6.53
219 220 0.250901 ACCACATTCTCTTTGCGGCT 60.251 50.000 0.00 0.00 0.00 5.52
220 221 0.883833 CCACATTCTCTTTGCGGCTT 59.116 50.000 0.00 0.00 0.00 4.35
221 222 1.401931 CCACATTCTCTTTGCGGCTTG 60.402 52.381 0.00 0.00 0.00 4.01
222 223 1.267806 CACATTCTCTTTGCGGCTTGT 59.732 47.619 0.00 0.00 0.00 3.16
223 224 1.956477 ACATTCTCTTTGCGGCTTGTT 59.044 42.857 0.00 0.00 0.00 2.83
224 225 2.287788 ACATTCTCTTTGCGGCTTGTTG 60.288 45.455 0.00 0.00 0.00 3.33
225 226 0.030638 TTCTCTTTGCGGCTTGTTGC 59.969 50.000 0.00 0.00 41.94 4.17
226 227 1.100463 TCTCTTTGCGGCTTGTTGCA 61.100 50.000 0.00 0.00 45.15 4.08
229 230 2.105930 TTGCGGCTTGTTGCAACC 59.894 55.556 26.14 10.37 45.45 3.77
230 231 2.714991 TTGCGGCTTGTTGCAACCA 61.715 52.632 26.14 15.11 45.45 3.67
231 232 2.658268 GCGGCTTGTTGCAACCAC 60.658 61.111 26.14 14.98 45.15 4.16
232 233 2.804167 CGGCTTGTTGCAACCACA 59.196 55.556 26.14 6.35 45.15 4.17
233 234 1.140589 CGGCTTGTTGCAACCACAA 59.859 52.632 26.14 14.15 45.15 3.33
234 235 0.249405 CGGCTTGTTGCAACCACAAT 60.249 50.000 26.14 0.00 45.15 2.71
235 236 1.805871 CGGCTTGTTGCAACCACAATT 60.806 47.619 26.14 0.00 45.15 2.32
236 237 1.598601 GGCTTGTTGCAACCACAATTG 59.401 47.619 26.14 3.24 45.15 2.32
237 238 2.278854 GCTTGTTGCAACCACAATTGT 58.721 42.857 26.14 4.92 42.31 2.71
238 239 2.030701 GCTTGTTGCAACCACAATTGTG 59.969 45.455 28.18 28.18 42.57 3.33
239 240 4.228356 GCTTGTTGCAACCACAATTGTGA 61.228 43.478 34.76 15.50 44.18 3.58
240 241 5.505932 GCTTGTTGCAACCACAATTGTGAT 61.506 41.667 34.76 20.25 44.18 3.06
241 242 7.246889 GCTTGTTGCAACCACAATTGTGATC 62.247 44.000 34.76 20.99 44.18 2.92
437 452 1.855513 CCGTAACAGTCACGTTGGAA 58.144 50.000 0.00 0.00 37.71 3.53
450 465 1.443802 GTTGGAAGAAGGAGAAGCCG 58.556 55.000 0.00 0.00 43.43 5.52
465 1856 3.057806 AGAAGCCGTTTTTAACCATTCCG 60.058 43.478 0.00 0.00 0.00 4.30
469 1860 2.413108 CCGTTTTTAACCATTCCGTCCG 60.413 50.000 0.00 0.00 0.00 4.79
626 2048 1.804396 CGTGCCCATCTGCCAAACAA 61.804 55.000 0.00 0.00 0.00 2.83
630 2052 0.457035 CCCATCTGCCAAACAATCCG 59.543 55.000 0.00 0.00 0.00 4.18
889 2331 1.070445 CCGCAGATCTGATCCACCC 59.930 63.158 27.04 5.56 0.00 4.61
890 2332 1.300465 CGCAGATCTGATCCACCCG 60.300 63.158 27.04 13.93 0.00 5.28
918 2360 3.702048 CGTCCGCCCCTCTTCCAA 61.702 66.667 0.00 0.00 0.00 3.53
946 2409 2.063266 CGCCGCGCCTCTATTATTTTA 58.937 47.619 0.00 0.00 0.00 1.52
1392 2867 4.233635 CCCGCCGTCGACTACTCG 62.234 72.222 14.70 10.73 41.65 4.18
1473 2952 6.810182 CGTGCTACTACTACCAGTTACAATTT 59.190 38.462 0.00 0.00 0.00 1.82
1477 2956 7.277319 GCTACTACTACCAGTTACAATTTGTCC 59.723 40.741 5.07 0.00 0.00 4.02
1479 2958 5.578157 ACTACCAGTTACAATTTGTCCCT 57.422 39.130 5.07 0.34 0.00 4.20
1482 3043 3.139397 ACCAGTTACAATTTGTCCCTGGA 59.861 43.478 32.93 8.35 44.56 3.86
1509 3070 1.134560 CGTAAGGGACCAGTCTGTAGC 59.865 57.143 0.00 0.00 0.00 3.58
1510 3071 2.458620 GTAAGGGACCAGTCTGTAGCT 58.541 52.381 0.00 0.00 0.00 3.32
1512 3073 2.031495 AGGGACCAGTCTGTAGCTTT 57.969 50.000 0.00 0.00 0.00 3.51
1514 3075 1.903183 GGGACCAGTCTGTAGCTTTCT 59.097 52.381 0.00 0.00 0.00 2.52
1518 3079 3.177228 ACCAGTCTGTAGCTTTCTGGAT 58.823 45.455 20.71 8.96 45.76 3.41
1540 3101 0.863144 GGAACGCGACACTGCTTTAA 59.137 50.000 15.93 0.00 0.00 1.52
1550 3111 3.549299 CACTGCTTTAAGTGGCTTCAG 57.451 47.619 0.00 0.00 43.22 3.02
1620 3198 3.573967 GACCCTTGTTTGGATGTGTTGAT 59.426 43.478 0.00 0.00 0.00 2.57
1627 3205 6.402456 TGTTTGGATGTGTTGATTTGATCA 57.598 33.333 0.00 0.00 37.55 2.92
1628 3206 6.215121 TGTTTGGATGTGTTGATTTGATCAC 58.785 36.000 0.00 0.00 39.39 3.06
1630 3208 4.665451 TGGATGTGTTGATTTGATCACCT 58.335 39.130 0.00 0.00 39.39 4.00
1638 3321 3.753815 TGATTTGATCACCTGTTCAGCA 58.246 40.909 0.00 0.00 33.59 4.41
1753 5095 1.214424 TGGGGTCTATTTTAGGCTGGC 59.786 52.381 0.00 0.00 0.00 4.85
1792 5134 5.236695 GGAAGACTCGGTTATAATTGCTTCC 59.763 44.000 0.00 0.00 41.18 3.46
1797 5139 5.236478 ACTCGGTTATAATTGCTTCCGAATG 59.764 40.000 12.14 6.09 44.68 2.67
1840 5182 3.264104 GGTGAATGCCCATTGAAATGTG 58.736 45.455 0.00 0.00 34.60 3.21
1842 5184 4.317488 GTGAATGCCCATTGAAATGTGTT 58.683 39.130 0.00 0.00 34.60 3.32
1859 5201 2.490115 GTGTTGTGTGGTTCACCTTCAA 59.510 45.455 0.00 0.00 45.61 2.69
1875 5217 9.905713 TTCACCTTCAATAGATAAATAACTGCT 57.094 29.630 0.00 0.00 0.00 4.24
1973 5315 2.223377 AGTACAGCTGCGCTTTGTTAAC 59.777 45.455 15.27 6.63 36.40 2.01
1978 5320 0.387239 CTGCGCTTTGTTAACTGGGC 60.387 55.000 9.73 20.01 38.56 5.36
2010 5368 7.513190 AGAAGTTTTCGACTCTTTGATATCG 57.487 36.000 0.00 0.00 37.72 2.92
2112 5503 5.913946 ACTAGGGCCTTATAGCTCATTTT 57.086 39.130 13.45 0.00 34.85 1.82
2271 5667 0.877743 GCCTGTTGAACCTTCTGAGC 59.122 55.000 0.00 0.00 0.00 4.26
2284 5680 4.228210 ACCTTCTGAGCCATTCCTTTGATA 59.772 41.667 0.00 0.00 0.00 2.15
2306 5702 5.495926 AGAGATTGGAGACACAATTCAGT 57.504 39.130 0.00 0.00 40.92 3.41
2310 5706 5.471456 AGATTGGAGACACAATTCAGTTCAC 59.529 40.000 0.00 0.00 40.92 3.18
2333 5729 3.133183 GGGTCCACCTTCTAGTGATCTTC 59.867 52.174 0.00 0.00 40.34 2.87
2354 5750 3.055719 ACCTGCCATTTCGTGCCG 61.056 61.111 0.00 0.00 0.00 5.69
2363 5759 3.199677 CCATTTCGTGCCGGAATAGTAA 58.800 45.455 5.05 0.00 32.22 2.24
2376 5772 4.686122 CGGAATAGTAAACTGGGATTGGCT 60.686 45.833 0.00 0.00 0.00 4.75
2437 5852 6.407202 CAAAAGGACATAGTAGTAGCAACCT 58.593 40.000 0.00 0.00 0.00 3.50
2503 5918 5.742063 AGTTATGAGCCACTAACCCTTTAC 58.258 41.667 0.00 0.00 0.00 2.01
2506 5921 2.570302 TGAGCCACTAACCCTTTACCTC 59.430 50.000 0.00 0.00 0.00 3.85
2767 6196 6.549364 TGTTCCATGTGACAACCTCTATTTTT 59.451 34.615 0.00 0.00 0.00 1.94
2863 6292 1.886542 GGTGGCAGGTTGACTTTTAGG 59.113 52.381 0.00 0.00 0.00 2.69
2871 6300 4.520492 CAGGTTGACTTTTAGGATTGCTGT 59.480 41.667 0.00 0.00 0.00 4.40
2940 6369 9.394477 CAAGGCTTATACAACAAAAGTTCTAAC 57.606 33.333 0.00 0.00 0.00 2.34
3008 6437 9.699703 TTTTAAAGAATTGGGGAATTAAGAACG 57.300 29.630 0.00 0.00 0.00 3.95
3127 7159 7.855904 ACTTCTTGAGTAAATTAAACTGCAACG 59.144 33.333 0.00 0.00 36.65 4.10
3176 7208 9.326413 CCATTTCCGAGTTTTAGACTGTTATAT 57.674 33.333 0.00 0.00 39.19 0.86
3178 7210 9.886132 ATTTCCGAGTTTTAGACTGTTATATGT 57.114 29.630 0.00 0.00 39.19 2.29
3183 7216 8.808529 CGAGTTTTAGACTGTTATATGTGAAGG 58.191 37.037 0.00 0.00 39.19 3.46
3247 7281 7.540474 TTATGGAGAAAGCTACCCTACATAG 57.460 40.000 12.04 0.00 35.74 2.23
3264 7298 8.867097 CCCTACATAGTAGCCTCAGTTTTATTA 58.133 37.037 0.00 0.00 0.00 0.98
3305 7339 4.093472 TGCACCAACACCAAGTACTTAT 57.907 40.909 8.04 0.00 0.00 1.73
3353 7387 7.391554 CACTTCCAACTTCATATGAAAAGAGGA 59.608 37.037 23.97 20.81 33.07 3.71
3365 7399 5.772825 TGAAAAGAGGATGTTGGTTCTTG 57.227 39.130 0.00 0.00 30.77 3.02
3391 7425 0.943673 TGCGTTTGTGTGACATCCTG 59.056 50.000 0.00 0.00 0.00 3.86
3548 7599 4.134563 AGTAACACGTTTGGAGCTTGAAT 58.865 39.130 0.00 0.00 0.00 2.57
3553 7604 6.811253 ACACGTTTGGAGCTTGAATAATAA 57.189 33.333 0.00 0.00 0.00 1.40
3558 7609 9.705290 ACGTTTGGAGCTTGAATAATAATTTTT 57.295 25.926 0.00 0.00 0.00 1.94
3585 7636 9.955102 TGATCATATTTATCTTCTCATTCCTGG 57.045 33.333 0.00 0.00 0.00 4.45
3604 7655 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
3605 7656 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
3606 7657 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
3607 7658 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
3608 7659 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
3609 7660 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
3610 7661 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
3611 7662 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
3612 7663 3.456277 AGCCTCTTACAGAAATGTAGGGG 59.544 47.826 0.00 0.00 0.00 4.79
3613 7664 3.200165 GCCTCTTACAGAAATGTAGGGGT 59.800 47.826 0.00 0.00 0.00 4.95
3614 7665 4.770795 CCTCTTACAGAAATGTAGGGGTG 58.229 47.826 0.00 0.00 0.00 4.61
3615 7666 4.225267 CCTCTTACAGAAATGTAGGGGTGT 59.775 45.833 0.00 0.00 0.00 4.16
3616 7667 5.280521 CCTCTTACAGAAATGTAGGGGTGTT 60.281 44.000 0.00 0.00 0.00 3.32
3617 7668 6.070424 CCTCTTACAGAAATGTAGGGGTGTTA 60.070 42.308 0.00 0.00 0.00 2.41
3618 7669 6.704310 TCTTACAGAAATGTAGGGGTGTTAC 58.296 40.000 0.00 0.00 0.00 2.50
3619 7670 4.986054 ACAGAAATGTAGGGGTGTTACA 57.014 40.909 0.00 0.00 35.66 2.41
3620 7671 5.313280 ACAGAAATGTAGGGGTGTTACAA 57.687 39.130 0.00 0.00 34.92 2.41
3621 7672 5.887754 ACAGAAATGTAGGGGTGTTACAAT 58.112 37.500 0.00 0.00 34.92 2.71
3622 7673 6.311735 ACAGAAATGTAGGGGTGTTACAATT 58.688 36.000 0.00 0.00 34.92 2.32
3623 7674 6.780522 ACAGAAATGTAGGGGTGTTACAATTT 59.219 34.615 0.00 0.00 34.92 1.82
3624 7675 7.090173 CAGAAATGTAGGGGTGTTACAATTTG 58.910 38.462 0.00 0.00 34.92 2.32
3625 7676 6.780522 AGAAATGTAGGGGTGTTACAATTTGT 59.219 34.615 7.30 7.30 34.92 2.83
3626 7677 6.584185 AATGTAGGGGTGTTACAATTTGTC 57.416 37.500 5.07 0.00 34.92 3.18
3627 7678 4.400120 TGTAGGGGTGTTACAATTTGTCC 58.600 43.478 5.07 0.89 0.00 4.02
3628 7679 2.884320 AGGGGTGTTACAATTTGTCCC 58.116 47.619 13.26 13.26 31.78 4.46
3629 7680 2.178106 AGGGGTGTTACAATTTGTCCCA 59.822 45.455 20.01 10.36 33.62 4.37
3630 7681 2.297880 GGGGTGTTACAATTTGTCCCAC 59.702 50.000 20.01 18.47 33.62 4.61
3631 7682 3.227614 GGGTGTTACAATTTGTCCCACT 58.772 45.455 21.26 0.00 32.58 4.00
3632 7683 3.005367 GGGTGTTACAATTTGTCCCACTG 59.995 47.826 21.26 0.00 32.58 3.66
3633 7684 3.886505 GGTGTTACAATTTGTCCCACTGA 59.113 43.478 21.26 0.00 33.93 3.41
3634 7685 4.339814 GGTGTTACAATTTGTCCCACTGAA 59.660 41.667 21.26 3.92 33.93 3.02
3635 7686 5.507315 GGTGTTACAATTTGTCCCACTGAAG 60.507 44.000 21.26 0.00 33.93 3.02
3636 7687 4.037446 TGTTACAATTTGTCCCACTGAAGC 59.963 41.667 5.07 0.00 0.00 3.86
3637 7688 2.949447 ACAATTTGTCCCACTGAAGCT 58.051 42.857 0.00 0.00 0.00 3.74
3638 7689 4.098914 ACAATTTGTCCCACTGAAGCTA 57.901 40.909 0.00 0.00 0.00 3.32
3639 7690 3.821033 ACAATTTGTCCCACTGAAGCTAC 59.179 43.478 0.00 0.00 0.00 3.58
3640 7691 3.788227 ATTTGTCCCACTGAAGCTACA 57.212 42.857 0.00 0.00 0.00 2.74
3641 7692 3.569194 TTTGTCCCACTGAAGCTACAA 57.431 42.857 0.00 0.00 0.00 2.41
3642 7693 3.788227 TTGTCCCACTGAAGCTACAAT 57.212 42.857 0.00 0.00 0.00 2.71
3643 7694 3.334583 TGTCCCACTGAAGCTACAATC 57.665 47.619 0.00 0.00 0.00 2.67
3644 7695 2.906389 TGTCCCACTGAAGCTACAATCT 59.094 45.455 0.00 0.00 0.00 2.40
3645 7696 3.327757 TGTCCCACTGAAGCTACAATCTT 59.672 43.478 0.00 0.00 0.00 2.40
3646 7697 3.686726 GTCCCACTGAAGCTACAATCTTG 59.313 47.826 0.00 0.00 0.00 3.02
3647 7698 3.327757 TCCCACTGAAGCTACAATCTTGT 59.672 43.478 0.69 0.69 44.86 3.16
3648 7699 4.530553 TCCCACTGAAGCTACAATCTTGTA 59.469 41.667 3.00 3.00 42.35 2.41
3649 7700 5.189736 TCCCACTGAAGCTACAATCTTGTAT 59.810 40.000 3.40 0.00 42.26 2.29
3650 7701 5.882557 CCCACTGAAGCTACAATCTTGTATT 59.117 40.000 3.40 0.00 42.26 1.89
3651 7702 6.183360 CCCACTGAAGCTACAATCTTGTATTG 60.183 42.308 3.40 0.00 42.26 1.90
3652 7703 6.372659 CCACTGAAGCTACAATCTTGTATTGT 59.627 38.462 8.30 8.30 42.26 2.71
3653 7704 7.094634 CCACTGAAGCTACAATCTTGTATTGTT 60.095 37.037 8.51 0.00 42.26 2.83
3654 7705 7.959651 CACTGAAGCTACAATCTTGTATTGTTC 59.040 37.037 8.51 7.42 42.26 3.18
3655 7706 7.880195 ACTGAAGCTACAATCTTGTATTGTTCT 59.120 33.333 8.51 4.65 42.26 3.01
3656 7707 8.621532 TGAAGCTACAATCTTGTATTGTTCTT 57.378 30.769 8.51 11.37 42.26 2.52
3657 7708 9.066892 TGAAGCTACAATCTTGTATTGTTCTTT 57.933 29.630 8.51 2.19 42.26 2.52
3660 7711 9.726438 AGCTACAATCTTGTATTGTTCTTTAGT 57.274 29.630 8.51 0.00 42.26 2.24
3667 7718 8.876275 TCTTGTATTGTTCTTTAGTAACACGT 57.124 30.769 0.00 0.00 36.61 4.49
3668 7719 9.316730 TCTTGTATTGTTCTTTAGTAACACGTT 57.683 29.630 0.00 0.00 36.61 3.99
3669 7720 9.925268 CTTGTATTGTTCTTTAGTAACACGTTT 57.075 29.630 0.00 0.00 36.61 3.60
3670 7721 9.705471 TTGTATTGTTCTTTAGTAACACGTTTG 57.295 29.630 0.00 0.00 36.61 2.93
3671 7722 8.336806 TGTATTGTTCTTTAGTAACACGTTTGG 58.663 33.333 0.00 0.00 36.61 3.28
3672 7723 6.981762 TTGTTCTTTAGTAACACGTTTGGA 57.018 33.333 0.00 0.00 36.61 3.53
3673 7724 6.592798 TGTTCTTTAGTAACACGTTTGGAG 57.407 37.500 0.00 0.00 32.07 3.86
3674 7725 5.006941 TGTTCTTTAGTAACACGTTTGGAGC 59.993 40.000 0.00 0.00 32.07 4.70
3675 7726 4.952460 TCTTTAGTAACACGTTTGGAGCT 58.048 39.130 0.00 0.00 0.00 4.09
3676 7727 5.362263 TCTTTAGTAACACGTTTGGAGCTT 58.638 37.500 0.00 0.00 0.00 3.74
3677 7728 5.235616 TCTTTAGTAACACGTTTGGAGCTTG 59.764 40.000 0.00 0.00 0.00 4.01
3678 7729 3.188159 AGTAACACGTTTGGAGCTTGA 57.812 42.857 0.00 0.00 0.00 3.02
3679 7730 3.537580 AGTAACACGTTTGGAGCTTGAA 58.462 40.909 0.00 0.00 0.00 2.69
3680 7731 4.134563 AGTAACACGTTTGGAGCTTGAAT 58.865 39.130 0.00 0.00 0.00 2.57
3681 7732 5.302360 AGTAACACGTTTGGAGCTTGAATA 58.698 37.500 0.00 0.00 0.00 1.75
3682 7733 5.761234 AGTAACACGTTTGGAGCTTGAATAA 59.239 36.000 0.00 0.00 0.00 1.40
3683 7734 5.705609 AACACGTTTGGAGCTTGAATAAT 57.294 34.783 0.00 0.00 0.00 1.28
3684 7735 6.811253 AACACGTTTGGAGCTTGAATAATA 57.189 33.333 0.00 0.00 0.00 0.98
3685 7736 6.811253 ACACGTTTGGAGCTTGAATAATAA 57.189 33.333 0.00 0.00 0.00 1.40
3686 7737 7.391148 ACACGTTTGGAGCTTGAATAATAAT 57.609 32.000 0.00 0.00 0.00 1.28
3687 7738 7.826690 ACACGTTTGGAGCTTGAATAATAATT 58.173 30.769 0.00 0.00 0.00 1.40
3688 7739 8.303876 ACACGTTTGGAGCTTGAATAATAATTT 58.696 29.630 0.00 0.00 0.00 1.82
3689 7740 9.139174 CACGTTTGGAGCTTGAATAATAATTTT 57.861 29.630 0.00 0.00 0.00 1.82
3690 7741 9.705290 ACGTTTGGAGCTTGAATAATAATTTTT 57.295 25.926 0.00 0.00 0.00 1.94
3717 7768 9.955102 TGATCATATTTATCTTCTCATTCCTGG 57.045 33.333 0.00 0.00 0.00 4.45
3736 7787 4.431416 TGGAAACAGCCTCTTACAGAAA 57.569 40.909 0.00 0.00 35.01 2.52
3737 7788 4.985538 TGGAAACAGCCTCTTACAGAAAT 58.014 39.130 0.00 0.00 35.01 2.17
3738 7789 4.761739 TGGAAACAGCCTCTTACAGAAATG 59.238 41.667 0.00 0.00 35.01 2.32
3739 7790 4.762251 GGAAACAGCCTCTTACAGAAATGT 59.238 41.667 0.00 0.00 0.00 2.71
3740 7791 5.938125 GGAAACAGCCTCTTACAGAAATGTA 59.062 40.000 0.00 0.00 0.00 2.29
3741 7792 6.092807 GGAAACAGCCTCTTACAGAAATGTAG 59.907 42.308 0.00 0.00 0.00 2.74
3742 7793 5.091261 ACAGCCTCTTACAGAAATGTAGG 57.909 43.478 0.00 0.00 0.00 3.18
3743 7794 4.080863 ACAGCCTCTTACAGAAATGTAGGG 60.081 45.833 0.00 0.66 0.00 3.53
3744 7795 4.162320 CAGCCTCTTACAGAAATGTAGGGA 59.838 45.833 0.00 0.00 0.00 4.20
3745 7796 4.783227 AGCCTCTTACAGAAATGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
3746 7797 5.250774 AGCCTCTTACAGAAATGTAGGGAAA 59.749 40.000 0.00 0.00 0.00 3.13
3747 7798 5.586643 GCCTCTTACAGAAATGTAGGGAAAG 59.413 44.000 0.00 0.00 0.00 2.62
3748 7799 6.116126 CCTCTTACAGAAATGTAGGGAAAGG 58.884 44.000 0.00 0.00 0.00 3.11
3749 7800 5.497474 TCTTACAGAAATGTAGGGAAAGGC 58.503 41.667 0.00 0.00 0.00 4.35
3750 7801 5.250774 TCTTACAGAAATGTAGGGAAAGGCT 59.749 40.000 0.00 0.00 0.00 4.58
3751 7802 3.690460 ACAGAAATGTAGGGAAAGGCTG 58.310 45.455 0.00 0.00 0.00 4.85
3752 7803 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
3753 7804 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
3754 7805 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
3755 7806 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
3756 7807 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
3757 7808 0.535797 GTAGGGAAAGGCTGCGTACT 59.464 55.000 0.00 0.00 34.81 2.73
3758 7809 1.753073 GTAGGGAAAGGCTGCGTACTA 59.247 52.381 0.00 0.00 34.81 1.82
3759 7810 1.497161 AGGGAAAGGCTGCGTACTAT 58.503 50.000 0.00 0.00 0.00 2.12
3760 7811 2.674420 AGGGAAAGGCTGCGTACTATA 58.326 47.619 0.00 0.00 0.00 1.31
3761 7812 2.628657 AGGGAAAGGCTGCGTACTATAG 59.371 50.000 0.00 0.00 0.00 1.31
3762 7813 2.626743 GGGAAAGGCTGCGTACTATAGA 59.373 50.000 6.78 0.00 0.00 1.98
3763 7814 3.552478 GGGAAAGGCTGCGTACTATAGAC 60.552 52.174 6.78 0.00 0.00 2.59
3764 7815 3.552478 GGAAAGGCTGCGTACTATAGACC 60.552 52.174 6.78 0.00 0.00 3.85
3765 7816 1.618487 AGGCTGCGTACTATAGACCC 58.382 55.000 6.78 0.00 0.00 4.46
3766 7817 1.133575 AGGCTGCGTACTATAGACCCA 60.134 52.381 6.78 0.00 0.00 4.51
3767 7818 1.684983 GGCTGCGTACTATAGACCCAA 59.315 52.381 6.78 0.00 0.00 4.12
3768 7819 2.101917 GGCTGCGTACTATAGACCCAAA 59.898 50.000 6.78 0.00 0.00 3.28
3769 7820 3.381949 GCTGCGTACTATAGACCCAAAG 58.618 50.000 6.78 0.00 0.00 2.77
3770 7821 3.181478 GCTGCGTACTATAGACCCAAAGT 60.181 47.826 6.78 0.00 0.00 2.66
3771 7822 4.360563 CTGCGTACTATAGACCCAAAGTG 58.639 47.826 6.78 0.00 0.00 3.16
3772 7823 3.131577 TGCGTACTATAGACCCAAAGTGG 59.868 47.826 6.78 0.00 37.25 4.00
3773 7824 3.131755 GCGTACTATAGACCCAAAGTGGT 59.868 47.826 6.78 0.00 42.79 4.16
3778 7829 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
3779 7830 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
3780 7831 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
3781 7832 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
3782 7833 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
3783 7834 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
3784 7835 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
3785 7836 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
3786 7837 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
3793 7844 4.735599 GACCCTTCCCCGGACCCT 62.736 72.222 0.73 0.00 0.00 4.34
3820 7871 2.203070 GGAGCTACATGCACCGGG 60.203 66.667 6.32 0.00 42.21 5.73
3821 7872 2.897350 GAGCTACATGCACCGGGC 60.897 66.667 6.32 7.25 45.94 6.13
3822 7873 3.391665 GAGCTACATGCACCGGGCT 62.392 63.158 6.32 0.81 45.94 5.19
3823 7874 3.204827 GCTACATGCACCGGGCTG 61.205 66.667 6.32 9.21 45.15 4.85
3824 7875 3.204827 CTACATGCACCGGGCTGC 61.205 66.667 6.32 8.50 45.15 5.25
3825 7876 4.794648 TACATGCACCGGGCTGCC 62.795 66.667 11.05 11.05 45.15 4.85
3831 7882 2.917227 CACCGGGCTGCCCTTTTT 60.917 61.111 33.39 13.23 42.67 1.94
3878 7929 4.011966 TGCACATGCTATGGATAGAAGG 57.988 45.455 5.31 0.00 42.66 3.46
3896 7948 9.803315 GATAGAAGGAAGTTTTCACAAGTTTTT 57.197 29.630 0.00 0.00 0.00 1.94
3932 7984 8.887717 GTTAATGAGATGGATGCAGAATATACC 58.112 37.037 0.00 0.00 0.00 2.73
3958 8011 8.338259 CGCTGAAACTTGAAATGTAATATAGCT 58.662 33.333 0.00 0.00 0.00 3.32
3964 8017 9.740710 AACTTGAAATGTAATATAGCTATCCCC 57.259 33.333 10.16 0.00 0.00 4.81
3984 8037 2.353704 CCGTACTCATGCACAAGGAAGA 60.354 50.000 0.00 0.00 0.00 2.87
4021 8074 9.669353 GCGATTTATATCAATTGTCAGATTTGT 57.331 29.630 5.13 0.00 0.00 2.83
4047 8100 0.673644 CAACGGGTGCCTAGTTGGAG 60.674 60.000 16.29 0.05 40.89 3.86
4399 8968 2.882761 GCAGCTGGAATATGCATTCTGA 59.117 45.455 17.12 0.00 40.45 3.27
4459 9028 3.282885 GAGGCTAACTCCCCTTGATTTG 58.717 50.000 0.00 0.00 40.49 2.32
4496 9118 2.104281 GACCTACTTCAAGTGTGGTGGT 59.896 50.000 18.26 10.13 36.82 4.16
4514 9136 2.214216 TGTCTCCCTTGGTGTCGGG 61.214 63.158 0.00 0.00 42.05 5.14
4598 9220 0.744414 GCCGTGGAGCTAAGATTGCA 60.744 55.000 0.00 0.00 0.00 4.08
4601 9223 1.662629 CGTGGAGCTAAGATTGCAGTG 59.337 52.381 0.00 0.00 0.00 3.66
4768 9393 1.280421 GGACATCTTCAAGCTCACCCT 59.720 52.381 0.00 0.00 0.00 4.34
4782 9407 1.229464 ACCCTCTCAGAGCTTGGCT 60.229 57.895 0.00 0.00 43.88 4.75
4814 9439 2.529744 GCTCCCCACAGGTGAAGGT 61.530 63.158 0.00 0.00 36.75 3.50
4821 9446 2.594303 CAGGTGAAGGTGCGCCAA 60.594 61.111 20.59 0.00 40.91 4.52
4886 9511 2.981560 CTCCATTGCGCGCAACCTT 61.982 57.895 44.93 29.10 38.88 3.50
4887 9512 2.806198 CCATTGCGCGCAACCTTG 60.806 61.111 44.93 36.37 38.88 3.61
5330 9955 2.116533 CGCCATCTCATTGCAGGCA 61.117 57.895 11.00 0.00 45.47 4.75
5380 10005 6.136155 TGATCCTTGATGTGTAGATAGACCA 58.864 40.000 0.00 0.00 0.00 4.02
5446 10071 2.160813 CCGAACGTTTTTCTGGGGTATG 59.839 50.000 0.46 0.00 0.00 2.39
5496 10121 3.520317 ACCGGAGTTTATATGGTGGACAA 59.480 43.478 9.46 0.00 0.00 3.18
5763 10395 2.166459 ACAGATGCTACATACACGCTGT 59.834 45.455 0.00 0.00 33.59 4.40
5770 10402 3.181499 GCTACATACACGCTGTACTCAGT 60.181 47.826 0.00 0.00 43.05 3.41
5771 10403 4.034858 GCTACATACACGCTGTACTCAGTA 59.965 45.833 0.00 0.00 43.05 2.74
5773 10405 3.181513 ACATACACGCTGTACTCAGTACG 60.182 47.826 10.46 6.48 41.41 3.67
5774 10406 1.233019 ACACGCTGTACTCAGTACGT 58.767 50.000 10.46 1.86 41.41 3.57
5776 10408 0.520404 ACGCTGTACTCAGTACGTGG 59.480 55.000 18.33 9.98 41.41 4.94
5778 10410 1.171308 GCTGTACTCAGTACGTGGGA 58.829 55.000 10.46 0.00 41.41 4.37
5780 10412 1.743958 CTGTACTCAGTACGTGGGAGG 59.256 57.143 10.46 0.00 41.41 4.30
5825 10462 9.778741 CTGGTTGTTTGGATAGCTAGATTATAA 57.221 33.333 0.00 0.00 0.00 0.98
6241 10879 1.107945 TACGTGGATCTTCATGGCGA 58.892 50.000 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.825109 TGCTTGCATGTTACTATACTTATGTTA 57.175 29.630 1.14 0.00 0.00 2.41
6 7 8.731275 TGCTTGCATGTTACTATACTTATGTT 57.269 30.769 1.14 0.00 0.00 2.71
7 8 8.908786 ATGCTTGCATGTTACTATACTTATGT 57.091 30.769 7.35 0.00 0.00 2.29
8 9 9.817365 GAATGCTTGCATGTTACTATACTTATG 57.183 33.333 8.98 0.00 0.00 1.90
9 10 9.559732 TGAATGCTTGCATGTTACTATACTTAT 57.440 29.630 8.98 0.00 0.00 1.73
10 11 8.956533 TGAATGCTTGCATGTTACTATACTTA 57.043 30.769 8.98 0.00 0.00 2.24
11 12 7.864108 TGAATGCTTGCATGTTACTATACTT 57.136 32.000 8.98 0.00 0.00 2.24
12 13 8.455903 AATGAATGCTTGCATGTTACTATACT 57.544 30.769 8.98 0.00 0.00 2.12
17 18 9.740239 CTAATAAATGAATGCTTGCATGTTACT 57.260 29.630 8.98 0.00 0.00 2.24
18 19 8.971321 CCTAATAAATGAATGCTTGCATGTTAC 58.029 33.333 8.98 2.89 0.00 2.50
19 20 8.694540 ACCTAATAAATGAATGCTTGCATGTTA 58.305 29.630 8.98 6.37 0.00 2.41
20 21 7.558604 ACCTAATAAATGAATGCTTGCATGTT 58.441 30.769 8.98 2.67 0.00 2.71
21 22 7.116075 ACCTAATAAATGAATGCTTGCATGT 57.884 32.000 8.98 0.00 0.00 3.21
22 23 9.701098 ATAACCTAATAAATGAATGCTTGCATG 57.299 29.630 8.98 0.00 0.00 4.06
40 41 9.778741 CCAAAGCAATATGAGTCTATAACCTAA 57.221 33.333 0.00 0.00 0.00 2.69
41 42 8.375506 CCCAAAGCAATATGAGTCTATAACCTA 58.624 37.037 0.00 0.00 0.00 3.08
42 43 7.072454 TCCCAAAGCAATATGAGTCTATAACCT 59.928 37.037 0.00 0.00 0.00 3.50
43 44 7.173390 GTCCCAAAGCAATATGAGTCTATAACC 59.827 40.741 0.00 0.00 0.00 2.85
44 45 7.715249 TGTCCCAAAGCAATATGAGTCTATAAC 59.285 37.037 0.00 0.00 0.00 1.89
45 46 7.801104 TGTCCCAAAGCAATATGAGTCTATAA 58.199 34.615 0.00 0.00 0.00 0.98
46 47 7.373617 TGTCCCAAAGCAATATGAGTCTATA 57.626 36.000 0.00 0.00 0.00 1.31
47 48 6.252599 TGTCCCAAAGCAATATGAGTCTAT 57.747 37.500 0.00 0.00 0.00 1.98
48 49 5.692115 TGTCCCAAAGCAATATGAGTCTA 57.308 39.130 0.00 0.00 0.00 2.59
49 50 4.574674 TGTCCCAAAGCAATATGAGTCT 57.425 40.909 0.00 0.00 0.00 3.24
50 51 4.641989 ACATGTCCCAAAGCAATATGAGTC 59.358 41.667 0.00 0.00 0.00 3.36
51 52 4.400251 CACATGTCCCAAAGCAATATGAGT 59.600 41.667 0.00 0.00 0.00 3.41
52 53 4.641541 TCACATGTCCCAAAGCAATATGAG 59.358 41.667 0.00 0.00 0.00 2.90
53 54 4.598022 TCACATGTCCCAAAGCAATATGA 58.402 39.130 0.00 0.00 0.00 2.15
54 55 4.987408 TCACATGTCCCAAAGCAATATG 57.013 40.909 0.00 0.00 0.00 1.78
55 56 4.957954 ACATCACATGTCCCAAAGCAATAT 59.042 37.500 0.00 0.00 39.92 1.28
56 57 4.343231 ACATCACATGTCCCAAAGCAATA 58.657 39.130 0.00 0.00 39.92 1.90
57 58 3.167485 ACATCACATGTCCCAAAGCAAT 58.833 40.909 0.00 0.00 39.92 3.56
58 59 2.596346 ACATCACATGTCCCAAAGCAA 58.404 42.857 0.00 0.00 39.92 3.91
59 60 2.291209 ACATCACATGTCCCAAAGCA 57.709 45.000 0.00 0.00 39.92 3.91
60 61 3.505680 TGTAACATCACATGTCCCAAAGC 59.494 43.478 0.00 0.00 44.07 3.51
61 62 4.761739 ACTGTAACATCACATGTCCCAAAG 59.238 41.667 0.00 0.00 44.07 2.77
62 63 4.724399 ACTGTAACATCACATGTCCCAAA 58.276 39.130 0.00 0.00 44.07 3.28
63 64 4.365514 ACTGTAACATCACATGTCCCAA 57.634 40.909 0.00 0.00 44.07 4.12
64 65 5.012664 AGTTACTGTAACATCACATGTCCCA 59.987 40.000 27.12 0.00 44.07 4.37
65 66 5.488341 AGTTACTGTAACATCACATGTCCC 58.512 41.667 27.12 1.55 44.07 4.46
66 67 6.255887 GCTAGTTACTGTAACATCACATGTCC 59.744 42.308 27.12 1.73 44.07 4.02
67 68 7.036220 AGCTAGTTACTGTAACATCACATGTC 58.964 38.462 27.12 9.51 44.07 3.06
69 70 8.926715 TTAGCTAGTTACTGTAACATCACATG 57.073 34.615 27.12 12.57 41.07 3.21
70 71 8.750298 ACTTAGCTAGTTACTGTAACATCACAT 58.250 33.333 27.12 11.85 41.07 3.21
71 72 8.118976 ACTTAGCTAGTTACTGTAACATCACA 57.881 34.615 27.12 10.61 41.07 3.58
72 73 8.983307 AACTTAGCTAGTTACTGTAACATCAC 57.017 34.615 27.12 15.70 45.22 3.06
89 90 9.333724 GAGAGAGATAGTTACAGTAACTTAGCT 57.666 37.037 27.29 20.99 46.27 3.32
90 91 8.562052 GGAGAGAGATAGTTACAGTAACTTAGC 58.438 40.741 27.29 17.51 46.27 3.09
91 92 9.841295 AGGAGAGAGATAGTTACAGTAACTTAG 57.159 37.037 27.29 0.00 46.27 2.18
105 106 9.638239 GCAATGAGTTAATAAGGAGAGAGATAG 57.362 37.037 0.00 0.00 0.00 2.08
106 107 8.589338 GGCAATGAGTTAATAAGGAGAGAGATA 58.411 37.037 0.00 0.00 0.00 1.98
107 108 7.071698 TGGCAATGAGTTAATAAGGAGAGAGAT 59.928 37.037 0.00 0.00 0.00 2.75
108 109 6.384015 TGGCAATGAGTTAATAAGGAGAGAGA 59.616 38.462 0.00 0.00 0.00 3.10
109 110 6.481644 GTGGCAATGAGTTAATAAGGAGAGAG 59.518 42.308 0.00 0.00 0.00 3.20
110 111 6.070251 TGTGGCAATGAGTTAATAAGGAGAGA 60.070 38.462 0.00 0.00 0.00 3.10
111 112 6.115446 TGTGGCAATGAGTTAATAAGGAGAG 58.885 40.000 0.00 0.00 0.00 3.20
112 113 6.061022 TGTGGCAATGAGTTAATAAGGAGA 57.939 37.500 0.00 0.00 0.00 3.71
113 114 6.949352 ATGTGGCAATGAGTTAATAAGGAG 57.051 37.500 0.00 0.00 0.00 3.69
114 115 7.013274 GCTTATGTGGCAATGAGTTAATAAGGA 59.987 37.037 0.00 0.00 30.56 3.36
115 116 7.141363 GCTTATGTGGCAATGAGTTAATAAGG 58.859 38.462 0.00 0.00 30.56 2.69
116 117 7.706159 TGCTTATGTGGCAATGAGTTAATAAG 58.294 34.615 0.00 0.00 36.71 1.73
117 118 7.637631 TGCTTATGTGGCAATGAGTTAATAA 57.362 32.000 0.00 0.00 36.71 1.40
118 119 7.637631 TTGCTTATGTGGCAATGAGTTAATA 57.362 32.000 0.00 0.00 43.50 0.98
119 120 6.528537 TTGCTTATGTGGCAATGAGTTAAT 57.471 33.333 0.00 0.00 43.50 1.40
120 121 5.973899 TTGCTTATGTGGCAATGAGTTAA 57.026 34.783 0.00 0.00 43.50 2.01
121 122 5.973899 TTTGCTTATGTGGCAATGAGTTA 57.026 34.783 2.01 0.00 46.81 2.24
122 123 4.870123 TTTGCTTATGTGGCAATGAGTT 57.130 36.364 2.01 0.00 46.81 3.01
123 124 5.410355 AATTTGCTTATGTGGCAATGAGT 57.590 34.783 2.01 0.00 46.81 3.41
124 125 6.102006 CAAATTTGCTTATGTGGCAATGAG 57.898 37.500 5.01 0.00 46.81 2.90
139 140 3.311966 GAGTCCAACTCAGCAAATTTGC 58.688 45.455 31.36 31.36 44.45 3.68
140 141 3.250762 TCGAGTCCAACTCAGCAAATTTG 59.749 43.478 14.03 14.03 45.30 2.32
141 142 3.476552 TCGAGTCCAACTCAGCAAATTT 58.523 40.909 7.78 0.00 45.30 1.82
142 143 3.126001 TCGAGTCCAACTCAGCAAATT 57.874 42.857 7.78 0.00 45.30 1.82
143 144 2.839486 TCGAGTCCAACTCAGCAAAT 57.161 45.000 7.78 0.00 45.30 2.32
144 145 2.224281 ACATCGAGTCCAACTCAGCAAA 60.224 45.455 7.78 0.00 45.30 3.68
145 146 1.344438 ACATCGAGTCCAACTCAGCAA 59.656 47.619 7.78 0.00 45.30 3.91
146 147 0.969149 ACATCGAGTCCAACTCAGCA 59.031 50.000 7.78 0.00 45.30 4.41
147 148 2.086054 AACATCGAGTCCAACTCAGC 57.914 50.000 7.78 0.00 45.30 4.26
148 149 4.442375 AGTAACATCGAGTCCAACTCAG 57.558 45.455 7.78 1.37 45.30 3.35
149 150 5.008331 AGTAGTAACATCGAGTCCAACTCA 58.992 41.667 7.78 0.00 45.30 3.41
150 151 5.123502 TCAGTAGTAACATCGAGTCCAACTC 59.876 44.000 0.00 0.00 41.71 3.01
151 152 5.008331 TCAGTAGTAACATCGAGTCCAACT 58.992 41.667 0.00 0.00 0.00 3.16
152 153 5.306532 TCAGTAGTAACATCGAGTCCAAC 57.693 43.478 0.00 0.00 0.00 3.77
153 154 5.970317 TTCAGTAGTAACATCGAGTCCAA 57.030 39.130 0.00 0.00 0.00 3.53
154 155 5.970317 TTTCAGTAGTAACATCGAGTCCA 57.030 39.130 0.00 0.00 0.00 4.02
155 156 8.189460 AGTAATTTCAGTAGTAACATCGAGTCC 58.811 37.037 0.00 0.00 0.00 3.85
156 157 9.224058 GAGTAATTTCAGTAGTAACATCGAGTC 57.776 37.037 0.00 0.00 0.00 3.36
157 158 8.189460 GGAGTAATTTCAGTAGTAACATCGAGT 58.811 37.037 0.00 0.00 0.00 4.18
158 159 7.648510 GGGAGTAATTTCAGTAGTAACATCGAG 59.351 40.741 0.00 0.00 0.00 4.04
159 160 7.123098 TGGGAGTAATTTCAGTAGTAACATCGA 59.877 37.037 0.00 0.00 0.00 3.59
160 161 7.222224 GTGGGAGTAATTTCAGTAGTAACATCG 59.778 40.741 0.00 0.00 0.00 3.84
161 162 8.258708 AGTGGGAGTAATTTCAGTAGTAACATC 58.741 37.037 0.00 0.00 0.00 3.06
162 163 8.041323 CAGTGGGAGTAATTTCAGTAGTAACAT 58.959 37.037 0.00 0.00 0.00 2.71
163 164 7.015877 ACAGTGGGAGTAATTTCAGTAGTAACA 59.984 37.037 0.00 0.00 0.00 2.41
164 165 7.331193 CACAGTGGGAGTAATTTCAGTAGTAAC 59.669 40.741 0.00 0.00 0.00 2.50
165 166 7.233962 TCACAGTGGGAGTAATTTCAGTAGTAA 59.766 37.037 0.00 0.00 0.00 2.24
166 167 6.722590 TCACAGTGGGAGTAATTTCAGTAGTA 59.277 38.462 0.00 0.00 0.00 1.82
167 168 5.542635 TCACAGTGGGAGTAATTTCAGTAGT 59.457 40.000 0.00 0.00 0.00 2.73
168 169 5.869888 GTCACAGTGGGAGTAATTTCAGTAG 59.130 44.000 0.00 0.00 0.00 2.57
169 170 5.542635 AGTCACAGTGGGAGTAATTTCAGTA 59.457 40.000 0.00 0.00 0.00 2.74
170 171 4.348168 AGTCACAGTGGGAGTAATTTCAGT 59.652 41.667 0.00 0.00 0.00 3.41
171 172 4.899502 AGTCACAGTGGGAGTAATTTCAG 58.100 43.478 0.00 0.00 0.00 3.02
172 173 4.974645 AGTCACAGTGGGAGTAATTTCA 57.025 40.909 0.00 0.00 0.00 2.69
173 174 6.038997 ACTAGTCACAGTGGGAGTAATTTC 57.961 41.667 11.10 0.00 0.00 2.17
174 175 5.780793 AGACTAGTCACAGTGGGAGTAATTT 59.219 40.000 24.44 0.00 0.00 1.82
175 176 5.334421 AGACTAGTCACAGTGGGAGTAATT 58.666 41.667 24.44 1.50 0.00 1.40
176 177 4.936802 AGACTAGTCACAGTGGGAGTAAT 58.063 43.478 24.44 0.75 0.00 1.89
177 178 4.383931 AGACTAGTCACAGTGGGAGTAA 57.616 45.455 24.44 0.00 0.00 2.24
178 179 5.251764 GTTAGACTAGTCACAGTGGGAGTA 58.748 45.833 24.44 9.60 0.00 2.59
179 180 2.982339 AGACTAGTCACAGTGGGAGT 57.018 50.000 24.44 8.06 0.00 3.85
180 181 3.444388 GGTTAGACTAGTCACAGTGGGAG 59.556 52.174 24.44 0.00 0.00 4.30
181 182 3.181426 TGGTTAGACTAGTCACAGTGGGA 60.181 47.826 24.44 0.00 0.00 4.37
182 183 3.056749 GTGGTTAGACTAGTCACAGTGGG 60.057 52.174 24.44 0.00 0.00 4.61
183 184 3.572682 TGTGGTTAGACTAGTCACAGTGG 59.427 47.826 24.44 0.00 34.01 4.00
184 185 4.848562 TGTGGTTAGACTAGTCACAGTG 57.151 45.455 24.44 0.00 34.01 3.66
185 186 5.775701 AGAATGTGGTTAGACTAGTCACAGT 59.224 40.000 24.44 18.01 40.89 3.55
186 187 6.151985 AGAGAATGTGGTTAGACTAGTCACAG 59.848 42.308 24.44 0.00 40.89 3.66
187 188 6.010850 AGAGAATGTGGTTAGACTAGTCACA 58.989 40.000 24.44 19.04 41.64 3.58
188 189 6.518208 AGAGAATGTGGTTAGACTAGTCAC 57.482 41.667 24.44 14.36 0.00 3.67
189 190 7.378966 CAAAGAGAATGTGGTTAGACTAGTCA 58.621 38.462 24.44 8.16 0.00 3.41
190 191 6.311690 GCAAAGAGAATGTGGTTAGACTAGTC 59.688 42.308 15.41 15.41 0.00 2.59
191 192 6.166982 GCAAAGAGAATGTGGTTAGACTAGT 58.833 40.000 0.00 0.00 0.00 2.57
192 193 5.289675 CGCAAAGAGAATGTGGTTAGACTAG 59.710 44.000 0.00 0.00 0.00 2.57
193 194 5.168569 CGCAAAGAGAATGTGGTTAGACTA 58.831 41.667 0.00 0.00 0.00 2.59
194 195 3.997021 CGCAAAGAGAATGTGGTTAGACT 59.003 43.478 0.00 0.00 0.00 3.24
195 196 3.125316 CCGCAAAGAGAATGTGGTTAGAC 59.875 47.826 0.00 0.00 42.27 2.59
196 197 3.334691 CCGCAAAGAGAATGTGGTTAGA 58.665 45.455 0.00 0.00 42.27 2.10
197 198 3.747099 CCGCAAAGAGAATGTGGTTAG 57.253 47.619 0.00 0.00 42.27 2.34
202 203 1.267806 ACAAGCCGCAAAGAGAATGTG 59.732 47.619 0.00 0.00 0.00 3.21
203 204 1.609208 ACAAGCCGCAAAGAGAATGT 58.391 45.000 0.00 0.00 0.00 2.71
204 205 2.322161 CAACAAGCCGCAAAGAGAATG 58.678 47.619 0.00 0.00 0.00 2.67
205 206 1.336240 GCAACAAGCCGCAAAGAGAAT 60.336 47.619 0.00 0.00 37.23 2.40
206 207 0.030638 GCAACAAGCCGCAAAGAGAA 59.969 50.000 0.00 0.00 37.23 2.87
207 208 1.100463 TGCAACAAGCCGCAAAGAGA 61.100 50.000 0.00 0.00 44.83 3.10
208 209 0.248990 TTGCAACAAGCCGCAAAGAG 60.249 50.000 0.00 0.00 44.71 2.85
209 210 1.812525 TTGCAACAAGCCGCAAAGA 59.187 47.368 0.00 0.00 44.71 2.52
210 211 4.416533 TTGCAACAAGCCGCAAAG 57.583 50.000 0.00 0.00 44.71 2.77
212 213 2.105930 GGTTGCAACAAGCCGCAA 59.894 55.556 29.55 0.00 45.45 4.85
213 214 3.143515 TGGTTGCAACAAGCCGCA 61.144 55.556 29.55 14.99 44.83 5.69
214 215 2.658268 GTGGTTGCAACAAGCCGC 60.658 61.111 29.55 15.86 44.83 6.53
215 216 0.249405 ATTGTGGTTGCAACAAGCCG 60.249 50.000 29.55 0.00 44.83 5.52
216 217 1.598601 CAATTGTGGTTGCAACAAGCC 59.401 47.619 29.55 14.01 44.83 4.35
217 218 2.030701 CACAATTGTGGTTGCAACAAGC 59.969 45.455 29.55 18.54 40.64 4.01
218 219 3.519579 TCACAATTGTGGTTGCAACAAG 58.480 40.909 32.54 10.06 45.65 3.16
219 220 3.599730 TCACAATTGTGGTTGCAACAA 57.400 38.095 32.54 17.93 45.65 2.83
220 221 3.715495 GATCACAATTGTGGTTGCAACA 58.285 40.909 32.54 15.25 45.65 3.33
221 222 2.725723 CGATCACAATTGTGGTTGCAAC 59.274 45.455 32.54 21.59 45.65 4.17
222 223 2.360483 ACGATCACAATTGTGGTTGCAA 59.640 40.909 30.87 16.31 42.88 4.08
223 224 1.952990 ACGATCACAATTGTGGTTGCA 59.047 42.857 30.87 16.96 42.88 4.08
224 225 2.318578 CACGATCACAATTGTGGTTGC 58.681 47.619 30.87 17.10 42.88 4.17
225 226 2.318578 GCACGATCACAATTGTGGTTG 58.681 47.619 32.54 31.11 44.45 3.77
226 227 1.269448 GGCACGATCACAATTGTGGTT 59.731 47.619 32.54 22.45 44.45 3.67
227 228 0.881118 GGCACGATCACAATTGTGGT 59.119 50.000 32.54 28.80 44.45 4.16
228 229 0.880441 TGGCACGATCACAATTGTGG 59.120 50.000 32.54 21.37 44.45 4.17
229 230 2.702898 TTGGCACGATCACAATTGTG 57.297 45.000 29.01 29.01 46.26 3.33
230 231 3.940209 AATTGGCACGATCACAATTGT 57.060 38.095 4.92 4.92 41.67 2.71
231 232 4.104776 GGTAATTGGCACGATCACAATTG 58.895 43.478 17.69 3.24 42.74 2.32
232 233 3.761218 TGGTAATTGGCACGATCACAATT 59.239 39.130 14.80 14.80 44.37 2.32
233 234 3.351740 TGGTAATTGGCACGATCACAAT 58.648 40.909 0.00 0.00 36.46 2.71
234 235 2.784347 TGGTAATTGGCACGATCACAA 58.216 42.857 0.00 0.00 0.00 3.33
235 236 2.481289 TGGTAATTGGCACGATCACA 57.519 45.000 0.00 0.00 0.00 3.58
236 237 3.002656 CAGATGGTAATTGGCACGATCAC 59.997 47.826 0.00 0.00 34.61 3.06
237 238 3.118445 TCAGATGGTAATTGGCACGATCA 60.118 43.478 0.00 0.00 34.61 2.92
238 239 3.248602 GTCAGATGGTAATTGGCACGATC 59.751 47.826 0.00 0.00 32.94 3.69
239 240 3.206150 GTCAGATGGTAATTGGCACGAT 58.794 45.455 0.00 0.00 0.00 3.73
240 241 2.627945 GTCAGATGGTAATTGGCACGA 58.372 47.619 0.00 0.00 0.00 4.35
241 242 1.670811 GGTCAGATGGTAATTGGCACG 59.329 52.381 0.00 0.00 0.00 5.34
242 243 3.004752 AGGTCAGATGGTAATTGGCAC 57.995 47.619 0.00 0.00 0.00 5.01
243 244 3.737559 AAGGTCAGATGGTAATTGGCA 57.262 42.857 0.00 0.00 0.00 4.92
244 245 4.273318 AGAAAGGTCAGATGGTAATTGGC 58.727 43.478 0.00 0.00 0.00 4.52
245 246 4.572389 CGAGAAAGGTCAGATGGTAATTGG 59.428 45.833 0.00 0.00 0.00 3.16
246 247 5.178797 ACGAGAAAGGTCAGATGGTAATTG 58.821 41.667 0.00 0.00 0.00 2.32
247 248 5.422214 ACGAGAAAGGTCAGATGGTAATT 57.578 39.130 0.00 0.00 0.00 1.40
248 249 5.046591 TCAACGAGAAAGGTCAGATGGTAAT 60.047 40.000 0.00 0.00 0.00 1.89
301 308 1.063266 ACACCTGCCTTTTCCCTTTCA 60.063 47.619 0.00 0.00 0.00 2.69
333 341 3.648982 CAGCTCACGCCACGCAAA 61.649 61.111 0.00 0.00 36.60 3.68
353 361 2.439519 CATGTTACCACCCCGGGC 60.440 66.667 17.73 0.00 40.22 6.13
437 452 3.819337 GGTTAAAAACGGCTTCTCCTTCT 59.181 43.478 0.00 0.00 0.00 2.85
450 465 3.902261 ACGGACGGAATGGTTAAAAAC 57.098 42.857 0.00 0.00 0.00 2.43
469 1860 2.825836 CAGGCAGGCCGGATGAAC 60.826 66.667 5.05 0.00 41.95 3.18
626 2048 2.187946 CGGCAAAGAGGAGCGGAT 59.812 61.111 0.00 0.00 33.49 4.18
630 2052 2.815647 CGGACGGCAAAGAGGAGC 60.816 66.667 0.00 0.00 0.00 4.70
703 2137 2.505557 GATTGCGCTGCCTTGTGC 60.506 61.111 9.73 0.00 43.07 4.57
704 2138 1.443194 GTGATTGCGCTGCCTTGTG 60.443 57.895 9.73 0.00 0.00 3.33
705 2139 1.859427 CTGTGATTGCGCTGCCTTGT 61.859 55.000 9.73 0.00 0.00 3.16
706 2140 1.154093 CTGTGATTGCGCTGCCTTG 60.154 57.895 9.73 0.00 0.00 3.61
707 2141 2.338015 CCTGTGATTGCGCTGCCTT 61.338 57.895 9.73 0.00 0.00 4.35
708 2142 2.749044 CCTGTGATTGCGCTGCCT 60.749 61.111 9.73 0.00 0.00 4.75
709 2143 2.334946 TTCCTGTGATTGCGCTGCC 61.335 57.895 9.73 0.00 0.00 4.85
710 2144 1.154150 GTTCCTGTGATTGCGCTGC 60.154 57.895 9.73 0.00 0.00 5.25
754 2195 2.159101 TATATAGGGCGGGCGAGGGT 62.159 60.000 0.00 0.00 0.00 4.34
755 2196 0.974010 TTATATAGGGCGGGCGAGGG 60.974 60.000 0.00 0.00 0.00 4.30
756 2197 0.175073 GTTATATAGGGCGGGCGAGG 59.825 60.000 0.00 0.00 0.00 4.63
906 2348 1.301293 CTGACCTTGGAAGAGGGGC 59.699 63.158 0.00 0.00 41.31 5.80
959 2422 2.330372 GCGAAACGGAAGGGGGAAC 61.330 63.158 0.00 0.00 0.00 3.62
1473 2952 0.827089 TACGTTTCCGTCCAGGGACA 60.827 55.000 17.97 0.00 46.28 4.02
1477 2956 0.390735 CCCTTACGTTTCCGTCCAGG 60.391 60.000 0.00 6.47 46.28 4.45
1479 2958 0.318120 GTCCCTTACGTTTCCGTCCA 59.682 55.000 0.00 0.00 46.28 4.02
1509 3070 1.002366 CGCGTTCCTCATCCAGAAAG 58.998 55.000 0.00 0.00 0.00 2.62
1510 3071 0.606096 TCGCGTTCCTCATCCAGAAA 59.394 50.000 5.77 0.00 0.00 2.52
1512 3073 1.248101 TGTCGCGTTCCTCATCCAGA 61.248 55.000 5.77 0.00 0.00 3.86
1514 3075 1.080093 GTGTCGCGTTCCTCATCCA 60.080 57.895 5.77 0.00 0.00 3.41
1518 3079 2.355837 GCAGTGTCGCGTTCCTCA 60.356 61.111 5.77 0.00 0.00 3.86
1540 3101 4.884164 GGTTATGCTAAATCTGAAGCCACT 59.116 41.667 0.00 0.00 37.97 4.00
1550 3111 4.068599 GGAGGCAGAGGTTATGCTAAATC 58.931 47.826 0.00 0.00 43.35 2.17
1630 3208 3.327757 AGAATAAGGTGGTCTGCTGAACA 59.672 43.478 7.31 7.31 37.61 3.18
1638 3321 3.368531 GCTCGAACAGAATAAGGTGGTCT 60.369 47.826 0.00 0.00 0.00 3.85
1753 5095 5.289675 CGAGTCTTCCACTAAGCATAAACAG 59.710 44.000 0.00 0.00 34.41 3.16
1924 5266 6.916360 ATTTCTTGAGTTGGCAGGATTTAA 57.084 33.333 0.00 0.00 0.00 1.52
1928 5270 6.189859 TGATAATTTCTTGAGTTGGCAGGAT 58.810 36.000 0.00 0.00 0.00 3.24
1973 5315 6.421202 GTCGAAAACTTCTACATATAGCCCAG 59.579 42.308 0.00 0.00 0.00 4.45
2010 5368 1.712018 GCGGCGTCCCAATTACTTCC 61.712 60.000 9.37 0.00 0.00 3.46
2271 5667 6.709846 GTCTCCAATCTCTATCAAAGGAATGG 59.290 42.308 0.00 0.00 31.58 3.16
2284 5680 5.495926 ACTGAATTGTGTCTCCAATCTCT 57.504 39.130 0.00 0.00 34.01 3.10
2306 5702 1.263356 CTAGAAGGTGGACCCGTGAA 58.737 55.000 0.00 0.00 38.74 3.18
2310 5706 1.409427 GATCACTAGAAGGTGGACCCG 59.591 57.143 0.00 0.00 38.74 5.28
2333 5729 1.497278 CACGAAATGGCAGGTGACG 59.503 57.895 0.00 0.00 32.23 4.35
2354 5750 4.793201 AGCCAATCCCAGTTTACTATTCC 58.207 43.478 0.00 0.00 0.00 3.01
2363 5759 4.229582 TGATAAACCTAGCCAATCCCAGTT 59.770 41.667 0.00 0.00 0.00 3.16
2376 5772 6.957631 AGACAACATGGTGATGATAAACCTA 58.042 36.000 19.90 0.00 37.36 3.08
2437 5852 6.778821 TGTTCCATAGGATCTGAAAGTCAAA 58.221 36.000 0.00 0.00 33.76 2.69
2465 5880 3.840666 TCATAACTCTCAAGTTGGCTCCT 59.159 43.478 2.34 0.00 45.37 3.69
2585 6001 4.013728 AGTTGTGGTTCAGCTTTGTGTTA 58.986 39.130 0.00 0.00 33.95 2.41
2771 6200 8.905660 TGTGCAAACAGTAGTAGGTTATTAAA 57.094 30.769 0.00 0.00 0.00 1.52
2772 6201 9.158233 GATGTGCAAACAGTAGTAGGTTATTAA 57.842 33.333 0.00 0.00 0.00 1.40
2835 6264 4.781934 AGTCAACCTGCCACCTAATTATC 58.218 43.478 0.00 0.00 0.00 1.75
2863 6292 2.489329 AGTTGGCATACACACAGCAATC 59.511 45.455 0.00 0.00 0.00 2.67
2871 6300 6.881602 TGATAAACATGTAGTTGGCATACACA 59.118 34.615 0.00 1.05 41.19 3.72
3008 6437 7.989741 TGAGATGGAAAATCCTCTAGTTCATTC 59.010 37.037 0.00 0.00 37.46 2.67
3079 7111 6.940739 AGTCAAGATGATATTTATCCTCCGG 58.059 40.000 0.00 0.00 30.56 5.14
3127 7159 5.163673 GGTTCAGCTTGGATTGAAGAGAATC 60.164 44.000 0.00 0.00 34.25 2.52
3176 7208 8.934023 AGACCTGTAATTAATTTTCCTTCACA 57.066 30.769 5.91 2.07 0.00 3.58
3247 7281 7.793927 AGCTCAATAATAAAACTGAGGCTAC 57.206 36.000 0.00 0.00 36.60 3.58
3305 7339 2.166664 GGCAAACTAACAACACCAACCA 59.833 45.455 0.00 0.00 0.00 3.67
3353 7387 3.656559 GCAATCAAGCAAGAACCAACAT 58.343 40.909 0.00 0.00 0.00 2.71
3365 7399 1.780860 GTCACACAAACGCAATCAAGC 59.219 47.619 0.00 0.00 0.00 4.01
3391 7425 2.496070 GGAATGGGTGCCCTTTTAAGAC 59.504 50.000 8.91 0.00 34.22 3.01
3393 7427 2.534990 TGGAATGGGTGCCCTTTTAAG 58.465 47.619 8.91 0.00 34.22 1.85
3394 7428 2.635427 GTTGGAATGGGTGCCCTTTTAA 59.365 45.455 8.91 5.82 34.22 1.52
3568 7619 5.882557 GCTGTTTCCAGGAATGAGAAGATAA 59.117 40.000 1.58 0.00 39.22 1.75
3569 7620 5.431765 GCTGTTTCCAGGAATGAGAAGATA 58.568 41.667 1.58 0.00 39.22 1.98
3570 7621 4.268359 GCTGTTTCCAGGAATGAGAAGAT 58.732 43.478 1.58 0.00 39.22 2.40
3571 7622 3.560025 GGCTGTTTCCAGGAATGAGAAGA 60.560 47.826 1.58 0.00 39.22 2.87
3572 7623 2.751806 GGCTGTTTCCAGGAATGAGAAG 59.248 50.000 1.58 0.00 39.22 2.85
3573 7624 2.376518 AGGCTGTTTCCAGGAATGAGAA 59.623 45.455 1.58 0.00 39.22 2.87
3574 7625 1.988107 AGGCTGTTTCCAGGAATGAGA 59.012 47.619 1.58 0.00 39.22 3.27
3575 7626 2.026449 AGAGGCTGTTTCCAGGAATGAG 60.026 50.000 1.58 3.23 39.22 2.90
3576 7627 1.988107 AGAGGCTGTTTCCAGGAATGA 59.012 47.619 1.58 0.00 39.22 2.57
3577 7628 2.503895 AGAGGCTGTTTCCAGGAATG 57.496 50.000 1.58 0.00 39.22 2.67
3578 7629 3.330701 TGTAAGAGGCTGTTTCCAGGAAT 59.669 43.478 1.58 0.00 39.22 3.01
3579 7630 2.708861 TGTAAGAGGCTGTTTCCAGGAA 59.291 45.455 0.90 0.00 39.22 3.36
3580 7631 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
3581 7632 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
3582 7633 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
3594 7645 5.836024 AACACCCCTACATTTCTGTAAGA 57.164 39.130 0.00 0.00 44.68 2.10
3595 7646 6.469410 TGTAACACCCCTACATTTCTGTAAG 58.531 40.000 0.00 0.00 37.41 2.34
3596 7647 6.436738 TGTAACACCCCTACATTTCTGTAA 57.563 37.500 0.00 0.00 37.41 2.41
3597 7648 6.436738 TTGTAACACCCCTACATTTCTGTA 57.563 37.500 0.00 0.00 36.79 2.74
3598 7649 4.986054 TGTAACACCCCTACATTTCTGT 57.014 40.909 0.00 0.00 39.49 3.41
3599 7650 6.834168 AATTGTAACACCCCTACATTTCTG 57.166 37.500 0.00 0.00 0.00 3.02
3600 7651 6.780522 ACAAATTGTAACACCCCTACATTTCT 59.219 34.615 0.00 0.00 0.00 2.52
3601 7652 6.988522 ACAAATTGTAACACCCCTACATTTC 58.011 36.000 0.00 0.00 0.00 2.17
3602 7653 6.014925 GGACAAATTGTAACACCCCTACATTT 60.015 38.462 0.00 0.00 0.00 2.32
3603 7654 5.479027 GGACAAATTGTAACACCCCTACATT 59.521 40.000 0.00 0.00 0.00 2.71
3604 7655 5.014202 GGACAAATTGTAACACCCCTACAT 58.986 41.667 0.00 0.00 0.00 2.29
3605 7656 4.400120 GGACAAATTGTAACACCCCTACA 58.600 43.478 0.00 0.00 0.00 2.74
3606 7657 3.760151 GGGACAAATTGTAACACCCCTAC 59.240 47.826 11.33 0.00 29.50 3.18
3607 7658 3.398292 TGGGACAAATTGTAACACCCCTA 59.602 43.478 17.30 2.16 31.60 3.53
3608 7659 2.178106 TGGGACAAATTGTAACACCCCT 59.822 45.455 17.30 0.00 31.60 4.79
3609 7660 2.297880 GTGGGACAAATTGTAACACCCC 59.702 50.000 15.38 13.54 44.16 4.95
3610 7661 3.005367 CAGTGGGACAAATTGTAACACCC 59.995 47.826 21.23 17.19 44.16 4.61
3611 7662 3.886505 TCAGTGGGACAAATTGTAACACC 59.113 43.478 21.23 12.74 44.16 4.16
3612 7663 5.508200 TTCAGTGGGACAAATTGTAACAC 57.492 39.130 18.80 18.80 44.16 3.32
3613 7664 4.037446 GCTTCAGTGGGACAAATTGTAACA 59.963 41.667 0.00 0.00 44.16 2.41
3614 7665 4.278419 AGCTTCAGTGGGACAAATTGTAAC 59.722 41.667 0.00 0.00 44.16 2.50
3615 7666 4.469657 AGCTTCAGTGGGACAAATTGTAA 58.530 39.130 0.00 0.00 44.16 2.41
3616 7667 4.098914 AGCTTCAGTGGGACAAATTGTA 57.901 40.909 0.00 0.00 44.16 2.41
3617 7668 2.949447 AGCTTCAGTGGGACAAATTGT 58.051 42.857 0.00 0.00 44.16 2.71
3618 7669 3.820467 TGTAGCTTCAGTGGGACAAATTG 59.180 43.478 0.00 0.00 44.16 2.32
3619 7670 4.098914 TGTAGCTTCAGTGGGACAAATT 57.901 40.909 0.00 0.00 44.16 1.82
3620 7671 3.788227 TGTAGCTTCAGTGGGACAAAT 57.212 42.857 0.00 0.00 44.16 2.32
3621 7672 3.569194 TTGTAGCTTCAGTGGGACAAA 57.431 42.857 0.00 0.00 44.16 2.83
3622 7673 3.327757 AGATTGTAGCTTCAGTGGGACAA 59.672 43.478 0.00 0.00 44.16 3.18
3623 7674 2.906389 AGATTGTAGCTTCAGTGGGACA 59.094 45.455 0.00 0.00 0.00 4.02
3624 7675 3.618690 AGATTGTAGCTTCAGTGGGAC 57.381 47.619 0.00 0.00 0.00 4.46
3625 7676 3.327757 ACAAGATTGTAGCTTCAGTGGGA 59.672 43.478 0.00 0.00 40.16 4.37
3626 7677 3.679389 ACAAGATTGTAGCTTCAGTGGG 58.321 45.455 0.00 0.00 40.16 4.61
3627 7678 6.372659 ACAATACAAGATTGTAGCTTCAGTGG 59.627 38.462 10.85 0.00 45.80 4.00
3628 7679 7.369803 ACAATACAAGATTGTAGCTTCAGTG 57.630 36.000 10.85 1.69 45.80 3.66
3629 7680 7.880195 AGAACAATACAAGATTGTAGCTTCAGT 59.120 33.333 10.85 0.00 45.80 3.41
3630 7681 8.261492 AGAACAATACAAGATTGTAGCTTCAG 57.739 34.615 10.85 1.25 45.80 3.02
3631 7682 8.621532 AAGAACAATACAAGATTGTAGCTTCA 57.378 30.769 10.85 0.00 45.80 3.02
3634 7685 9.726438 ACTAAAGAACAATACAAGATTGTAGCT 57.274 29.630 10.85 0.00 45.80 3.32
3641 7692 9.485206 ACGTGTTACTAAAGAACAATACAAGAT 57.515 29.630 0.00 0.00 38.48 2.40
3642 7693 8.876275 ACGTGTTACTAAAGAACAATACAAGA 57.124 30.769 0.00 0.00 38.48 3.02
3643 7694 9.925268 AAACGTGTTACTAAAGAACAATACAAG 57.075 29.630 0.00 0.00 38.48 3.16
3644 7695 9.705471 CAAACGTGTTACTAAAGAACAATACAA 57.295 29.630 0.00 0.00 38.48 2.41
3645 7696 8.336806 CCAAACGTGTTACTAAAGAACAATACA 58.663 33.333 0.00 0.00 38.48 2.29
3646 7697 8.550376 TCCAAACGTGTTACTAAAGAACAATAC 58.450 33.333 0.00 0.00 38.48 1.89
3647 7698 8.659925 TCCAAACGTGTTACTAAAGAACAATA 57.340 30.769 0.00 0.00 38.48 1.90
3648 7699 7.556733 TCCAAACGTGTTACTAAAGAACAAT 57.443 32.000 0.00 0.00 38.48 2.71
3649 7700 6.457257 GCTCCAAACGTGTTACTAAAGAACAA 60.457 38.462 0.00 0.00 38.48 2.83
3650 7701 5.006941 GCTCCAAACGTGTTACTAAAGAACA 59.993 40.000 0.00 0.00 34.46 3.18
3651 7702 5.235831 AGCTCCAAACGTGTTACTAAAGAAC 59.764 40.000 0.00 0.00 0.00 3.01
3652 7703 5.362263 AGCTCCAAACGTGTTACTAAAGAA 58.638 37.500 0.00 0.00 0.00 2.52
3653 7704 4.952460 AGCTCCAAACGTGTTACTAAAGA 58.048 39.130 0.00 0.00 0.00 2.52
3654 7705 5.235616 TCAAGCTCCAAACGTGTTACTAAAG 59.764 40.000 0.00 0.00 0.00 1.85
3655 7706 5.117584 TCAAGCTCCAAACGTGTTACTAAA 58.882 37.500 0.00 0.00 0.00 1.85
3656 7707 4.695396 TCAAGCTCCAAACGTGTTACTAA 58.305 39.130 0.00 0.00 0.00 2.24
3657 7708 4.325028 TCAAGCTCCAAACGTGTTACTA 57.675 40.909 0.00 0.00 0.00 1.82
3658 7709 3.188159 TCAAGCTCCAAACGTGTTACT 57.812 42.857 0.00 0.00 0.00 2.24
3659 7710 3.955771 TTCAAGCTCCAAACGTGTTAC 57.044 42.857 0.00 0.00 0.00 2.50
3660 7711 6.811253 ATTATTCAAGCTCCAAACGTGTTA 57.189 33.333 0.00 0.00 0.00 2.41
3661 7712 5.705609 ATTATTCAAGCTCCAAACGTGTT 57.294 34.783 0.00 0.00 0.00 3.32
3662 7713 6.811253 TTATTATTCAAGCTCCAAACGTGT 57.189 33.333 0.00 0.00 0.00 4.49
3663 7714 8.687824 AAATTATTATTCAAGCTCCAAACGTG 57.312 30.769 0.00 0.00 0.00 4.49
3664 7715 9.705290 AAAAATTATTATTCAAGCTCCAAACGT 57.295 25.926 0.00 0.00 0.00 3.99
3691 7742 9.955102 CCAGGAATGAGAAGATAAATATGATCA 57.045 33.333 0.00 0.00 0.00 2.92
3697 7748 9.618890 CTGTTTCCAGGAATGAGAAGATAAATA 57.381 33.333 1.58 0.00 34.90 1.40
3698 7749 7.067981 GCTGTTTCCAGGAATGAGAAGATAAAT 59.932 37.037 1.58 0.00 39.22 1.40
3699 7750 6.375455 GCTGTTTCCAGGAATGAGAAGATAAA 59.625 38.462 1.58 0.00 39.22 1.40
3700 7751 5.882557 GCTGTTTCCAGGAATGAGAAGATAA 59.117 40.000 1.58 0.00 39.22 1.75
3701 7752 5.431765 GCTGTTTCCAGGAATGAGAAGATA 58.568 41.667 1.58 0.00 39.22 1.98
3702 7753 4.268359 GCTGTTTCCAGGAATGAGAAGAT 58.732 43.478 1.58 0.00 39.22 2.40
3703 7754 3.560025 GGCTGTTTCCAGGAATGAGAAGA 60.560 47.826 1.58 0.00 39.22 2.87
3704 7755 2.751806 GGCTGTTTCCAGGAATGAGAAG 59.248 50.000 1.58 0.00 39.22 2.85
3705 7756 2.376518 AGGCTGTTTCCAGGAATGAGAA 59.623 45.455 1.58 0.00 39.22 2.87
3706 7757 1.988107 AGGCTGTTTCCAGGAATGAGA 59.012 47.619 1.58 0.00 39.22 3.27
3707 7758 2.026449 AGAGGCTGTTTCCAGGAATGAG 60.026 50.000 1.58 3.23 39.22 2.90
3708 7759 1.988107 AGAGGCTGTTTCCAGGAATGA 59.012 47.619 1.58 0.00 39.22 2.57
3709 7760 2.503895 AGAGGCTGTTTCCAGGAATG 57.496 50.000 1.58 0.00 39.22 2.67
3710 7761 3.330701 TGTAAGAGGCTGTTTCCAGGAAT 59.669 43.478 1.58 0.00 39.22 3.01
3711 7762 2.708861 TGTAAGAGGCTGTTTCCAGGAA 59.291 45.455 0.90 0.00 39.22 3.36
3712 7763 2.303022 CTGTAAGAGGCTGTTTCCAGGA 59.697 50.000 0.90 0.00 35.89 3.86
3713 7764 2.303022 TCTGTAAGAGGCTGTTTCCAGG 59.697 50.000 17.71 5.83 38.67 4.45
3714 7765 3.685139 TCTGTAAGAGGCTGTTTCCAG 57.315 47.619 0.90 9.48 38.67 3.86
3726 7777 5.250774 AGCCTTTCCCTACATTTCTGTAAGA 59.749 40.000 0.00 0.00 44.68 2.10
3727 7778 5.355350 CAGCCTTTCCCTACATTTCTGTAAG 59.645 44.000 0.00 0.00 37.41 2.34
3728 7779 5.253330 CAGCCTTTCCCTACATTTCTGTAA 58.747 41.667 0.00 0.00 37.41 2.41
3729 7780 4.843728 CAGCCTTTCCCTACATTTCTGTA 58.156 43.478 0.00 0.00 36.79 2.74
3730 7781 3.690460 CAGCCTTTCCCTACATTTCTGT 58.310 45.455 0.00 0.00 39.49 3.41
3731 7782 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
3732 7783 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
3733 7784 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
3734 7785 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
3735 7786 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
3736 7787 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
3737 7788 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
3738 7789 0.535797 AGTACGCAGCCTTTCCCTAC 59.464 55.000 0.00 0.00 0.00 3.18
3739 7790 2.148446 TAGTACGCAGCCTTTCCCTA 57.852 50.000 0.00 0.00 0.00 3.53
3740 7791 1.497161 ATAGTACGCAGCCTTTCCCT 58.503 50.000 0.00 0.00 0.00 4.20
3741 7792 2.626743 TCTATAGTACGCAGCCTTTCCC 59.373 50.000 0.00 0.00 0.00 3.97
3742 7793 3.552478 GGTCTATAGTACGCAGCCTTTCC 60.552 52.174 0.00 0.00 0.00 3.13
3743 7794 3.552478 GGGTCTATAGTACGCAGCCTTTC 60.552 52.174 0.00 0.00 0.00 2.62
3744 7795 2.364647 GGGTCTATAGTACGCAGCCTTT 59.635 50.000 0.00 0.00 0.00 3.11
3745 7796 1.962100 GGGTCTATAGTACGCAGCCTT 59.038 52.381 0.00 0.00 0.00 4.35
3746 7797 1.133575 TGGGTCTATAGTACGCAGCCT 60.134 52.381 13.98 0.00 35.18 4.58
3747 7798 1.325355 TGGGTCTATAGTACGCAGCC 58.675 55.000 13.98 8.23 35.18 4.85
3748 7799 3.181478 ACTTTGGGTCTATAGTACGCAGC 60.181 47.826 16.00 2.07 40.36 5.25
3749 7800 4.360563 CACTTTGGGTCTATAGTACGCAG 58.639 47.826 16.00 11.29 40.36 5.18
3750 7801 3.131577 CCACTTTGGGTCTATAGTACGCA 59.868 47.826 13.98 13.98 37.94 5.24
3751 7802 3.131755 ACCACTTTGGGTCTATAGTACGC 59.868 47.826 0.00 6.13 43.37 4.42
3752 7803 4.996788 ACCACTTTGGGTCTATAGTACG 57.003 45.455 0.00 0.00 43.37 3.67
3762 7813 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
3763 7814 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
3764 7815 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
3765 7816 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
3766 7817 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
3767 7818 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
3768 7819 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
3769 7820 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
3776 7827 4.735599 AGGGTCCGGGGAAGGGTC 62.736 72.222 0.00 0.00 0.00 4.46
3792 7843 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
3795 7846 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
3796 7847 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
3797 7848 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
3798 7849 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
3804 7855 2.897350 GCCCGGTGCATGTAGCTC 60.897 66.667 11.25 0.00 45.94 4.09
3805 7856 3.402681 AGCCCGGTGCATGTAGCT 61.403 61.111 15.92 4.82 45.94 3.32
3806 7857 3.204827 CAGCCCGGTGCATGTAGC 61.205 66.667 15.92 2.56 44.83 3.58
3807 7858 3.204827 GCAGCCCGGTGCATGTAG 61.205 66.667 13.70 0.91 43.41 2.74
3808 7859 4.794648 GGCAGCCCGGTGCATGTA 62.795 66.667 19.47 0.00 45.93 2.29
3833 7884 9.624373 GCATCATACCCATGAGAAGATAAATAT 57.376 33.333 0.00 0.00 44.30 1.28
3834 7885 8.605065 TGCATCATACCCATGAGAAGATAAATA 58.395 33.333 0.00 0.00 44.30 1.40
3835 7886 7.392673 GTGCATCATACCCATGAGAAGATAAAT 59.607 37.037 0.00 0.00 44.30 1.40
3836 7887 6.712095 GTGCATCATACCCATGAGAAGATAAA 59.288 38.462 0.00 0.00 44.30 1.40
3837 7888 6.183361 TGTGCATCATACCCATGAGAAGATAA 60.183 38.462 0.00 0.00 44.30 1.75
3838 7889 5.307716 TGTGCATCATACCCATGAGAAGATA 59.692 40.000 0.00 0.00 44.30 1.98
3854 7905 4.895668 TCTATCCATAGCATGTGCATCA 57.104 40.909 7.83 0.00 45.16 3.07
3896 7948 7.710907 GCATCCATCTCATTAACACAGTAGTAA 59.289 37.037 0.00 0.00 0.00 2.24
3904 7956 6.630444 ATTCTGCATCCATCTCATTAACAC 57.370 37.500 0.00 0.00 0.00 3.32
3909 7961 6.111382 CGGTATATTCTGCATCCATCTCATT 58.889 40.000 0.00 0.00 0.00 2.57
3932 7984 8.338259 AGCTATATTACATTTCAAGTTTCAGCG 58.662 33.333 0.00 0.00 0.00 5.18
3958 8011 1.783071 TGTGCATGAGTACGGGGATA 58.217 50.000 0.00 0.00 32.48 2.59
3964 8017 2.959516 TCTTCCTTGTGCATGAGTACG 58.040 47.619 0.00 0.00 32.48 3.67
4047 8100 3.058224 ACTTCAGACGGTAATTGCAAAGC 60.058 43.478 1.71 0.00 0.00 3.51
4459 9028 4.470304 AGTAGGTCACCTGGAGTAAAATCC 59.530 45.833 6.61 0.00 40.03 3.01
4496 9118 3.466881 CCGACACCAAGGGAGACA 58.533 61.111 0.00 0.00 0.00 3.41
4692 9314 2.338620 CTGAGGCACGGACGACAA 59.661 61.111 0.00 0.00 0.00 3.18
4768 9393 1.917282 AGGCAGCCAAGCTCTGAGA 60.917 57.895 15.80 0.00 36.40 3.27
4814 9439 3.286751 GTGCTGAACCTTGGCGCA 61.287 61.111 10.83 0.00 36.61 6.09
4841 9466 1.730121 CGCCAAACATGTGCAGCTAAG 60.730 52.381 0.00 0.00 0.00 2.18
4842 9467 0.240678 CGCCAAACATGTGCAGCTAA 59.759 50.000 0.00 0.00 0.00 3.09
4853 9478 3.345808 GAGACGCAGCGCCAAACA 61.346 61.111 16.61 0.00 0.00 2.83
4856 9481 3.899981 AATGGAGACGCAGCGCCAA 62.900 57.895 16.61 0.00 41.12 4.52
4886 9511 1.150536 GGTGGGTTGTTCAGGAGCA 59.849 57.895 0.00 0.00 0.00 4.26
4887 9512 0.467290 TTGGTGGGTTGTTCAGGAGC 60.467 55.000 0.00 0.00 0.00 4.70
5264 9889 3.692406 GGGAGGACGAACGCCAGT 61.692 66.667 0.00 0.00 0.00 4.00
5330 9955 2.027377 CCTGAACTTCTCCATGTGCTCT 60.027 50.000 0.00 0.00 0.00 4.09
5380 10005 7.175119 GCCCTGTAAAACTTCTCTCTAAAATGT 59.825 37.037 0.00 0.00 0.00 2.71
5446 10071 6.446318 TGTTCATTTGAAACTTCAGGCATAC 58.554 36.000 0.00 0.00 38.61 2.39
5763 10395 1.064906 CCTCCTCCCACGTACTGAGTA 60.065 57.143 0.00 0.00 0.00 2.59
5770 10402 0.677731 CACGTACCTCCTCCCACGTA 60.678 60.000 0.00 0.00 45.09 3.57
5771 10403 2.437897 ACGTACCTCCTCCCACGT 59.562 61.111 0.00 0.00 42.36 4.49
5773 10405 2.356780 CCCACGTACCTCCTCCCAC 61.357 68.421 0.00 0.00 0.00 4.61
5774 10406 2.038329 CCCACGTACCTCCTCCCA 59.962 66.667 0.00 0.00 0.00 4.37
5776 10408 1.036481 GTCTCCCACGTACCTCCTCC 61.036 65.000 0.00 0.00 0.00 4.30
5778 10410 1.378250 CGTCTCCCACGTACCTCCT 60.378 63.158 0.00 0.00 44.07 3.69
5825 10462 9.642343 AATCAGGTTTAAGGAAAACTAGTTCTT 57.358 29.630 8.95 10.53 40.80 2.52
5837 10474 5.319043 ACACCAGAAATCAGGTTTAAGGA 57.681 39.130 3.84 0.00 33.10 3.36
6241 10879 2.890945 CCCTCCGGTGACAAATTCTTTT 59.109 45.455 4.76 0.00 0.00 2.27
6279 10918 1.538047 GGTGTCATGCATGTTGGTCT 58.462 50.000 25.43 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.