Multiple sequence alignment - TraesCS2A01G353100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G353100 chr2A 100.000 2807 0 0 1 2807 593508102 593510908 0.000000e+00 5184.0
1 TraesCS2A01G353100 chr2A 92.369 249 19 0 399 647 575349267 575349019 3.440000e-94 355.0
2 TraesCS2A01G353100 chr2D 94.172 1716 56 15 645 2338 449510580 449508887 0.000000e+00 2575.0
3 TraesCS2A01G353100 chr2D 95.739 352 12 2 29 377 449510930 449510579 5.250000e-157 564.0
4 TraesCS2A01G353100 chr2D 92.000 250 20 0 400 649 588718032 588717783 4.450000e-93 351.0
5 TraesCS2A01G353100 chr2B 92.415 1714 73 21 741 2412 529109901 529111599 0.000000e+00 2392.0
6 TraesCS2A01G353100 chr2B 92.339 248 19 0 399 646 764842139 764841892 1.240000e-93 353.0
7 TraesCS2A01G353100 chr2B 89.732 224 13 5 109 326 529109070 529109289 7.660000e-71 278.0
8 TraesCS2A01G353100 chr5D 81.224 719 103 23 1111 1807 366906261 366906969 4.090000e-153 551.0
9 TraesCS2A01G353100 chr5D 91.968 249 20 0 399 647 446271664 446271912 1.600000e-92 350.0
10 TraesCS2A01G353100 chr5B 80.435 736 112 23 1094 1807 434036851 434037576 1.480000e-147 532.0
11 TraesCS2A01G353100 chr5B 86.911 191 20 4 2618 2807 394271643 394271829 2.830000e-50 209.0
12 TraesCS2A01G353100 chr5A 80.195 717 115 19 1110 1807 468931727 468932435 1.930000e-141 512.0
13 TraesCS2A01G353100 chr5A 90.323 124 12 0 1570 1693 502061824 502061947 2.240000e-36 163.0
14 TraesCS2A01G353100 chr5A 89.516 124 13 0 1570 1693 454765401 454765524 1.040000e-34 158.0
15 TraesCS2A01G353100 chr1B 92.490 253 18 1 399 650 642774627 642774375 7.390000e-96 361.0
16 TraesCS2A01G353100 chr1B 92.105 190 14 1 2618 2807 413566238 413566050 1.660000e-67 267.0
17 TraesCS2A01G353100 chr1B 90.426 188 17 1 2620 2807 413709691 413709505 2.160000e-61 246.0
18 TraesCS2A01G353100 chr1B 88.947 190 18 2 2618 2807 336600131 336599945 6.050000e-57 231.0
19 TraesCS2A01G353100 chr3A 92.369 249 18 1 399 647 13523412 13523165 1.240000e-93 353.0
20 TraesCS2A01G353100 chr7B 91.968 249 20 0 399 647 737371273 737371521 1.600000e-92 350.0
21 TraesCS2A01G353100 chr7B 100.000 30 0 0 2377 2406 744443178 744443149 3.910000e-04 56.5
22 TraesCS2A01G353100 chr7B 100.000 30 0 0 2377 2406 744481582 744481553 3.910000e-04 56.5
23 TraesCS2A01G353100 chr7B 100.000 29 0 0 2378 2406 744526396 744526368 1.000000e-03 54.7
24 TraesCS2A01G353100 chr3B 90.840 262 22 1 400 659 772260758 772261019 1.600000e-92 350.0
25 TraesCS2A01G353100 chr3B 90.458 262 23 1 400 659 772187235 772187496 7.440000e-91 344.0
26 TraesCS2A01G353100 chr3B 89.474 190 16 3 2618 2807 496611478 496611293 1.300000e-58 237.0
27 TraesCS2A01G353100 chr3B 85.507 69 8 1 2379 2445 269148794 269148726 1.390000e-08 71.3
28 TraesCS2A01G353100 chr6B 90.052 191 14 4 2617 2807 687504826 687504641 2.790000e-60 243.0
29 TraesCS2A01G353100 chr6B 85.638 188 22 4 2618 2804 525077357 525077540 2.850000e-45 193.0
30 TraesCS2A01G353100 chr6B 89.516 124 13 0 1570 1693 543724401 543724524 1.040000e-34 158.0
31 TraesCS2A01G353100 chrUn 90.503 179 17 0 1515 1693 42863630 42863452 1.300000e-58 237.0
32 TraesCS2A01G353100 chrUn 83.957 187 26 3 2621 2807 386501208 386501390 2.870000e-40 176.0
33 TraesCS2A01G353100 chr6D 87.027 185 19 5 2624 2807 353369338 353369158 1.320000e-48 204.0
34 TraesCS2A01G353100 chr6A 89.516 124 13 0 1570 1693 593803656 593803533 1.040000e-34 158.0
35 TraesCS2A01G353100 chr6A 89.831 118 12 0 1576 1693 585417181 585417064 4.840000e-33 152.0
36 TraesCS2A01G353100 chr4A 89.474 57 3 3 2225 2280 522922164 522922218 5.020000e-08 69.4
37 TraesCS2A01G353100 chr4A 86.441 59 5 2 2229 2286 726091281 726091225 8.400000e-06 62.1
38 TraesCS2A01G353100 chr4A 100.000 28 0 0 1355 1382 538831610 538831637 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G353100 chr2A 593508102 593510908 2806 False 5184.0 5184 100.0000 1 2807 1 chr2A.!!$F1 2806
1 TraesCS2A01G353100 chr2D 449508887 449510930 2043 True 1569.5 2575 94.9555 29 2338 2 chr2D.!!$R2 2309
2 TraesCS2A01G353100 chr2B 529109070 529111599 2529 False 1335.0 2392 91.0735 109 2412 2 chr2B.!!$F1 2303
3 TraesCS2A01G353100 chr5D 366906261 366906969 708 False 551.0 551 81.2240 1111 1807 1 chr5D.!!$F1 696
4 TraesCS2A01G353100 chr5B 434036851 434037576 725 False 532.0 532 80.4350 1094 1807 1 chr5B.!!$F2 713
5 TraesCS2A01G353100 chr5A 468931727 468932435 708 False 512.0 512 80.1950 1110 1807 1 chr5A.!!$F2 697

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
746 1259 0.251165 AAATGGACAACAGGACCCGG 60.251 55.0 0.0 0.0 0.0 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2609 3191 0.035439 AATGCCCTAACACGGTCCAG 60.035 55.0 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.558226 TCTGGCTGATGTTCAAGTACAT 57.442 40.909 0.00 0.00 41.30 2.29
22 23 4.256110 TCTGGCTGATGTTCAAGTACATG 58.744 43.478 0.00 0.00 38.80 3.21
23 24 3.346315 TGGCTGATGTTCAAGTACATGG 58.654 45.455 0.00 0.00 38.80 3.66
24 25 3.008923 TGGCTGATGTTCAAGTACATGGA 59.991 43.478 0.00 0.00 38.80 3.41
25 26 4.202441 GGCTGATGTTCAAGTACATGGAT 58.798 43.478 0.00 0.00 38.80 3.41
26 27 5.104569 TGGCTGATGTTCAAGTACATGGATA 60.105 40.000 0.00 0.00 38.80 2.59
27 28 5.822519 GGCTGATGTTCAAGTACATGGATAA 59.177 40.000 0.00 0.00 38.80 1.75
81 82 8.439172 AGGTACTACAAAAACATACCAAGGTAA 58.561 33.333 2.62 0.00 38.21 2.85
82 83 9.065798 GGTACTACAAAAACATACCAAGGTAAA 57.934 33.333 2.62 0.00 36.18 2.01
126 128 6.576662 ATCGATGTGGTATACAAGGACTAG 57.423 41.667 5.01 0.00 43.77 2.57
322 327 5.192927 CCTGCAATGGTTATAACTTGAGGA 58.807 41.667 17.35 7.06 0.00 3.71
386 899 9.901172 ATTAAACTTTCATTATACTCCCTTCGT 57.099 29.630 0.00 0.00 0.00 3.85
387 900 7.845066 AAACTTTCATTATACTCCCTTCGTC 57.155 36.000 0.00 0.00 0.00 4.20
388 901 6.793505 ACTTTCATTATACTCCCTTCGTCT 57.206 37.500 0.00 0.00 0.00 4.18
389 902 7.184067 ACTTTCATTATACTCCCTTCGTCTT 57.816 36.000 0.00 0.00 0.00 3.01
390 903 7.621796 ACTTTCATTATACTCCCTTCGTCTTT 58.378 34.615 0.00 0.00 0.00 2.52
391 904 7.549488 ACTTTCATTATACTCCCTTCGTCTTTG 59.451 37.037 0.00 0.00 0.00 2.77
392 905 6.785337 TCATTATACTCCCTTCGTCTTTGA 57.215 37.500 0.00 0.00 0.00 2.69
393 906 7.177832 TCATTATACTCCCTTCGTCTTTGAA 57.822 36.000 0.00 0.00 0.00 2.69
394 907 7.617225 TCATTATACTCCCTTCGTCTTTGAAA 58.383 34.615 0.00 0.00 0.00 2.69
395 908 7.764443 TCATTATACTCCCTTCGTCTTTGAAAG 59.236 37.037 0.00 0.00 0.00 2.62
396 909 5.740290 ATACTCCCTTCGTCTTTGAAAGA 57.260 39.130 3.02 3.02 34.51 2.52
397 910 4.417426 ACTCCCTTCGTCTTTGAAAGAA 57.583 40.909 9.51 0.00 39.67 2.52
398 911 4.381411 ACTCCCTTCGTCTTTGAAAGAAG 58.619 43.478 9.51 11.77 39.67 2.85
399 912 4.101119 ACTCCCTTCGTCTTTGAAAGAAGA 59.899 41.667 17.44 17.44 42.84 2.87
406 919 6.589830 TCGTCTTTGAAAGAAGAAAGAGTG 57.410 37.500 18.72 0.00 41.86 3.51
407 920 6.106673 TCGTCTTTGAAAGAAGAAAGAGTGT 58.893 36.000 18.72 0.00 41.86 3.55
408 921 7.262772 TCGTCTTTGAAAGAAGAAAGAGTGTA 58.737 34.615 18.72 0.00 41.86 2.90
409 922 7.222224 TCGTCTTTGAAAGAAGAAAGAGTGTAC 59.778 37.037 18.72 0.00 41.86 2.90
410 923 7.222999 CGTCTTTGAAAGAAGAAAGAGTGTACT 59.777 37.037 14.37 0.00 38.55 2.73
411 924 8.884726 GTCTTTGAAAGAAGAAAGAGTGTACTT 58.115 33.333 9.51 0.00 38.55 2.24
412 925 9.449719 TCTTTGAAAGAAGAAAGAGTGTACTTT 57.550 29.630 4.94 0.00 37.40 2.66
413 926 9.495754 CTTTGAAAGAAGAAAGAGTGTACTTTG 57.504 33.333 0.00 0.00 39.71 2.77
414 927 8.786826 TTGAAAGAAGAAAGAGTGTACTTTGA 57.213 30.769 0.00 0.00 39.71 2.69
415 928 8.786826 TGAAAGAAGAAAGAGTGTACTTTGAA 57.213 30.769 0.00 0.00 39.71 2.69
416 929 8.665685 TGAAAGAAGAAAGAGTGTACTTTGAAC 58.334 33.333 0.00 0.00 39.71 3.18
417 930 8.794335 AAAGAAGAAAGAGTGTACTTTGAACT 57.206 30.769 0.00 0.00 39.71 3.01
418 931 8.794335 AAGAAGAAAGAGTGTACTTTGAACTT 57.206 30.769 0.00 0.00 39.71 2.66
419 932 8.794335 AGAAGAAAGAGTGTACTTTGAACTTT 57.206 30.769 0.00 0.00 39.71 2.66
420 933 9.886132 AGAAGAAAGAGTGTACTTTGAACTTTA 57.114 29.630 0.00 0.00 39.71 1.85
503 1016 9.791801 TTATGCCATCAAATTAGTAGCATTAGA 57.208 29.630 0.00 0.00 39.89 2.10
504 1017 8.874744 ATGCCATCAAATTAGTAGCATTAGAT 57.125 30.769 0.00 0.00 36.10 1.98
505 1018 8.696043 TGCCATCAAATTAGTAGCATTAGATT 57.304 30.769 0.00 0.00 0.00 2.40
506 1019 8.786898 TGCCATCAAATTAGTAGCATTAGATTC 58.213 33.333 0.00 0.00 0.00 2.52
507 1020 8.786898 GCCATCAAATTAGTAGCATTAGATTCA 58.213 33.333 0.00 0.00 0.00 2.57
574 1087 9.439500 AAGCATTGATATATTTTTGCACAAACT 57.561 25.926 0.00 0.00 32.66 2.66
575 1088 9.090692 AGCATTGATATATTTTTGCACAAACTC 57.909 29.630 0.00 0.00 32.66 3.01
576 1089 8.051909 GCATTGATATATTTTTGCACAAACTCG 58.948 33.333 0.00 0.00 0.00 4.18
577 1090 9.288124 CATTGATATATTTTTGCACAAACTCGA 57.712 29.630 0.00 0.00 0.00 4.04
579 1092 9.502145 TTGATATATTTTTGCACAAACTCGATC 57.498 29.630 0.00 3.02 0.00 3.69
580 1093 8.672815 TGATATATTTTTGCACAAACTCGATCA 58.327 29.630 0.00 5.33 0.00 2.92
581 1094 9.502145 GATATATTTTTGCACAAACTCGATCAA 57.498 29.630 0.00 0.00 0.00 2.57
582 1095 9.853555 ATATATTTTTGCACAAACTCGATCAAA 57.146 25.926 0.00 0.00 0.00 2.69
583 1096 5.694674 TTTTTGCACAAACTCGATCAAAC 57.305 34.783 0.00 0.00 0.00 2.93
584 1097 4.630894 TTTGCACAAACTCGATCAAACT 57.369 36.364 0.00 0.00 0.00 2.66
585 1098 4.630894 TTGCACAAACTCGATCAAACTT 57.369 36.364 0.00 0.00 0.00 2.66
586 1099 4.630894 TGCACAAACTCGATCAAACTTT 57.369 36.364 0.00 0.00 0.00 2.66
587 1100 4.350346 TGCACAAACTCGATCAAACTTTG 58.650 39.130 0.00 0.00 0.00 2.77
588 1101 4.095632 TGCACAAACTCGATCAAACTTTGA 59.904 37.500 6.67 6.67 45.01 2.69
589 1102 4.672413 GCACAAACTCGATCAAACTTTGAG 59.328 41.667 9.97 0.00 43.98 3.02
590 1103 5.504010 GCACAAACTCGATCAAACTTTGAGA 60.504 40.000 9.97 2.59 43.98 3.27
591 1104 6.662616 CACAAACTCGATCAAACTTTGAGAT 58.337 36.000 9.97 0.00 43.98 2.75
592 1105 7.571244 GCACAAACTCGATCAAACTTTGAGATA 60.571 37.037 9.97 0.00 43.98 1.98
593 1106 7.954248 CACAAACTCGATCAAACTTTGAGATAG 59.046 37.037 9.97 8.62 43.98 2.08
594 1107 7.657761 ACAAACTCGATCAAACTTTGAGATAGT 59.342 33.333 9.97 9.14 43.98 2.12
595 1108 8.499162 CAAACTCGATCAAACTTTGAGATAGTT 58.501 33.333 9.97 13.43 43.98 2.24
596 1109 8.608844 AACTCGATCAAACTTTGAGATAGTTT 57.391 30.769 9.97 0.00 44.38 2.66
605 1118 8.924511 AAACTTTGAGATAGTTTGATCCTTCA 57.075 30.769 0.00 0.00 42.54 3.02
606 1119 8.924511 AACTTTGAGATAGTTTGATCCTTCAA 57.075 30.769 0.00 0.00 40.09 2.69
607 1120 8.329203 ACTTTGAGATAGTTTGATCCTTCAAC 57.671 34.615 0.00 0.00 41.50 3.18
608 1121 7.939039 ACTTTGAGATAGTTTGATCCTTCAACA 59.061 33.333 0.00 0.00 41.50 3.33
609 1122 8.690203 TTTGAGATAGTTTGATCCTTCAACAA 57.310 30.769 0.00 0.00 41.50 2.83
610 1123 8.690203 TTGAGATAGTTTGATCCTTCAACAAA 57.310 30.769 0.00 0.00 41.50 2.83
611 1124 8.690203 TGAGATAGTTTGATCCTTCAACAAAA 57.310 30.769 0.00 0.00 41.50 2.44
612 1125 9.300681 TGAGATAGTTTGATCCTTCAACAAAAT 57.699 29.630 0.00 0.00 41.50 1.82
614 1127 9.918630 AGATAGTTTGATCCTTCAACAAAATTG 57.081 29.630 0.00 0.00 41.50 2.32
615 1128 9.912634 GATAGTTTGATCCTTCAACAAAATTGA 57.087 29.630 0.00 0.00 41.50 2.57
618 1131 9.447157 AGTTTGATCCTTCAACAAAATTGAAAA 57.553 25.926 0.00 0.00 41.50 2.29
638 1151 9.947433 TTGAAAATATACTCTTTAAAGGACGGA 57.053 29.630 15.13 1.87 0.00 4.69
639 1152 9.595823 TGAAAATATACTCTTTAAAGGACGGAG 57.404 33.333 15.13 7.51 0.00 4.63
640 1153 8.959705 AAAATATACTCTTTAAAGGACGGAGG 57.040 34.615 15.13 1.00 0.00 4.30
641 1154 6.667558 ATATACTCTTTAAAGGACGGAGGG 57.332 41.667 15.13 0.00 0.00 4.30
642 1155 2.898662 ACTCTTTAAAGGACGGAGGGA 58.101 47.619 15.13 0.00 0.00 4.20
643 1156 2.832733 ACTCTTTAAAGGACGGAGGGAG 59.167 50.000 15.13 4.81 0.00 4.30
653 1166 0.394899 ACGGAGGGAGTAGGTTACCG 60.395 60.000 0.00 0.00 43.61 4.02
661 1174 2.104281 GGAGTAGGTTACCGATGGCAAT 59.896 50.000 0.00 0.00 0.00 3.56
679 1192 4.500375 GGCAATTCCTTCTGACCATATTGC 60.500 45.833 0.00 0.00 43.26 3.56
689 1202 7.552687 CCTTCTGACCATATTGCTGTTTAAGTA 59.447 37.037 0.00 0.00 0.00 2.24
711 1224 8.996651 AGTAGAATTAAGGGGACATTAAATGG 57.003 34.615 0.00 0.00 33.60 3.16
715 1228 2.938428 AGGGGACATTAAATGGGCAA 57.062 45.000 0.00 0.00 33.60 4.52
720 1233 3.132824 GGGACATTAAATGGGCAAAGGAG 59.867 47.826 0.00 0.00 33.60 3.69
737 1250 5.774498 AAGGAGTTGAAGAAATGGACAAC 57.226 39.130 0.00 0.00 41.61 3.32
739 1252 4.823989 AGGAGTTGAAGAAATGGACAACAG 59.176 41.667 0.00 0.00 43.06 3.16
740 1253 4.022849 GGAGTTGAAGAAATGGACAACAGG 60.023 45.833 0.00 0.00 43.06 4.00
741 1254 4.792068 AGTTGAAGAAATGGACAACAGGA 58.208 39.130 0.00 0.00 43.06 3.86
742 1255 4.580580 AGTTGAAGAAATGGACAACAGGAC 59.419 41.667 0.00 0.00 43.06 3.85
743 1256 3.486383 TGAAGAAATGGACAACAGGACC 58.514 45.455 0.00 0.00 0.00 4.46
744 1257 2.586648 AGAAATGGACAACAGGACCC 57.413 50.000 0.00 0.00 0.00 4.46
745 1258 1.165270 GAAATGGACAACAGGACCCG 58.835 55.000 0.00 0.00 0.00 5.28
746 1259 0.251165 AAATGGACAACAGGACCCGG 60.251 55.000 0.00 0.00 0.00 5.73
747 1260 2.137177 AATGGACAACAGGACCCGGG 62.137 60.000 22.25 22.25 0.00 5.73
748 1261 4.029809 GGACAACAGGACCCGGGG 62.030 72.222 27.92 12.73 0.00 5.73
749 1262 2.926242 GACAACAGGACCCGGGGA 60.926 66.667 27.92 0.00 0.00 4.81
750 1263 3.246880 ACAACAGGACCCGGGGAC 61.247 66.667 27.92 17.50 0.00 4.46
751 1264 3.246112 CAACAGGACCCGGGGACA 61.246 66.667 27.92 0.00 0.00 4.02
752 1265 2.448931 AACAGGACCCGGGGACAA 60.449 61.111 27.92 0.00 0.00 3.18
753 1266 2.526046 AACAGGACCCGGGGACAAG 61.526 63.158 27.92 15.41 0.00 3.16
754 1267 2.606519 CAGGACCCGGGGACAAGA 60.607 66.667 27.92 0.00 0.00 3.02
761 1274 0.958822 CCCGGGGACAAGAAAACAAG 59.041 55.000 14.71 0.00 0.00 3.16
765 1278 3.412386 CGGGGACAAGAAAACAAGAGAT 58.588 45.455 0.00 0.00 0.00 2.75
775 1288 3.904136 AAACAAGAGATCAAGCAACCG 57.096 42.857 0.00 0.00 0.00 4.44
781 1294 0.957395 AGATCAAGCAACCGCCACAG 60.957 55.000 0.00 0.00 39.83 3.66
810 1328 6.353323 CCAAAAAGGAAAAATGGTAACCACT 58.647 36.000 0.00 0.00 41.22 4.00
821 1346 5.873179 ATGGTAACCACTACAAAATCACG 57.127 39.130 0.00 0.00 35.80 4.35
823 1348 5.553123 TGGTAACCACTACAAAATCACGAT 58.447 37.500 0.00 0.00 31.45 3.73
899 1424 1.302033 ACAAAGCCAGCTCACCTCG 60.302 57.895 0.00 0.00 0.00 4.63
970 1503 3.775654 CTCCCACTCGGCCACTCC 61.776 72.222 2.24 0.00 0.00 3.85
971 1504 4.631740 TCCCACTCGGCCACTCCA 62.632 66.667 2.24 0.00 34.01 3.86
972 1505 4.394712 CCCACTCGGCCACTCCAC 62.395 72.222 2.24 0.00 34.01 4.02
973 1506 3.314331 CCACTCGGCCACTCCACT 61.314 66.667 2.24 0.00 34.01 4.00
974 1507 2.047844 CACTCGGCCACTCCACTG 60.048 66.667 2.24 0.00 34.01 3.66
975 1508 4.008933 ACTCGGCCACTCCACTGC 62.009 66.667 2.24 0.00 34.01 4.40
976 1509 4.767255 CTCGGCCACTCCACTGCC 62.767 72.222 2.24 0.00 41.85 4.85
979 1512 4.767255 GGCCACTCCACTGCCTCG 62.767 72.222 0.00 0.00 42.01 4.63
1109 1642 4.778143 AGCTAAGGCGCCCGTTGG 62.778 66.667 26.15 15.39 44.37 3.77
1473 2006 1.513158 CATCAAGACGGACGCCTCT 59.487 57.895 0.00 0.00 0.00 3.69
1716 2261 1.517832 CGCCGACCAGAGGAAGAAT 59.482 57.895 0.00 0.00 0.00 2.40
1867 2418 3.047280 TGTGTCGGTGGATTGCGC 61.047 61.111 0.00 0.00 0.00 6.09
1993 2544 6.403866 TGGTGTGATAAAGCAGTTTGAATT 57.596 33.333 0.00 0.00 0.00 2.17
1995 2546 6.700960 TGGTGTGATAAAGCAGTTTGAATTTG 59.299 34.615 0.00 0.00 0.00 2.32
2035 2586 2.437200 AACCGATGGTTTTGCATGTG 57.563 45.000 0.00 0.00 44.33 3.21
2041 2592 3.550639 CGATGGTTTTGCATGTGTCAACT 60.551 43.478 0.00 0.00 0.00 3.16
2044 2595 2.100584 GGTTTTGCATGTGTCAACTGGA 59.899 45.455 0.00 0.00 0.00 3.86
2089 2642 5.555017 TCTTTTGAGAATCCTTCTGGAGTG 58.445 41.667 0.00 0.00 46.91 3.51
2126 2680 4.454678 TGGAGTGTTTGGATAGATCATGC 58.545 43.478 0.00 0.00 0.00 4.06
2133 2687 6.763135 GTGTTTGGATAGATCATGCTGTTCTA 59.237 38.462 0.00 6.48 34.36 2.10
2201 2768 0.601841 GTTTTCTTCCGCGGACCAGA 60.602 55.000 31.19 26.22 0.00 3.86
2223 2790 0.030235 GTGGGAAAAGTGCACGAACC 59.970 55.000 12.01 13.19 0.00 3.62
2228 2795 2.481185 GGAAAAGTGCACGAACCGATTA 59.519 45.455 12.01 0.00 0.00 1.75
2231 2798 4.759516 AAAGTGCACGAACCGATTATTT 57.240 36.364 12.01 0.00 0.00 1.40
2280 2850 3.740044 ATCAAAGGTTACAATCACGCG 57.260 42.857 3.53 3.53 0.00 6.01
2291 2861 3.258228 ACAATCACGCGTGACAATATCA 58.742 40.909 41.29 19.43 43.11 2.15
2318 2888 2.108250 ACACTTTGACCATACCCAAGCT 59.892 45.455 0.00 0.00 0.00 3.74
2346 2916 2.817258 CAATTCGCCCTTGTCTACCAAA 59.183 45.455 0.00 0.00 31.20 3.28
2349 2919 3.149005 TCGCCCTTGTCTACCAAAATT 57.851 42.857 0.00 0.00 31.20 1.82
2350 2920 3.492337 TCGCCCTTGTCTACCAAAATTT 58.508 40.909 0.00 0.00 31.20 1.82
2355 2925 4.020307 CCCTTGTCTACCAAAATTTGCCAT 60.020 41.667 0.00 0.00 31.20 4.40
2356 2926 5.512921 CCCTTGTCTACCAAAATTTGCCATT 60.513 40.000 0.00 0.00 31.20 3.16
2357 2927 6.295575 CCCTTGTCTACCAAAATTTGCCATTA 60.296 38.462 0.00 0.00 31.20 1.90
2370 2948 8.907222 AAATTTGCCATTACAAGAGTTTTGAT 57.093 26.923 0.00 0.00 0.00 2.57
2399 2981 8.920665 CGAGAATTACTCTTATAAAGGATGCTG 58.079 37.037 0.00 0.00 42.92 4.41
2402 2984 9.213799 GAATTACTCTTATAAAGGATGCTGGAG 57.786 37.037 0.00 0.00 0.00 3.86
2412 2994 1.075525 ATGCTGGAGTACCCGCCTA 60.076 57.895 0.00 0.00 44.05 3.93
2413 2995 1.115930 ATGCTGGAGTACCCGCCTAG 61.116 60.000 0.00 0.00 44.05 3.02
2414 2996 1.757340 GCTGGAGTACCCGCCTAGT 60.757 63.158 0.00 0.00 39.87 2.57
2415 2997 2.017559 GCTGGAGTACCCGCCTAGTG 62.018 65.000 0.00 0.00 39.87 2.74
2416 2998 0.683504 CTGGAGTACCCGCCTAGTGT 60.684 60.000 0.00 0.00 37.93 3.55
2417 2999 0.968901 TGGAGTACCCGCCTAGTGTG 60.969 60.000 0.00 0.00 37.93 3.82
2418 3000 0.682209 GGAGTACCCGCCTAGTGTGA 60.682 60.000 0.00 0.00 0.00 3.58
2419 3001 0.739561 GAGTACCCGCCTAGTGTGAG 59.260 60.000 0.00 0.00 0.00 3.51
2420 3002 0.039326 AGTACCCGCCTAGTGTGAGT 59.961 55.000 0.00 0.00 0.00 3.41
2421 3003 0.455005 GTACCCGCCTAGTGTGAGTC 59.545 60.000 0.00 0.00 0.00 3.36
2422 3004 0.330604 TACCCGCCTAGTGTGAGTCT 59.669 55.000 0.00 0.00 0.00 3.24
2423 3005 0.542232 ACCCGCCTAGTGTGAGTCTT 60.542 55.000 0.00 0.00 0.00 3.01
2424 3006 0.173708 CCCGCCTAGTGTGAGTCTTC 59.826 60.000 0.00 0.00 0.00 2.87
2425 3007 0.179161 CCGCCTAGTGTGAGTCTTCG 60.179 60.000 0.00 0.00 0.00 3.79
2426 3008 0.798771 CGCCTAGTGTGAGTCTTCGC 60.799 60.000 0.00 0.00 0.00 4.70
2427 3009 0.798771 GCCTAGTGTGAGTCTTCGCG 60.799 60.000 0.00 0.00 36.61 5.87
2428 3010 0.179161 CCTAGTGTGAGTCTTCGCGG 60.179 60.000 6.13 0.00 36.61 6.46
2429 3011 0.179161 CTAGTGTGAGTCTTCGCGGG 60.179 60.000 6.13 0.00 36.61 6.13
2430 3012 2.209064 TAGTGTGAGTCTTCGCGGGC 62.209 60.000 6.13 0.00 36.61 6.13
2431 3013 4.717629 TGTGAGTCTTCGCGGGCG 62.718 66.667 6.13 6.74 36.61 6.13
2446 3028 3.706140 GCGAGAATGCCCTACACG 58.294 61.111 0.00 0.00 0.00 4.49
2447 3029 1.141019 GCGAGAATGCCCTACACGA 59.859 57.895 0.00 0.00 0.00 4.35
2448 3030 1.146358 GCGAGAATGCCCTACACGAC 61.146 60.000 0.00 0.00 0.00 4.34
2449 3031 0.172578 CGAGAATGCCCTACACGACA 59.827 55.000 0.00 0.00 0.00 4.35
2450 3032 1.202417 CGAGAATGCCCTACACGACAT 60.202 52.381 0.00 0.00 0.00 3.06
2451 3033 2.034179 CGAGAATGCCCTACACGACATA 59.966 50.000 0.00 0.00 0.00 2.29
2452 3034 3.305403 CGAGAATGCCCTACACGACATAT 60.305 47.826 0.00 0.00 0.00 1.78
2453 3035 3.990469 GAGAATGCCCTACACGACATATG 59.010 47.826 0.00 0.00 0.00 1.78
2454 3036 3.388024 AGAATGCCCTACACGACATATGT 59.612 43.478 8.43 8.43 0.00 2.29
2455 3037 3.838244 ATGCCCTACACGACATATGTT 57.162 42.857 10.30 0.00 0.00 2.71
2456 3038 3.620427 TGCCCTACACGACATATGTTT 57.380 42.857 10.30 0.00 0.00 2.83
2457 3039 3.527533 TGCCCTACACGACATATGTTTC 58.472 45.455 10.30 0.00 0.00 2.78
2458 3040 2.538449 GCCCTACACGACATATGTTTCG 59.462 50.000 10.30 12.27 41.14 3.46
2464 3046 2.343101 ACGACATATGTTTCGTGGTGG 58.657 47.619 18.54 0.00 46.41 4.61
2465 3047 1.062002 CGACATATGTTTCGTGGTGGC 59.938 52.381 10.30 0.00 0.00 5.01
2466 3048 2.080693 GACATATGTTTCGTGGTGGCA 58.919 47.619 10.30 0.00 0.00 4.92
2467 3049 2.682856 GACATATGTTTCGTGGTGGCAT 59.317 45.455 10.30 0.00 0.00 4.40
2468 3050 2.423185 ACATATGTTTCGTGGTGGCATG 59.577 45.455 1.41 0.00 0.00 4.06
2469 3051 0.808125 TATGTTTCGTGGTGGCATGC 59.192 50.000 9.90 9.90 0.00 4.06
2470 3052 1.876497 ATGTTTCGTGGTGGCATGCC 61.876 55.000 30.54 30.54 0.00 4.40
2471 3053 3.361158 TTTCGTGGTGGCATGCCG 61.361 61.111 30.87 18.65 39.42 5.69
2505 3087 4.112341 GCGTACACCCGAGCGACT 62.112 66.667 0.00 0.00 0.00 4.18
2506 3088 2.099831 CGTACACCCGAGCGACTC 59.900 66.667 0.00 0.00 0.00 3.36
2529 3111 4.436998 GGCGGTCCGTGACAGGAG 62.437 72.222 13.94 0.00 41.68 3.69
2530 3112 4.436998 GCGGTCCGTGACAGGAGG 62.437 72.222 13.94 0.00 41.68 4.30
2531 3113 2.675423 CGGTCCGTGACAGGAGGA 60.675 66.667 2.08 0.00 41.68 3.71
2533 3115 2.971452 GTCCGTGACAGGAGGACC 59.029 66.667 11.62 0.00 46.40 4.46
2534 3116 1.906824 GTCCGTGACAGGAGGACCA 60.907 63.158 11.62 0.00 46.40 4.02
2535 3117 1.078528 TCCGTGACAGGAGGACCAT 59.921 57.895 0.00 0.00 38.94 3.55
2536 3118 0.333652 TCCGTGACAGGAGGACCATA 59.666 55.000 0.00 0.00 38.94 2.74
2537 3119 0.747255 CCGTGACAGGAGGACCATAG 59.253 60.000 0.00 0.00 38.94 2.23
2538 3120 0.747255 CGTGACAGGAGGACCATAGG 59.253 60.000 0.00 0.00 38.94 2.57
2539 3121 0.466124 GTGACAGGAGGACCATAGGC 59.534 60.000 0.00 0.00 38.94 3.93
2540 3122 0.042581 TGACAGGAGGACCATAGGCA 59.957 55.000 0.00 0.00 38.94 4.75
2541 3123 0.466124 GACAGGAGGACCATAGGCAC 59.534 60.000 0.00 0.00 38.94 5.01
2542 3124 1.330655 ACAGGAGGACCATAGGCACG 61.331 60.000 0.00 0.00 38.94 5.34
2543 3125 1.043116 CAGGAGGACCATAGGCACGA 61.043 60.000 0.00 0.00 38.94 4.35
2544 3126 0.105453 AGGAGGACCATAGGCACGAT 60.105 55.000 0.00 0.00 38.94 3.73
2545 3127 0.318762 GGAGGACCATAGGCACGATC 59.681 60.000 0.00 0.00 35.97 3.69
2546 3128 0.039074 GAGGACCATAGGCACGATCG 60.039 60.000 14.88 14.88 0.00 3.69
2547 3129 1.006102 GGACCATAGGCACGATCGG 60.006 63.158 20.98 9.59 0.00 4.18
2548 3130 1.006102 GACCATAGGCACGATCGGG 60.006 63.158 20.98 17.95 0.00 5.14
2549 3131 2.343758 CCATAGGCACGATCGGGG 59.656 66.667 20.80 12.08 0.00 5.73
2550 3132 2.357517 CATAGGCACGATCGGGGC 60.358 66.667 34.35 34.35 45.15 5.80
2551 3133 3.626924 ATAGGCACGATCGGGGCC 61.627 66.667 36.82 34.72 46.04 5.80
2556 3138 4.175337 CACGATCGGGGCCACCAT 62.175 66.667 20.98 0.00 40.22 3.55
2557 3139 3.861797 ACGATCGGGGCCACCATC 61.862 66.667 20.98 2.98 40.22 3.51
2558 3140 3.860605 CGATCGGGGCCACCATCA 61.861 66.667 13.43 0.00 40.22 3.07
2559 3141 2.839098 GATCGGGGCCACCATCAT 59.161 61.111 7.85 0.00 40.22 2.45
2560 3142 1.601759 GATCGGGGCCACCATCATG 60.602 63.158 7.85 0.00 40.22 3.07
2561 3143 3.797507 ATCGGGGCCACCATCATGC 62.798 63.158 4.39 0.00 40.22 4.06
2566 3148 3.896133 GCCACCATCATGCCGCAG 61.896 66.667 0.00 0.00 0.00 5.18
2567 3149 2.438975 CCACCATCATGCCGCAGT 60.439 61.111 0.00 0.00 0.00 4.40
2568 3150 2.048023 CCACCATCATGCCGCAGTT 61.048 57.895 0.00 0.00 0.00 3.16
2569 3151 1.597797 CCACCATCATGCCGCAGTTT 61.598 55.000 0.00 0.00 0.00 2.66
2570 3152 0.244450 CACCATCATGCCGCAGTTTT 59.756 50.000 0.00 0.00 0.00 2.43
2571 3153 0.244450 ACCATCATGCCGCAGTTTTG 59.756 50.000 0.00 0.00 0.00 2.44
2572 3154 0.527113 CCATCATGCCGCAGTTTTGA 59.473 50.000 0.00 0.00 0.00 2.69
2573 3155 1.135527 CCATCATGCCGCAGTTTTGAT 59.864 47.619 0.00 0.00 0.00 2.57
2574 3156 2.456989 CATCATGCCGCAGTTTTGATC 58.543 47.619 4.53 0.00 0.00 2.92
2575 3157 0.447406 TCATGCCGCAGTTTTGATCG 59.553 50.000 0.00 0.00 0.00 3.69
2576 3158 1.135699 CATGCCGCAGTTTTGATCGC 61.136 55.000 0.00 0.00 0.00 4.58
2577 3159 2.574212 GCCGCAGTTTTGATCGCG 60.574 61.111 0.00 0.00 46.96 5.87
2578 3160 2.574212 CCGCAGTTTTGATCGCGC 60.574 61.111 0.00 0.00 46.09 6.86
2579 3161 2.574212 CGCAGTTTTGATCGCGCC 60.574 61.111 0.00 0.00 41.38 6.53
2580 3162 2.202479 GCAGTTTTGATCGCGCCC 60.202 61.111 0.00 0.00 0.00 6.13
2581 3163 2.690778 GCAGTTTTGATCGCGCCCT 61.691 57.895 0.00 0.00 0.00 5.19
2582 3164 1.425428 CAGTTTTGATCGCGCCCTC 59.575 57.895 0.00 0.00 0.00 4.30
2583 3165 2.100631 AGTTTTGATCGCGCCCTCG 61.101 57.895 0.00 0.00 39.07 4.63
2584 3166 2.047655 TTTTGATCGCGCCCTCGT 60.048 55.556 0.00 0.00 38.14 4.18
2585 3167 2.387445 TTTTGATCGCGCCCTCGTG 61.387 57.895 0.00 0.00 46.68 4.35
2586 3168 3.583276 TTTGATCGCGCCCTCGTGT 62.583 57.895 0.00 0.00 45.60 4.49
2587 3169 3.583276 TTGATCGCGCCCTCGTGTT 62.583 57.895 0.00 0.00 45.60 3.32
2588 3170 3.554692 GATCGCGCCCTCGTGTTG 61.555 66.667 0.00 0.00 45.60 3.33
2595 3177 4.722700 CCCTCGTGTTGGCCCAGG 62.723 72.222 0.00 0.00 0.00 4.45
2614 3196 3.403558 GGGACAGGGAGGCTGGAC 61.404 72.222 0.00 0.00 0.00 4.02
2615 3197 3.403558 GGACAGGGAGGCTGGACC 61.404 72.222 0.00 0.00 39.61 4.46
2616 3198 3.775654 GACAGGGAGGCTGGACCG 61.776 72.222 0.00 0.00 46.52 4.79
2617 3199 4.640690 ACAGGGAGGCTGGACCGT 62.641 66.667 0.00 0.00 46.52 4.83
2618 3200 4.087892 CAGGGAGGCTGGACCGTG 62.088 72.222 0.00 0.00 46.52 4.94
2619 3201 4.640690 AGGGAGGCTGGACCGTGT 62.641 66.667 0.00 0.00 46.52 4.49
2620 3202 3.637273 GGGAGGCTGGACCGTGTT 61.637 66.667 0.00 0.00 46.52 3.32
2621 3203 2.288025 GGGAGGCTGGACCGTGTTA 61.288 63.158 0.00 0.00 46.52 2.41
2622 3204 1.218316 GGAGGCTGGACCGTGTTAG 59.782 63.158 0.00 0.00 46.52 2.34
2623 3205 1.218316 GAGGCTGGACCGTGTTAGG 59.782 63.158 0.00 0.00 46.52 2.69
2624 3206 2.240162 GAGGCTGGACCGTGTTAGGG 62.240 65.000 0.00 0.00 46.52 3.53
2625 3207 2.436115 GCTGGACCGTGTTAGGGC 60.436 66.667 0.00 0.00 39.05 5.19
2626 3208 3.065306 CTGGACCGTGTTAGGGCA 58.935 61.111 0.00 0.00 42.52 5.36
2627 3209 1.602237 CTGGACCGTGTTAGGGCAT 59.398 57.895 0.00 0.00 42.52 4.40
2628 3210 0.035439 CTGGACCGTGTTAGGGCATT 60.035 55.000 0.00 0.00 42.52 3.56
2629 3211 0.402504 TGGACCGTGTTAGGGCATTT 59.597 50.000 0.00 0.00 42.52 2.32
2630 3212 1.092348 GGACCGTGTTAGGGCATTTC 58.908 55.000 0.00 0.00 42.52 2.17
2631 3213 1.092348 GACCGTGTTAGGGCATTTCC 58.908 55.000 0.00 0.00 39.73 3.13
2640 3222 4.657952 GGCATTTCCCGCCTTAGT 57.342 55.556 0.00 0.00 46.56 2.24
2641 3223 2.106844 GGCATTTCCCGCCTTAGTG 58.893 57.895 0.00 0.00 46.56 2.74
2642 3224 0.679960 GGCATTTCCCGCCTTAGTGT 60.680 55.000 0.00 0.00 46.56 3.55
2643 3225 0.451783 GCATTTCCCGCCTTAGTGTG 59.548 55.000 0.00 0.00 0.00 3.82
2644 3226 1.821216 CATTTCCCGCCTTAGTGTGT 58.179 50.000 0.00 0.00 0.00 3.72
2645 3227 2.159382 CATTTCCCGCCTTAGTGTGTT 58.841 47.619 0.00 0.00 0.00 3.32
2646 3228 2.351706 TTTCCCGCCTTAGTGTGTTT 57.648 45.000 0.00 0.00 0.00 2.83
2647 3229 2.351706 TTCCCGCCTTAGTGTGTTTT 57.648 45.000 0.00 0.00 0.00 2.43
2648 3230 1.600023 TCCCGCCTTAGTGTGTTTTG 58.400 50.000 0.00 0.00 0.00 2.44
2649 3231 0.596082 CCCGCCTTAGTGTGTTTTGG 59.404 55.000 0.00 0.00 0.00 3.28
2650 3232 1.314730 CCGCCTTAGTGTGTTTTGGT 58.685 50.000 0.00 0.00 0.00 3.67
2651 3233 1.001815 CCGCCTTAGTGTGTTTTGGTG 60.002 52.381 0.00 0.00 0.00 4.17
2652 3234 1.944024 CGCCTTAGTGTGTTTTGGTGA 59.056 47.619 0.00 0.00 0.00 4.02
2653 3235 2.552315 CGCCTTAGTGTGTTTTGGTGAT 59.448 45.455 0.00 0.00 0.00 3.06
2654 3236 3.609175 CGCCTTAGTGTGTTTTGGTGATG 60.609 47.826 0.00 0.00 0.00 3.07
2655 3237 3.568007 GCCTTAGTGTGTTTTGGTGATGA 59.432 43.478 0.00 0.00 0.00 2.92
2656 3238 4.218417 GCCTTAGTGTGTTTTGGTGATGAT 59.782 41.667 0.00 0.00 0.00 2.45
2657 3239 5.702865 CCTTAGTGTGTTTTGGTGATGATG 58.297 41.667 0.00 0.00 0.00 3.07
2658 3240 5.473162 CCTTAGTGTGTTTTGGTGATGATGA 59.527 40.000 0.00 0.00 0.00 2.92
2659 3241 4.836125 AGTGTGTTTTGGTGATGATGAC 57.164 40.909 0.00 0.00 0.00 3.06
2660 3242 4.206375 AGTGTGTTTTGGTGATGATGACA 58.794 39.130 0.00 0.00 0.00 3.58
2661 3243 4.644234 AGTGTGTTTTGGTGATGATGACAA 59.356 37.500 0.00 0.00 0.00 3.18
2662 3244 4.739716 GTGTGTTTTGGTGATGATGACAAC 59.260 41.667 0.00 0.00 0.00 3.32
2663 3245 4.644234 TGTGTTTTGGTGATGATGACAACT 59.356 37.500 0.00 0.00 0.00 3.16
2664 3246 5.215160 GTGTTTTGGTGATGATGACAACTC 58.785 41.667 0.00 0.00 0.00 3.01
2665 3247 4.886489 TGTTTTGGTGATGATGACAACTCA 59.114 37.500 0.00 0.00 0.00 3.41
2666 3248 5.215160 GTTTTGGTGATGATGACAACTCAC 58.785 41.667 6.79 6.79 36.12 3.51
2667 3249 3.767902 TGGTGATGATGACAACTCACA 57.232 42.857 13.92 0.00 37.61 3.58
2668 3250 4.290711 TGGTGATGATGACAACTCACAT 57.709 40.909 13.92 0.00 37.61 3.21
2669 3251 4.654915 TGGTGATGATGACAACTCACATT 58.345 39.130 13.92 0.00 37.61 2.71
2670 3252 5.072055 TGGTGATGATGACAACTCACATTT 58.928 37.500 13.92 0.00 37.61 2.32
2671 3253 5.048573 TGGTGATGATGACAACTCACATTTG 60.049 40.000 13.92 0.00 37.61 2.32
2672 3254 4.855388 GTGATGATGACAACTCACATTTGC 59.145 41.667 9.35 0.00 36.57 3.68
2673 3255 3.541071 TGATGACAACTCACATTTGCG 57.459 42.857 0.00 0.00 0.00 4.85
2674 3256 2.226200 TGATGACAACTCACATTTGCGG 59.774 45.455 0.00 0.00 0.00 5.69
2675 3257 1.960417 TGACAACTCACATTTGCGGA 58.040 45.000 0.00 0.00 0.00 5.54
2676 3258 1.601903 TGACAACTCACATTTGCGGAC 59.398 47.619 0.00 0.00 0.00 4.79
2677 3259 1.873591 GACAACTCACATTTGCGGACT 59.126 47.619 0.00 0.00 0.00 3.85
2678 3260 3.064207 GACAACTCACATTTGCGGACTA 58.936 45.455 0.00 0.00 0.00 2.59
2679 3261 3.472652 ACAACTCACATTTGCGGACTAA 58.527 40.909 0.00 0.00 0.00 2.24
2680 3262 4.072131 ACAACTCACATTTGCGGACTAAT 58.928 39.130 0.00 0.00 0.00 1.73
2681 3263 4.154195 ACAACTCACATTTGCGGACTAATC 59.846 41.667 0.00 0.00 0.00 1.75
2682 3264 2.930040 ACTCACATTTGCGGACTAATCG 59.070 45.455 0.00 0.00 0.00 3.34
2683 3265 2.930040 CTCACATTTGCGGACTAATCGT 59.070 45.455 0.00 0.00 0.00 3.73
2684 3266 2.670905 TCACATTTGCGGACTAATCGTG 59.329 45.455 0.00 0.00 0.00 4.35
2685 3267 2.415168 CACATTTGCGGACTAATCGTGT 59.585 45.455 0.00 0.00 0.00 4.49
2686 3268 2.415168 ACATTTGCGGACTAATCGTGTG 59.585 45.455 0.00 0.00 0.00 3.82
2687 3269 0.793861 TTTGCGGACTAATCGTGTGC 59.206 50.000 0.00 0.00 0.00 4.57
2688 3270 1.017177 TTGCGGACTAATCGTGTGCC 61.017 55.000 0.00 0.00 0.00 5.01
2689 3271 1.447140 GCGGACTAATCGTGTGCCA 60.447 57.895 0.00 0.00 0.00 4.92
2690 3272 1.017177 GCGGACTAATCGTGTGCCAA 61.017 55.000 0.00 0.00 0.00 4.52
2691 3273 0.999406 CGGACTAATCGTGTGCCAAG 59.001 55.000 0.00 0.00 0.00 3.61
2692 3274 1.671850 CGGACTAATCGTGTGCCAAGT 60.672 52.381 0.00 0.00 0.00 3.16
2693 3275 2.423577 GGACTAATCGTGTGCCAAGTT 58.576 47.619 0.00 0.00 0.00 2.66
2694 3276 3.592059 GGACTAATCGTGTGCCAAGTTA 58.408 45.455 0.00 0.00 0.00 2.24
2695 3277 3.370061 GGACTAATCGTGTGCCAAGTTAC 59.630 47.826 0.00 0.00 0.00 2.50
2696 3278 4.243270 GACTAATCGTGTGCCAAGTTACT 58.757 43.478 0.00 0.00 0.00 2.24
2697 3279 4.243270 ACTAATCGTGTGCCAAGTTACTC 58.757 43.478 0.00 0.00 0.00 2.59
2698 3280 2.831685 ATCGTGTGCCAAGTTACTCA 57.168 45.000 0.00 0.00 0.00 3.41
2699 3281 2.148916 TCGTGTGCCAAGTTACTCAG 57.851 50.000 0.00 0.00 0.00 3.35
2700 3282 1.148310 CGTGTGCCAAGTTACTCAGG 58.852 55.000 0.19 0.19 0.00 3.86
2701 3283 1.540363 CGTGTGCCAAGTTACTCAGGT 60.540 52.381 5.85 0.00 0.00 4.00
2702 3284 1.873591 GTGTGCCAAGTTACTCAGGTG 59.126 52.381 5.85 0.00 0.00 4.00
2703 3285 0.875059 GTGCCAAGTTACTCAGGTGC 59.125 55.000 5.85 0.00 0.00 5.01
2704 3286 0.472044 TGCCAAGTTACTCAGGTGCA 59.528 50.000 5.85 0.00 0.00 4.57
2705 3287 0.875059 GCCAAGTTACTCAGGTGCAC 59.125 55.000 8.80 8.80 0.00 4.57
2706 3288 1.543429 GCCAAGTTACTCAGGTGCACT 60.543 52.381 17.98 0.00 0.00 4.40
2707 3289 2.851195 CCAAGTTACTCAGGTGCACTT 58.149 47.619 17.98 6.12 33.40 3.16
2708 3290 3.214328 CCAAGTTACTCAGGTGCACTTT 58.786 45.455 17.98 2.37 31.88 2.66
2709 3291 3.003689 CCAAGTTACTCAGGTGCACTTTG 59.996 47.826 17.98 15.32 31.88 2.77
2710 3292 3.560636 AGTTACTCAGGTGCACTTTGT 57.439 42.857 17.98 12.60 0.00 2.83
2711 3293 3.886123 AGTTACTCAGGTGCACTTTGTT 58.114 40.909 17.98 9.63 0.00 2.83
2712 3294 4.270008 AGTTACTCAGGTGCACTTTGTTT 58.730 39.130 17.98 9.32 0.00 2.83
2713 3295 4.096382 AGTTACTCAGGTGCACTTTGTTTG 59.904 41.667 17.98 11.94 0.00 2.93
2714 3296 1.750778 ACTCAGGTGCACTTTGTTTGG 59.249 47.619 17.98 9.90 0.00 3.28
2715 3297 1.750778 CTCAGGTGCACTTTGTTTGGT 59.249 47.619 17.98 0.00 0.00 3.67
2716 3298 1.476085 TCAGGTGCACTTTGTTTGGTG 59.524 47.619 17.98 0.00 36.62 4.17
2723 3305 2.184448 CACTTTGTTTGGTGCAAGACG 58.816 47.619 0.00 0.00 0.00 4.18
2724 3306 1.134175 ACTTTGTTTGGTGCAAGACGG 59.866 47.619 0.00 0.00 0.00 4.79
2725 3307 1.134175 CTTTGTTTGGTGCAAGACGGT 59.866 47.619 0.00 0.00 0.00 4.83
2726 3308 1.178276 TTGTTTGGTGCAAGACGGTT 58.822 45.000 0.00 0.00 0.00 4.44
2727 3309 0.736053 TGTTTGGTGCAAGACGGTTC 59.264 50.000 0.00 0.00 0.00 3.62
2728 3310 0.316689 GTTTGGTGCAAGACGGTTCG 60.317 55.000 0.00 0.00 0.00 3.95
2729 3311 1.440938 TTTGGTGCAAGACGGTTCGG 61.441 55.000 0.00 0.00 0.00 4.30
2730 3312 3.723348 GGTGCAAGACGGTTCGGC 61.723 66.667 0.00 0.00 33.59 5.54
2731 3313 2.970324 GTGCAAGACGGTTCGGCA 60.970 61.111 0.00 0.00 37.34 5.69
2732 3314 2.031919 TGCAAGACGGTTCGGCAT 59.968 55.556 0.00 0.00 37.34 4.40
2733 3315 1.599518 TGCAAGACGGTTCGGCATT 60.600 52.632 0.00 0.00 37.34 3.56
2734 3316 1.134694 GCAAGACGGTTCGGCATTC 59.865 57.895 0.00 0.00 37.34 2.67
2735 3317 1.794222 CAAGACGGTTCGGCATTCC 59.206 57.895 0.00 0.00 37.34 3.01
2736 3318 1.376812 AAGACGGTTCGGCATTCCC 60.377 57.895 0.00 0.00 37.34 3.97
2737 3319 1.838073 AAGACGGTTCGGCATTCCCT 61.838 55.000 0.00 0.00 37.34 4.20
2738 3320 1.814169 GACGGTTCGGCATTCCCTC 60.814 63.158 0.00 0.00 33.63 4.30
2739 3321 2.513897 CGGTTCGGCATTCCCTCC 60.514 66.667 0.00 0.00 0.00 4.30
2740 3322 2.674754 GGTTCGGCATTCCCTCCA 59.325 61.111 0.00 0.00 0.00 3.86
2741 3323 1.452108 GGTTCGGCATTCCCTCCAG 60.452 63.158 0.00 0.00 0.00 3.86
2742 3324 1.602237 GTTCGGCATTCCCTCCAGA 59.398 57.895 0.00 0.00 0.00 3.86
2743 3325 0.744771 GTTCGGCATTCCCTCCAGAC 60.745 60.000 0.00 0.00 0.00 3.51
2744 3326 2.202932 CGGCATTCCCTCCAGACG 60.203 66.667 0.00 0.00 0.00 4.18
2745 3327 2.721167 CGGCATTCCCTCCAGACGA 61.721 63.158 0.00 0.00 0.00 4.20
2746 3328 1.602237 GGCATTCCCTCCAGACGAA 59.398 57.895 0.00 0.00 0.00 3.85
2747 3329 0.035439 GGCATTCCCTCCAGACGAAA 60.035 55.000 0.00 0.00 0.00 3.46
2748 3330 1.613255 GGCATTCCCTCCAGACGAAAA 60.613 52.381 0.00 0.00 0.00 2.29
2749 3331 2.159382 GCATTCCCTCCAGACGAAAAA 58.841 47.619 0.00 0.00 0.00 1.94
2750 3332 2.162408 GCATTCCCTCCAGACGAAAAAG 59.838 50.000 0.00 0.00 0.00 2.27
2751 3333 3.674997 CATTCCCTCCAGACGAAAAAGA 58.325 45.455 0.00 0.00 0.00 2.52
2752 3334 4.265073 CATTCCCTCCAGACGAAAAAGAT 58.735 43.478 0.00 0.00 0.00 2.40
2753 3335 3.611766 TCCCTCCAGACGAAAAAGATC 57.388 47.619 0.00 0.00 0.00 2.75
2755 3337 2.094182 CCCTCCAGACGAAAAAGATCGA 60.094 50.000 3.47 0.00 45.48 3.59
2756 3338 3.585862 CCTCCAGACGAAAAAGATCGAA 58.414 45.455 3.47 0.00 45.48 3.71
2757 3339 3.614616 CCTCCAGACGAAAAAGATCGAAG 59.385 47.826 3.47 0.00 45.48 3.79
2758 3340 4.486090 CTCCAGACGAAAAAGATCGAAGA 58.514 43.478 3.47 0.00 45.48 2.87
2759 3341 4.235360 TCCAGACGAAAAAGATCGAAGAC 58.765 43.478 3.47 0.00 45.48 3.01
2760 3342 3.059570 CCAGACGAAAAAGATCGAAGACG 59.940 47.826 3.47 0.00 45.48 4.18
2761 3343 3.059570 CAGACGAAAAAGATCGAAGACGG 59.940 47.826 3.47 0.00 45.48 4.79
2762 3344 2.985139 GACGAAAAAGATCGAAGACGGT 59.015 45.455 3.47 0.00 45.48 4.83
2763 3345 2.729882 ACGAAAAAGATCGAAGACGGTG 59.270 45.455 3.47 0.00 45.48 4.94
2764 3346 2.729882 CGAAAAAGATCGAAGACGGTGT 59.270 45.455 0.00 0.00 45.48 4.16
2765 3347 3.183775 CGAAAAAGATCGAAGACGGTGTT 59.816 43.478 0.00 0.00 45.48 3.32
2766 3348 4.318546 CGAAAAAGATCGAAGACGGTGTTT 60.319 41.667 0.00 0.00 45.43 2.83
2768 3350 4.727235 AAAGATCGAAGACGGTGTTTTC 57.273 40.909 0.00 0.00 41.95 2.29
2769 3351 2.325761 AGATCGAAGACGGTGTTTTCG 58.674 47.619 14.22 14.22 46.54 3.46
2771 3353 1.480205 TCGAAGACGGTGTTTTCGAC 58.520 50.000 17.73 0.00 46.61 4.20
2772 3354 2.182302 TCGAAGACGGTGTTTTCGACG 61.182 52.381 17.73 4.35 46.61 5.12
2773 3355 1.203065 GAAGACGGTGTTTTCGACGT 58.797 50.000 0.00 0.00 42.88 4.34
2774 3356 0.925466 AAGACGGTGTTTTCGACGTG 59.075 50.000 0.00 0.00 39.95 4.49
2775 3357 0.179129 AGACGGTGTTTTCGACGTGT 60.179 50.000 0.00 0.00 39.95 4.49
2776 3358 0.646895 GACGGTGTTTTCGACGTGTT 59.353 50.000 0.00 0.00 39.95 3.32
2777 3359 1.060986 GACGGTGTTTTCGACGTGTTT 59.939 47.619 0.00 0.00 39.95 2.83
2778 3360 1.464219 ACGGTGTTTTCGACGTGTTTT 59.536 42.857 0.00 0.00 38.24 2.43
2779 3361 2.670414 ACGGTGTTTTCGACGTGTTTTA 59.330 40.909 0.00 0.00 38.24 1.52
2780 3362 3.309410 ACGGTGTTTTCGACGTGTTTTAT 59.691 39.130 0.00 0.00 38.24 1.40
2781 3363 4.201802 ACGGTGTTTTCGACGTGTTTTATT 60.202 37.500 0.00 0.00 38.24 1.40
2782 3364 4.729564 CGGTGTTTTCGACGTGTTTTATTT 59.270 37.500 0.00 0.00 0.00 1.40
2783 3365 5.109039 CGGTGTTTTCGACGTGTTTTATTTC 60.109 40.000 0.00 0.00 0.00 2.17
2784 3366 5.967088 GGTGTTTTCGACGTGTTTTATTTCT 59.033 36.000 0.00 0.00 0.00 2.52
2785 3367 6.469915 GGTGTTTTCGACGTGTTTTATTTCTT 59.530 34.615 0.00 0.00 0.00 2.52
2786 3368 7.008538 GGTGTTTTCGACGTGTTTTATTTCTTT 59.991 33.333 0.00 0.00 0.00 2.52
2787 3369 7.832697 GTGTTTTCGACGTGTTTTATTTCTTTG 59.167 33.333 0.00 0.00 0.00 2.77
2788 3370 7.008447 TGTTTTCGACGTGTTTTATTTCTTTGG 59.992 33.333 0.00 0.00 0.00 3.28
2789 3371 5.738118 TCGACGTGTTTTATTTCTTTGGT 57.262 34.783 0.00 0.00 0.00 3.67
2790 3372 5.740406 TCGACGTGTTTTATTTCTTTGGTC 58.260 37.500 0.00 0.00 0.00 4.02
2791 3373 4.605594 CGACGTGTTTTATTTCTTTGGTCG 59.394 41.667 0.00 0.00 37.75 4.79
2792 3374 5.488645 ACGTGTTTTATTTCTTTGGTCGT 57.511 34.783 0.00 0.00 0.00 4.34
2793 3375 6.561902 CGACGTGTTTTATTTCTTTGGTCGTA 60.562 38.462 0.00 0.00 38.81 3.43
2794 3376 6.652245 ACGTGTTTTATTTCTTTGGTCGTAG 58.348 36.000 0.00 0.00 0.00 3.51
2795 3377 6.075280 CGTGTTTTATTTCTTTGGTCGTAGG 58.925 40.000 0.00 0.00 0.00 3.18
2796 3378 6.073657 CGTGTTTTATTTCTTTGGTCGTAGGA 60.074 38.462 0.00 0.00 0.00 2.94
2797 3379 7.518689 CGTGTTTTATTTCTTTGGTCGTAGGAA 60.519 37.037 0.00 0.00 0.00 3.36
2798 3380 8.130469 GTGTTTTATTTCTTTGGTCGTAGGAAA 58.870 33.333 0.00 0.00 0.00 3.13
2799 3381 8.130469 TGTTTTATTTCTTTGGTCGTAGGAAAC 58.870 33.333 0.00 0.00 0.00 2.78
2800 3382 6.806388 TTATTTCTTTGGTCGTAGGAAACC 57.194 37.500 0.00 0.00 36.03 3.27
2801 3383 2.845363 TCTTTGGTCGTAGGAAACCC 57.155 50.000 0.00 0.00 34.47 4.11
2802 3384 1.001181 TCTTTGGTCGTAGGAAACCCG 59.999 52.381 0.00 0.00 34.47 5.28
2803 3385 0.758123 TTTGGTCGTAGGAAACCCGT 59.242 50.000 0.00 0.00 34.47 5.28
2804 3386 1.626686 TTGGTCGTAGGAAACCCGTA 58.373 50.000 0.00 0.00 34.47 4.02
2805 3387 0.887933 TGGTCGTAGGAAACCCGTAC 59.112 55.000 0.00 0.00 34.47 3.67
2806 3388 1.177401 GGTCGTAGGAAACCCGTACT 58.823 55.000 0.00 0.00 34.80 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.256110 CATGTACTTGAACATCAGCCAGA 58.744 43.478 2.62 0.00 38.01 3.86
2 3 3.008923 TCCATGTACTTGAACATCAGCCA 59.991 43.478 10.20 0.00 38.01 4.75
74 75 8.115490 AGGTGATCTTCAGAATTTTTACCTTG 57.885 34.615 0.00 0.00 31.18 3.61
76 77 9.981460 ATAAGGTGATCTTCAGAATTTTTACCT 57.019 29.630 0.00 0.00 36.93 3.08
126 128 4.342772 GTTCACGTGGCATTGATTGATAC 58.657 43.478 17.00 0.00 0.00 2.24
374 887 5.740290 TCTTTCAAAGACGAAGGGAGTAT 57.260 39.130 0.00 0.00 31.20 2.12
375 888 5.303589 TCTTCTTTCAAAGACGAAGGGAGTA 59.696 40.000 3.88 0.00 37.23 2.59
376 889 4.101119 TCTTCTTTCAAAGACGAAGGGAGT 59.899 41.667 3.88 0.00 37.23 3.85
377 890 4.632153 TCTTCTTTCAAAGACGAAGGGAG 58.368 43.478 3.88 0.00 37.23 4.30
378 891 4.682778 TCTTCTTTCAAAGACGAAGGGA 57.317 40.909 3.88 0.00 37.23 4.20
379 892 5.527582 TCTTTCTTCTTTCAAAGACGAAGGG 59.472 40.000 21.28 16.22 43.71 3.95
380 893 6.258947 ACTCTTTCTTCTTTCAAAGACGAAGG 59.741 38.462 17.66 17.66 43.71 3.46
381 894 7.122550 CACTCTTTCTTCTTTCAAAGACGAAG 58.877 38.462 16.23 12.30 43.71 3.79
382 895 6.594159 ACACTCTTTCTTCTTTCAAAGACGAA 59.406 34.615 13.63 13.63 42.03 3.85
383 896 6.106673 ACACTCTTTCTTCTTTCAAAGACGA 58.893 36.000 0.00 0.00 37.23 4.20
384 897 6.351327 ACACTCTTTCTTCTTTCAAAGACG 57.649 37.500 0.00 0.00 37.23 4.18
385 898 8.426881 AGTACACTCTTTCTTCTTTCAAAGAC 57.573 34.615 0.00 0.00 37.23 3.01
386 899 9.449719 AAAGTACACTCTTTCTTCTTTCAAAGA 57.550 29.630 0.00 0.00 36.49 2.52
387 900 9.495754 CAAAGTACACTCTTTCTTCTTTCAAAG 57.504 33.333 0.00 0.00 35.77 2.77
388 901 9.226606 TCAAAGTACACTCTTTCTTCTTTCAAA 57.773 29.630 0.00 0.00 35.77 2.69
389 902 8.786826 TCAAAGTACACTCTTTCTTCTTTCAA 57.213 30.769 0.00 0.00 35.77 2.69
390 903 8.665685 GTTCAAAGTACACTCTTTCTTCTTTCA 58.334 33.333 0.00 0.00 35.77 2.69
391 904 8.884726 AGTTCAAAGTACACTCTTTCTTCTTTC 58.115 33.333 0.00 0.00 35.77 2.62
392 905 8.794335 AGTTCAAAGTACACTCTTTCTTCTTT 57.206 30.769 0.00 0.00 35.77 2.52
393 906 8.794335 AAGTTCAAAGTACACTCTTTCTTCTT 57.206 30.769 0.00 0.00 35.77 2.52
394 907 8.794335 AAAGTTCAAAGTACACTCTTTCTTCT 57.206 30.769 0.00 0.00 35.77 2.85
477 990 9.791801 TCTAATGCTACTAATTTGATGGCATAA 57.208 29.630 0.00 0.00 37.85 1.90
478 991 9.964354 ATCTAATGCTACTAATTTGATGGCATA 57.036 29.630 0.00 0.00 37.85 3.14
479 992 8.874744 ATCTAATGCTACTAATTTGATGGCAT 57.125 30.769 0.00 0.00 40.04 4.40
480 993 8.696043 AATCTAATGCTACTAATTTGATGGCA 57.304 30.769 0.00 0.00 32.33 4.92
481 994 8.786898 TGAATCTAATGCTACTAATTTGATGGC 58.213 33.333 0.00 0.00 32.33 4.40
533 1046 5.782047 TCAATGCTTGTGAAACCAAATAGG 58.218 37.500 0.00 0.00 45.67 2.57
537 1050 9.941325 AAATATATCAATGCTTGTGAAACCAAA 57.059 25.926 0.00 0.00 34.36 3.28
538 1051 9.941325 AAAATATATCAATGCTTGTGAAACCAA 57.059 25.926 0.00 0.00 34.36 3.67
539 1052 9.941325 AAAAATATATCAATGCTTGTGAAACCA 57.059 25.926 0.00 0.00 34.36 3.67
541 1054 9.693157 GCAAAAATATATCAATGCTTGTGAAAC 57.307 29.630 8.52 0.00 37.35 2.78
542 1055 9.433153 TGCAAAAATATATCAATGCTTGTGAAA 57.567 25.926 14.10 0.00 34.97 2.69
543 1056 8.871862 GTGCAAAAATATATCAATGCTTGTGAA 58.128 29.630 14.10 0.00 34.97 3.18
544 1057 8.033626 TGTGCAAAAATATATCAATGCTTGTGA 58.966 29.630 14.10 0.00 34.97 3.58
545 1058 8.187354 TGTGCAAAAATATATCAATGCTTGTG 57.813 30.769 14.10 0.24 34.97 3.33
546 1059 8.774890 TTGTGCAAAAATATATCAATGCTTGT 57.225 26.923 14.10 0.00 34.97 3.16
547 1060 9.480538 GTTTGTGCAAAAATATATCAATGCTTG 57.519 29.630 5.11 0.00 34.97 4.01
548 1061 9.439500 AGTTTGTGCAAAAATATATCAATGCTT 57.561 25.926 5.11 0.00 34.97 3.91
549 1062 9.090692 GAGTTTGTGCAAAAATATATCAATGCT 57.909 29.630 5.11 0.00 34.97 3.79
550 1063 8.051909 CGAGTTTGTGCAAAAATATATCAATGC 58.948 33.333 5.11 8.75 31.33 3.56
551 1064 9.288124 TCGAGTTTGTGCAAAAATATATCAATG 57.712 29.630 5.11 0.00 31.33 2.82
553 1066 9.502145 GATCGAGTTTGTGCAAAAATATATCAA 57.498 29.630 5.11 0.00 31.33 2.57
554 1067 8.672815 TGATCGAGTTTGTGCAAAAATATATCA 58.327 29.630 5.11 9.71 31.33 2.15
555 1068 9.502145 TTGATCGAGTTTGTGCAAAAATATATC 57.498 29.630 5.11 7.47 31.33 1.63
556 1069 9.853555 TTTGATCGAGTTTGTGCAAAAATATAT 57.146 25.926 5.11 0.00 31.33 0.86
557 1070 9.123709 GTTTGATCGAGTTTGTGCAAAAATATA 57.876 29.630 5.11 0.00 31.33 0.86
558 1071 7.867403 AGTTTGATCGAGTTTGTGCAAAAATAT 59.133 29.630 5.11 0.00 31.33 1.28
559 1072 7.199766 AGTTTGATCGAGTTTGTGCAAAAATA 58.800 30.769 5.11 0.00 31.33 1.40
560 1073 6.042143 AGTTTGATCGAGTTTGTGCAAAAAT 58.958 32.000 5.11 0.00 31.33 1.82
561 1074 5.406649 AGTTTGATCGAGTTTGTGCAAAAA 58.593 33.333 0.00 0.00 31.33 1.94
562 1075 4.992688 AGTTTGATCGAGTTTGTGCAAAA 58.007 34.783 0.00 0.00 31.33 2.44
563 1076 4.630894 AGTTTGATCGAGTTTGTGCAAA 57.369 36.364 0.00 0.00 0.00 3.68
564 1077 4.630894 AAGTTTGATCGAGTTTGTGCAA 57.369 36.364 0.00 0.00 0.00 4.08
565 1078 4.095632 TCAAAGTTTGATCGAGTTTGTGCA 59.904 37.500 14.35 0.00 38.17 4.57
566 1079 4.597079 TCAAAGTTTGATCGAGTTTGTGC 58.403 39.130 14.35 0.00 38.17 4.57
567 1080 6.048073 TCTCAAAGTTTGATCGAGTTTGTG 57.952 37.500 18.35 18.43 39.30 3.33
568 1081 6.867662 ATCTCAAAGTTTGATCGAGTTTGT 57.132 33.333 18.35 0.00 39.30 2.83
569 1082 8.023050 ACTATCTCAAAGTTTGATCGAGTTTG 57.977 34.615 18.35 17.00 39.30 2.93
570 1083 8.608844 AACTATCTCAAAGTTTGATCGAGTTT 57.391 30.769 18.35 5.88 39.30 2.66
571 1084 8.608844 AAACTATCTCAAAGTTTGATCGAGTT 57.391 30.769 18.35 20.46 43.66 3.01
580 1093 8.924511 TGAAGGATCAAACTATCTCAAAGTTT 57.075 30.769 0.00 0.00 45.64 2.66
581 1094 8.787852 GTTGAAGGATCAAACTATCTCAAAGTT 58.212 33.333 0.00 0.00 46.66 2.66
582 1095 7.939039 TGTTGAAGGATCAAACTATCTCAAAGT 59.061 33.333 0.00 0.00 46.66 2.66
583 1096 8.327941 TGTTGAAGGATCAAACTATCTCAAAG 57.672 34.615 0.00 0.00 46.66 2.77
584 1097 8.690203 TTGTTGAAGGATCAAACTATCTCAAA 57.310 30.769 0.00 0.00 46.66 2.69
585 1098 8.690203 TTTGTTGAAGGATCAAACTATCTCAA 57.310 30.769 0.00 0.00 46.66 3.02
586 1099 8.690203 TTTTGTTGAAGGATCAAACTATCTCA 57.310 30.769 0.00 0.00 46.66 3.27
588 1101 9.918630 CAATTTTGTTGAAGGATCAAACTATCT 57.081 29.630 0.00 0.00 46.66 1.98
589 1102 9.912634 TCAATTTTGTTGAAGGATCAAACTATC 57.087 29.630 0.00 0.00 46.66 2.08
592 1105 9.447157 TTTTCAATTTTGTTGAAGGATCAAACT 57.553 25.926 0.00 0.00 46.66 2.66
612 1125 9.947433 TCCGTCCTTTAAAGAGTATATTTTCAA 57.053 29.630 16.98 0.00 0.00 2.69
613 1126 9.595823 CTCCGTCCTTTAAAGAGTATATTTTCA 57.404 33.333 16.98 0.00 0.00 2.69
614 1127 9.043079 CCTCCGTCCTTTAAAGAGTATATTTTC 57.957 37.037 16.98 0.00 0.00 2.29
615 1128 7.991460 CCCTCCGTCCTTTAAAGAGTATATTTT 59.009 37.037 16.98 0.00 0.00 1.82
616 1129 7.346436 TCCCTCCGTCCTTTAAAGAGTATATTT 59.654 37.037 16.98 0.00 0.00 1.40
617 1130 6.842807 TCCCTCCGTCCTTTAAAGAGTATATT 59.157 38.462 16.98 0.00 0.00 1.28
618 1131 6.379579 TCCCTCCGTCCTTTAAAGAGTATAT 58.620 40.000 16.98 0.00 0.00 0.86
619 1132 5.769835 TCCCTCCGTCCTTTAAAGAGTATA 58.230 41.667 16.98 0.00 0.00 1.47
620 1133 4.617593 TCCCTCCGTCCTTTAAAGAGTAT 58.382 43.478 16.98 0.00 0.00 2.12
621 1134 4.021916 CTCCCTCCGTCCTTTAAAGAGTA 58.978 47.826 16.98 0.00 0.00 2.59
622 1135 2.832733 CTCCCTCCGTCCTTTAAAGAGT 59.167 50.000 16.98 0.00 0.00 3.24
623 1136 2.832733 ACTCCCTCCGTCCTTTAAAGAG 59.167 50.000 16.98 7.03 0.00 2.85
624 1137 2.898662 ACTCCCTCCGTCCTTTAAAGA 58.101 47.619 16.98 0.24 0.00 2.52
625 1138 3.132467 CCTACTCCCTCCGTCCTTTAAAG 59.868 52.174 8.32 8.32 0.00 1.85
626 1139 3.102204 CCTACTCCCTCCGTCCTTTAAA 58.898 50.000 0.00 0.00 0.00 1.52
627 1140 2.043526 ACCTACTCCCTCCGTCCTTTAA 59.956 50.000 0.00 0.00 0.00 1.52
628 1141 1.642762 ACCTACTCCCTCCGTCCTTTA 59.357 52.381 0.00 0.00 0.00 1.85
629 1142 0.412640 ACCTACTCCCTCCGTCCTTT 59.587 55.000 0.00 0.00 0.00 3.11
630 1143 0.412640 AACCTACTCCCTCCGTCCTT 59.587 55.000 0.00 0.00 0.00 3.36
631 1144 1.064091 GTAACCTACTCCCTCCGTCCT 60.064 57.143 0.00 0.00 0.00 3.85
632 1145 1.397672 GTAACCTACTCCCTCCGTCC 58.602 60.000 0.00 0.00 0.00 4.79
633 1146 1.397672 GGTAACCTACTCCCTCCGTC 58.602 60.000 0.00 0.00 0.00 4.79
634 1147 0.394899 CGGTAACCTACTCCCTCCGT 60.395 60.000 0.00 0.00 33.20 4.69
635 1148 0.107017 TCGGTAACCTACTCCCTCCG 60.107 60.000 0.00 0.00 38.16 4.63
636 1149 1.962100 CATCGGTAACCTACTCCCTCC 59.038 57.143 0.00 0.00 0.00 4.30
637 1150 1.962100 CCATCGGTAACCTACTCCCTC 59.038 57.143 0.00 0.00 0.00 4.30
638 1151 2.033208 GCCATCGGTAACCTACTCCCT 61.033 57.143 0.00 0.00 0.00 4.20
639 1152 0.391966 GCCATCGGTAACCTACTCCC 59.608 60.000 0.00 0.00 0.00 4.30
640 1153 1.117150 TGCCATCGGTAACCTACTCC 58.883 55.000 0.00 0.00 0.00 3.85
641 1154 2.973694 TTGCCATCGGTAACCTACTC 57.026 50.000 0.00 0.00 0.00 2.59
642 1155 3.433173 GGAATTGCCATCGGTAACCTACT 60.433 47.826 0.00 0.00 36.34 2.57
643 1156 2.876550 GGAATTGCCATCGGTAACCTAC 59.123 50.000 0.00 0.00 36.34 3.18
653 1166 2.726821 TGGTCAGAAGGAATTGCCATC 58.273 47.619 0.00 0.00 40.02 3.51
661 1174 4.574674 ACAGCAATATGGTCAGAAGGAA 57.425 40.909 0.00 0.00 0.00 3.36
679 1192 9.462606 AATGTCCCCTTAATTCTACTTAAACAG 57.537 33.333 0.00 0.00 0.00 3.16
689 1202 5.602561 GCCCATTTAATGTCCCCTTAATTCT 59.397 40.000 4.15 0.00 0.00 2.40
699 1212 3.769300 ACTCCTTTGCCCATTTAATGTCC 59.231 43.478 4.15 0.00 0.00 4.02
711 1224 3.573967 TCCATTTCTTCAACTCCTTTGCC 59.426 43.478 0.00 0.00 34.88 4.52
715 1228 5.200483 TGTTGTCCATTTCTTCAACTCCTT 58.800 37.500 0.00 0.00 40.20 3.36
720 1233 4.261614 GGTCCTGTTGTCCATTTCTTCAAC 60.262 45.833 0.00 0.00 40.03 3.18
737 1250 1.774894 TTTCTTGTCCCCGGGTCCTG 61.775 60.000 21.85 3.45 0.00 3.86
739 1252 0.892358 GTTTTCTTGTCCCCGGGTCC 60.892 60.000 21.85 9.95 0.00 4.46
740 1253 0.179012 TGTTTTCTTGTCCCCGGGTC 60.179 55.000 21.85 12.95 0.00 4.46
741 1254 0.259356 TTGTTTTCTTGTCCCCGGGT 59.741 50.000 21.85 0.00 0.00 5.28
742 1255 0.958822 CTTGTTTTCTTGTCCCCGGG 59.041 55.000 15.80 15.80 0.00 5.73
743 1256 1.880027 CTCTTGTTTTCTTGTCCCCGG 59.120 52.381 0.00 0.00 0.00 5.73
744 1257 2.846193 TCTCTTGTTTTCTTGTCCCCG 58.154 47.619 0.00 0.00 0.00 5.73
745 1258 4.398319 TGATCTCTTGTTTTCTTGTCCCC 58.602 43.478 0.00 0.00 0.00 4.81
746 1259 5.563671 GCTTGATCTCTTGTTTTCTTGTCCC 60.564 44.000 0.00 0.00 0.00 4.46
747 1260 5.009010 TGCTTGATCTCTTGTTTTCTTGTCC 59.991 40.000 0.00 0.00 0.00 4.02
748 1261 6.064846 TGCTTGATCTCTTGTTTTCTTGTC 57.935 37.500 0.00 0.00 0.00 3.18
749 1262 6.268566 GTTGCTTGATCTCTTGTTTTCTTGT 58.731 36.000 0.00 0.00 0.00 3.16
750 1263 5.689068 GGTTGCTTGATCTCTTGTTTTCTTG 59.311 40.000 0.00 0.00 0.00 3.02
751 1264 5.506317 CGGTTGCTTGATCTCTTGTTTTCTT 60.506 40.000 0.00 0.00 0.00 2.52
752 1265 4.023707 CGGTTGCTTGATCTCTTGTTTTCT 60.024 41.667 0.00 0.00 0.00 2.52
753 1266 4.222114 CGGTTGCTTGATCTCTTGTTTTC 58.778 43.478 0.00 0.00 0.00 2.29
754 1267 3.550842 GCGGTTGCTTGATCTCTTGTTTT 60.551 43.478 0.00 0.00 38.39 2.43
761 1274 0.955428 TGTGGCGGTTGCTTGATCTC 60.955 55.000 0.00 0.00 42.25 2.75
765 1278 1.034838 AAACTGTGGCGGTTGCTTGA 61.035 50.000 0.00 0.00 42.25 3.02
781 1294 5.574891 ACCATTTTTCCTTTTTGGCAAAC 57.425 34.783 13.10 0.00 30.93 2.93
810 1328 8.155821 TCAGGTTAAAACATCGTGATTTTGTA 57.844 30.769 0.00 0.00 30.80 2.41
821 1346 6.633856 AGATTGCCATTCAGGTTAAAACATC 58.366 36.000 0.00 0.00 40.61 3.06
823 1348 5.774690 AGAGATTGCCATTCAGGTTAAAACA 59.225 36.000 0.00 0.00 40.61 2.83
899 1424 0.530744 TGTCGAGTGTGATAGGGTGC 59.469 55.000 0.00 0.00 0.00 5.01
1091 1624 3.499737 CAACGGGCGCCTTAGCTG 61.500 66.667 28.56 15.41 36.60 4.24
1092 1625 4.778143 CCAACGGGCGCCTTAGCT 62.778 66.667 28.56 6.80 36.60 3.32
1716 2261 1.516386 CGCCGCGCTCTTCTTAGAA 60.516 57.895 5.56 0.00 0.00 2.10
1867 2418 0.304705 GACACAAAGGACACACGCAG 59.695 55.000 0.00 0.00 0.00 5.18
1972 2523 7.649306 ACTCAAATTCAAACTGCTTTATCACAC 59.351 33.333 0.00 0.00 0.00 3.82
1993 2544 9.457436 GGTTTCCAATATTTAGGTCTAACTCAA 57.543 33.333 0.00 0.00 0.00 3.02
1995 2546 7.983484 TCGGTTTCCAATATTTAGGTCTAACTC 59.017 37.037 0.00 0.00 0.00 3.01
2041 2592 5.071788 ACAGTCCAAAAGTTACTGAGATCCA 59.928 40.000 9.90 0.00 42.59 3.41
2044 2595 6.831976 AGAACAGTCCAAAAGTTACTGAGAT 58.168 36.000 9.90 0.00 42.59 2.75
2105 2658 4.514441 CAGCATGATCTATCCAAACACTCC 59.486 45.833 0.00 0.00 39.69 3.85
2126 2680 0.107703 TGGCCGGCTTCATAGAACAG 60.108 55.000 28.56 0.00 0.00 3.16
2201 2768 2.542907 CGTGCACTTTTCCCACGCT 61.543 57.895 16.19 0.00 44.45 5.07
2280 2850 8.531530 GTCAAAGTGTGTTTTTGATATTGTCAC 58.468 33.333 4.02 0.00 43.90 3.67
2291 2861 4.712337 TGGGTATGGTCAAAGTGTGTTTTT 59.288 37.500 0.00 0.00 0.00 1.94
2318 2888 6.316890 GGTAGACAAGGGCGAATTGTTTTATA 59.683 38.462 3.39 0.00 40.86 0.98
2346 2916 8.907222 AATCAAAACTCTTGTAATGGCAAATT 57.093 26.923 0.00 0.00 0.00 1.82
2349 2919 7.041030 TCGTAATCAAAACTCTTGTAATGGCAA 60.041 33.333 0.00 0.00 0.00 4.52
2350 2920 6.428465 TCGTAATCAAAACTCTTGTAATGGCA 59.572 34.615 0.00 0.00 0.00 4.92
2357 2927 9.490379 AGTAATTCTCGTAATCAAAACTCTTGT 57.510 29.630 0.00 0.00 0.00 3.16
2381 2963 6.042208 GGTACTCCAGCATCCTTTATAAGAGT 59.958 42.308 0.00 0.00 36.18 3.24
2399 2981 0.682209 TCACACTAGGCGGGTACTCC 60.682 60.000 0.00 0.00 0.00 3.85
2402 2984 0.455005 GACTCACACTAGGCGGGTAC 59.545 60.000 0.00 0.00 0.00 3.34
2412 2994 2.651361 CCCGCGAAGACTCACACT 59.349 61.111 8.23 0.00 0.00 3.55
2413 2995 3.112709 GCCCGCGAAGACTCACAC 61.113 66.667 8.23 0.00 0.00 3.82
2414 2996 4.717629 CGCCCGCGAAGACTCACA 62.718 66.667 8.23 0.00 42.83 3.58
2415 2997 4.415332 TCGCCCGCGAAGACTCAC 62.415 66.667 8.23 0.00 46.01 3.51
2429 3011 1.141019 TCGTGTAGGGCATTCTCGC 59.859 57.895 0.00 0.00 0.00 5.03
2430 3012 0.172578 TGTCGTGTAGGGCATTCTCG 59.827 55.000 0.00 0.00 0.00 4.04
2431 3013 2.604046 ATGTCGTGTAGGGCATTCTC 57.396 50.000 0.00 0.00 0.00 2.87
2432 3014 3.388024 ACATATGTCGTGTAGGGCATTCT 59.612 43.478 1.41 0.00 0.00 2.40
2433 3015 3.728845 ACATATGTCGTGTAGGGCATTC 58.271 45.455 1.41 0.00 0.00 2.67
2434 3016 3.838244 ACATATGTCGTGTAGGGCATT 57.162 42.857 1.41 0.00 0.00 3.56
2435 3017 3.838244 AACATATGTCGTGTAGGGCAT 57.162 42.857 9.23 0.00 0.00 4.40
2436 3018 3.527533 GAAACATATGTCGTGTAGGGCA 58.472 45.455 9.23 0.00 0.00 5.36
2437 3019 2.538449 CGAAACATATGTCGTGTAGGGC 59.462 50.000 9.23 0.00 32.61 5.19
2445 3027 1.062002 GCCACCACGAAACATATGTCG 59.938 52.381 9.23 11.87 42.91 4.35
2446 3028 2.080693 TGCCACCACGAAACATATGTC 58.919 47.619 9.23 0.00 0.00 3.06
2447 3029 2.192664 TGCCACCACGAAACATATGT 57.807 45.000 1.41 1.41 0.00 2.29
2448 3030 2.795681 GCATGCCACCACGAAACATATG 60.796 50.000 6.36 0.00 0.00 1.78
2449 3031 1.405105 GCATGCCACCACGAAACATAT 59.595 47.619 6.36 0.00 0.00 1.78
2450 3032 0.808125 GCATGCCACCACGAAACATA 59.192 50.000 6.36 0.00 0.00 2.29
2451 3033 1.586028 GCATGCCACCACGAAACAT 59.414 52.632 6.36 0.00 0.00 2.71
2452 3034 2.560119 GGCATGCCACCACGAAACA 61.560 57.895 32.08 0.00 35.81 2.83
2453 3035 2.258286 GGCATGCCACCACGAAAC 59.742 61.111 32.08 0.00 35.81 2.78
2454 3036 3.361158 CGGCATGCCACCACGAAA 61.361 61.111 34.93 0.00 35.37 3.46
2483 3065 4.487412 CTCGGGTGTACGCCGTCC 62.487 72.222 19.00 4.81 33.44 4.79
2488 3070 4.112341 AGTCGCTCGGGTGTACGC 62.112 66.667 0.00 0.00 0.00 4.42
2489 3071 2.099831 GAGTCGCTCGGGTGTACG 59.900 66.667 0.00 0.00 0.00 3.67
2512 3094 4.436998 CTCCTGTCACGGACCGCC 62.437 72.222 15.39 2.53 0.00 6.13
2513 3095 4.436998 CCTCCTGTCACGGACCGC 62.437 72.222 15.39 0.00 0.00 5.68
2514 3096 2.675423 TCCTCCTGTCACGGACCG 60.675 66.667 13.61 13.61 0.00 4.79
2515 3097 2.971452 GTCCTCCTGTCACGGACC 59.029 66.667 0.00 0.00 41.00 4.46
2516 3098 1.258445 ATGGTCCTCCTGTCACGGAC 61.258 60.000 0.00 0.00 45.02 4.79
2517 3099 0.333652 TATGGTCCTCCTGTCACGGA 59.666 55.000 0.00 0.00 34.23 4.69
2518 3100 0.747255 CTATGGTCCTCCTGTCACGG 59.253 60.000 0.00 0.00 34.23 4.94
2519 3101 0.747255 CCTATGGTCCTCCTGTCACG 59.253 60.000 0.00 0.00 34.23 4.35
2520 3102 0.466124 GCCTATGGTCCTCCTGTCAC 59.534 60.000 0.00 0.00 34.23 3.67
2521 3103 0.042581 TGCCTATGGTCCTCCTGTCA 59.957 55.000 0.00 0.00 34.23 3.58
2522 3104 0.466124 GTGCCTATGGTCCTCCTGTC 59.534 60.000 0.00 0.00 34.23 3.51
2523 3105 1.330655 CGTGCCTATGGTCCTCCTGT 61.331 60.000 0.00 0.00 34.23 4.00
2524 3106 1.043116 TCGTGCCTATGGTCCTCCTG 61.043 60.000 0.00 0.00 34.23 3.86
2525 3107 0.105453 ATCGTGCCTATGGTCCTCCT 60.105 55.000 0.00 0.00 34.23 3.69
2526 3108 0.318762 GATCGTGCCTATGGTCCTCC 59.681 60.000 0.00 0.00 0.00 4.30
2527 3109 0.039074 CGATCGTGCCTATGGTCCTC 60.039 60.000 7.03 0.00 0.00 3.71
2528 3110 1.464376 CCGATCGTGCCTATGGTCCT 61.464 60.000 15.09 0.00 0.00 3.85
2529 3111 1.006102 CCGATCGTGCCTATGGTCC 60.006 63.158 15.09 0.00 0.00 4.46
2530 3112 1.006102 CCCGATCGTGCCTATGGTC 60.006 63.158 15.09 0.00 0.00 4.02
2531 3113 2.507854 CCCCGATCGTGCCTATGGT 61.508 63.158 15.09 0.00 0.00 3.55
2532 3114 2.343758 CCCCGATCGTGCCTATGG 59.656 66.667 15.09 5.85 0.00 2.74
2533 3115 2.357517 GCCCCGATCGTGCCTATG 60.358 66.667 15.09 0.00 0.00 2.23
2534 3116 3.626924 GGCCCCGATCGTGCCTAT 61.627 66.667 28.78 0.00 42.01 2.57
2539 3121 4.175337 ATGGTGGCCCCGATCGTG 62.175 66.667 15.09 1.60 35.15 4.35
2540 3122 3.861797 GATGGTGGCCCCGATCGT 61.862 66.667 15.09 0.00 35.15 3.73
2541 3123 3.182590 ATGATGGTGGCCCCGATCG 62.183 63.158 8.51 8.51 35.15 3.69
2542 3124 1.601759 CATGATGGTGGCCCCGATC 60.602 63.158 0.00 0.64 35.15 3.69
2543 3125 2.517414 CATGATGGTGGCCCCGAT 59.483 61.111 0.00 0.00 35.15 4.18
2544 3126 4.504596 GCATGATGGTGGCCCCGA 62.505 66.667 0.00 0.00 35.15 5.14
2549 3131 3.896133 CTGCGGCATGATGGTGGC 61.896 66.667 1.75 0.00 40.91 5.01
2550 3132 1.597797 AAACTGCGGCATGATGGTGG 61.598 55.000 1.75 0.00 0.00 4.61
2551 3133 0.244450 AAAACTGCGGCATGATGGTG 59.756 50.000 1.75 0.00 0.00 4.17
2552 3134 0.244450 CAAAACTGCGGCATGATGGT 59.756 50.000 1.75 0.00 0.00 3.55
2553 3135 0.527113 TCAAAACTGCGGCATGATGG 59.473 50.000 1.75 0.00 0.00 3.51
2554 3136 2.456989 GATCAAAACTGCGGCATGATG 58.543 47.619 18.52 9.45 31.24 3.07
2555 3137 1.064505 CGATCAAAACTGCGGCATGAT 59.935 47.619 14.71 14.71 33.64 2.45
2556 3138 0.447406 CGATCAAAACTGCGGCATGA 59.553 50.000 1.75 4.61 0.00 3.07
2557 3139 1.135699 GCGATCAAAACTGCGGCATG 61.136 55.000 1.75 0.00 0.00 4.06
2558 3140 1.137404 GCGATCAAAACTGCGGCAT 59.863 52.632 1.75 0.00 0.00 4.40
2559 3141 2.560861 GCGATCAAAACTGCGGCA 59.439 55.556 1.29 1.29 0.00 5.69
2560 3142 2.574212 CGCGATCAAAACTGCGGC 60.574 61.111 0.00 0.00 46.31 6.53
2563 3145 2.202479 GGGCGCGATCAAAACTGC 60.202 61.111 12.10 0.00 0.00 4.40
2564 3146 1.425428 GAGGGCGCGATCAAAACTG 59.575 57.895 12.10 0.00 0.00 3.16
2565 3147 2.100631 CGAGGGCGCGATCAAAACT 61.101 57.895 12.10 0.00 0.00 2.66
2566 3148 2.388232 ACGAGGGCGCGATCAAAAC 61.388 57.895 12.10 0.00 42.48 2.43
2567 3149 2.047655 ACGAGGGCGCGATCAAAA 60.048 55.556 12.10 0.00 42.48 2.44
2568 3150 2.813474 CACGAGGGCGCGATCAAA 60.813 61.111 12.10 0.00 42.48 2.69
2569 3151 3.583276 AACACGAGGGCGCGATCAA 62.583 57.895 12.10 0.00 42.48 2.57
2570 3152 4.063967 AACACGAGGGCGCGATCA 62.064 61.111 12.10 0.00 42.48 2.92
2571 3153 3.554692 CAACACGAGGGCGCGATC 61.555 66.667 12.10 2.85 42.48 3.69
2578 3160 4.722700 CCTGGGCCAACACGAGGG 62.723 72.222 8.04 0.00 31.03 4.30
2597 3179 3.403558 GTCCAGCCTCCCTGTCCC 61.404 72.222 0.00 0.00 40.06 4.46
2598 3180 3.403558 GGTCCAGCCTCCCTGTCC 61.404 72.222 0.00 0.00 40.06 4.02
2599 3181 3.775654 CGGTCCAGCCTCCCTGTC 61.776 72.222 0.00 0.00 40.06 3.51
2600 3182 4.640690 ACGGTCCAGCCTCCCTGT 62.641 66.667 0.00 0.00 40.06 4.00
2601 3183 4.087892 CACGGTCCAGCCTCCCTG 62.088 72.222 0.00 0.00 41.41 4.45
2602 3184 2.741878 TAACACGGTCCAGCCTCCCT 62.742 60.000 0.00 0.00 34.25 4.20
2603 3185 2.240162 CTAACACGGTCCAGCCTCCC 62.240 65.000 0.00 0.00 34.25 4.30
2604 3186 1.218316 CTAACACGGTCCAGCCTCC 59.782 63.158 0.00 0.00 34.25 4.30
2605 3187 1.218316 CCTAACACGGTCCAGCCTC 59.782 63.158 0.00 0.00 34.25 4.70
2606 3188 2.291043 CCCTAACACGGTCCAGCCT 61.291 63.158 0.00 0.00 34.25 4.58
2607 3189 2.267961 CCCTAACACGGTCCAGCC 59.732 66.667 0.00 0.00 0.00 4.85
2608 3190 2.436115 GCCCTAACACGGTCCAGC 60.436 66.667 0.00 0.00 0.00 4.85
2609 3191 0.035439 AATGCCCTAACACGGTCCAG 60.035 55.000 0.00 0.00 0.00 3.86
2610 3192 0.402504 AAATGCCCTAACACGGTCCA 59.597 50.000 0.00 0.00 0.00 4.02
2611 3193 1.092348 GAAATGCCCTAACACGGTCC 58.908 55.000 0.00 0.00 0.00 4.46
2612 3194 1.092348 GGAAATGCCCTAACACGGTC 58.908 55.000 0.00 0.00 0.00 4.79
2613 3195 3.259592 GGAAATGCCCTAACACGGT 57.740 52.632 0.00 0.00 0.00 4.83
2624 3206 0.451783 CACACTAAGGCGGGAAATGC 59.548 55.000 0.00 0.00 0.00 3.56
2625 3207 1.821216 ACACACTAAGGCGGGAAATG 58.179 50.000 0.00 0.00 0.00 2.32
2626 3208 2.579410 AACACACTAAGGCGGGAAAT 57.421 45.000 0.00 0.00 0.00 2.17
2627 3209 2.351706 AAACACACTAAGGCGGGAAA 57.648 45.000 0.00 0.00 0.00 3.13
2628 3210 1.950909 CAAAACACACTAAGGCGGGAA 59.049 47.619 0.00 0.00 0.00 3.97
2629 3211 1.600023 CAAAACACACTAAGGCGGGA 58.400 50.000 0.00 0.00 0.00 5.14
2630 3212 0.596082 CCAAAACACACTAAGGCGGG 59.404 55.000 0.00 0.00 0.00 6.13
2631 3213 1.001815 CACCAAAACACACTAAGGCGG 60.002 52.381 0.00 0.00 0.00 6.13
2632 3214 1.944024 TCACCAAAACACACTAAGGCG 59.056 47.619 0.00 0.00 0.00 5.52
2633 3215 3.568007 TCATCACCAAAACACACTAAGGC 59.432 43.478 0.00 0.00 0.00 4.35
2634 3216 5.473162 TCATCATCACCAAAACACACTAAGG 59.527 40.000 0.00 0.00 0.00 2.69
2635 3217 6.017192 TGTCATCATCACCAAAACACACTAAG 60.017 38.462 0.00 0.00 0.00 2.18
2636 3218 5.825151 TGTCATCATCACCAAAACACACTAA 59.175 36.000 0.00 0.00 0.00 2.24
2637 3219 5.372373 TGTCATCATCACCAAAACACACTA 58.628 37.500 0.00 0.00 0.00 2.74
2638 3220 4.206375 TGTCATCATCACCAAAACACACT 58.794 39.130 0.00 0.00 0.00 3.55
2639 3221 4.566545 TGTCATCATCACCAAAACACAC 57.433 40.909 0.00 0.00 0.00 3.82
2640 3222 4.644234 AGTTGTCATCATCACCAAAACACA 59.356 37.500 0.00 0.00 0.00 3.72
2641 3223 5.186996 AGTTGTCATCATCACCAAAACAC 57.813 39.130 0.00 0.00 0.00 3.32
2642 3224 4.886489 TGAGTTGTCATCATCACCAAAACA 59.114 37.500 0.00 0.00 0.00 2.83
2643 3225 5.215160 GTGAGTTGTCATCATCACCAAAAC 58.785 41.667 0.00 0.00 36.83 2.43
2644 3226 4.886489 TGTGAGTTGTCATCATCACCAAAA 59.114 37.500 9.05 0.00 41.05 2.44
2645 3227 4.459330 TGTGAGTTGTCATCATCACCAAA 58.541 39.130 9.05 0.00 41.05 3.28
2646 3228 4.084011 TGTGAGTTGTCATCATCACCAA 57.916 40.909 9.05 0.00 41.05 3.67
2647 3229 3.767902 TGTGAGTTGTCATCATCACCA 57.232 42.857 9.05 0.00 41.05 4.17
2648 3230 5.396484 CAAATGTGAGTTGTCATCATCACC 58.604 41.667 9.05 0.00 41.05 4.02
2649 3231 4.855388 GCAAATGTGAGTTGTCATCATCAC 59.145 41.667 0.00 0.00 41.89 3.06
2650 3232 4.378666 CGCAAATGTGAGTTGTCATCATCA 60.379 41.667 0.00 0.00 34.36 3.07
2651 3233 4.093514 CGCAAATGTGAGTTGTCATCATC 58.906 43.478 0.00 0.00 34.36 2.92
2652 3234 3.119743 CCGCAAATGTGAGTTGTCATCAT 60.120 43.478 0.00 0.00 34.36 2.45
2653 3235 2.226200 CCGCAAATGTGAGTTGTCATCA 59.774 45.455 0.00 0.00 34.36 3.07
2654 3236 2.483877 TCCGCAAATGTGAGTTGTCATC 59.516 45.455 0.00 0.00 34.36 2.92
2655 3237 2.226437 GTCCGCAAATGTGAGTTGTCAT 59.774 45.455 0.00 0.00 34.36 3.06
2656 3238 1.601903 GTCCGCAAATGTGAGTTGTCA 59.398 47.619 0.00 0.00 0.00 3.58
2657 3239 1.873591 AGTCCGCAAATGTGAGTTGTC 59.126 47.619 0.00 0.00 0.00 3.18
2658 3240 1.967319 AGTCCGCAAATGTGAGTTGT 58.033 45.000 0.00 0.00 0.00 3.32
2659 3241 4.651994 GATTAGTCCGCAAATGTGAGTTG 58.348 43.478 0.00 0.00 0.00 3.16
2660 3242 3.370978 CGATTAGTCCGCAAATGTGAGTT 59.629 43.478 0.00 0.00 0.00 3.01
2661 3243 2.930040 CGATTAGTCCGCAAATGTGAGT 59.070 45.455 0.00 0.00 0.00 3.41
2662 3244 2.930040 ACGATTAGTCCGCAAATGTGAG 59.070 45.455 0.00 0.00 0.00 3.51
2663 3245 2.670905 CACGATTAGTCCGCAAATGTGA 59.329 45.455 0.00 0.00 0.00 3.58
2664 3246 2.415168 ACACGATTAGTCCGCAAATGTG 59.585 45.455 0.00 0.00 0.00 3.21
2665 3247 2.415168 CACACGATTAGTCCGCAAATGT 59.585 45.455 0.00 0.00 0.00 2.71
2666 3248 2.787723 GCACACGATTAGTCCGCAAATG 60.788 50.000 0.00 0.00 0.00 2.32
2667 3249 1.396996 GCACACGATTAGTCCGCAAAT 59.603 47.619 0.00 0.00 0.00 2.32
2668 3250 0.793861 GCACACGATTAGTCCGCAAA 59.206 50.000 0.00 0.00 0.00 3.68
2669 3251 1.017177 GGCACACGATTAGTCCGCAA 61.017 55.000 0.00 0.00 0.00 4.85
2670 3252 1.447140 GGCACACGATTAGTCCGCA 60.447 57.895 0.00 0.00 0.00 5.69
2671 3253 1.017177 TTGGCACACGATTAGTCCGC 61.017 55.000 0.00 0.00 39.29 5.54
2672 3254 0.999406 CTTGGCACACGATTAGTCCG 59.001 55.000 0.00 0.00 39.29 4.79
2673 3255 2.094762 ACTTGGCACACGATTAGTCC 57.905 50.000 0.00 0.00 39.29 3.85
2674 3256 4.243270 AGTAACTTGGCACACGATTAGTC 58.757 43.478 0.00 0.00 39.29 2.59
2675 3257 4.243270 GAGTAACTTGGCACACGATTAGT 58.757 43.478 0.00 0.00 39.29 2.24
2676 3258 4.242475 TGAGTAACTTGGCACACGATTAG 58.758 43.478 0.00 0.00 39.29 1.73
2677 3259 4.242475 CTGAGTAACTTGGCACACGATTA 58.758 43.478 0.00 0.00 39.29 1.75
2678 3260 3.067106 CTGAGTAACTTGGCACACGATT 58.933 45.455 0.00 0.00 39.29 3.34
2679 3261 2.612972 CCTGAGTAACTTGGCACACGAT 60.613 50.000 0.00 0.00 39.29 3.73
2680 3262 1.270094 CCTGAGTAACTTGGCACACGA 60.270 52.381 0.00 0.00 39.29 4.35
2681 3263 1.148310 CCTGAGTAACTTGGCACACG 58.852 55.000 0.00 0.00 39.29 4.49
2682 3264 1.873591 CACCTGAGTAACTTGGCACAC 59.126 52.381 0.00 0.00 39.29 3.82
2683 3265 1.813862 GCACCTGAGTAACTTGGCACA 60.814 52.381 0.00 0.00 0.00 4.57
2684 3266 0.875059 GCACCTGAGTAACTTGGCAC 59.125 55.000 0.00 0.00 0.00 5.01
2685 3267 0.472044 TGCACCTGAGTAACTTGGCA 59.528 50.000 0.00 0.00 0.00 4.92
2686 3268 0.875059 GTGCACCTGAGTAACTTGGC 59.125 55.000 5.22 0.00 0.00 4.52
2687 3269 2.550830 AGTGCACCTGAGTAACTTGG 57.449 50.000 14.63 0.00 0.00 3.61
2688 3270 3.627577 ACAAAGTGCACCTGAGTAACTTG 59.372 43.478 20.28 9.89 34.16 3.16
2689 3271 3.886123 ACAAAGTGCACCTGAGTAACTT 58.114 40.909 20.28 0.30 34.93 2.66
2690 3272 3.560636 ACAAAGTGCACCTGAGTAACT 57.439 42.857 20.28 0.00 0.00 2.24
2691 3273 4.351192 CAAACAAAGTGCACCTGAGTAAC 58.649 43.478 20.28 0.00 0.00 2.50
2692 3274 3.380004 CCAAACAAAGTGCACCTGAGTAA 59.620 43.478 20.28 0.00 0.00 2.24
2693 3275 2.948979 CCAAACAAAGTGCACCTGAGTA 59.051 45.455 20.28 0.00 0.00 2.59
2694 3276 1.750778 CCAAACAAAGTGCACCTGAGT 59.249 47.619 20.28 9.32 0.00 3.41
2695 3277 1.750778 ACCAAACAAAGTGCACCTGAG 59.249 47.619 20.28 8.73 0.00 3.35
2696 3278 1.476085 CACCAAACAAAGTGCACCTGA 59.524 47.619 20.28 0.00 0.00 3.86
2697 3279 1.925229 CACCAAACAAAGTGCACCTG 58.075 50.000 14.63 14.00 0.00 4.00
2703 3285 2.184448 CGTCTTGCACCAAACAAAGTG 58.816 47.619 0.00 0.00 37.05 3.16
2704 3286 1.134175 CCGTCTTGCACCAAACAAAGT 59.866 47.619 0.00 0.00 0.00 2.66
2705 3287 1.134175 ACCGTCTTGCACCAAACAAAG 59.866 47.619 0.00 0.00 0.00 2.77
2706 3288 1.178276 ACCGTCTTGCACCAAACAAA 58.822 45.000 0.00 0.00 0.00 2.83
2707 3289 1.133407 GAACCGTCTTGCACCAAACAA 59.867 47.619 0.00 0.00 0.00 2.83
2708 3290 0.736053 GAACCGTCTTGCACCAAACA 59.264 50.000 0.00 0.00 0.00 2.83
2709 3291 0.316689 CGAACCGTCTTGCACCAAAC 60.317 55.000 0.00 0.00 0.00 2.93
2710 3292 1.440938 CCGAACCGTCTTGCACCAAA 61.441 55.000 0.00 0.00 0.00 3.28
2711 3293 1.890041 CCGAACCGTCTTGCACCAA 60.890 57.895 0.00 0.00 0.00 3.67
2712 3294 2.280524 CCGAACCGTCTTGCACCA 60.281 61.111 0.00 0.00 0.00 4.17
2713 3295 3.723348 GCCGAACCGTCTTGCACC 61.723 66.667 0.00 0.00 0.00 5.01
2714 3296 1.852067 AATGCCGAACCGTCTTGCAC 61.852 55.000 0.00 0.00 33.61 4.57
2715 3297 1.573829 GAATGCCGAACCGTCTTGCA 61.574 55.000 0.00 0.00 34.79 4.08
2716 3298 1.134694 GAATGCCGAACCGTCTTGC 59.865 57.895 0.00 0.00 0.00 4.01
2717 3299 1.644786 GGGAATGCCGAACCGTCTTG 61.645 60.000 0.00 0.00 33.83 3.02
2718 3300 1.376812 GGGAATGCCGAACCGTCTT 60.377 57.895 0.00 0.00 33.83 3.01
2719 3301 2.240162 GAGGGAATGCCGAACCGTCT 62.240 60.000 0.00 0.00 36.20 4.18
2720 3302 1.814169 GAGGGAATGCCGAACCGTC 60.814 63.158 0.00 0.00 33.83 4.79
2721 3303 2.267961 GAGGGAATGCCGAACCGT 59.732 61.111 0.00 0.00 33.83 4.83
2722 3304 2.513897 GGAGGGAATGCCGAACCG 60.514 66.667 0.00 0.00 33.83 4.44
2723 3305 1.452108 CTGGAGGGAATGCCGAACC 60.452 63.158 0.00 0.00 33.83 3.62
2724 3306 0.744771 GTCTGGAGGGAATGCCGAAC 60.745 60.000 0.00 0.00 33.83 3.95
2725 3307 1.602237 GTCTGGAGGGAATGCCGAA 59.398 57.895 0.00 0.00 33.83 4.30
2726 3308 2.721167 CGTCTGGAGGGAATGCCGA 61.721 63.158 0.00 0.00 33.83 5.54
2727 3309 2.202932 CGTCTGGAGGGAATGCCG 60.203 66.667 0.00 0.00 33.83 5.69
2728 3310 0.035439 TTTCGTCTGGAGGGAATGCC 60.035 55.000 0.00 0.00 0.00 4.40
2729 3311 1.821216 TTTTCGTCTGGAGGGAATGC 58.179 50.000 0.00 0.00 0.00 3.56
2730 3312 3.674997 TCTTTTTCGTCTGGAGGGAATG 58.325 45.455 0.00 0.00 0.00 2.67
2731 3313 4.518249 GATCTTTTTCGTCTGGAGGGAAT 58.482 43.478 0.00 0.00 0.00 3.01
2732 3314 3.616560 CGATCTTTTTCGTCTGGAGGGAA 60.617 47.826 0.00 0.00 34.46 3.97
2733 3315 2.094182 CGATCTTTTTCGTCTGGAGGGA 60.094 50.000 0.00 0.00 34.46 4.20
2734 3316 2.094182 TCGATCTTTTTCGTCTGGAGGG 60.094 50.000 0.00 0.00 40.03 4.30
2735 3317 3.232213 TCGATCTTTTTCGTCTGGAGG 57.768 47.619 0.00 0.00 40.03 4.30
2736 3318 4.324936 GTCTTCGATCTTTTTCGTCTGGAG 59.675 45.833 0.00 0.00 40.03 3.86
2737 3319 4.235360 GTCTTCGATCTTTTTCGTCTGGA 58.765 43.478 0.00 0.00 40.03 3.86
2738 3320 3.059570 CGTCTTCGATCTTTTTCGTCTGG 59.940 47.826 0.00 0.00 40.03 3.86
2739 3321 3.059570 CCGTCTTCGATCTTTTTCGTCTG 59.940 47.826 0.00 0.00 40.03 3.51
2740 3322 3.243336 CCGTCTTCGATCTTTTTCGTCT 58.757 45.455 0.00 0.00 40.03 4.18
2741 3323 2.985139 ACCGTCTTCGATCTTTTTCGTC 59.015 45.455 0.00 0.00 40.03 4.20
2742 3324 2.729882 CACCGTCTTCGATCTTTTTCGT 59.270 45.455 0.00 0.00 40.03 3.85
2743 3325 2.729882 ACACCGTCTTCGATCTTTTTCG 59.270 45.455 0.00 0.00 40.46 3.46
2744 3326 4.727235 AACACCGTCTTCGATCTTTTTC 57.273 40.909 0.00 0.00 39.71 2.29
2745 3327 5.494632 AAAACACCGTCTTCGATCTTTTT 57.505 34.783 0.00 0.00 39.71 1.94
2746 3328 4.318546 CGAAAACACCGTCTTCGATCTTTT 60.319 41.667 0.00 0.00 43.53 2.27
2747 3329 3.183775 CGAAAACACCGTCTTCGATCTTT 59.816 43.478 0.00 0.00 43.53 2.52
2748 3330 2.729882 CGAAAACACCGTCTTCGATCTT 59.270 45.455 0.00 0.00 43.53 2.40
2749 3331 2.030540 TCGAAAACACCGTCTTCGATCT 60.031 45.455 1.40 0.00 44.26 2.75
2750 3332 2.322161 TCGAAAACACCGTCTTCGATC 58.678 47.619 1.40 0.00 44.26 3.69
2751 3333 2.427232 TCGAAAACACCGTCTTCGAT 57.573 45.000 1.40 0.00 44.26 3.59
2752 3334 1.480205 GTCGAAAACACCGTCTTCGA 58.520 50.000 1.40 1.40 46.23 3.71
2753 3335 0.158096 CGTCGAAAACACCGTCTTCG 59.842 55.000 0.00 0.00 42.49 3.79
2754 3336 1.071698 CACGTCGAAAACACCGTCTTC 60.072 52.381 0.00 0.00 0.00 2.87
2755 3337 0.925466 CACGTCGAAAACACCGTCTT 59.075 50.000 0.00 0.00 0.00 3.01
2756 3338 0.179129 ACACGTCGAAAACACCGTCT 60.179 50.000 0.00 0.00 0.00 4.18
2757 3339 0.646895 AACACGTCGAAAACACCGTC 59.353 50.000 0.00 0.00 0.00 4.79
2758 3340 1.077915 AAACACGTCGAAAACACCGT 58.922 45.000 0.00 0.00 0.00 4.83
2759 3341 2.162371 AAAACACGTCGAAAACACCG 57.838 45.000 0.00 0.00 0.00 4.94
2760 3342 5.967088 AGAAATAAAACACGTCGAAAACACC 59.033 36.000 0.00 0.00 0.00 4.16
2761 3343 7.427238 AAGAAATAAAACACGTCGAAAACAC 57.573 32.000 0.00 0.00 0.00 3.32
2762 3344 7.008447 CCAAAGAAATAAAACACGTCGAAAACA 59.992 33.333 0.00 0.00 0.00 2.83
2763 3345 7.008538 ACCAAAGAAATAAAACACGTCGAAAAC 59.991 33.333 0.00 0.00 0.00 2.43
2764 3346 7.028361 ACCAAAGAAATAAAACACGTCGAAAA 58.972 30.769 0.00 0.00 0.00 2.29
2765 3347 6.553524 ACCAAAGAAATAAAACACGTCGAAA 58.446 32.000 0.00 0.00 0.00 3.46
2766 3348 6.121613 ACCAAAGAAATAAAACACGTCGAA 57.878 33.333 0.00 0.00 0.00 3.71
2767 3349 5.556758 CGACCAAAGAAATAAAACACGTCGA 60.557 40.000 0.00 0.00 41.24 4.20
2768 3350 4.605594 CGACCAAAGAAATAAAACACGTCG 59.394 41.667 0.00 0.00 34.26 5.12
2769 3351 5.504392 ACGACCAAAGAAATAAAACACGTC 58.496 37.500 0.00 0.00 0.00 4.34
2770 3352 5.488645 ACGACCAAAGAAATAAAACACGT 57.511 34.783 0.00 0.00 0.00 4.49
2771 3353 6.073657 TCCTACGACCAAAGAAATAAAACACG 60.074 38.462 0.00 0.00 0.00 4.49
2772 3354 7.193377 TCCTACGACCAAAGAAATAAAACAC 57.807 36.000 0.00 0.00 0.00 3.32
2773 3355 7.804843 TTCCTACGACCAAAGAAATAAAACA 57.195 32.000 0.00 0.00 0.00 2.83
2774 3356 7.592533 GGTTTCCTACGACCAAAGAAATAAAAC 59.407 37.037 0.00 0.00 35.95 2.43
2775 3357 7.255555 GGGTTTCCTACGACCAAAGAAATAAAA 60.256 37.037 0.00 0.00 37.68 1.52
2776 3358 6.207221 GGGTTTCCTACGACCAAAGAAATAAA 59.793 38.462 0.00 0.00 37.68 1.40
2777 3359 5.706833 GGGTTTCCTACGACCAAAGAAATAA 59.293 40.000 0.00 0.00 37.68 1.40
2778 3360 5.247862 GGGTTTCCTACGACCAAAGAAATA 58.752 41.667 0.00 0.00 37.68 1.40
2779 3361 4.077108 GGGTTTCCTACGACCAAAGAAAT 58.923 43.478 0.00 0.00 37.68 2.17
2780 3362 3.479489 GGGTTTCCTACGACCAAAGAAA 58.521 45.455 0.00 0.00 37.68 2.52
2781 3363 2.548493 CGGGTTTCCTACGACCAAAGAA 60.548 50.000 0.00 0.00 37.68 2.52
2782 3364 1.001181 CGGGTTTCCTACGACCAAAGA 59.999 52.381 0.00 0.00 37.68 2.52
2783 3365 1.270465 ACGGGTTTCCTACGACCAAAG 60.270 52.381 0.00 0.00 37.68 2.77
2784 3366 0.758123 ACGGGTTTCCTACGACCAAA 59.242 50.000 0.00 0.00 37.68 3.28
2785 3367 1.272212 GTACGGGTTTCCTACGACCAA 59.728 52.381 0.00 0.00 37.68 3.67
2786 3368 0.887933 GTACGGGTTTCCTACGACCA 59.112 55.000 0.00 0.00 37.68 4.02
2787 3369 1.177401 AGTACGGGTTTCCTACGACC 58.823 55.000 0.00 0.00 35.14 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.