Multiple sequence alignment - TraesCS2A01G350500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G350500 chr2A 100.000 2402 0 0 1 2402 590721069 590718668 0.000000e+00 4436
1 TraesCS2A01G350500 chr2A 94.303 1615 57 9 1 1612 590691506 590689924 0.000000e+00 2440
2 TraesCS2A01G350500 chr2A 94.366 1136 50 9 767 1891 590726437 590725305 0.000000e+00 1731
3 TraesCS2A01G350500 chr2A 97.704 479 10 1 1925 2402 48386270 48385792 0.000000e+00 822
4 TraesCS2A01G350500 chr2A 97.286 479 12 1 1924 2402 3473561 3473084 0.000000e+00 811
5 TraesCS2A01G350500 chr2D 92.478 1130 54 10 767 1891 446641188 446640085 0.000000e+00 1587
6 TraesCS2A01G350500 chr2D 94.434 521 28 1 1 521 446608454 446607935 0.000000e+00 800
7 TraesCS2A01G350500 chr2D 90.981 377 28 5 519 894 446607774 446607403 9.910000e-139 503
8 TraesCS2A01G350500 chr2B 91.895 950 57 12 767 1703 526525123 526524181 0.000000e+00 1310
9 TraesCS2A01G350500 chr2B 90.060 503 40 5 969 1465 526397658 526397160 0.000000e+00 643
10 TraesCS2A01G350500 chr2B 90.761 184 10 4 1460 1638 526396998 526396817 3.090000e-59 239
11 TraesCS2A01G350500 chr2B 88.148 135 14 2 1741 1873 526524176 526524042 2.470000e-35 159
12 TraesCS2A01G350500 chr5A 97.908 478 10 0 1925 2402 642986337 642985860 0.000000e+00 828
13 TraesCS2A01G350500 chr5A 97.490 478 12 0 1925 2402 150680628 150680151 0.000000e+00 817
14 TraesCS2A01G350500 chr5A 96.901 484 14 1 1920 2402 361954018 361953535 0.000000e+00 809
15 TraesCS2A01G350500 chr7A 97.490 478 12 0 1925 2402 538202862 538202385 0.000000e+00 817
16 TraesCS2A01G350500 chr3A 97.490 478 12 0 1925 2402 481359323 481358846 0.000000e+00 817
17 TraesCS2A01G350500 chr3A 97.495 479 11 1 1924 2402 481371414 481370937 0.000000e+00 817
18 TraesCS2A01G350500 chr4A 96.741 491 13 3 1912 2401 83529920 83530408 0.000000e+00 815
19 TraesCS2A01G350500 chr7D 83.594 256 29 6 339 591 42937785 42937540 6.680000e-56 228
20 TraesCS2A01G350500 chr7D 81.287 171 27 5 1690 1857 5318787 5318955 1.500000e-27 134
21 TraesCS2A01G350500 chr6B 79.037 353 47 17 276 620 683233195 683232862 1.450000e-52 217
22 TraesCS2A01G350500 chr5D 82.081 173 21 7 1690 1857 42067800 42067967 3.220000e-29 139
23 TraesCS2A01G350500 chr5B 82.036 167 26 4 1693 1857 36612052 36611888 3.220000e-29 139
24 TraesCS2A01G350500 chr4B 82.036 167 26 4 1693 1857 601746207 601746043 3.220000e-29 139
25 TraesCS2A01G350500 chr6D 80.108 186 30 7 1690 1870 337847119 337847302 5.390000e-27 132
26 TraesCS2A01G350500 chr1A 80.588 170 31 2 1689 1857 2826171 2826003 1.940000e-26 130


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G350500 chr2A 590718668 590721069 2401 True 4436.0 4436 100.0000 1 2402 1 chr2A.!!$R4 2401
1 TraesCS2A01G350500 chr2A 590689924 590691506 1582 True 2440.0 2440 94.3030 1 1612 1 chr2A.!!$R3 1611
2 TraesCS2A01G350500 chr2A 590725305 590726437 1132 True 1731.0 1731 94.3660 767 1891 1 chr2A.!!$R5 1124
3 TraesCS2A01G350500 chr2D 446640085 446641188 1103 True 1587.0 1587 92.4780 767 1891 1 chr2D.!!$R1 1124
4 TraesCS2A01G350500 chr2D 446607403 446608454 1051 True 651.5 800 92.7075 1 894 2 chr2D.!!$R2 893
5 TraesCS2A01G350500 chr2B 526524042 526525123 1081 True 734.5 1310 90.0215 767 1873 2 chr2B.!!$R2 1106
6 TraesCS2A01G350500 chr2B 526396817 526397658 841 True 441.0 643 90.4105 969 1638 2 chr2B.!!$R1 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 801 0.321564 TGCGTGGATTCCTGTTCCTG 60.322 55.0 3.95 0.0 34.17 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2020 2382 0.031721 AGTCCGTCGAGTGAAACACC 59.968 55.0 0.0 0.0 41.43 4.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
141 142 7.041372 GGTGAGTAGCTTAAACAAGATGACAAA 60.041 37.037 0.00 0.00 0.00 2.83
166 167 5.641209 TGTTTGTGACCCAAAGAATGTTTTG 59.359 36.000 0.00 0.00 43.52 2.44
222 223 3.198068 GGATCGCAACAGCTTGAAGATA 58.802 45.455 0.00 0.00 30.88 1.98
411 412 2.524569 AAAGACAAAATTGTGGCCCG 57.475 45.000 0.00 0.00 42.43 6.13
465 466 9.651913 AAATACATATTTGCCTTGTTTTGGTAG 57.348 29.630 0.00 0.00 34.79 3.18
475 476 0.589708 GTTTTGGTAGGCCACGTGTC 59.410 55.000 15.65 0.00 46.01 3.67
634 801 0.321564 TGCGTGGATTCCTGTTCCTG 60.322 55.000 3.95 0.00 34.17 3.86
638 805 3.198068 CGTGGATTCCTGTTCCTGTATG 58.802 50.000 3.95 0.00 34.17 2.39
639 806 3.118775 CGTGGATTCCTGTTCCTGTATGA 60.119 47.826 3.95 0.00 34.17 2.15
876 1043 6.474140 TGGCTAACAAACCGAGATAAGATA 57.526 37.500 0.00 0.00 0.00 1.98
937 1104 1.527611 ATCATCACGCCTGCCCATG 60.528 57.895 0.00 0.00 0.00 3.66
1389 1570 1.051812 ATGTGATGGTCCTCCGATCC 58.948 55.000 0.00 0.00 36.30 3.36
1705 2065 0.622136 TGTAGTCGGCTCCAGTAGGA 59.378 55.000 0.00 0.00 43.21 2.94
1710 2070 2.351244 CGGCTCCAGTAGGACAGCA 61.351 63.158 0.00 0.00 39.61 4.41
1738 2098 2.680913 GCGCATCAGTGGCTCGTTT 61.681 57.895 0.30 0.00 0.00 3.60
1745 2105 3.188159 TCAGTGGCTCGTTTTAACACT 57.812 42.857 0.00 0.00 42.62 3.55
1758 2118 1.674359 TAACACTGGCAGTGGTTGTG 58.326 50.000 41.21 23.18 45.36 3.33
1759 2119 0.323360 AACACTGGCAGTGGTTGTGT 60.323 50.000 41.21 23.80 45.36 3.72
1760 2120 1.890573 AACACTGGCAGTGGTTGTGTT 60.891 47.619 41.21 27.40 45.36 3.32
1918 2280 8.844865 AGATAGATAGATAGAGAGAGAGAGCA 57.155 38.462 0.00 0.00 0.00 4.26
1919 2281 8.700051 AGATAGATAGATAGAGAGAGAGAGCAC 58.300 40.741 0.00 0.00 0.00 4.40
1920 2282 5.724328 AGATAGATAGAGAGAGAGAGCACG 58.276 45.833 0.00 0.00 0.00 5.34
1921 2283 2.494059 AGATAGAGAGAGAGAGCACGC 58.506 52.381 0.00 0.00 0.00 5.34
1922 2284 2.158827 AGATAGAGAGAGAGAGCACGCA 60.159 50.000 0.00 0.00 0.00 5.24
1923 2285 1.662517 TAGAGAGAGAGAGCACGCAG 58.337 55.000 0.00 0.00 0.00 5.18
1937 2299 2.680312 ACGCAGTGATGAAGCTATGT 57.320 45.000 0.00 0.00 42.51 2.29
1938 2300 3.801114 ACGCAGTGATGAAGCTATGTA 57.199 42.857 0.00 0.00 42.51 2.29
1939 2301 4.327982 ACGCAGTGATGAAGCTATGTAT 57.672 40.909 0.00 0.00 42.51 2.29
1940 2302 4.302455 ACGCAGTGATGAAGCTATGTATC 58.698 43.478 0.00 0.00 42.51 2.24
1941 2303 4.038522 ACGCAGTGATGAAGCTATGTATCT 59.961 41.667 0.00 0.00 42.51 1.98
1942 2304 5.241728 ACGCAGTGATGAAGCTATGTATCTA 59.758 40.000 0.00 0.00 42.51 1.98
1943 2305 5.799435 CGCAGTGATGAAGCTATGTATCTAG 59.201 44.000 0.00 0.00 0.00 2.43
1944 2306 6.098679 GCAGTGATGAAGCTATGTATCTAGG 58.901 44.000 0.00 0.00 0.00 3.02
1945 2307 6.629128 CAGTGATGAAGCTATGTATCTAGGG 58.371 44.000 0.00 0.00 0.00 3.53
1946 2308 6.210385 CAGTGATGAAGCTATGTATCTAGGGT 59.790 42.308 0.00 0.00 0.00 4.34
1947 2309 7.394641 CAGTGATGAAGCTATGTATCTAGGGTA 59.605 40.741 0.00 0.00 0.00 3.69
1948 2310 7.613801 AGTGATGAAGCTATGTATCTAGGGTAG 59.386 40.741 0.00 0.00 0.00 3.18
1949 2311 6.892456 TGATGAAGCTATGTATCTAGGGTAGG 59.108 42.308 0.00 0.00 0.00 3.18
1950 2312 5.580998 TGAAGCTATGTATCTAGGGTAGGG 58.419 45.833 0.00 0.00 0.00 3.53
1951 2313 5.076039 TGAAGCTATGTATCTAGGGTAGGGT 59.924 44.000 0.00 0.00 0.00 4.34
1952 2314 5.195848 AGCTATGTATCTAGGGTAGGGTC 57.804 47.826 0.00 0.00 0.00 4.46
1953 2315 4.606697 AGCTATGTATCTAGGGTAGGGTCA 59.393 45.833 0.00 0.00 0.00 4.02
1954 2316 5.256626 AGCTATGTATCTAGGGTAGGGTCAT 59.743 44.000 0.00 0.00 0.00 3.06
1955 2317 5.361285 GCTATGTATCTAGGGTAGGGTCATG 59.639 48.000 0.00 0.00 0.00 3.07
1956 2318 5.616975 ATGTATCTAGGGTAGGGTCATGA 57.383 43.478 0.00 0.00 0.00 3.07
1957 2319 5.412617 TGTATCTAGGGTAGGGTCATGAA 57.587 43.478 0.00 0.00 0.00 2.57
1958 2320 5.145564 TGTATCTAGGGTAGGGTCATGAAC 58.854 45.833 0.73 0.73 0.00 3.18
1969 2331 2.863809 GGTCATGAACCTGTCCAAACT 58.136 47.619 0.00 0.00 45.45 2.66
1970 2332 2.554032 GGTCATGAACCTGTCCAAACTG 59.446 50.000 0.00 0.00 45.45 3.16
1971 2333 3.476552 GTCATGAACCTGTCCAAACTGA 58.523 45.455 0.00 0.00 0.00 3.41
1972 2334 3.251004 GTCATGAACCTGTCCAAACTGAC 59.749 47.826 0.00 0.00 35.77 3.51
1973 2335 2.341846 TGAACCTGTCCAAACTGACC 57.658 50.000 0.00 0.00 34.25 4.02
1974 2336 1.843851 TGAACCTGTCCAAACTGACCT 59.156 47.619 0.00 0.00 34.25 3.85
1975 2337 3.042682 TGAACCTGTCCAAACTGACCTA 58.957 45.455 0.00 0.00 34.25 3.08
1976 2338 3.181458 TGAACCTGTCCAAACTGACCTAC 60.181 47.826 0.00 0.00 34.25 3.18
1977 2339 1.697982 ACCTGTCCAAACTGACCTACC 59.302 52.381 0.00 0.00 34.25 3.18
1978 2340 1.003233 CCTGTCCAAACTGACCTACCC 59.997 57.143 0.00 0.00 34.25 3.69
1979 2341 1.697432 CTGTCCAAACTGACCTACCCA 59.303 52.381 0.00 0.00 34.25 4.51
1980 2342 2.105821 CTGTCCAAACTGACCTACCCAA 59.894 50.000 0.00 0.00 34.25 4.12
1981 2343 2.105821 TGTCCAAACTGACCTACCCAAG 59.894 50.000 0.00 0.00 34.25 3.61
1991 2353 3.082619 CTACCCAAGGACACCTCCA 57.917 57.895 0.00 0.00 39.39 3.86
1992 2354 0.905357 CTACCCAAGGACACCTCCAG 59.095 60.000 0.00 0.00 39.39 3.86
1993 2355 0.490017 TACCCAAGGACACCTCCAGA 59.510 55.000 0.00 0.00 39.39 3.86
1994 2356 0.401395 ACCCAAGGACACCTCCAGAA 60.401 55.000 0.00 0.00 39.39 3.02
1995 2357 0.326264 CCCAAGGACACCTCCAGAAG 59.674 60.000 0.00 0.00 39.39 2.85
1996 2358 1.352083 CCAAGGACACCTCCAGAAGA 58.648 55.000 0.00 0.00 39.39 2.87
1997 2359 1.699634 CCAAGGACACCTCCAGAAGAA 59.300 52.381 0.00 0.00 39.39 2.52
1998 2360 2.106511 CCAAGGACACCTCCAGAAGAAA 59.893 50.000 0.00 0.00 39.39 2.52
1999 2361 3.245052 CCAAGGACACCTCCAGAAGAAAT 60.245 47.826 0.00 0.00 39.39 2.17
2000 2362 3.990959 AGGACACCTCCAGAAGAAATC 57.009 47.619 0.00 0.00 39.39 2.17
2001 2363 3.251484 AGGACACCTCCAGAAGAAATCA 58.749 45.455 0.00 0.00 39.39 2.57
2002 2364 3.008485 AGGACACCTCCAGAAGAAATCAC 59.992 47.826 0.00 0.00 39.39 3.06
2003 2365 3.244561 GGACACCTCCAGAAGAAATCACA 60.245 47.826 0.00 0.00 36.42 3.58
2004 2366 4.566488 GGACACCTCCAGAAGAAATCACAT 60.566 45.833 0.00 0.00 36.42 3.21
2005 2367 4.990526 ACACCTCCAGAAGAAATCACATT 58.009 39.130 0.00 0.00 0.00 2.71
2006 2368 5.388654 ACACCTCCAGAAGAAATCACATTT 58.611 37.500 0.00 0.00 34.64 2.32
2007 2369 5.835280 ACACCTCCAGAAGAAATCACATTTT 59.165 36.000 0.00 0.00 31.47 1.82
2008 2370 7.004086 ACACCTCCAGAAGAAATCACATTTTA 58.996 34.615 0.00 0.00 31.47 1.52
2009 2371 7.505585 ACACCTCCAGAAGAAATCACATTTTAA 59.494 33.333 0.00 0.00 31.47 1.52
2010 2372 8.526147 CACCTCCAGAAGAAATCACATTTTAAT 58.474 33.333 0.00 0.00 31.47 1.40
2011 2373 8.743714 ACCTCCAGAAGAAATCACATTTTAATC 58.256 33.333 0.00 0.00 31.47 1.75
2012 2374 7.912250 CCTCCAGAAGAAATCACATTTTAATCG 59.088 37.037 0.00 0.00 31.47 3.34
2013 2375 8.560355 TCCAGAAGAAATCACATTTTAATCGA 57.440 30.769 0.00 0.00 31.47 3.59
2014 2376 8.450964 TCCAGAAGAAATCACATTTTAATCGAC 58.549 33.333 0.00 0.00 31.47 4.20
2015 2377 8.454106 CCAGAAGAAATCACATTTTAATCGACT 58.546 33.333 0.00 0.00 31.47 4.18
2016 2378 9.831737 CAGAAGAAATCACATTTTAATCGACTT 57.168 29.630 0.00 0.00 31.47 3.01
2017 2379 9.831737 AGAAGAAATCACATTTTAATCGACTTG 57.168 29.630 0.00 0.00 31.47 3.16
2018 2380 8.970691 AAGAAATCACATTTTAATCGACTTGG 57.029 30.769 0.00 0.00 31.47 3.61
2019 2381 7.029563 AGAAATCACATTTTAATCGACTTGGC 58.970 34.615 0.00 0.00 31.47 4.52
2020 2382 4.335082 TCACATTTTAATCGACTTGGCG 57.665 40.909 0.00 0.00 0.00 5.69
2021 2383 3.126171 TCACATTTTAATCGACTTGGCGG 59.874 43.478 0.00 0.00 0.00 6.13
2022 2384 3.078837 ACATTTTAATCGACTTGGCGGT 58.921 40.909 0.00 0.00 0.00 5.68
2023 2385 3.119990 ACATTTTAATCGACTTGGCGGTG 60.120 43.478 0.00 0.00 0.00 4.94
2024 2386 2.172851 TTTAATCGACTTGGCGGTGT 57.827 45.000 0.00 0.00 0.00 4.16
2025 2387 2.172851 TTAATCGACTTGGCGGTGTT 57.827 45.000 0.00 0.00 0.00 3.32
2026 2388 2.172851 TAATCGACTTGGCGGTGTTT 57.827 45.000 0.00 0.00 0.00 2.83
2027 2389 0.872388 AATCGACTTGGCGGTGTTTC 59.128 50.000 0.00 0.00 0.00 2.78
2028 2390 0.250124 ATCGACTTGGCGGTGTTTCA 60.250 50.000 0.00 0.00 0.00 2.69
2029 2391 1.155424 TCGACTTGGCGGTGTTTCAC 61.155 55.000 0.00 0.00 0.00 3.18
2030 2392 1.157870 CGACTTGGCGGTGTTTCACT 61.158 55.000 0.06 0.00 34.40 3.41
2031 2393 0.586802 GACTTGGCGGTGTTTCACTC 59.413 55.000 0.06 0.00 34.40 3.51
2032 2394 1.157870 ACTTGGCGGTGTTTCACTCG 61.158 55.000 0.06 3.80 34.40 4.18
2033 2395 0.878523 CTTGGCGGTGTTTCACTCGA 60.879 55.000 12.23 0.00 34.40 4.04
2034 2396 1.155424 TTGGCGGTGTTTCACTCGAC 61.155 55.000 12.23 10.51 36.88 4.20
2035 2397 2.654912 GGCGGTGTTTCACTCGACG 61.655 63.158 12.23 0.00 34.40 5.12
2036 2398 2.654912 GCGGTGTTTCACTCGACGG 61.655 63.158 12.23 0.00 34.40 4.79
2037 2399 1.008194 CGGTGTTTCACTCGACGGA 60.008 57.895 0.00 0.00 34.40 4.69
2038 2400 1.273455 CGGTGTTTCACTCGACGGAC 61.273 60.000 0.00 0.00 34.40 4.79
2039 2401 0.031721 GGTGTTTCACTCGACGGACT 59.968 55.000 0.00 0.00 34.40 3.85
2040 2402 1.406447 GTGTTTCACTCGACGGACTC 58.594 55.000 0.00 0.00 0.00 3.36
2041 2403 0.040692 TGTTTCACTCGACGGACTCG 60.041 55.000 0.00 0.00 44.44 4.18
2048 2410 4.436653 CGACGGACTCGAAGACAC 57.563 61.111 0.00 0.00 46.14 3.67
2049 2411 1.867615 CGACGGACTCGAAGACACT 59.132 57.895 0.00 0.00 46.14 3.55
2050 2412 0.179220 CGACGGACTCGAAGACACTC 60.179 60.000 0.00 0.00 46.14 3.51
2051 2413 0.179220 GACGGACTCGAAGACACTCG 60.179 60.000 0.00 0.00 40.11 4.18
2052 2414 0.602106 ACGGACTCGAAGACACTCGA 60.602 55.000 0.00 0.00 45.22 4.04
2053 2415 0.727970 CGGACTCGAAGACACTCGAT 59.272 55.000 0.00 0.00 46.14 3.59
2054 2416 1.267632 CGGACTCGAAGACACTCGATC 60.268 57.143 0.00 0.00 46.14 3.69
2055 2417 1.738350 GGACTCGAAGACACTCGATCA 59.262 52.381 0.00 0.00 46.14 2.92
2056 2418 2.161808 GGACTCGAAGACACTCGATCAA 59.838 50.000 0.00 0.00 46.14 2.57
2057 2419 3.421741 GACTCGAAGACACTCGATCAAG 58.578 50.000 0.00 0.00 46.14 3.02
2058 2420 3.075148 ACTCGAAGACACTCGATCAAGA 58.925 45.455 0.00 0.00 46.14 3.02
2059 2421 3.502595 ACTCGAAGACACTCGATCAAGAA 59.497 43.478 0.00 0.00 46.14 2.52
2060 2422 4.084889 TCGAAGACACTCGATCAAGAAG 57.915 45.455 0.00 0.00 42.69 2.85
2061 2423 2.596419 CGAAGACACTCGATCAAGAAGC 59.404 50.000 0.00 0.00 41.44 3.86
2062 2424 3.579709 GAAGACACTCGATCAAGAAGCA 58.420 45.455 0.00 0.00 0.00 3.91
2063 2425 3.667497 AGACACTCGATCAAGAAGCAA 57.333 42.857 0.00 0.00 0.00 3.91
2064 2426 3.321497 AGACACTCGATCAAGAAGCAAC 58.679 45.455 0.00 0.00 0.00 4.17
2065 2427 2.413453 GACACTCGATCAAGAAGCAACC 59.587 50.000 0.00 0.00 0.00 3.77
2066 2428 2.224281 ACACTCGATCAAGAAGCAACCA 60.224 45.455 0.00 0.00 0.00 3.67
2067 2429 2.158449 CACTCGATCAAGAAGCAACCAC 59.842 50.000 0.00 0.00 0.00 4.16
2068 2430 2.037772 ACTCGATCAAGAAGCAACCACT 59.962 45.455 0.00 0.00 0.00 4.00
2069 2431 2.670414 CTCGATCAAGAAGCAACCACTC 59.330 50.000 0.00 0.00 0.00 3.51
2070 2432 1.391485 CGATCAAGAAGCAACCACTCG 59.609 52.381 0.00 0.00 0.00 4.18
2071 2433 2.688507 GATCAAGAAGCAACCACTCGA 58.311 47.619 0.00 0.00 0.00 4.04
2072 2434 1.865865 TCAAGAAGCAACCACTCGAC 58.134 50.000 0.00 0.00 0.00 4.20
2073 2435 0.868406 CAAGAAGCAACCACTCGACC 59.132 55.000 0.00 0.00 0.00 4.79
2074 2436 0.468226 AAGAAGCAACCACTCGACCA 59.532 50.000 0.00 0.00 0.00 4.02
2075 2437 0.468226 AGAAGCAACCACTCGACCAA 59.532 50.000 0.00 0.00 0.00 3.67
2076 2438 0.868406 GAAGCAACCACTCGACCAAG 59.132 55.000 0.00 0.00 0.00 3.61
2077 2439 0.468226 AAGCAACCACTCGACCAAGA 59.532 50.000 0.00 0.00 0.00 3.02
2078 2440 0.687354 AGCAACCACTCGACCAAGAT 59.313 50.000 0.00 0.00 0.00 2.40
2079 2441 1.079503 GCAACCACTCGACCAAGATC 58.920 55.000 0.00 0.00 0.00 2.75
2080 2442 1.726853 CAACCACTCGACCAAGATCC 58.273 55.000 0.00 0.00 0.00 3.36
2081 2443 1.001974 CAACCACTCGACCAAGATCCA 59.998 52.381 0.00 0.00 0.00 3.41
2082 2444 1.348064 ACCACTCGACCAAGATCCAA 58.652 50.000 0.00 0.00 0.00 3.53
2083 2445 1.002087 ACCACTCGACCAAGATCCAAC 59.998 52.381 0.00 0.00 0.00 3.77
2084 2446 1.676014 CCACTCGACCAAGATCCAACC 60.676 57.143 0.00 0.00 0.00 3.77
2085 2447 1.001974 CACTCGACCAAGATCCAACCA 59.998 52.381 0.00 0.00 0.00 3.67
2086 2448 1.002087 ACTCGACCAAGATCCAACCAC 59.998 52.381 0.00 0.00 0.00 4.16
2087 2449 0.323629 TCGACCAAGATCCAACCACC 59.676 55.000 0.00 0.00 0.00 4.61
2088 2450 0.676782 CGACCAAGATCCAACCACCC 60.677 60.000 0.00 0.00 0.00 4.61
2089 2451 0.676782 GACCAAGATCCAACCACCCG 60.677 60.000 0.00 0.00 0.00 5.28
2090 2452 1.131303 ACCAAGATCCAACCACCCGA 61.131 55.000 0.00 0.00 0.00 5.14
2091 2453 0.676782 CCAAGATCCAACCACCCGAC 60.677 60.000 0.00 0.00 0.00 4.79
2092 2454 1.019278 CAAGATCCAACCACCCGACG 61.019 60.000 0.00 0.00 0.00 5.12
2093 2455 2.125269 GATCCAACCACCCGACGG 60.125 66.667 6.99 6.99 0.00 4.79
2094 2456 4.404098 ATCCAACCACCCGACGGC 62.404 66.667 8.86 0.00 0.00 5.68
2105 2467 2.439701 CGACGGCCAGGAGACCTA 60.440 66.667 2.24 0.00 29.64 3.08
2106 2468 2.050350 CGACGGCCAGGAGACCTAA 61.050 63.158 2.24 0.00 29.64 2.69
2107 2469 1.601419 CGACGGCCAGGAGACCTAAA 61.601 60.000 2.24 0.00 29.64 1.85
2108 2470 0.175989 GACGGCCAGGAGACCTAAAG 59.824 60.000 2.24 0.00 29.64 1.85
2109 2471 0.544595 ACGGCCAGGAGACCTAAAGT 60.545 55.000 2.24 0.00 29.64 2.66
2110 2472 0.175989 CGGCCAGGAGACCTAAAGTC 59.824 60.000 2.24 0.00 46.71 3.01
2119 2481 1.711206 GACCTAAAGTCACTCCGCAC 58.289 55.000 0.00 0.00 45.55 5.34
2120 2482 0.038526 ACCTAAAGTCACTCCGCACG 60.039 55.000 0.00 0.00 0.00 5.34
2121 2483 1.352156 CCTAAAGTCACTCCGCACGC 61.352 60.000 0.00 0.00 0.00 5.34
2122 2484 0.388649 CTAAAGTCACTCCGCACGCT 60.389 55.000 0.00 0.00 0.00 5.07
2123 2485 0.883153 TAAAGTCACTCCGCACGCTA 59.117 50.000 0.00 0.00 0.00 4.26
2124 2486 0.032952 AAAGTCACTCCGCACGCTAA 59.967 50.000 0.00 0.00 0.00 3.09
2125 2487 0.666577 AAGTCACTCCGCACGCTAAC 60.667 55.000 0.00 0.00 0.00 2.34
2133 2495 3.177249 GCACGCTAACGGTCGGTC 61.177 66.667 0.00 0.00 46.04 4.79
2134 2496 2.256158 CACGCTAACGGTCGGTCA 59.744 61.111 0.00 0.00 46.04 4.02
2135 2497 1.153901 CACGCTAACGGTCGGTCAT 60.154 57.895 0.00 0.00 46.04 3.06
2136 2498 0.734942 CACGCTAACGGTCGGTCATT 60.735 55.000 0.00 0.00 46.04 2.57
2137 2499 0.810648 ACGCTAACGGTCGGTCATTA 59.189 50.000 0.00 0.00 46.04 1.90
2138 2500 1.202114 ACGCTAACGGTCGGTCATTAA 59.798 47.619 0.00 0.00 46.04 1.40
2139 2501 1.850441 CGCTAACGGTCGGTCATTAAG 59.150 52.381 0.00 0.00 34.97 1.85
2140 2502 2.733227 CGCTAACGGTCGGTCATTAAGT 60.733 50.000 0.00 0.00 34.97 2.24
2141 2503 3.487376 CGCTAACGGTCGGTCATTAAGTA 60.487 47.826 0.00 0.00 34.97 2.24
2142 2504 4.040376 GCTAACGGTCGGTCATTAAGTAG 58.960 47.826 0.00 0.00 0.00 2.57
2143 2505 2.573941 ACGGTCGGTCATTAAGTAGC 57.426 50.000 0.00 0.00 0.00 3.58
2144 2506 2.097825 ACGGTCGGTCATTAAGTAGCT 58.902 47.619 0.00 0.00 0.00 3.32
2145 2507 2.494870 ACGGTCGGTCATTAAGTAGCTT 59.505 45.455 0.00 0.00 0.00 3.74
2146 2508 3.056322 ACGGTCGGTCATTAAGTAGCTTT 60.056 43.478 0.00 0.00 0.00 3.51
2147 2509 3.930848 CGGTCGGTCATTAAGTAGCTTTT 59.069 43.478 0.00 0.00 0.00 2.27
2148 2510 5.104374 CGGTCGGTCATTAAGTAGCTTTTA 58.896 41.667 0.00 0.00 0.00 1.52
2149 2511 5.751990 CGGTCGGTCATTAAGTAGCTTTTAT 59.248 40.000 0.00 0.00 0.00 1.40
2150 2512 6.292168 CGGTCGGTCATTAAGTAGCTTTTATG 60.292 42.308 0.00 0.00 0.00 1.90
2151 2513 6.018180 GGTCGGTCATTAAGTAGCTTTTATGG 60.018 42.308 0.00 0.00 0.00 2.74
2152 2514 6.537660 GTCGGTCATTAAGTAGCTTTTATGGT 59.462 38.462 0.00 0.00 0.00 3.55
2153 2515 6.759827 TCGGTCATTAAGTAGCTTTTATGGTC 59.240 38.462 0.00 0.00 0.00 4.02
2154 2516 6.537301 CGGTCATTAAGTAGCTTTTATGGTCA 59.463 38.462 0.00 0.00 0.00 4.02
2155 2517 7.226720 CGGTCATTAAGTAGCTTTTATGGTCAT 59.773 37.037 0.00 0.00 0.00 3.06
2156 2518 8.560374 GGTCATTAAGTAGCTTTTATGGTCATC 58.440 37.037 0.00 0.00 0.00 2.92
2157 2519 9.109393 GTCATTAAGTAGCTTTTATGGTCATCA 57.891 33.333 0.00 0.00 0.00 3.07
2158 2520 9.851686 TCATTAAGTAGCTTTTATGGTCATCAT 57.148 29.630 0.00 0.00 39.78 2.45
2161 2523 7.736447 AAGTAGCTTTTATGGTCATCATAGC 57.264 36.000 0.00 0.00 39.29 2.97
2162 2524 6.830912 AGTAGCTTTTATGGTCATCATAGCA 58.169 36.000 0.00 0.00 39.29 3.49
2163 2525 6.708054 AGTAGCTTTTATGGTCATCATAGCAC 59.292 38.462 0.00 6.36 39.29 4.40
2164 2526 5.688807 AGCTTTTATGGTCATCATAGCACT 58.311 37.500 9.16 0.00 39.29 4.40
2165 2527 6.125029 AGCTTTTATGGTCATCATAGCACTT 58.875 36.000 9.16 0.00 39.29 3.16
2166 2528 6.604795 AGCTTTTATGGTCATCATAGCACTTT 59.395 34.615 9.16 0.00 39.29 2.66
2167 2529 7.775093 AGCTTTTATGGTCATCATAGCACTTTA 59.225 33.333 9.16 0.00 39.29 1.85
2168 2530 8.571336 GCTTTTATGGTCATCATAGCACTTTAT 58.429 33.333 0.00 0.00 39.29 1.40
2172 2534 9.725019 TTATGGTCATCATAGCACTTTATTAGG 57.275 33.333 0.00 0.00 39.29 2.69
2173 2535 6.533730 TGGTCATCATAGCACTTTATTAGGG 58.466 40.000 0.00 0.00 0.00 3.53
2174 2536 5.940470 GGTCATCATAGCACTTTATTAGGGG 59.060 44.000 0.00 0.00 0.00 4.79
2175 2537 5.412904 GTCATCATAGCACTTTATTAGGGGC 59.587 44.000 0.00 0.00 0.00 5.80
2176 2538 4.002906 TCATAGCACTTTATTAGGGGCG 57.997 45.455 0.00 0.00 34.57 6.13
2177 2539 3.389983 TCATAGCACTTTATTAGGGGCGT 59.610 43.478 0.00 0.00 34.57 5.68
2178 2540 2.801077 AGCACTTTATTAGGGGCGTT 57.199 45.000 0.00 0.00 34.57 4.84
2179 2541 3.918294 AGCACTTTATTAGGGGCGTTA 57.082 42.857 0.00 0.00 34.57 3.18
2180 2542 3.538591 AGCACTTTATTAGGGGCGTTAC 58.461 45.455 0.00 0.00 34.57 2.50
2181 2543 2.615447 GCACTTTATTAGGGGCGTTACC 59.385 50.000 0.00 0.00 37.93 2.85
2182 2544 3.876341 CACTTTATTAGGGGCGTTACCA 58.124 45.455 0.00 0.00 42.05 3.25
2183 2545 3.875134 CACTTTATTAGGGGCGTTACCAG 59.125 47.826 0.00 0.00 42.05 4.00
2184 2546 3.520721 ACTTTATTAGGGGCGTTACCAGT 59.479 43.478 0.00 0.00 42.05 4.00
2185 2547 4.716287 ACTTTATTAGGGGCGTTACCAGTA 59.284 41.667 0.00 0.00 42.05 2.74
2186 2548 5.189539 ACTTTATTAGGGGCGTTACCAGTAA 59.810 40.000 0.00 0.00 42.05 2.24
2187 2549 3.548745 ATTAGGGGCGTTACCAGTAAC 57.451 47.619 10.09 10.09 42.05 2.50
2194 2556 2.741930 GTTACCAGTAACGCCCGAC 58.258 57.895 5.02 0.00 36.47 4.79
2195 2557 0.737367 GTTACCAGTAACGCCCGACC 60.737 60.000 5.02 0.00 36.47 4.79
2196 2558 0.899717 TTACCAGTAACGCCCGACCT 60.900 55.000 0.00 0.00 0.00 3.85
2197 2559 0.899717 TACCAGTAACGCCCGACCTT 60.900 55.000 0.00 0.00 0.00 3.50
2198 2560 0.899717 ACCAGTAACGCCCGACCTTA 60.900 55.000 0.00 0.00 0.00 2.69
2199 2561 0.247185 CCAGTAACGCCCGACCTTAA 59.753 55.000 0.00 0.00 0.00 1.85
2200 2562 1.134610 CCAGTAACGCCCGACCTTAAT 60.135 52.381 0.00 0.00 0.00 1.40
2201 2563 1.931172 CAGTAACGCCCGACCTTAATG 59.069 52.381 0.00 0.00 0.00 1.90
2202 2564 1.551883 AGTAACGCCCGACCTTAATGT 59.448 47.619 0.00 0.00 0.00 2.71
2203 2565 2.760092 AGTAACGCCCGACCTTAATGTA 59.240 45.455 0.00 0.00 0.00 2.29
2204 2566 2.014335 AACGCCCGACCTTAATGTAC 57.986 50.000 0.00 0.00 0.00 2.90
2205 2567 1.188863 ACGCCCGACCTTAATGTACT 58.811 50.000 0.00 0.00 0.00 2.73
2206 2568 1.551883 ACGCCCGACCTTAATGTACTT 59.448 47.619 0.00 0.00 0.00 2.24
2207 2569 2.760092 ACGCCCGACCTTAATGTACTTA 59.240 45.455 0.00 0.00 0.00 2.24
2208 2570 3.195396 ACGCCCGACCTTAATGTACTTAA 59.805 43.478 0.00 0.00 0.00 1.85
2209 2571 4.183101 CGCCCGACCTTAATGTACTTAAA 58.817 43.478 0.00 0.00 0.00 1.52
2210 2572 4.630940 CGCCCGACCTTAATGTACTTAAAA 59.369 41.667 0.00 0.00 0.00 1.52
2211 2573 5.446340 CGCCCGACCTTAATGTACTTAAAAC 60.446 44.000 0.00 0.00 0.00 2.43
2212 2574 5.163723 GCCCGACCTTAATGTACTTAAAACC 60.164 44.000 0.00 0.00 0.00 3.27
2213 2575 5.355071 CCCGACCTTAATGTACTTAAAACCC 59.645 44.000 0.00 0.00 0.00 4.11
2214 2576 6.175471 CCGACCTTAATGTACTTAAAACCCT 58.825 40.000 0.00 0.00 0.00 4.34
2215 2577 6.093082 CCGACCTTAATGTACTTAAAACCCTG 59.907 42.308 0.00 0.00 0.00 4.45
2216 2578 6.402875 CGACCTTAATGTACTTAAAACCCTGC 60.403 42.308 0.00 0.00 0.00 4.85
2217 2579 6.308566 ACCTTAATGTACTTAAAACCCTGCA 58.691 36.000 0.00 0.00 0.00 4.41
2218 2580 6.951778 ACCTTAATGTACTTAAAACCCTGCAT 59.048 34.615 0.00 0.00 0.00 3.96
2219 2581 8.110908 ACCTTAATGTACTTAAAACCCTGCATA 58.889 33.333 0.00 0.00 0.00 3.14
2220 2582 8.962679 CCTTAATGTACTTAAAACCCTGCATAA 58.037 33.333 0.00 0.00 0.00 1.90
2221 2583 9.783256 CTTAATGTACTTAAAACCCTGCATAAC 57.217 33.333 0.00 0.00 0.00 1.89
2222 2584 9.523168 TTAATGTACTTAAAACCCTGCATAACT 57.477 29.630 0.00 0.00 0.00 2.24
2223 2585 6.811253 TGTACTTAAAACCCTGCATAACTG 57.189 37.500 0.00 0.00 0.00 3.16
2224 2586 6.535540 TGTACTTAAAACCCTGCATAACTGA 58.464 36.000 0.00 0.00 0.00 3.41
2225 2587 6.653320 TGTACTTAAAACCCTGCATAACTGAG 59.347 38.462 0.00 0.00 0.00 3.35
2226 2588 5.010282 ACTTAAAACCCTGCATAACTGAGG 58.990 41.667 0.00 0.00 0.00 3.86
2228 2590 4.567318 CCCTGCATAACTGAGGGC 57.433 61.111 0.00 0.00 40.22 5.19
2229 2591 1.152881 CCCTGCATAACTGAGGGCC 60.153 63.158 0.00 0.00 40.22 5.80
2230 2592 1.524621 CCTGCATAACTGAGGGCCG 60.525 63.158 0.00 0.00 0.00 6.13
2231 2593 1.524621 CTGCATAACTGAGGGCCGG 60.525 63.158 0.00 0.00 0.00 6.13
2232 2594 1.971505 CTGCATAACTGAGGGCCGGA 61.972 60.000 5.05 0.00 0.00 5.14
2233 2595 1.227674 GCATAACTGAGGGCCGGAG 60.228 63.158 5.05 0.00 0.00 4.63
2248 2610 3.462678 GAGGGGTCTGGCGGACTC 61.463 72.222 24.70 21.74 44.38 3.36
2249 2611 3.966930 GAGGGGTCTGGCGGACTCT 62.967 68.421 24.83 20.93 44.51 3.24
2250 2612 2.043248 GGGGTCTGGCGGACTCTA 60.043 66.667 24.83 0.00 44.51 2.43
2251 2613 1.457831 GGGGTCTGGCGGACTCTAT 60.458 63.158 24.83 0.00 44.51 1.98
2252 2614 0.178970 GGGGTCTGGCGGACTCTATA 60.179 60.000 24.83 0.00 44.51 1.31
2253 2615 1.550409 GGGGTCTGGCGGACTCTATAT 60.550 57.143 24.83 0.00 44.51 0.86
2254 2616 2.291411 GGGGTCTGGCGGACTCTATATA 60.291 54.545 24.83 0.00 44.51 0.86
2255 2617 3.428532 GGGTCTGGCGGACTCTATATAA 58.571 50.000 24.70 0.00 41.97 0.98
2256 2618 3.444388 GGGTCTGGCGGACTCTATATAAG 59.556 52.174 24.70 0.00 41.97 1.73
2257 2619 3.119424 GGTCTGGCGGACTCTATATAAGC 60.119 52.174 24.70 1.58 43.97 3.09
2258 2620 3.090037 TCTGGCGGACTCTATATAAGCC 58.910 50.000 0.00 0.00 43.05 4.35
2260 2622 2.561419 TGGCGGACTCTATATAAGCCAC 59.439 50.000 1.80 0.00 46.73 5.01
2261 2623 2.094130 GGCGGACTCTATATAAGCCACC 60.094 54.545 0.00 0.00 42.37 4.61
2262 2624 2.094130 GCGGACTCTATATAAGCCACCC 60.094 54.545 0.00 0.00 0.00 4.61
2263 2625 3.432378 CGGACTCTATATAAGCCACCCT 58.568 50.000 0.00 0.00 0.00 4.34
2264 2626 3.444388 CGGACTCTATATAAGCCACCCTC 59.556 52.174 0.00 0.00 0.00 4.30
2265 2627 4.679331 GGACTCTATATAAGCCACCCTCT 58.321 47.826 0.00 0.00 0.00 3.69
2266 2628 4.707934 GGACTCTATATAAGCCACCCTCTC 59.292 50.000 0.00 0.00 0.00 3.20
2267 2629 4.679331 ACTCTATATAAGCCACCCTCTCC 58.321 47.826 0.00 0.00 0.00 3.71
2268 2630 4.358614 ACTCTATATAAGCCACCCTCTCCT 59.641 45.833 0.00 0.00 0.00 3.69
2269 2631 4.936802 TCTATATAAGCCACCCTCTCCTC 58.063 47.826 0.00 0.00 0.00 3.71
2270 2632 3.637821 ATATAAGCCACCCTCTCCTCA 57.362 47.619 0.00 0.00 0.00 3.86
2271 2633 1.799933 ATAAGCCACCCTCTCCTCAG 58.200 55.000 0.00 0.00 0.00 3.35
2272 2634 0.413832 TAAGCCACCCTCTCCTCAGT 59.586 55.000 0.00 0.00 0.00 3.41
2273 2635 1.197430 AAGCCACCCTCTCCTCAGTG 61.197 60.000 0.00 0.00 0.00 3.66
2274 2636 1.915769 GCCACCCTCTCCTCAGTGT 60.916 63.158 0.00 0.00 0.00 3.55
2275 2637 0.614979 GCCACCCTCTCCTCAGTGTA 60.615 60.000 0.00 0.00 0.00 2.90
2276 2638 1.938585 CCACCCTCTCCTCAGTGTAA 58.061 55.000 0.00 0.00 0.00 2.41
2277 2639 2.257207 CCACCCTCTCCTCAGTGTAAA 58.743 52.381 0.00 0.00 0.00 2.01
2278 2640 2.234908 CCACCCTCTCCTCAGTGTAAAG 59.765 54.545 0.00 0.00 0.00 1.85
2279 2641 2.234908 CACCCTCTCCTCAGTGTAAAGG 59.765 54.545 0.00 0.00 0.00 3.11
2280 2642 1.834263 CCCTCTCCTCAGTGTAAAGGG 59.166 57.143 0.00 0.00 36.32 3.95
2281 2643 2.541466 CCTCTCCTCAGTGTAAAGGGT 58.459 52.381 0.00 0.00 33.21 4.34
2282 2644 2.907042 CCTCTCCTCAGTGTAAAGGGTT 59.093 50.000 0.00 0.00 33.21 4.11
2283 2645 3.055747 CCTCTCCTCAGTGTAAAGGGTTC 60.056 52.174 0.00 0.00 33.21 3.62
2284 2646 2.561419 TCTCCTCAGTGTAAAGGGTTCG 59.439 50.000 0.00 0.00 33.21 3.95
2285 2647 1.001633 TCCTCAGTGTAAAGGGTTCGC 59.998 52.381 0.00 0.00 33.21 4.70
2286 2648 1.270625 CCTCAGTGTAAAGGGTTCGCA 60.271 52.381 0.00 0.00 0.00 5.10
2287 2649 1.798813 CTCAGTGTAAAGGGTTCGCAC 59.201 52.381 0.00 0.00 0.00 5.34
2288 2650 0.872388 CAGTGTAAAGGGTTCGCACC 59.128 55.000 0.00 0.00 43.37 5.01
2299 2661 3.202829 GGTTCGCACCCCTATAATTCA 57.797 47.619 0.00 0.00 37.03 2.57
2300 2662 3.751518 GGTTCGCACCCCTATAATTCAT 58.248 45.455 0.00 0.00 37.03 2.57
2301 2663 4.901868 GGTTCGCACCCCTATAATTCATA 58.098 43.478 0.00 0.00 37.03 2.15
2302 2664 4.694037 GGTTCGCACCCCTATAATTCATAC 59.306 45.833 0.00 0.00 37.03 2.39
2303 2665 5.512576 GGTTCGCACCCCTATAATTCATACT 60.513 44.000 0.00 0.00 37.03 2.12
2304 2666 5.401531 TCGCACCCCTATAATTCATACTC 57.598 43.478 0.00 0.00 0.00 2.59
2305 2667 5.084519 TCGCACCCCTATAATTCATACTCT 58.915 41.667 0.00 0.00 0.00 3.24
2306 2668 5.185249 TCGCACCCCTATAATTCATACTCTC 59.815 44.000 0.00 0.00 0.00 3.20
2307 2669 5.047306 CGCACCCCTATAATTCATACTCTCA 60.047 44.000 0.00 0.00 0.00 3.27
2308 2670 6.351371 CGCACCCCTATAATTCATACTCTCAT 60.351 42.308 0.00 0.00 0.00 2.90
2309 2671 7.147897 CGCACCCCTATAATTCATACTCTCATA 60.148 40.741 0.00 0.00 0.00 2.15
2310 2672 8.540388 GCACCCCTATAATTCATACTCTCATAA 58.460 37.037 0.00 0.00 0.00 1.90
2319 2681 7.767250 ATTCATACTCTCATAATCCAGTCGA 57.233 36.000 0.00 0.00 0.00 4.20
2320 2682 6.561737 TCATACTCTCATAATCCAGTCGAC 57.438 41.667 7.70 7.70 0.00 4.20
2321 2683 5.473846 TCATACTCTCATAATCCAGTCGACC 59.526 44.000 13.01 0.00 0.00 4.79
2322 2684 2.619177 ACTCTCATAATCCAGTCGACCG 59.381 50.000 13.01 0.70 0.00 4.79
2323 2685 1.337071 TCTCATAATCCAGTCGACCGC 59.663 52.381 13.01 0.00 0.00 5.68
2324 2686 0.387929 TCATAATCCAGTCGACCGCC 59.612 55.000 13.01 0.00 0.00 6.13
2325 2687 0.389391 CATAATCCAGTCGACCGCCT 59.611 55.000 13.01 0.00 0.00 5.52
2326 2688 0.674534 ATAATCCAGTCGACCGCCTC 59.325 55.000 13.01 0.00 0.00 4.70
2327 2689 1.389609 TAATCCAGTCGACCGCCTCC 61.390 60.000 13.01 0.00 0.00 4.30
2330 2692 4.778415 CAGTCGACCGCCTCCGTG 62.778 72.222 13.01 0.00 0.00 4.94
2339 2701 4.500116 GCCTCCGTGCTCCGAGAC 62.500 72.222 0.00 0.00 39.56 3.36
2340 2702 4.180946 CCTCCGTGCTCCGAGACG 62.181 72.222 0.00 6.51 39.56 4.18
2341 2703 3.432588 CTCCGTGCTCCGAGACGT 61.433 66.667 14.90 0.00 39.56 4.34
2342 2704 2.046988 TCCGTGCTCCGAGACGTA 60.047 61.111 14.90 2.24 39.56 3.57
2343 2705 2.037913 CTCCGTGCTCCGAGACGTAG 62.038 65.000 14.90 8.28 39.56 3.51
2344 2706 2.403987 CGTGCTCCGAGACGTAGG 59.596 66.667 0.00 0.00 39.56 3.18
2345 2707 2.799371 GTGCTCCGAGACGTAGGG 59.201 66.667 0.00 0.00 0.00 3.53
2346 2708 3.138798 TGCTCCGAGACGTAGGGC 61.139 66.667 0.00 0.00 0.00 5.19
2347 2709 2.829458 GCTCCGAGACGTAGGGCT 60.829 66.667 0.00 0.00 0.00 5.19
2348 2710 1.525535 GCTCCGAGACGTAGGGCTA 60.526 63.158 0.00 0.00 0.00 3.93
2349 2711 0.890090 GCTCCGAGACGTAGGGCTAT 60.890 60.000 0.00 0.00 0.00 2.97
2350 2712 1.606903 CTCCGAGACGTAGGGCTATT 58.393 55.000 0.00 0.00 0.00 1.73
2351 2713 2.775890 CTCCGAGACGTAGGGCTATTA 58.224 52.381 0.00 0.00 0.00 0.98
2352 2714 2.483491 CTCCGAGACGTAGGGCTATTAC 59.517 54.545 0.00 0.00 0.00 1.89
2353 2715 2.105477 TCCGAGACGTAGGGCTATTACT 59.895 50.000 0.00 0.00 0.00 2.24
2354 2716 2.883386 CCGAGACGTAGGGCTATTACTT 59.117 50.000 0.00 0.00 0.00 2.24
2355 2717 3.058363 CCGAGACGTAGGGCTATTACTTC 60.058 52.174 0.00 0.00 0.00 3.01
2356 2718 3.058363 CGAGACGTAGGGCTATTACTTCC 60.058 52.174 0.00 0.00 0.00 3.46
2357 2719 4.143543 GAGACGTAGGGCTATTACTTCCT 58.856 47.826 0.00 0.00 0.00 3.36
2358 2720 4.544683 AGACGTAGGGCTATTACTTCCTT 58.455 43.478 0.00 0.00 0.00 3.36
2359 2721 4.583907 AGACGTAGGGCTATTACTTCCTTC 59.416 45.833 0.00 0.00 0.00 3.46
2360 2722 3.317430 ACGTAGGGCTATTACTTCCTTCG 59.683 47.826 0.00 0.00 42.90 3.79
2361 2723 3.567164 CGTAGGGCTATTACTTCCTTCGA 59.433 47.826 0.00 0.00 40.83 3.71
2362 2724 4.320348 CGTAGGGCTATTACTTCCTTCGAG 60.320 50.000 0.00 0.00 40.83 4.04
2363 2725 3.912248 AGGGCTATTACTTCCTTCGAGA 58.088 45.455 0.00 0.00 0.00 4.04
2364 2726 4.287552 AGGGCTATTACTTCCTTCGAGAA 58.712 43.478 0.00 0.00 0.00 2.87
2374 2736 3.145228 CTTCGAGAAGGGCCTGAAC 57.855 57.895 6.92 1.62 34.87 3.18
2375 2737 0.610687 CTTCGAGAAGGGCCTGAACT 59.389 55.000 6.92 7.41 34.87 3.01
2376 2738 0.608640 TTCGAGAAGGGCCTGAACTC 59.391 55.000 6.92 15.44 0.00 3.01
2377 2739 1.153745 CGAGAAGGGCCTGAACTCG 60.154 63.158 29.13 29.13 42.77 4.18
2378 2740 1.878656 CGAGAAGGGCCTGAACTCGT 61.879 60.000 31.25 9.99 43.19 4.18
2379 2741 1.183549 GAGAAGGGCCTGAACTCGTA 58.816 55.000 6.92 0.00 0.00 3.43
2380 2742 1.549170 GAGAAGGGCCTGAACTCGTAA 59.451 52.381 6.92 0.00 0.00 3.18
2381 2743 1.975680 AGAAGGGCCTGAACTCGTAAA 59.024 47.619 6.92 0.00 0.00 2.01
2382 2744 2.074576 GAAGGGCCTGAACTCGTAAAC 58.925 52.381 6.92 0.00 0.00 2.01
2383 2745 0.323957 AGGGCCTGAACTCGTAAACC 59.676 55.000 4.50 0.00 0.00 3.27
2384 2746 0.323957 GGGCCTGAACTCGTAAACCT 59.676 55.000 0.84 0.00 0.00 3.50
2385 2747 1.271217 GGGCCTGAACTCGTAAACCTT 60.271 52.381 0.84 0.00 0.00 3.50
2386 2748 1.804748 GGCCTGAACTCGTAAACCTTG 59.195 52.381 0.00 0.00 0.00 3.61
2387 2749 1.197036 GCCTGAACTCGTAAACCTTGC 59.803 52.381 0.00 0.00 0.00 4.01
2388 2750 1.459592 CCTGAACTCGTAAACCTTGCG 59.540 52.381 0.00 0.00 40.22 4.85
2389 2751 2.132762 CTGAACTCGTAAACCTTGCGT 58.867 47.619 0.00 0.00 39.81 5.24
2390 2752 2.542595 CTGAACTCGTAAACCTTGCGTT 59.457 45.455 0.00 0.00 39.81 4.84
2391 2753 2.540931 TGAACTCGTAAACCTTGCGTTC 59.459 45.455 0.00 0.00 39.81 3.95
2392 2754 2.521105 ACTCGTAAACCTTGCGTTCT 57.479 45.000 0.00 0.00 39.81 3.01
2393 2755 2.830104 ACTCGTAAACCTTGCGTTCTT 58.170 42.857 0.00 0.00 39.81 2.52
2394 2756 3.981211 ACTCGTAAACCTTGCGTTCTTA 58.019 40.909 0.00 0.00 39.81 2.10
2395 2757 3.737774 ACTCGTAAACCTTGCGTTCTTAC 59.262 43.478 0.00 0.00 39.81 2.34
2396 2758 3.715495 TCGTAAACCTTGCGTTCTTACA 58.285 40.909 0.00 0.00 39.81 2.41
2397 2759 4.118410 TCGTAAACCTTGCGTTCTTACAA 58.882 39.130 0.00 0.00 39.81 2.41
2398 2760 4.025813 TCGTAAACCTTGCGTTCTTACAAC 60.026 41.667 0.00 0.00 39.81 3.32
2399 2761 4.025480 CGTAAACCTTGCGTTCTTACAACT 60.025 41.667 0.00 0.00 31.78 3.16
2400 2762 4.976224 AAACCTTGCGTTCTTACAACTT 57.024 36.364 0.00 0.00 31.78 2.66
2401 2763 4.547406 AACCTTGCGTTCTTACAACTTC 57.453 40.909 0.00 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
141 142 5.612725 AACATTCTTTGGGTCACAAACAT 57.387 34.783 0.00 0.00 43.81 2.71
222 223 5.319043 TCCCTGAGTGGTGTTTCTTAAAT 57.681 39.130 0.00 0.00 0.00 1.40
411 412 2.100087 TGGGCCGACTTTTCTTTTTGTC 59.900 45.455 0.00 0.00 0.00 3.18
465 466 3.687698 ACATTATACTTTGACACGTGGCC 59.312 43.478 21.02 11.16 0.00 5.36
847 1014 4.188462 TCTCGGTTTGTTAGCCATACATG 58.812 43.478 0.00 0.00 0.00 3.21
850 1017 6.278363 TCTTATCTCGGTTTGTTAGCCATAC 58.722 40.000 0.00 0.00 0.00 2.39
876 1043 1.599071 CATATGCAAAGGATGACGCGT 59.401 47.619 13.85 13.85 0.00 6.01
937 1104 8.371770 AGTTCGATAGCAGAAAAGGAAATATC 57.628 34.615 0.00 0.00 0.00 1.63
1705 2065 3.341043 CGCTGTTGTCGCTGCTGT 61.341 61.111 0.00 0.00 0.00 4.40
1724 2084 3.740115 AGTGTTAAAACGAGCCACTGAT 58.260 40.909 0.00 0.00 35.20 2.90
1738 2098 2.020720 CACAACCACTGCCAGTGTTAA 58.979 47.619 22.54 0.00 44.50 2.01
1745 2105 1.756172 CCCAACACAACCACTGCCA 60.756 57.895 0.00 0.00 0.00 4.92
1758 2118 4.082125 ACATTGAGATTCTGAACCCCAAC 58.918 43.478 0.00 0.00 0.00 3.77
1759 2119 4.387026 ACATTGAGATTCTGAACCCCAA 57.613 40.909 0.00 0.00 0.00 4.12
1760 2120 5.512942 TTACATTGAGATTCTGAACCCCA 57.487 39.130 0.00 0.00 0.00 4.96
1892 2254 9.936329 TGCTCTCTCTCTCTATCTATCTATCTA 57.064 37.037 0.00 0.00 0.00 1.98
1893 2255 8.700051 GTGCTCTCTCTCTCTATCTATCTATCT 58.300 40.741 0.00 0.00 0.00 1.98
1894 2256 7.649705 CGTGCTCTCTCTCTCTATCTATCTATC 59.350 44.444 0.00 0.00 0.00 2.08
1895 2257 7.492524 CGTGCTCTCTCTCTCTATCTATCTAT 58.507 42.308 0.00 0.00 0.00 1.98
1896 2258 6.627287 GCGTGCTCTCTCTCTCTATCTATCTA 60.627 46.154 0.00 0.00 0.00 1.98
1897 2259 5.724328 CGTGCTCTCTCTCTCTATCTATCT 58.276 45.833 0.00 0.00 0.00 1.98
1898 2260 4.330074 GCGTGCTCTCTCTCTCTATCTATC 59.670 50.000 0.00 0.00 0.00 2.08
1899 2261 4.253685 GCGTGCTCTCTCTCTCTATCTAT 58.746 47.826 0.00 0.00 0.00 1.98
1900 2262 3.070302 TGCGTGCTCTCTCTCTCTATCTA 59.930 47.826 0.00 0.00 0.00 1.98
1901 2263 2.158827 TGCGTGCTCTCTCTCTCTATCT 60.159 50.000 0.00 0.00 0.00 1.98
1902 2264 2.217750 TGCGTGCTCTCTCTCTCTATC 58.782 52.381 0.00 0.00 0.00 2.08
1903 2265 2.221169 CTGCGTGCTCTCTCTCTCTAT 58.779 52.381 0.00 0.00 0.00 1.98
1904 2266 1.065782 ACTGCGTGCTCTCTCTCTCTA 60.066 52.381 0.00 0.00 0.00 2.43
1905 2267 0.322456 ACTGCGTGCTCTCTCTCTCT 60.322 55.000 0.00 0.00 0.00 3.10
1906 2268 0.179166 CACTGCGTGCTCTCTCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
1907 2269 0.607762 TCACTGCGTGCTCTCTCTCT 60.608 55.000 4.15 0.00 32.98 3.10
1908 2270 0.455410 ATCACTGCGTGCTCTCTCTC 59.545 55.000 4.15 0.00 32.98 3.20
1909 2271 0.173029 CATCACTGCGTGCTCTCTCT 59.827 55.000 4.15 0.00 32.98 3.10
1910 2272 0.172127 TCATCACTGCGTGCTCTCTC 59.828 55.000 4.15 0.00 32.98 3.20
1911 2273 0.605083 TTCATCACTGCGTGCTCTCT 59.395 50.000 4.15 0.00 32.98 3.10
1912 2274 0.997932 CTTCATCACTGCGTGCTCTC 59.002 55.000 4.15 0.00 32.98 3.20
1913 2275 1.018226 GCTTCATCACTGCGTGCTCT 61.018 55.000 4.15 0.00 32.98 4.09
1914 2276 1.018226 AGCTTCATCACTGCGTGCTC 61.018 55.000 4.15 0.00 32.98 4.26
1915 2277 0.247460 TAGCTTCATCACTGCGTGCT 59.753 50.000 0.00 0.00 32.98 4.40
1916 2278 1.004185 CATAGCTTCATCACTGCGTGC 60.004 52.381 0.00 0.00 32.98 5.34
1917 2279 2.274437 ACATAGCTTCATCACTGCGTG 58.726 47.619 0.00 2.79 34.45 5.34
1918 2280 2.680312 ACATAGCTTCATCACTGCGT 57.320 45.000 0.00 0.00 0.00 5.24
1919 2281 4.554292 AGATACATAGCTTCATCACTGCG 58.446 43.478 0.00 0.00 0.00 5.18
1920 2282 6.098679 CCTAGATACATAGCTTCATCACTGC 58.901 44.000 0.00 0.00 0.00 4.40
1921 2283 6.210385 ACCCTAGATACATAGCTTCATCACTG 59.790 42.308 0.00 0.00 0.00 3.66
1922 2284 6.318913 ACCCTAGATACATAGCTTCATCACT 58.681 40.000 0.00 0.00 0.00 3.41
1923 2285 6.597832 ACCCTAGATACATAGCTTCATCAC 57.402 41.667 0.00 0.00 0.00 3.06
1924 2286 6.892456 CCTACCCTAGATACATAGCTTCATCA 59.108 42.308 0.00 0.00 0.00 3.07
1925 2287 6.322712 CCCTACCCTAGATACATAGCTTCATC 59.677 46.154 0.00 0.00 0.00 2.92
1926 2288 6.198639 CCCTACCCTAGATACATAGCTTCAT 58.801 44.000 0.00 0.00 0.00 2.57
1927 2289 5.076039 ACCCTACCCTAGATACATAGCTTCA 59.924 44.000 0.00 0.00 0.00 3.02
1928 2290 5.581975 ACCCTACCCTAGATACATAGCTTC 58.418 45.833 0.00 0.00 0.00 3.86
1929 2291 5.076039 TGACCCTACCCTAGATACATAGCTT 59.924 44.000 0.00 0.00 0.00 3.74
1930 2292 4.606697 TGACCCTACCCTAGATACATAGCT 59.393 45.833 0.00 0.00 0.00 3.32
1931 2293 4.931914 TGACCCTACCCTAGATACATAGC 58.068 47.826 0.00 0.00 0.00 2.97
1932 2294 6.732487 TCATGACCCTACCCTAGATACATAG 58.268 44.000 0.00 0.00 0.00 2.23
1933 2295 6.730001 TCATGACCCTACCCTAGATACATA 57.270 41.667 0.00 0.00 0.00 2.29
1934 2296 5.616975 TCATGACCCTACCCTAGATACAT 57.383 43.478 0.00 0.00 0.00 2.29
1935 2297 5.145564 GTTCATGACCCTACCCTAGATACA 58.854 45.833 0.00 0.00 0.00 2.29
1936 2298 4.527427 GGTTCATGACCCTACCCTAGATAC 59.473 50.000 1.23 0.00 43.06 2.24
1937 2299 4.748701 GGTTCATGACCCTACCCTAGATA 58.251 47.826 1.23 0.00 43.06 1.98
1938 2300 3.588569 GGTTCATGACCCTACCCTAGAT 58.411 50.000 1.23 0.00 43.06 1.98
1939 2301 3.042059 GGTTCATGACCCTACCCTAGA 57.958 52.381 1.23 0.00 43.06 2.43
1950 2312 3.251004 GTCAGTTTGGACAGGTTCATGAC 59.749 47.826 0.00 0.00 37.73 3.06
1951 2313 3.476552 GTCAGTTTGGACAGGTTCATGA 58.523 45.455 0.00 0.00 37.73 3.07
1952 2314 2.554032 GGTCAGTTTGGACAGGTTCATG 59.446 50.000 0.00 0.00 39.59 3.07
1953 2315 2.443255 AGGTCAGTTTGGACAGGTTCAT 59.557 45.455 0.00 0.00 39.59 2.57
1954 2316 1.843851 AGGTCAGTTTGGACAGGTTCA 59.156 47.619 0.00 0.00 39.59 3.18
1955 2317 2.640316 AGGTCAGTTTGGACAGGTTC 57.360 50.000 0.00 0.00 39.59 3.62
1956 2318 2.105993 GGTAGGTCAGTTTGGACAGGTT 59.894 50.000 0.00 0.00 39.59 3.50
1957 2319 1.697982 GGTAGGTCAGTTTGGACAGGT 59.302 52.381 0.00 0.00 39.59 4.00
1958 2320 1.003233 GGGTAGGTCAGTTTGGACAGG 59.997 57.143 0.00 0.00 39.59 4.00
1959 2321 1.697432 TGGGTAGGTCAGTTTGGACAG 59.303 52.381 0.00 0.00 39.59 3.51
1960 2322 1.809133 TGGGTAGGTCAGTTTGGACA 58.191 50.000 0.00 0.00 39.59 4.02
1961 2323 2.552373 CCTTGGGTAGGTCAGTTTGGAC 60.552 54.545 0.00 0.00 39.39 4.02
1962 2324 1.702957 CCTTGGGTAGGTCAGTTTGGA 59.297 52.381 0.00 0.00 39.39 3.53
1963 2325 1.702957 TCCTTGGGTAGGTCAGTTTGG 59.297 52.381 0.00 0.00 45.03 3.28
1964 2326 2.105821 TGTCCTTGGGTAGGTCAGTTTG 59.894 50.000 0.00 0.00 45.03 2.93
1965 2327 2.105993 GTGTCCTTGGGTAGGTCAGTTT 59.894 50.000 0.00 0.00 41.77 2.66
1966 2328 1.697982 GTGTCCTTGGGTAGGTCAGTT 59.302 52.381 0.00 0.00 41.77 3.16
1967 2329 1.349067 GTGTCCTTGGGTAGGTCAGT 58.651 55.000 0.00 0.00 41.77 3.41
1968 2330 0.613777 GGTGTCCTTGGGTAGGTCAG 59.386 60.000 0.00 0.00 41.77 3.51
1969 2331 0.192566 AGGTGTCCTTGGGTAGGTCA 59.807 55.000 0.00 0.00 45.03 4.02
1970 2332 0.903236 GAGGTGTCCTTGGGTAGGTC 59.097 60.000 0.00 0.00 45.03 3.85
1971 2333 0.546988 GGAGGTGTCCTTGGGTAGGT 60.547 60.000 0.00 0.00 45.03 3.08
1972 2334 0.546747 TGGAGGTGTCCTTGGGTAGG 60.547 60.000 0.00 0.00 44.30 3.18
1973 2335 0.905357 CTGGAGGTGTCCTTGGGTAG 59.095 60.000 0.00 0.00 44.30 3.18
1974 2336 0.490017 TCTGGAGGTGTCCTTGGGTA 59.510 55.000 0.00 0.00 44.30 3.69
1975 2337 0.401395 TTCTGGAGGTGTCCTTGGGT 60.401 55.000 0.00 0.00 44.30 4.51
1976 2338 0.326264 CTTCTGGAGGTGTCCTTGGG 59.674 60.000 0.00 0.00 44.30 4.12
1977 2339 1.352083 TCTTCTGGAGGTGTCCTTGG 58.648 55.000 0.00 0.00 44.30 3.61
1978 2340 3.492102 TTTCTTCTGGAGGTGTCCTTG 57.508 47.619 0.00 0.00 44.30 3.61
1979 2341 3.652869 TGATTTCTTCTGGAGGTGTCCTT 59.347 43.478 0.00 0.00 44.30 3.36
1980 2342 3.008485 GTGATTTCTTCTGGAGGTGTCCT 59.992 47.826 0.00 0.00 44.30 3.85
1981 2343 3.244561 TGTGATTTCTTCTGGAGGTGTCC 60.245 47.826 0.00 0.00 44.24 4.02
1982 2344 4.008074 TGTGATTTCTTCTGGAGGTGTC 57.992 45.455 0.00 0.00 0.00 3.67
1983 2345 4.647564 ATGTGATTTCTTCTGGAGGTGT 57.352 40.909 0.00 0.00 0.00 4.16
1984 2346 5.972107 AAATGTGATTTCTTCTGGAGGTG 57.028 39.130 0.00 0.00 0.00 4.00
1985 2347 8.655935 ATTAAAATGTGATTTCTTCTGGAGGT 57.344 30.769 0.00 0.00 0.00 3.85
1986 2348 7.912250 CGATTAAAATGTGATTTCTTCTGGAGG 59.088 37.037 0.00 0.00 0.00 4.30
1987 2349 8.668353 TCGATTAAAATGTGATTTCTTCTGGAG 58.332 33.333 0.00 0.00 0.00 3.86
1988 2350 8.450964 GTCGATTAAAATGTGATTTCTTCTGGA 58.549 33.333 0.00 0.00 0.00 3.86
1989 2351 8.454106 AGTCGATTAAAATGTGATTTCTTCTGG 58.546 33.333 0.00 0.00 0.00 3.86
1990 2352 9.831737 AAGTCGATTAAAATGTGATTTCTTCTG 57.168 29.630 0.00 0.00 0.00 3.02
1991 2353 9.831737 CAAGTCGATTAAAATGTGATTTCTTCT 57.168 29.630 0.00 0.00 0.00 2.85
1992 2354 9.065871 CCAAGTCGATTAAAATGTGATTTCTTC 57.934 33.333 0.00 0.00 0.00 2.87
1993 2355 7.542130 GCCAAGTCGATTAAAATGTGATTTCTT 59.458 33.333 0.00 0.00 0.00 2.52
1994 2356 7.029563 GCCAAGTCGATTAAAATGTGATTTCT 58.970 34.615 0.00 0.00 0.00 2.52
1995 2357 6.021468 CGCCAAGTCGATTAAAATGTGATTTC 60.021 38.462 0.00 0.00 0.00 2.17
1996 2358 5.799936 CGCCAAGTCGATTAAAATGTGATTT 59.200 36.000 0.00 0.00 0.00 2.17
1997 2359 5.331902 CGCCAAGTCGATTAAAATGTGATT 58.668 37.500 0.00 0.00 0.00 2.57
1998 2360 4.201910 CCGCCAAGTCGATTAAAATGTGAT 60.202 41.667 0.00 0.00 0.00 3.06
1999 2361 3.126171 CCGCCAAGTCGATTAAAATGTGA 59.874 43.478 0.00 0.00 0.00 3.58
2000 2362 3.119990 ACCGCCAAGTCGATTAAAATGTG 60.120 43.478 0.00 0.00 0.00 3.21
2001 2363 3.078837 ACCGCCAAGTCGATTAAAATGT 58.921 40.909 0.00 0.00 0.00 2.71
2002 2364 3.119990 ACACCGCCAAGTCGATTAAAATG 60.120 43.478 0.00 0.00 0.00 2.32
2003 2365 3.078837 ACACCGCCAAGTCGATTAAAAT 58.921 40.909 0.00 0.00 0.00 1.82
2004 2366 2.496111 ACACCGCCAAGTCGATTAAAA 58.504 42.857 0.00 0.00 0.00 1.52
2005 2367 2.172851 ACACCGCCAAGTCGATTAAA 57.827 45.000 0.00 0.00 0.00 1.52
2006 2368 2.172851 AACACCGCCAAGTCGATTAA 57.827 45.000 0.00 0.00 0.00 1.40
2007 2369 2.070783 GAAACACCGCCAAGTCGATTA 58.929 47.619 0.00 0.00 0.00 1.75
2008 2370 0.872388 GAAACACCGCCAAGTCGATT 59.128 50.000 0.00 0.00 0.00 3.34
2009 2371 0.250124 TGAAACACCGCCAAGTCGAT 60.250 50.000 0.00 0.00 0.00 3.59
2010 2372 1.144276 TGAAACACCGCCAAGTCGA 59.856 52.632 0.00 0.00 0.00 4.20
2011 2373 1.157870 AGTGAAACACCGCCAAGTCG 61.158 55.000 0.00 0.00 41.43 4.18
2012 2374 0.586802 GAGTGAAACACCGCCAAGTC 59.413 55.000 0.00 0.00 41.43 3.01
2013 2375 1.157870 CGAGTGAAACACCGCCAAGT 61.158 55.000 0.00 0.00 41.43 3.16
2014 2376 0.878523 TCGAGTGAAACACCGCCAAG 60.879 55.000 0.00 0.00 41.43 3.61
2015 2377 1.144276 TCGAGTGAAACACCGCCAA 59.856 52.632 0.00 0.00 41.43 4.52
2016 2378 1.593209 GTCGAGTGAAACACCGCCA 60.593 57.895 0.00 0.00 41.43 5.69
2017 2379 2.654912 CGTCGAGTGAAACACCGCC 61.655 63.158 0.00 0.00 41.43 6.13
2018 2380 2.654912 CCGTCGAGTGAAACACCGC 61.655 63.158 0.00 0.00 41.43 5.68
2019 2381 1.008194 TCCGTCGAGTGAAACACCG 60.008 57.895 0.00 0.00 41.43 4.94
2020 2382 0.031721 AGTCCGTCGAGTGAAACACC 59.968 55.000 0.00 0.00 41.43 4.16
2021 2383 1.406447 GAGTCCGTCGAGTGAAACAC 58.594 55.000 0.00 0.00 41.43 3.32
2022 2384 3.859650 GAGTCCGTCGAGTGAAACA 57.140 52.632 0.00 0.00 41.43 2.83
2032 2394 0.179220 CGAGTGTCTTCGAGTCCGTC 60.179 60.000 0.00 0.00 43.03 4.79
2033 2395 0.602106 TCGAGTGTCTTCGAGTCCGT 60.602 55.000 0.00 0.00 44.00 4.69
2034 2396 2.160063 TCGAGTGTCTTCGAGTCCG 58.840 57.895 0.00 0.00 44.00 4.79
2040 2402 2.596419 GCTTCTTGATCGAGTGTCTTCG 59.404 50.000 9.87 0.00 41.79 3.79
2041 2403 3.579709 TGCTTCTTGATCGAGTGTCTTC 58.420 45.455 9.87 0.00 0.00 2.87
2042 2404 3.667497 TGCTTCTTGATCGAGTGTCTT 57.333 42.857 9.87 0.00 0.00 3.01
2043 2405 3.321497 GTTGCTTCTTGATCGAGTGTCT 58.679 45.455 9.87 0.00 0.00 3.41
2044 2406 2.413453 GGTTGCTTCTTGATCGAGTGTC 59.587 50.000 9.87 1.36 0.00 3.67
2045 2407 2.224281 TGGTTGCTTCTTGATCGAGTGT 60.224 45.455 9.87 0.00 0.00 3.55
2046 2408 2.158449 GTGGTTGCTTCTTGATCGAGTG 59.842 50.000 9.87 5.75 0.00 3.51
2047 2409 2.037772 AGTGGTTGCTTCTTGATCGAGT 59.962 45.455 9.87 0.00 0.00 4.18
2048 2410 2.670414 GAGTGGTTGCTTCTTGATCGAG 59.330 50.000 3.24 3.24 0.00 4.04
2049 2411 2.688507 GAGTGGTTGCTTCTTGATCGA 58.311 47.619 0.00 0.00 0.00 3.59
2050 2412 1.391485 CGAGTGGTTGCTTCTTGATCG 59.609 52.381 0.00 0.00 0.00 3.69
2051 2413 2.413453 GTCGAGTGGTTGCTTCTTGATC 59.587 50.000 0.00 0.00 0.00 2.92
2052 2414 2.417719 GTCGAGTGGTTGCTTCTTGAT 58.582 47.619 0.00 0.00 0.00 2.57
2053 2415 1.540363 GGTCGAGTGGTTGCTTCTTGA 60.540 52.381 0.00 0.00 0.00 3.02
2054 2416 0.868406 GGTCGAGTGGTTGCTTCTTG 59.132 55.000 0.00 0.00 0.00 3.02
2055 2417 0.468226 TGGTCGAGTGGTTGCTTCTT 59.532 50.000 0.00 0.00 0.00 2.52
2056 2418 0.468226 TTGGTCGAGTGGTTGCTTCT 59.532 50.000 0.00 0.00 0.00 2.85
2057 2419 0.868406 CTTGGTCGAGTGGTTGCTTC 59.132 55.000 0.00 0.00 0.00 3.86
2058 2420 0.468226 TCTTGGTCGAGTGGTTGCTT 59.532 50.000 0.00 0.00 0.00 3.91
2059 2421 0.687354 ATCTTGGTCGAGTGGTTGCT 59.313 50.000 0.00 0.00 0.00 3.91
2060 2422 1.079503 GATCTTGGTCGAGTGGTTGC 58.920 55.000 0.00 0.00 0.00 4.17
2061 2423 1.001974 TGGATCTTGGTCGAGTGGTTG 59.998 52.381 0.00 0.00 0.00 3.77
2062 2424 1.348064 TGGATCTTGGTCGAGTGGTT 58.652 50.000 0.00 0.00 0.00 3.67
2063 2425 1.002087 GTTGGATCTTGGTCGAGTGGT 59.998 52.381 0.00 0.00 0.00 4.16
2064 2426 1.676014 GGTTGGATCTTGGTCGAGTGG 60.676 57.143 0.00 0.00 0.00 4.00
2065 2427 1.001974 TGGTTGGATCTTGGTCGAGTG 59.998 52.381 0.00 0.00 0.00 3.51
2066 2428 1.002087 GTGGTTGGATCTTGGTCGAGT 59.998 52.381 0.00 0.00 0.00 4.18
2067 2429 1.676014 GGTGGTTGGATCTTGGTCGAG 60.676 57.143 0.00 0.00 0.00 4.04
2068 2430 0.323629 GGTGGTTGGATCTTGGTCGA 59.676 55.000 0.00 0.00 0.00 4.20
2069 2431 0.676782 GGGTGGTTGGATCTTGGTCG 60.677 60.000 0.00 0.00 0.00 4.79
2070 2432 0.676782 CGGGTGGTTGGATCTTGGTC 60.677 60.000 0.00 0.00 0.00 4.02
2071 2433 1.131303 TCGGGTGGTTGGATCTTGGT 61.131 55.000 0.00 0.00 0.00 3.67
2072 2434 0.676782 GTCGGGTGGTTGGATCTTGG 60.677 60.000 0.00 0.00 0.00 3.61
2073 2435 1.019278 CGTCGGGTGGTTGGATCTTG 61.019 60.000 0.00 0.00 0.00 3.02
2074 2436 1.295423 CGTCGGGTGGTTGGATCTT 59.705 57.895 0.00 0.00 0.00 2.40
2075 2437 2.656069 CCGTCGGGTGGTTGGATCT 61.656 63.158 2.34 0.00 0.00 2.75
2076 2438 2.125269 CCGTCGGGTGGTTGGATC 60.125 66.667 2.34 0.00 0.00 3.36
2077 2439 4.404098 GCCGTCGGGTGGTTGGAT 62.404 66.667 14.38 0.00 34.97 3.41
2088 2450 1.601419 TTTAGGTCTCCTGGCCGTCG 61.601 60.000 0.00 0.00 34.61 5.12
2089 2451 0.175989 CTTTAGGTCTCCTGGCCGTC 59.824 60.000 0.00 0.00 34.61 4.79
2090 2452 0.544595 ACTTTAGGTCTCCTGGCCGT 60.545 55.000 0.00 0.00 34.61 5.68
2091 2453 0.175989 GACTTTAGGTCTCCTGGCCG 59.824 60.000 0.00 0.00 41.46 6.13
2092 2454 1.066071 GTGACTTTAGGTCTCCTGGCC 60.066 57.143 0.00 0.00 44.74 5.36
2093 2455 1.903183 AGTGACTTTAGGTCTCCTGGC 59.097 52.381 0.00 0.00 44.74 4.85
2094 2456 2.498078 GGAGTGACTTTAGGTCTCCTGG 59.502 54.545 0.00 0.00 44.74 4.45
2095 2457 2.164624 CGGAGTGACTTTAGGTCTCCTG 59.835 54.545 0.00 0.00 44.74 3.86
2096 2458 2.448453 CGGAGTGACTTTAGGTCTCCT 58.552 52.381 0.00 0.00 44.74 3.69
2097 2459 1.135053 GCGGAGTGACTTTAGGTCTCC 60.135 57.143 0.00 0.00 44.74 3.71
2098 2460 1.544691 TGCGGAGTGACTTTAGGTCTC 59.455 52.381 0.00 0.00 44.74 3.36
2099 2461 1.272769 GTGCGGAGTGACTTTAGGTCT 59.727 52.381 0.00 0.00 44.74 3.85
2100 2462 1.711206 GTGCGGAGTGACTTTAGGTC 58.289 55.000 0.00 0.00 44.70 3.85
2101 2463 0.038526 CGTGCGGAGTGACTTTAGGT 60.039 55.000 0.00 0.00 0.00 3.08
2102 2464 1.352156 GCGTGCGGAGTGACTTTAGG 61.352 60.000 0.00 0.00 0.00 2.69
2103 2465 0.388649 AGCGTGCGGAGTGACTTTAG 60.389 55.000 0.00 0.00 0.00 1.85
2104 2466 0.883153 TAGCGTGCGGAGTGACTTTA 59.117 50.000 0.00 0.00 0.00 1.85
2105 2467 0.032952 TTAGCGTGCGGAGTGACTTT 59.967 50.000 0.00 0.00 0.00 2.66
2106 2468 0.666577 GTTAGCGTGCGGAGTGACTT 60.667 55.000 0.00 0.00 0.00 3.01
2107 2469 1.080705 GTTAGCGTGCGGAGTGACT 60.081 57.895 0.00 0.00 0.00 3.41
2108 2470 2.434134 CGTTAGCGTGCGGAGTGAC 61.434 63.158 0.00 0.00 0.00 3.67
2109 2471 2.126618 CGTTAGCGTGCGGAGTGA 60.127 61.111 0.00 0.00 0.00 3.41
2116 2478 3.177249 GACCGACCGTTAGCGTGC 61.177 66.667 0.00 0.00 36.15 5.34
2117 2479 0.734942 AATGACCGACCGTTAGCGTG 60.735 55.000 0.00 0.00 36.15 5.34
2118 2480 0.810648 TAATGACCGACCGTTAGCGT 59.189 50.000 0.00 0.00 36.15 5.07
2119 2481 1.850441 CTTAATGACCGACCGTTAGCG 59.150 52.381 0.00 0.00 37.95 4.26
2120 2482 2.884827 ACTTAATGACCGACCGTTAGC 58.115 47.619 0.00 0.00 0.00 3.09
2121 2483 4.040376 GCTACTTAATGACCGACCGTTAG 58.960 47.826 0.00 0.00 0.00 2.34
2122 2484 3.696051 AGCTACTTAATGACCGACCGTTA 59.304 43.478 0.00 0.00 0.00 3.18
2123 2485 2.494870 AGCTACTTAATGACCGACCGTT 59.505 45.455 0.00 0.00 0.00 4.44
2124 2486 2.097825 AGCTACTTAATGACCGACCGT 58.902 47.619 0.00 0.00 0.00 4.83
2125 2487 2.865343 AGCTACTTAATGACCGACCG 57.135 50.000 0.00 0.00 0.00 4.79
2126 2488 6.018180 CCATAAAAGCTACTTAATGACCGACC 60.018 42.308 0.00 0.00 0.00 4.79
2127 2489 6.537660 ACCATAAAAGCTACTTAATGACCGAC 59.462 38.462 0.00 0.00 0.00 4.79
2128 2490 6.646267 ACCATAAAAGCTACTTAATGACCGA 58.354 36.000 0.00 0.00 0.00 4.69
2129 2491 6.537301 TGACCATAAAAGCTACTTAATGACCG 59.463 38.462 0.00 0.00 0.00 4.79
2130 2492 7.859325 TGACCATAAAAGCTACTTAATGACC 57.141 36.000 0.00 0.00 0.00 4.02
2131 2493 9.109393 TGATGACCATAAAAGCTACTTAATGAC 57.891 33.333 0.00 0.00 0.00 3.06
2132 2494 9.851686 ATGATGACCATAAAAGCTACTTAATGA 57.148 29.630 0.00 0.00 32.72 2.57
2135 2497 9.273016 GCTATGATGACCATAAAAGCTACTTAA 57.727 33.333 0.00 0.00 37.30 1.85
2136 2498 8.428852 TGCTATGATGACCATAAAAGCTACTTA 58.571 33.333 0.00 0.00 37.30 2.24
2137 2499 7.227512 GTGCTATGATGACCATAAAAGCTACTT 59.772 37.037 0.00 0.00 37.30 2.24
2138 2500 6.708054 GTGCTATGATGACCATAAAAGCTACT 59.292 38.462 0.00 0.00 37.30 2.57
2139 2501 6.708054 AGTGCTATGATGACCATAAAAGCTAC 59.292 38.462 0.00 7.38 37.30 3.58
2140 2502 6.830912 AGTGCTATGATGACCATAAAAGCTA 58.169 36.000 0.00 0.00 37.30 3.32
2141 2503 5.688807 AGTGCTATGATGACCATAAAAGCT 58.311 37.500 9.70 0.00 37.30 3.74
2142 2504 6.382869 AAGTGCTATGATGACCATAAAAGC 57.617 37.500 0.00 0.00 37.30 3.51
2146 2508 9.725019 CCTAATAAAGTGCTATGATGACCATAA 57.275 33.333 0.00 0.00 37.30 1.90
2147 2509 8.321353 CCCTAATAAAGTGCTATGATGACCATA 58.679 37.037 0.00 0.00 36.71 2.74
2148 2510 7.170965 CCCTAATAAAGTGCTATGATGACCAT 58.829 38.462 0.00 0.00 39.25 3.55
2149 2511 6.465751 CCCCTAATAAAGTGCTATGATGACCA 60.466 42.308 0.00 0.00 0.00 4.02
2150 2512 5.940470 CCCCTAATAAAGTGCTATGATGACC 59.060 44.000 0.00 0.00 0.00 4.02
2151 2513 5.412904 GCCCCTAATAAAGTGCTATGATGAC 59.587 44.000 0.00 0.00 0.00 3.06
2152 2514 5.560724 GCCCCTAATAAAGTGCTATGATGA 58.439 41.667 0.00 0.00 0.00 2.92
2153 2515 4.393062 CGCCCCTAATAAAGTGCTATGATG 59.607 45.833 0.00 0.00 0.00 3.07
2154 2516 4.041691 ACGCCCCTAATAAAGTGCTATGAT 59.958 41.667 0.00 0.00 0.00 2.45
2155 2517 3.389983 ACGCCCCTAATAAAGTGCTATGA 59.610 43.478 0.00 0.00 0.00 2.15
2156 2518 3.740115 ACGCCCCTAATAAAGTGCTATG 58.260 45.455 0.00 0.00 0.00 2.23
2157 2519 4.432980 AACGCCCCTAATAAAGTGCTAT 57.567 40.909 0.00 0.00 0.00 2.97
2158 2520 3.918294 AACGCCCCTAATAAAGTGCTA 57.082 42.857 0.00 0.00 0.00 3.49
2159 2521 2.801077 AACGCCCCTAATAAAGTGCT 57.199 45.000 0.00 0.00 0.00 4.40
2160 2522 2.615447 GGTAACGCCCCTAATAAAGTGC 59.385 50.000 0.00 0.00 0.00 4.40
2161 2523 3.875134 CTGGTAACGCCCCTAATAAAGTG 59.125 47.826 0.00 0.00 42.51 3.16
2162 2524 3.520721 ACTGGTAACGCCCCTAATAAAGT 59.479 43.478 0.00 0.00 42.51 2.66
2163 2525 4.146745 ACTGGTAACGCCCCTAATAAAG 57.853 45.455 0.00 0.00 42.51 1.85
2164 2526 5.427378 GTTACTGGTAACGCCCCTAATAAA 58.573 41.667 7.70 0.00 36.47 1.40
2165 2527 5.022282 GTTACTGGTAACGCCCCTAATAA 57.978 43.478 7.70 0.00 36.47 1.40
2166 2528 4.670896 GTTACTGGTAACGCCCCTAATA 57.329 45.455 7.70 0.00 36.47 0.98
2167 2529 3.548745 GTTACTGGTAACGCCCCTAAT 57.451 47.619 7.70 0.00 36.47 1.73
2176 2538 0.737367 GGTCGGGCGTTACTGGTAAC 60.737 60.000 12.13 12.13 41.37 2.50
2177 2539 0.899717 AGGTCGGGCGTTACTGGTAA 60.900 55.000 0.00 0.00 0.00 2.85
2178 2540 0.899717 AAGGTCGGGCGTTACTGGTA 60.900 55.000 0.00 0.00 0.00 3.25
2179 2541 0.899717 TAAGGTCGGGCGTTACTGGT 60.900 55.000 0.00 0.00 0.00 4.00
2180 2542 0.247185 TTAAGGTCGGGCGTTACTGG 59.753 55.000 0.00 0.00 0.00 4.00
2181 2543 1.931172 CATTAAGGTCGGGCGTTACTG 59.069 52.381 0.00 0.00 0.00 2.74
2182 2544 1.551883 ACATTAAGGTCGGGCGTTACT 59.448 47.619 0.00 0.00 0.00 2.24
2183 2545 2.014335 ACATTAAGGTCGGGCGTTAC 57.986 50.000 0.00 0.00 0.00 2.50
2184 2546 2.760092 AGTACATTAAGGTCGGGCGTTA 59.240 45.455 0.00 0.00 0.00 3.18
2185 2547 1.551883 AGTACATTAAGGTCGGGCGTT 59.448 47.619 0.00 0.00 0.00 4.84
2186 2548 1.188863 AGTACATTAAGGTCGGGCGT 58.811 50.000 0.00 0.00 0.00 5.68
2187 2549 2.304751 AAGTACATTAAGGTCGGGCG 57.695 50.000 0.00 0.00 0.00 6.13
2188 2550 5.163723 GGTTTTAAGTACATTAAGGTCGGGC 60.164 44.000 0.00 0.00 34.86 6.13
2189 2551 5.355071 GGGTTTTAAGTACATTAAGGTCGGG 59.645 44.000 0.00 0.00 34.86 5.14
2190 2552 6.093082 CAGGGTTTTAAGTACATTAAGGTCGG 59.907 42.308 0.00 0.00 34.86 4.79
2191 2553 6.402875 GCAGGGTTTTAAGTACATTAAGGTCG 60.403 42.308 0.00 0.00 34.86 4.79
2192 2554 6.431852 TGCAGGGTTTTAAGTACATTAAGGTC 59.568 38.462 0.00 0.00 34.86 3.85
2193 2555 6.308566 TGCAGGGTTTTAAGTACATTAAGGT 58.691 36.000 0.00 0.00 34.86 3.50
2194 2556 6.827586 TGCAGGGTTTTAAGTACATTAAGG 57.172 37.500 0.00 0.00 34.86 2.69
2195 2557 9.783256 GTTATGCAGGGTTTTAAGTACATTAAG 57.217 33.333 0.00 0.00 34.86 1.85
2196 2558 9.523168 AGTTATGCAGGGTTTTAAGTACATTAA 57.477 29.630 0.00 0.00 0.00 1.40
2197 2559 8.952278 CAGTTATGCAGGGTTTTAAGTACATTA 58.048 33.333 0.00 0.00 0.00 1.90
2198 2560 7.668052 TCAGTTATGCAGGGTTTTAAGTACATT 59.332 33.333 0.00 0.00 0.00 2.71
2199 2561 7.172342 TCAGTTATGCAGGGTTTTAAGTACAT 58.828 34.615 0.00 0.00 0.00 2.29
2200 2562 6.535540 TCAGTTATGCAGGGTTTTAAGTACA 58.464 36.000 0.00 0.00 0.00 2.90
2201 2563 6.093633 CCTCAGTTATGCAGGGTTTTAAGTAC 59.906 42.308 0.00 0.00 0.00 2.73
2202 2564 6.177610 CCTCAGTTATGCAGGGTTTTAAGTA 58.822 40.000 0.00 0.00 0.00 2.24
2203 2565 5.010282 CCTCAGTTATGCAGGGTTTTAAGT 58.990 41.667 0.00 0.00 0.00 2.24
2204 2566 4.399303 CCCTCAGTTATGCAGGGTTTTAAG 59.601 45.833 0.00 0.00 38.29 1.85
2205 2567 4.340617 CCCTCAGTTATGCAGGGTTTTAA 58.659 43.478 0.00 0.00 38.29 1.52
2206 2568 3.876156 GCCCTCAGTTATGCAGGGTTTTA 60.876 47.826 6.78 0.00 41.93 1.52
2207 2569 2.807676 CCCTCAGTTATGCAGGGTTTT 58.192 47.619 0.00 0.00 38.29 2.43
2208 2570 1.616994 GCCCTCAGTTATGCAGGGTTT 60.617 52.381 6.78 0.00 41.93 3.27
2209 2571 0.034089 GCCCTCAGTTATGCAGGGTT 60.034 55.000 6.78 0.00 41.93 4.11
2210 2572 1.609783 GCCCTCAGTTATGCAGGGT 59.390 57.895 6.78 0.00 41.93 4.34
2211 2573 1.152881 GGCCCTCAGTTATGCAGGG 60.153 63.158 0.00 0.55 42.40 4.45
2212 2574 1.524621 CGGCCCTCAGTTATGCAGG 60.525 63.158 0.00 0.00 0.00 4.85
2213 2575 1.524621 CCGGCCCTCAGTTATGCAG 60.525 63.158 0.00 0.00 0.00 4.41
2214 2576 1.971505 CTCCGGCCCTCAGTTATGCA 61.972 60.000 0.00 0.00 0.00 3.96
2215 2577 1.227674 CTCCGGCCCTCAGTTATGC 60.228 63.158 0.00 0.00 0.00 3.14
2216 2578 1.447643 CCTCCGGCCCTCAGTTATG 59.552 63.158 0.00 0.00 0.00 1.90
2217 2579 1.766461 CCCTCCGGCCCTCAGTTAT 60.766 63.158 0.00 0.00 0.00 1.89
2218 2580 2.365105 CCCTCCGGCCCTCAGTTA 60.365 66.667 0.00 0.00 0.00 2.24
2236 2598 3.119424 GGCTTATATAGAGTCCGCCAGAC 60.119 52.174 0.00 0.00 46.71 3.51
2237 2599 3.090037 GGCTTATATAGAGTCCGCCAGA 58.910 50.000 0.00 0.00 36.16 3.86
2238 2600 2.826128 TGGCTTATATAGAGTCCGCCAG 59.174 50.000 0.00 0.00 40.76 4.85
2239 2601 2.561419 GTGGCTTATATAGAGTCCGCCA 59.439 50.000 0.00 0.00 43.12 5.69
2240 2602 2.094130 GGTGGCTTATATAGAGTCCGCC 60.094 54.545 14.42 14.42 35.44 6.13
2241 2603 2.094130 GGGTGGCTTATATAGAGTCCGC 60.094 54.545 0.00 0.00 0.00 5.54
2242 2604 3.432378 AGGGTGGCTTATATAGAGTCCG 58.568 50.000 0.00 0.00 0.00 4.79
2243 2605 4.679331 AGAGGGTGGCTTATATAGAGTCC 58.321 47.826 0.00 0.00 0.00 3.85
2244 2606 4.707934 GGAGAGGGTGGCTTATATAGAGTC 59.292 50.000 0.00 0.00 0.00 3.36
2245 2607 4.358614 AGGAGAGGGTGGCTTATATAGAGT 59.641 45.833 0.00 0.00 0.00 3.24
2246 2608 4.941713 AGGAGAGGGTGGCTTATATAGAG 58.058 47.826 0.00 0.00 0.00 2.43
2247 2609 4.357097 TGAGGAGAGGGTGGCTTATATAGA 59.643 45.833 0.00 0.00 0.00 1.98
2248 2610 4.678256 TGAGGAGAGGGTGGCTTATATAG 58.322 47.826 0.00 0.00 0.00 1.31
2249 2611 4.108124 ACTGAGGAGAGGGTGGCTTATATA 59.892 45.833 0.00 0.00 0.00 0.86
2250 2612 3.116551 ACTGAGGAGAGGGTGGCTTATAT 60.117 47.826 0.00 0.00 0.00 0.86
2251 2613 2.247635 ACTGAGGAGAGGGTGGCTTATA 59.752 50.000 0.00 0.00 0.00 0.98
2252 2614 1.008938 ACTGAGGAGAGGGTGGCTTAT 59.991 52.381 0.00 0.00 0.00 1.73
2253 2615 0.413832 ACTGAGGAGAGGGTGGCTTA 59.586 55.000 0.00 0.00 0.00 3.09
2254 2616 1.159664 ACTGAGGAGAGGGTGGCTT 59.840 57.895 0.00 0.00 0.00 4.35
2255 2617 1.611851 CACTGAGGAGAGGGTGGCT 60.612 63.158 0.00 0.00 0.00 4.75
2256 2618 0.614979 TACACTGAGGAGAGGGTGGC 60.615 60.000 0.00 0.00 34.42 5.01
2257 2619 1.938585 TTACACTGAGGAGAGGGTGG 58.061 55.000 0.00 0.00 34.42 4.61
2258 2620 2.234908 CCTTTACACTGAGGAGAGGGTG 59.765 54.545 0.00 0.00 34.91 4.61
2259 2621 2.541466 CCTTTACACTGAGGAGAGGGT 58.459 52.381 0.00 0.00 34.91 4.34
2260 2622 1.834263 CCCTTTACACTGAGGAGAGGG 59.166 57.143 0.00 0.00 36.69 4.30
2261 2623 2.541466 ACCCTTTACACTGAGGAGAGG 58.459 52.381 0.00 0.00 34.91 3.69
2262 2624 3.367498 CGAACCCTTTACACTGAGGAGAG 60.367 52.174 0.00 0.00 34.91 3.20
2263 2625 2.561419 CGAACCCTTTACACTGAGGAGA 59.439 50.000 0.00 0.00 34.91 3.71
2264 2626 2.931320 GCGAACCCTTTACACTGAGGAG 60.931 54.545 0.00 0.00 34.91 3.69
2265 2627 1.001633 GCGAACCCTTTACACTGAGGA 59.998 52.381 0.00 0.00 34.91 3.71
2266 2628 1.270625 TGCGAACCCTTTACACTGAGG 60.271 52.381 0.00 0.00 0.00 3.86
2267 2629 1.798813 GTGCGAACCCTTTACACTGAG 59.201 52.381 0.00 0.00 0.00 3.35
2268 2630 1.541670 GGTGCGAACCCTTTACACTGA 60.542 52.381 0.00 0.00 0.00 3.41
2269 2631 0.872388 GGTGCGAACCCTTTACACTG 59.128 55.000 0.00 0.00 0.00 3.66
2270 2632 0.250597 GGGTGCGAACCCTTTACACT 60.251 55.000 25.95 0.00 46.39 3.55
2271 2633 2.250646 GGGTGCGAACCCTTTACAC 58.749 57.895 25.95 0.00 46.39 2.90
2272 2634 4.804806 GGGTGCGAACCCTTTACA 57.195 55.556 25.95 0.00 46.39 2.41
2279 2641 3.202829 TGAATTATAGGGGTGCGAACC 57.797 47.619 2.96 2.96 0.00 3.62
2280 2642 5.548406 AGTATGAATTATAGGGGTGCGAAC 58.452 41.667 0.00 0.00 0.00 3.95
2281 2643 5.542635 AGAGTATGAATTATAGGGGTGCGAA 59.457 40.000 0.00 0.00 0.00 4.70
2282 2644 5.084519 AGAGTATGAATTATAGGGGTGCGA 58.915 41.667 0.00 0.00 0.00 5.10
2283 2645 5.047306 TGAGAGTATGAATTATAGGGGTGCG 60.047 44.000 0.00 0.00 0.00 5.34
2284 2646 6.360370 TGAGAGTATGAATTATAGGGGTGC 57.640 41.667 0.00 0.00 0.00 5.01
2293 2655 9.297037 TCGACTGGATTATGAGAGTATGAATTA 57.703 33.333 0.00 0.00 0.00 1.40
2294 2656 8.085296 GTCGACTGGATTATGAGAGTATGAATT 58.915 37.037 8.70 0.00 0.00 2.17
2295 2657 7.309499 GGTCGACTGGATTATGAGAGTATGAAT 60.309 40.741 16.46 0.00 0.00 2.57
2296 2658 6.016192 GGTCGACTGGATTATGAGAGTATGAA 60.016 42.308 16.46 0.00 0.00 2.57
2297 2659 5.473846 GGTCGACTGGATTATGAGAGTATGA 59.526 44.000 16.46 0.00 0.00 2.15
2298 2660 5.617973 CGGTCGACTGGATTATGAGAGTATG 60.618 48.000 16.99 0.00 0.00 2.39
2299 2661 4.456222 CGGTCGACTGGATTATGAGAGTAT 59.544 45.833 16.99 0.00 0.00 2.12
2300 2662 3.813724 CGGTCGACTGGATTATGAGAGTA 59.186 47.826 16.99 0.00 0.00 2.59
2301 2663 2.619177 CGGTCGACTGGATTATGAGAGT 59.381 50.000 16.99 0.00 0.00 3.24
2302 2664 2.605823 GCGGTCGACTGGATTATGAGAG 60.606 54.545 25.20 0.00 0.00 3.20
2303 2665 1.337071 GCGGTCGACTGGATTATGAGA 59.663 52.381 25.20 0.00 0.00 3.27
2304 2666 1.603172 GGCGGTCGACTGGATTATGAG 60.603 57.143 25.20 1.60 0.00 2.90
2305 2667 0.387929 GGCGGTCGACTGGATTATGA 59.612 55.000 25.20 0.00 0.00 2.15
2306 2668 0.389391 AGGCGGTCGACTGGATTATG 59.611 55.000 25.20 2.50 28.47 1.90
2307 2669 0.674534 GAGGCGGTCGACTGGATTAT 59.325 55.000 25.20 0.92 30.74 1.28
2308 2670 1.389609 GGAGGCGGTCGACTGGATTA 61.390 60.000 25.20 0.00 30.74 1.75
2309 2671 2.722201 GGAGGCGGTCGACTGGATT 61.722 63.158 25.20 3.32 30.74 3.01
2310 2672 3.148279 GGAGGCGGTCGACTGGAT 61.148 66.667 25.20 5.10 30.74 3.41
2313 2675 4.778415 CACGGAGGCGGTCGACTG 62.778 72.222 20.35 20.35 30.74 3.51
2322 2684 4.500116 GTCTCGGAGCACGGAGGC 62.500 72.222 16.52 12.33 44.45 4.70
2323 2685 4.180946 CGTCTCGGAGCACGGAGG 62.181 72.222 16.52 7.80 44.45 4.30
2324 2686 2.037913 CTACGTCTCGGAGCACGGAG 62.038 65.000 23.66 21.91 40.48 4.63
2325 2687 2.046988 TACGTCTCGGAGCACGGA 60.047 61.111 23.66 17.47 44.45 4.69
2326 2688 2.403987 CTACGTCTCGGAGCACGG 59.596 66.667 23.66 10.90 44.45 4.94
2327 2689 2.403987 CCTACGTCTCGGAGCACG 59.596 66.667 20.55 20.55 46.11 5.34
2328 2690 2.799371 CCCTACGTCTCGGAGCAC 59.201 66.667 0.00 0.00 36.34 4.40
2329 2691 2.261430 TAGCCCTACGTCTCGGAGCA 62.261 60.000 0.00 0.00 36.34 4.26
2330 2692 0.890090 ATAGCCCTACGTCTCGGAGC 60.890 60.000 0.00 0.00 36.34 4.70
2331 2693 1.606903 AATAGCCCTACGTCTCGGAG 58.393 55.000 0.00 0.00 37.59 4.63
2332 2694 2.105477 AGTAATAGCCCTACGTCTCGGA 59.895 50.000 0.00 0.00 0.00 4.55
2333 2695 2.502295 AGTAATAGCCCTACGTCTCGG 58.498 52.381 0.00 0.00 0.00 4.63
2334 2696 3.058363 GGAAGTAATAGCCCTACGTCTCG 60.058 52.174 0.00 0.00 31.08 4.04
2335 2697 4.143543 AGGAAGTAATAGCCCTACGTCTC 58.856 47.826 0.00 0.00 31.08 3.36
2336 2698 4.181799 AGGAAGTAATAGCCCTACGTCT 57.818 45.455 0.00 0.00 31.08 4.18
2337 2699 4.556302 CGAAGGAAGTAATAGCCCTACGTC 60.556 50.000 0.00 0.00 0.00 4.34
2338 2700 3.317430 CGAAGGAAGTAATAGCCCTACGT 59.683 47.826 0.00 0.00 0.00 3.57
2339 2701 3.567164 TCGAAGGAAGTAATAGCCCTACG 59.433 47.826 0.00 0.00 0.00 3.51
2340 2702 4.826183 TCTCGAAGGAAGTAATAGCCCTAC 59.174 45.833 0.00 0.00 0.00 3.18
2341 2703 5.057843 TCTCGAAGGAAGTAATAGCCCTA 57.942 43.478 0.00 0.00 0.00 3.53
2342 2704 3.912248 TCTCGAAGGAAGTAATAGCCCT 58.088 45.455 0.00 0.00 0.00 5.19
2343 2705 4.623002 CTTCTCGAAGGAAGTAATAGCCC 58.377 47.826 6.31 0.00 38.22 5.19
2356 2718 0.610687 AGTTCAGGCCCTTCTCGAAG 59.389 55.000 0.00 0.00 38.14 3.79
2357 2719 0.608640 GAGTTCAGGCCCTTCTCGAA 59.391 55.000 0.00 0.00 0.00 3.71
2358 2720 1.595993 CGAGTTCAGGCCCTTCTCGA 61.596 60.000 23.42 0.00 46.92 4.04
2359 2721 1.153745 CGAGTTCAGGCCCTTCTCG 60.154 63.158 17.87 17.87 41.02 4.04
2360 2722 1.183549 TACGAGTTCAGGCCCTTCTC 58.816 55.000 0.00 1.73 0.00 2.87
2361 2723 1.640917 TTACGAGTTCAGGCCCTTCT 58.359 50.000 0.00 0.00 0.00 2.85
2362 2724 2.074576 GTTTACGAGTTCAGGCCCTTC 58.925 52.381 0.00 0.00 0.00 3.46
2363 2725 1.271217 GGTTTACGAGTTCAGGCCCTT 60.271 52.381 0.00 0.00 0.00 3.95
2364 2726 0.323957 GGTTTACGAGTTCAGGCCCT 59.676 55.000 0.00 0.00 0.00 5.19
2365 2727 0.323957 AGGTTTACGAGTTCAGGCCC 59.676 55.000 0.00 0.00 0.00 5.80
2366 2728 1.804748 CAAGGTTTACGAGTTCAGGCC 59.195 52.381 0.00 0.00 0.00 5.19
2367 2729 1.197036 GCAAGGTTTACGAGTTCAGGC 59.803 52.381 0.00 0.00 0.00 4.85
2368 2730 1.459592 CGCAAGGTTTACGAGTTCAGG 59.540 52.381 0.00 0.00 0.00 3.86
2369 2731 2.132762 ACGCAAGGTTTACGAGTTCAG 58.867 47.619 0.00 0.00 46.39 3.02
2370 2732 2.228138 ACGCAAGGTTTACGAGTTCA 57.772 45.000 0.00 0.00 46.39 3.18
2371 2733 2.798847 AGAACGCAAGGTTTACGAGTTC 59.201 45.455 0.00 0.00 37.50 3.01
2372 2734 2.830104 AGAACGCAAGGTTTACGAGTT 58.170 42.857 0.00 0.00 37.50 3.01
2373 2735 2.521105 AGAACGCAAGGTTTACGAGT 57.479 45.000 0.00 0.00 37.50 4.18
2374 2736 3.737266 TGTAAGAACGCAAGGTTTACGAG 59.263 43.478 0.00 0.00 37.50 4.18
2375 2737 3.715495 TGTAAGAACGCAAGGTTTACGA 58.285 40.909 0.00 0.00 37.50 3.43
2376 2738 4.025480 AGTTGTAAGAACGCAAGGTTTACG 60.025 41.667 0.00 0.00 37.50 3.18
2377 2739 5.413969 AGTTGTAAGAACGCAAGGTTTAC 57.586 39.130 0.00 0.00 37.50 2.01
2378 2740 6.051646 GAAGTTGTAAGAACGCAAGGTTTA 57.948 37.500 0.00 0.00 37.50 2.01
2379 2741 4.916870 GAAGTTGTAAGAACGCAAGGTTT 58.083 39.130 0.00 0.00 37.50 3.27
2380 2742 4.547406 GAAGTTGTAAGAACGCAAGGTT 57.453 40.909 0.00 0.00 37.50 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.