Multiple sequence alignment - TraesCS2A01G348400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G348400 chr2A 100.000 3980 0 0 1 3980 587270633 587274612 0.000000e+00 7350.0
1 TraesCS2A01G348400 chr2A 93.987 316 16 2 92 404 28180994 28180679 3.600000e-130 475.0
2 TraesCS2A01G348400 chr2B 96.013 3386 98 16 609 3980 523082134 523085496 0.000000e+00 5470.0
3 TraesCS2A01G348400 chr2D 96.921 3085 71 7 907 3980 444759481 444762552 0.000000e+00 5149.0
4 TraesCS2A01G348400 chr2D 100.000 33 0 0 497 529 444757528 444757560 1.190000e-05 62.1
5 TraesCS2A01G348400 chr4A 93.730 319 17 2 89 404 2003210 2002892 3.600000e-130 475.0
6 TraesCS2A01G348400 chr4A 92.308 325 21 3 84 404 154942695 154943019 3.620000e-125 459.0
7 TraesCS2A01G348400 chr4A 89.362 47 5 0 2 48 437853095 437853049 4.300000e-05 60.2
8 TraesCS2A01G348400 chr6A 93.396 318 18 2 90 404 276010337 276010020 6.020000e-128 468.0
9 TraesCS2A01G348400 chr6A 92.767 318 20 2 90 404 566730083 566729766 1.300000e-124 457.0
10 TraesCS2A01G348400 chr3A 92.355 327 21 3 89 411 126469513 126469839 2.800000e-126 462.0
11 TraesCS2A01G348400 chr3A 93.082 318 18 3 90 404 215341188 215340872 2.800000e-126 462.0
12 TraesCS2A01G348400 chr1A 92.835 321 19 3 88 404 287389342 287389662 2.800000e-126 462.0
13 TraesCS2A01G348400 chr1A 93.060 317 18 3 91 404 168709152 168708837 1.010000e-125 460.0
14 TraesCS2A01G348400 chr7A 100.000 28 0 0 19 46 13186437 13186464 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G348400 chr2A 587270633 587274612 3979 False 7350.00 7350 100.0000 1 3980 1 chr2A.!!$F1 3979
1 TraesCS2A01G348400 chr2B 523082134 523085496 3362 False 5470.00 5470 96.0130 609 3980 1 chr2B.!!$F1 3371
2 TraesCS2A01G348400 chr2D 444757528 444762552 5024 False 2605.55 5149 98.4605 497 3980 2 chr2D.!!$F1 3483

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
582 583 0.035056 GCCTGCCTGGTATTCACAGT 60.035 55.0 0.00 0.0 38.35 3.55 F
594 595 0.038166 TTCACAGTGGGGGAAGATGC 59.962 55.0 0.00 0.0 0.00 3.91 F
609 610 0.040246 GATGCGACGCTAGTCCTACC 60.040 60.0 22.08 0.0 44.28 3.18 F
613 614 0.463295 CGACGCTAGTCCTACCCTCA 60.463 60.0 0.00 0.0 44.28 3.86 F
1440 2984 0.781278 TCCGGGAGATTTTTGGGGTT 59.219 50.0 0.00 0.0 0.00 4.11 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1494 3038 0.807496 AGCCGAGCAAGAGAAAATGC 59.193 50.000 0.00 0.0 42.87 3.56 R
1608 3152 0.835276 CATCCATGGCACTCTGAGGA 59.165 55.000 6.96 0.0 0.00 3.71 R
1683 3227 0.983467 TGACATGGGAGCTTACTGCA 59.017 50.000 0.00 0.0 45.94 4.41 R
1734 3278 1.207390 CTAGCGACTTCATGAGCTGC 58.793 55.000 15.41 9.6 40.51 5.25 R
3263 4807 2.906389 AGATCTTGTACCAAGCTGTCCA 59.094 45.455 0.00 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.883142 TTTACTTTTTGGATGATGTTTCTTTGT 57.117 25.926 0.00 0.00 0.00 2.83
29 30 7.775397 ACTTTTTGGATGATGTTTCTTTGTG 57.225 32.000 0.00 0.00 0.00 3.33
30 31 6.258507 ACTTTTTGGATGATGTTTCTTTGTGC 59.741 34.615 0.00 0.00 0.00 4.57
31 32 4.933505 TTGGATGATGTTTCTTTGTGCA 57.066 36.364 0.00 0.00 0.00 4.57
32 33 4.933505 TGGATGATGTTTCTTTGTGCAA 57.066 36.364 0.00 0.00 0.00 4.08
33 34 5.273674 TGGATGATGTTTCTTTGTGCAAA 57.726 34.783 0.00 0.00 0.00 3.68
34 35 5.291178 TGGATGATGTTTCTTTGTGCAAAG 58.709 37.500 16.16 16.16 46.82 2.77
48 49 6.995511 TTGTGCAAAGACTAGTGTTTTACT 57.004 33.333 14.90 0.00 43.56 2.24
49 50 8.495361 TTTGTGCAAAGACTAGTGTTTTACTA 57.505 30.769 14.90 11.08 40.89 1.82
50 51 8.671384 TTGTGCAAAGACTAGTGTTTTACTAT 57.329 30.769 14.90 0.00 40.94 2.12
51 52 8.671384 TGTGCAAAGACTAGTGTTTTACTATT 57.329 30.769 14.90 0.00 40.94 1.73
52 53 9.116067 TGTGCAAAGACTAGTGTTTTACTATTT 57.884 29.630 14.90 0.00 40.94 1.40
53 54 9.382244 GTGCAAAGACTAGTGTTTTACTATTTG 57.618 33.333 14.90 4.17 40.94 2.32
54 55 9.116067 TGCAAAGACTAGTGTTTTACTATTTGT 57.884 29.630 14.90 0.00 40.94 2.83
55 56 9.946165 GCAAAGACTAGTGTTTTACTATTTGTT 57.054 29.630 14.90 0.00 40.94 2.83
75 76 7.648039 TTGTTCAGTTTTATTAGGTTGGTGT 57.352 32.000 0.00 0.00 0.00 4.16
76 77 7.033530 TGTTCAGTTTTATTAGGTTGGTGTG 57.966 36.000 0.00 0.00 0.00 3.82
77 78 6.603997 TGTTCAGTTTTATTAGGTTGGTGTGT 59.396 34.615 0.00 0.00 0.00 3.72
78 79 7.774157 TGTTCAGTTTTATTAGGTTGGTGTGTA 59.226 33.333 0.00 0.00 0.00 2.90
79 80 8.789762 GTTCAGTTTTATTAGGTTGGTGTGTAT 58.210 33.333 0.00 0.00 0.00 2.29
80 81 8.330466 TCAGTTTTATTAGGTTGGTGTGTATG 57.670 34.615 0.00 0.00 0.00 2.39
81 82 7.940137 TCAGTTTTATTAGGTTGGTGTGTATGT 59.060 33.333 0.00 0.00 0.00 2.29
82 83 8.573035 CAGTTTTATTAGGTTGGTGTGTATGTT 58.427 33.333 0.00 0.00 0.00 2.71
83 84 9.138596 AGTTTTATTAGGTTGGTGTGTATGTTT 57.861 29.630 0.00 0.00 0.00 2.83
84 85 9.752961 GTTTTATTAGGTTGGTGTGTATGTTTT 57.247 29.630 0.00 0.00 0.00 2.43
85 86 9.968870 TTTTATTAGGTTGGTGTGTATGTTTTC 57.031 29.630 0.00 0.00 0.00 2.29
86 87 8.927675 TTATTAGGTTGGTGTGTATGTTTTCT 57.072 30.769 0.00 0.00 0.00 2.52
87 88 7.833285 ATTAGGTTGGTGTGTATGTTTTCTT 57.167 32.000 0.00 0.00 0.00 2.52
88 89 7.648039 TTAGGTTGGTGTGTATGTTTTCTTT 57.352 32.000 0.00 0.00 0.00 2.52
89 90 8.749026 TTAGGTTGGTGTGTATGTTTTCTTTA 57.251 30.769 0.00 0.00 0.00 1.85
90 91 7.272037 AGGTTGGTGTGTATGTTTTCTTTAG 57.728 36.000 0.00 0.00 0.00 1.85
91 92 6.264518 AGGTTGGTGTGTATGTTTTCTTTAGG 59.735 38.462 0.00 0.00 0.00 2.69
92 93 6.443792 GTTGGTGTGTATGTTTTCTTTAGGG 58.556 40.000 0.00 0.00 0.00 3.53
93 94 5.942961 TGGTGTGTATGTTTTCTTTAGGGA 58.057 37.500 0.00 0.00 0.00 4.20
94 95 6.366340 TGGTGTGTATGTTTTCTTTAGGGAA 58.634 36.000 0.00 0.00 0.00 3.97
95 96 6.834451 TGGTGTGTATGTTTTCTTTAGGGAAA 59.166 34.615 0.00 0.00 33.98 3.13
96 97 7.342284 TGGTGTGTATGTTTTCTTTAGGGAAAA 59.658 33.333 0.00 0.00 41.17 2.29
97 98 8.364894 GGTGTGTATGTTTTCTTTAGGGAAAAT 58.635 33.333 5.83 0.00 43.85 1.82
98 99 9.758651 GTGTGTATGTTTTCTTTAGGGAAAATT 57.241 29.630 5.83 1.42 43.85 1.82
108 109 9.847706 TTTCTTTAGGGAAAATTTTGTTTTTGC 57.152 25.926 8.47 0.00 36.52 3.68
124 125 7.761651 TGTTTTTGCCATTTTAATTTTTGCC 57.238 28.000 0.00 0.00 0.00 4.52
125 126 6.758416 TGTTTTTGCCATTTTAATTTTTGCCC 59.242 30.769 0.00 0.00 0.00 5.36
126 127 6.469782 TTTTGCCATTTTAATTTTTGCCCA 57.530 29.167 0.00 0.00 0.00 5.36
127 128 5.444663 TTGCCATTTTAATTTTTGCCCAC 57.555 34.783 0.00 0.00 0.00 4.61
128 129 4.723309 TGCCATTTTAATTTTTGCCCACT 58.277 34.783 0.00 0.00 0.00 4.00
129 130 5.136105 TGCCATTTTAATTTTTGCCCACTT 58.864 33.333 0.00 0.00 0.00 3.16
130 131 5.595952 TGCCATTTTAATTTTTGCCCACTTT 59.404 32.000 0.00 0.00 0.00 2.66
131 132 6.772716 TGCCATTTTAATTTTTGCCCACTTTA 59.227 30.769 0.00 0.00 0.00 1.85
132 133 7.081349 GCCATTTTAATTTTTGCCCACTTTAC 58.919 34.615 0.00 0.00 0.00 2.01
133 134 7.040755 GCCATTTTAATTTTTGCCCACTTTACT 60.041 33.333 0.00 0.00 0.00 2.24
134 135 8.845227 CCATTTTAATTTTTGCCCACTTTACTT 58.155 29.630 0.00 0.00 0.00 2.24
138 139 8.541133 TTAATTTTTGCCCACTTTACTTATGC 57.459 30.769 0.00 0.00 0.00 3.14
139 140 4.529109 TTTTGCCCACTTTACTTATGCC 57.471 40.909 0.00 0.00 0.00 4.40
140 141 2.889170 TGCCCACTTTACTTATGCCA 57.111 45.000 0.00 0.00 0.00 4.92
141 142 2.442413 TGCCCACTTTACTTATGCCAC 58.558 47.619 0.00 0.00 0.00 5.01
142 143 2.041081 TGCCCACTTTACTTATGCCACT 59.959 45.455 0.00 0.00 0.00 4.00
143 144 2.683362 GCCCACTTTACTTATGCCACTC 59.317 50.000 0.00 0.00 0.00 3.51
144 145 3.622455 GCCCACTTTACTTATGCCACTCT 60.622 47.826 0.00 0.00 0.00 3.24
145 146 4.383770 GCCCACTTTACTTATGCCACTCTA 60.384 45.833 0.00 0.00 0.00 2.43
146 147 5.360591 CCCACTTTACTTATGCCACTCTAG 58.639 45.833 0.00 0.00 0.00 2.43
147 148 5.128827 CCCACTTTACTTATGCCACTCTAGA 59.871 44.000 0.00 0.00 0.00 2.43
148 149 6.351881 CCCACTTTACTTATGCCACTCTAGAA 60.352 42.308 0.00 0.00 0.00 2.10
149 150 7.275920 CCACTTTACTTATGCCACTCTAGAAT 58.724 38.462 0.00 0.00 0.00 2.40
150 151 7.770897 CCACTTTACTTATGCCACTCTAGAATT 59.229 37.037 0.00 0.00 0.00 2.17
151 152 9.167311 CACTTTACTTATGCCACTCTAGAATTT 57.833 33.333 0.00 0.00 0.00 1.82
152 153 9.167311 ACTTTACTTATGCCACTCTAGAATTTG 57.833 33.333 0.00 0.00 0.00 2.32
153 154 9.383519 CTTTACTTATGCCACTCTAGAATTTGA 57.616 33.333 0.00 0.00 0.00 2.69
154 155 9.905713 TTTACTTATGCCACTCTAGAATTTGAT 57.094 29.630 0.00 0.00 0.00 2.57
157 158 9.717942 ACTTATGCCACTCTAGAATTTGATATC 57.282 33.333 0.00 0.00 0.00 1.63
158 159 9.941325 CTTATGCCACTCTAGAATTTGATATCT 57.059 33.333 3.98 0.00 0.00 1.98
159 160 9.935241 TTATGCCACTCTAGAATTTGATATCTC 57.065 33.333 3.98 0.00 0.00 2.75
160 161 7.365497 TGCCACTCTAGAATTTGATATCTCA 57.635 36.000 3.98 0.00 0.00 3.27
161 162 7.212976 TGCCACTCTAGAATTTGATATCTCAC 58.787 38.462 3.98 0.00 0.00 3.51
162 163 6.648725 GCCACTCTAGAATTTGATATCTCACC 59.351 42.308 3.98 0.00 0.00 4.02
163 164 7.472663 GCCACTCTAGAATTTGATATCTCACCT 60.473 40.741 3.98 0.00 0.00 4.00
164 165 8.428063 CCACTCTAGAATTTGATATCTCACCTT 58.572 37.037 3.98 0.00 0.00 3.50
165 166 9.829507 CACTCTAGAATTTGATATCTCACCTTT 57.170 33.333 3.98 0.00 0.00 3.11
166 167 9.829507 ACTCTAGAATTTGATATCTCACCTTTG 57.170 33.333 3.98 0.00 0.00 2.77
167 168 8.668510 TCTAGAATTTGATATCTCACCTTTGC 57.331 34.615 3.98 0.00 0.00 3.68
168 169 6.705863 AGAATTTGATATCTCACCTTTGCC 57.294 37.500 3.98 0.00 0.00 4.52
169 170 6.189859 AGAATTTGATATCTCACCTTTGCCA 58.810 36.000 3.98 0.00 0.00 4.92
170 171 5.841957 ATTTGATATCTCACCTTTGCCAC 57.158 39.130 3.98 0.00 0.00 5.01
171 172 4.574674 TTGATATCTCACCTTTGCCACT 57.425 40.909 3.98 0.00 0.00 4.00
172 173 4.142609 TGATATCTCACCTTTGCCACTC 57.857 45.455 3.98 0.00 0.00 3.51
173 174 3.776969 TGATATCTCACCTTTGCCACTCT 59.223 43.478 3.98 0.00 0.00 3.24
174 175 4.225942 TGATATCTCACCTTTGCCACTCTT 59.774 41.667 3.98 0.00 0.00 2.85
175 176 5.425217 TGATATCTCACCTTTGCCACTCTTA 59.575 40.000 3.98 0.00 0.00 2.10
176 177 4.640771 ATCTCACCTTTGCCACTCTTAA 57.359 40.909 0.00 0.00 0.00 1.85
177 178 3.740115 TCTCACCTTTGCCACTCTTAAC 58.260 45.455 0.00 0.00 0.00 2.01
178 179 3.391296 TCTCACCTTTGCCACTCTTAACT 59.609 43.478 0.00 0.00 0.00 2.24
179 180 4.137543 CTCACCTTTGCCACTCTTAACTT 58.862 43.478 0.00 0.00 0.00 2.66
180 181 4.532834 TCACCTTTGCCACTCTTAACTTT 58.467 39.130 0.00 0.00 0.00 2.66
181 182 4.953579 TCACCTTTGCCACTCTTAACTTTT 59.046 37.500 0.00 0.00 0.00 2.27
182 183 5.043248 CACCTTTGCCACTCTTAACTTTTG 58.957 41.667 0.00 0.00 0.00 2.44
183 184 4.953579 ACCTTTGCCACTCTTAACTTTTGA 59.046 37.500 0.00 0.00 0.00 2.69
184 185 5.163550 ACCTTTGCCACTCTTAACTTTTGAC 60.164 40.000 0.00 0.00 0.00 3.18
185 186 5.163561 CCTTTGCCACTCTTAACTTTTGACA 60.164 40.000 0.00 0.00 0.00 3.58
186 187 5.906113 TTGCCACTCTTAACTTTTGACAA 57.094 34.783 0.00 0.00 0.00 3.18
187 188 6.463995 TTGCCACTCTTAACTTTTGACAAT 57.536 33.333 0.00 0.00 0.00 2.71
188 189 7.575414 TTGCCACTCTTAACTTTTGACAATA 57.425 32.000 0.00 0.00 0.00 1.90
189 190 6.966021 TGCCACTCTTAACTTTTGACAATAC 58.034 36.000 0.00 0.00 0.00 1.89
190 191 6.544197 TGCCACTCTTAACTTTTGACAATACA 59.456 34.615 0.00 0.00 0.00 2.29
191 192 7.230510 TGCCACTCTTAACTTTTGACAATACAT 59.769 33.333 0.00 0.00 0.00 2.29
192 193 7.750903 GCCACTCTTAACTTTTGACAATACATC 59.249 37.037 0.00 0.00 0.00 3.06
193 194 8.783093 CCACTCTTAACTTTTGACAATACATCA 58.217 33.333 0.00 0.00 0.00 3.07
194 195 9.599322 CACTCTTAACTTTTGACAATACATCAC 57.401 33.333 0.00 0.00 0.00 3.06
195 196 9.337396 ACTCTTAACTTTTGACAATACATCACA 57.663 29.630 0.00 0.00 0.00 3.58
200 201 7.642071 ACTTTTGACAATACATCACAAATGC 57.358 32.000 0.00 0.00 32.69 3.56
201 202 6.646240 ACTTTTGACAATACATCACAAATGCC 59.354 34.615 0.00 0.00 32.69 4.40
202 203 5.718724 TTGACAATACATCACAAATGCCA 57.281 34.783 0.00 0.00 0.00 4.92
203 204 5.918426 TGACAATACATCACAAATGCCAT 57.082 34.783 0.00 0.00 0.00 4.40
204 205 6.283544 TGACAATACATCACAAATGCCATT 57.716 33.333 0.00 0.00 0.00 3.16
205 206 6.331845 TGACAATACATCACAAATGCCATTC 58.668 36.000 0.00 0.00 0.00 2.67
206 207 6.071503 TGACAATACATCACAAATGCCATTCA 60.072 34.615 0.00 0.00 0.00 2.57
207 208 6.334989 ACAATACATCACAAATGCCATTCAG 58.665 36.000 0.00 0.00 0.00 3.02
208 209 6.071221 ACAATACATCACAAATGCCATTCAGT 60.071 34.615 0.00 0.00 0.00 3.41
209 210 4.182693 ACATCACAAATGCCATTCAGTG 57.817 40.909 13.70 13.70 32.66 3.66
219 220 2.906691 CCATTCAGTGGCAAAAACCA 57.093 45.000 0.00 0.00 42.12 3.67
220 221 3.405823 CCATTCAGTGGCAAAAACCAT 57.594 42.857 0.00 0.00 43.01 3.55
221 222 4.533919 CCATTCAGTGGCAAAAACCATA 57.466 40.909 0.00 0.00 43.01 2.74
222 223 4.892433 CCATTCAGTGGCAAAAACCATAA 58.108 39.130 0.00 0.00 43.01 1.90
223 224 5.490159 CCATTCAGTGGCAAAAACCATAAT 58.510 37.500 0.00 0.00 43.01 1.28
224 225 5.939296 CCATTCAGTGGCAAAAACCATAATT 59.061 36.000 0.00 0.00 43.01 1.40
225 226 6.430616 CCATTCAGTGGCAAAAACCATAATTT 59.569 34.615 0.00 0.00 43.01 1.82
226 227 7.040548 CCATTCAGTGGCAAAAACCATAATTTT 60.041 33.333 0.00 0.00 43.01 1.82
227 228 7.872113 TTCAGTGGCAAAAACCATAATTTTT 57.128 28.000 0.00 0.00 43.01 1.94
228 229 7.489574 TCAGTGGCAAAAACCATAATTTTTC 57.510 32.000 0.00 0.00 43.01 2.29
229 230 7.050377 TCAGTGGCAAAAACCATAATTTTTCA 58.950 30.769 0.00 0.00 43.01 2.69
230 231 7.718753 TCAGTGGCAAAAACCATAATTTTTCAT 59.281 29.630 0.00 0.00 43.01 2.57
231 232 8.351461 CAGTGGCAAAAACCATAATTTTTCATT 58.649 29.630 0.00 0.00 43.01 2.57
232 233 8.911965 AGTGGCAAAAACCATAATTTTTCATTT 58.088 25.926 0.00 0.00 43.01 2.32
233 234 9.179552 GTGGCAAAAACCATAATTTTTCATTTC 57.820 29.630 0.00 0.00 43.01 2.17
234 235 8.906867 TGGCAAAAACCATAATTTTTCATTTCA 58.093 25.926 0.00 0.00 39.25 2.69
235 236 9.179552 GGCAAAAACCATAATTTTTCATTTCAC 57.820 29.630 0.00 0.00 39.25 3.18
236 237 9.949174 GCAAAAACCATAATTTTTCATTTCACT 57.051 25.926 0.00 0.00 39.25 3.41
241 242 9.949174 AACCATAATTTTTCATTTCACTTTTGC 57.051 25.926 0.00 0.00 0.00 3.68
242 243 8.567104 ACCATAATTTTTCATTTCACTTTTGCC 58.433 29.630 0.00 0.00 0.00 4.52
243 244 8.566260 CCATAATTTTTCATTTCACTTTTGCCA 58.434 29.630 0.00 0.00 0.00 4.92
244 245 9.384682 CATAATTTTTCATTTCACTTTTGCCAC 57.615 29.630 0.00 0.00 0.00 5.01
245 246 7.628769 AATTTTTCATTTCACTTTTGCCACT 57.371 28.000 0.00 0.00 0.00 4.00
246 247 6.660887 TTTTTCATTTCACTTTTGCCACTC 57.339 33.333 0.00 0.00 0.00 3.51
247 248 5.596836 TTTCATTTCACTTTTGCCACTCT 57.403 34.783 0.00 0.00 0.00 3.24
248 249 5.596836 TTCATTTCACTTTTGCCACTCTT 57.403 34.783 0.00 0.00 0.00 2.85
249 250 6.707440 TTCATTTCACTTTTGCCACTCTTA 57.293 33.333 0.00 0.00 0.00 2.10
250 251 6.707440 TCATTTCACTTTTGCCACTCTTAA 57.293 33.333 0.00 0.00 0.00 1.85
251 252 6.738114 TCATTTCACTTTTGCCACTCTTAAG 58.262 36.000 0.00 0.00 0.00 1.85
252 253 6.321181 TCATTTCACTTTTGCCACTCTTAAGT 59.679 34.615 1.63 0.00 35.60 2.24
253 254 6.524101 TTTCACTTTTGCCACTCTTAAGTT 57.476 33.333 1.63 0.00 31.71 2.66
254 255 6.524101 TTCACTTTTGCCACTCTTAAGTTT 57.476 33.333 1.63 0.00 31.71 2.66
255 256 6.524101 TCACTTTTGCCACTCTTAAGTTTT 57.476 33.333 1.63 0.00 31.71 2.43
256 257 6.329496 TCACTTTTGCCACTCTTAAGTTTTG 58.671 36.000 1.63 0.00 31.71 2.44
257 258 5.005682 CACTTTTGCCACTCTTAAGTTTTGC 59.994 40.000 1.63 3.00 31.71 3.68
258 259 4.727507 TTTGCCACTCTTAAGTTTTGCA 57.272 36.364 1.63 5.52 31.71 4.08
259 260 4.727507 TTGCCACTCTTAAGTTTTGCAA 57.272 36.364 15.82 15.82 38.55 4.08
260 261 4.935352 TGCCACTCTTAAGTTTTGCAAT 57.065 36.364 0.00 0.00 32.17 3.56
261 262 4.619973 TGCCACTCTTAAGTTTTGCAATG 58.380 39.130 0.00 0.00 32.17 2.82
262 263 4.099266 TGCCACTCTTAAGTTTTGCAATGT 59.901 37.500 0.00 0.00 32.17 2.71
263 264 5.300539 TGCCACTCTTAAGTTTTGCAATGTA 59.699 36.000 0.00 0.00 32.17 2.29
264 265 6.015519 TGCCACTCTTAAGTTTTGCAATGTAT 60.016 34.615 0.00 0.00 32.17 2.29
265 266 6.528072 GCCACTCTTAAGTTTTGCAATGTATC 59.472 38.462 0.00 0.00 31.71 2.24
266 267 7.592938 CCACTCTTAAGTTTTGCAATGTATCA 58.407 34.615 0.00 0.00 31.71 2.15
267 268 7.538678 CCACTCTTAAGTTTTGCAATGTATCAC 59.461 37.037 0.00 0.00 31.71 3.06
268 269 8.075574 CACTCTTAAGTTTTGCAATGTATCACA 58.924 33.333 0.00 0.00 31.71 3.58
269 270 8.629158 ACTCTTAAGTTTTGCAATGTATCACAA 58.371 29.630 0.00 0.00 28.74 3.33
270 271 9.630098 CTCTTAAGTTTTGCAATGTATCACAAT 57.370 29.630 0.00 0.00 0.00 2.71
271 272 9.979578 TCTTAAGTTTTGCAATGTATCACAATT 57.020 25.926 0.00 0.00 0.00 2.32
273 274 6.470557 AGTTTTGCAATGTATCACAATTGC 57.529 33.333 5.05 12.26 40.09 3.56
274 275 5.409214 AGTTTTGCAATGTATCACAATTGCC 59.591 36.000 15.52 3.03 39.53 4.52
275 276 4.532314 TTGCAATGTATCACAATTGCCA 57.468 36.364 15.52 4.36 39.53 4.92
276 277 3.847542 TGCAATGTATCACAATTGCCAC 58.152 40.909 15.52 0.00 39.53 5.01
277 278 3.510753 TGCAATGTATCACAATTGCCACT 59.489 39.130 15.52 0.00 39.53 4.00
278 279 4.021280 TGCAATGTATCACAATTGCCACTT 60.021 37.500 15.52 0.00 39.53 3.16
279 280 4.931002 GCAATGTATCACAATTGCCACTTT 59.069 37.500 5.05 0.79 37.01 2.66
280 281 5.163933 GCAATGTATCACAATTGCCACTTTG 60.164 40.000 5.05 12.53 37.01 2.77
281 282 5.981088 ATGTATCACAATTGCCACTTTGA 57.019 34.783 5.05 0.71 0.00 2.69
282 283 5.781210 TGTATCACAATTGCCACTTTGAA 57.219 34.783 5.05 0.00 0.00 2.69
283 284 6.154203 TGTATCACAATTGCCACTTTGAAA 57.846 33.333 5.05 0.00 0.00 2.69
284 285 6.757237 TGTATCACAATTGCCACTTTGAAAT 58.243 32.000 5.05 0.00 0.00 2.17
285 286 7.215789 TGTATCACAATTGCCACTTTGAAATT 58.784 30.769 5.05 0.00 0.00 1.82
286 287 7.714377 TGTATCACAATTGCCACTTTGAAATTT 59.286 29.630 5.05 0.00 0.00 1.82
287 288 6.998968 TCACAATTGCCACTTTGAAATTTT 57.001 29.167 5.05 0.00 0.00 1.82
288 289 7.388460 TCACAATTGCCACTTTGAAATTTTT 57.612 28.000 5.05 0.00 0.00 1.94
319 320 8.984764 CCACTGAATGGCAAAATTGATATATTG 58.015 33.333 0.00 0.00 43.24 1.90
320 321 9.537192 CACTGAATGGCAAAATTGATATATTGT 57.463 29.630 0.00 0.00 0.00 2.71
321 322 9.754382 ACTGAATGGCAAAATTGATATATTGTC 57.246 29.630 0.00 0.00 0.00 3.18
322 323 9.752961 CTGAATGGCAAAATTGATATATTGTCA 57.247 29.630 0.00 0.00 41.11 3.58
327 328 8.881743 TGGCAAAATTGATATATTGTCAAAAGC 58.118 29.630 7.15 8.30 38.89 3.51
328 329 9.101655 GGCAAAATTGATATATTGTCAAAAGCT 57.898 29.630 7.15 0.00 38.89 3.74
343 344 7.771183 TGTCAAAAGCTAAGAATGACAAAAGT 58.229 30.769 13.97 0.00 45.17 2.66
344 345 7.701924 TGTCAAAAGCTAAGAATGACAAAAGTG 59.298 33.333 13.97 0.00 45.17 3.16
345 346 7.915397 GTCAAAAGCTAAGAATGACAAAAGTGA 59.085 33.333 10.55 0.00 40.02 3.41
346 347 8.465999 TCAAAAGCTAAGAATGACAAAAGTGAA 58.534 29.630 0.00 0.00 0.00 3.18
347 348 9.086336 CAAAAGCTAAGAATGACAAAAGTGAAA 57.914 29.630 0.00 0.00 0.00 2.69
348 349 9.822185 AAAAGCTAAGAATGACAAAAGTGAAAT 57.178 25.926 0.00 0.00 0.00 2.17
349 350 8.807667 AAGCTAAGAATGACAAAAGTGAAATG 57.192 30.769 0.00 0.00 0.00 2.32
350 351 7.945134 AGCTAAGAATGACAAAAGTGAAATGT 58.055 30.769 0.00 0.00 0.00 2.71
351 352 8.416329 AGCTAAGAATGACAAAAGTGAAATGTT 58.584 29.630 0.00 0.00 0.00 2.71
352 353 9.677567 GCTAAGAATGACAAAAGTGAAATGTTA 57.322 29.630 0.00 0.00 0.00 2.41
366 367 8.045176 AGTGAAATGTTAAATTCTAGAGTGGC 57.955 34.615 0.00 0.00 0.00 5.01
367 368 7.665559 AGTGAAATGTTAAATTCTAGAGTGGCA 59.334 33.333 0.00 0.00 0.00 4.92
368 369 8.462016 GTGAAATGTTAAATTCTAGAGTGGCAT 58.538 33.333 0.00 0.00 0.00 4.40
369 370 9.679661 TGAAATGTTAAATTCTAGAGTGGCATA 57.320 29.630 0.00 0.00 0.00 3.14
372 373 7.553881 TGTTAAATTCTAGAGTGGCATAAGC 57.446 36.000 0.00 0.00 41.10 3.09
373 374 7.109501 TGTTAAATTCTAGAGTGGCATAAGCA 58.890 34.615 0.00 0.00 44.61 3.91
374 375 7.609918 TGTTAAATTCTAGAGTGGCATAAGCAA 59.390 33.333 0.00 0.00 44.61 3.91
375 376 8.458843 GTTAAATTCTAGAGTGGCATAAGCAAA 58.541 33.333 0.00 0.00 44.61 3.68
376 377 6.690194 AATTCTAGAGTGGCATAAGCAAAG 57.310 37.500 0.00 0.00 44.61 2.77
377 378 4.826274 TCTAGAGTGGCATAAGCAAAGT 57.174 40.909 0.00 0.00 44.61 2.66
378 379 4.507710 TCTAGAGTGGCATAAGCAAAGTG 58.492 43.478 0.00 0.00 44.61 3.16
379 380 2.440409 AGAGTGGCATAAGCAAAGTGG 58.560 47.619 0.00 0.00 44.61 4.00
380 381 1.474077 GAGTGGCATAAGCAAAGTGGG 59.526 52.381 0.00 0.00 44.61 4.61
381 382 0.108662 GTGGCATAAGCAAAGTGGGC 60.109 55.000 0.00 0.00 44.61 5.36
382 383 0.541530 TGGCATAAGCAAAGTGGGCA 60.542 50.000 0.00 0.00 44.61 5.36
383 384 0.607620 GGCATAAGCAAAGTGGGCAA 59.392 50.000 0.00 0.00 44.61 4.52
384 385 1.001860 GGCATAAGCAAAGTGGGCAAA 59.998 47.619 0.00 0.00 44.61 3.68
385 386 2.549778 GGCATAAGCAAAGTGGGCAAAA 60.550 45.455 0.00 0.00 44.61 2.44
386 387 3.137533 GCATAAGCAAAGTGGGCAAAAA 58.862 40.909 0.00 0.00 41.58 1.94
387 388 3.058983 GCATAAGCAAAGTGGGCAAAAAC 60.059 43.478 0.00 0.00 41.58 2.43
388 389 4.379652 CATAAGCAAAGTGGGCAAAAACT 58.620 39.130 0.00 0.00 0.00 2.66
389 390 5.537188 CATAAGCAAAGTGGGCAAAAACTA 58.463 37.500 0.00 0.00 0.00 2.24
390 391 3.733443 AGCAAAGTGGGCAAAAACTAG 57.267 42.857 0.00 0.00 0.00 2.57
391 392 3.295973 AGCAAAGTGGGCAAAAACTAGA 58.704 40.909 0.00 0.00 0.00 2.43
392 393 3.319122 AGCAAAGTGGGCAAAAACTAGAG 59.681 43.478 0.00 0.00 0.00 2.43
393 394 3.068165 GCAAAGTGGGCAAAAACTAGAGT 59.932 43.478 0.00 0.00 0.00 3.24
394 395 4.610945 CAAAGTGGGCAAAAACTAGAGTG 58.389 43.478 0.00 0.00 0.00 3.51
395 396 3.857157 AGTGGGCAAAAACTAGAGTGA 57.143 42.857 0.00 0.00 0.00 3.41
396 397 3.477530 AGTGGGCAAAAACTAGAGTGAC 58.522 45.455 0.00 0.00 0.00 3.67
397 398 3.118038 AGTGGGCAAAAACTAGAGTGACA 60.118 43.478 0.00 0.00 0.00 3.58
398 399 3.630312 GTGGGCAAAAACTAGAGTGACAA 59.370 43.478 0.00 0.00 0.00 3.18
399 400 4.097286 GTGGGCAAAAACTAGAGTGACAAA 59.903 41.667 0.00 0.00 0.00 2.83
400 401 4.707448 TGGGCAAAAACTAGAGTGACAAAA 59.293 37.500 0.00 0.00 0.00 2.44
401 402 5.186021 TGGGCAAAAACTAGAGTGACAAAAA 59.814 36.000 0.00 0.00 0.00 1.94
402 403 5.518847 GGGCAAAAACTAGAGTGACAAAAAC 59.481 40.000 0.00 0.00 0.00 2.43
403 404 6.096695 GGCAAAAACTAGAGTGACAAAAACA 58.903 36.000 0.00 0.00 0.00 2.83
404 405 6.756542 GGCAAAAACTAGAGTGACAAAAACAT 59.243 34.615 0.00 0.00 0.00 2.71
405 406 7.277760 GGCAAAAACTAGAGTGACAAAAACATT 59.722 33.333 0.00 0.00 0.00 2.71
406 407 8.655970 GCAAAAACTAGAGTGACAAAAACATTT 58.344 29.630 0.00 0.00 0.00 2.32
433 434 4.448537 TTTTTCTTTATGATGGCCGGTG 57.551 40.909 1.90 0.00 0.00 4.94
434 435 2.799126 TTCTTTATGATGGCCGGTGT 57.201 45.000 1.90 0.00 0.00 4.16
435 436 2.036958 TCTTTATGATGGCCGGTGTG 57.963 50.000 1.90 0.00 0.00 3.82
436 437 1.280710 TCTTTATGATGGCCGGTGTGT 59.719 47.619 1.90 0.00 0.00 3.72
437 438 2.502130 TCTTTATGATGGCCGGTGTGTA 59.498 45.455 1.90 0.00 0.00 2.90
438 439 2.319136 TTATGATGGCCGGTGTGTAC 57.681 50.000 1.90 0.00 0.00 2.90
439 440 0.103390 TATGATGGCCGGTGTGTACG 59.897 55.000 1.90 0.00 0.00 3.67
440 441 1.895020 ATGATGGCCGGTGTGTACGT 61.895 55.000 1.90 0.00 0.00 3.57
441 442 2.047655 ATGGCCGGTGTGTACGTG 60.048 61.111 1.90 0.00 0.00 4.49
442 443 2.495366 GATGGCCGGTGTGTACGTGA 62.495 60.000 1.90 0.00 0.00 4.35
443 444 1.895020 ATGGCCGGTGTGTACGTGAT 61.895 55.000 1.90 0.00 0.00 3.06
444 445 1.375013 GGCCGGTGTGTACGTGATT 60.375 57.895 1.90 0.00 0.00 2.57
445 446 0.952010 GGCCGGTGTGTACGTGATTT 60.952 55.000 1.90 0.00 0.00 2.17
446 447 0.165079 GCCGGTGTGTACGTGATTTG 59.835 55.000 1.90 0.00 0.00 2.32
447 448 1.504359 CCGGTGTGTACGTGATTTGT 58.496 50.000 0.00 0.00 0.00 2.83
448 449 2.674954 CCGGTGTGTACGTGATTTGTA 58.325 47.619 0.00 0.00 0.00 2.41
449 450 2.409378 CCGGTGTGTACGTGATTTGTAC 59.591 50.000 0.00 0.00 41.97 2.90
450 451 3.311106 CGGTGTGTACGTGATTTGTACT 58.689 45.455 0.00 0.00 42.09 2.73
451 452 4.475028 CGGTGTGTACGTGATTTGTACTA 58.525 43.478 0.00 0.00 42.09 1.82
452 453 5.097529 CGGTGTGTACGTGATTTGTACTAT 58.902 41.667 0.00 0.00 42.09 2.12
453 454 6.257423 CGGTGTGTACGTGATTTGTACTATA 58.743 40.000 0.00 0.00 42.09 1.31
454 455 6.746822 CGGTGTGTACGTGATTTGTACTATAA 59.253 38.462 0.00 0.00 42.09 0.98
455 456 7.273164 CGGTGTGTACGTGATTTGTACTATAAA 59.727 37.037 0.00 0.00 42.09 1.40
456 457 8.924691 GGTGTGTACGTGATTTGTACTATAAAA 58.075 33.333 0.00 0.00 42.09 1.52
491 492 9.962783 ACTCCAGTAAATAAGACATCGTATTAC 57.037 33.333 1.27 0.00 31.88 1.89
492 493 9.114965 CTCCAGTAAATAAGACATCGTATTACG 57.885 37.037 9.95 9.95 44.19 3.18
529 530 9.659830 GTTGTACGAATTTCTGTTTCTGTTAAT 57.340 29.630 0.00 0.00 0.00 1.40
530 531 9.872757 TTGTACGAATTTCTGTTTCTGTTAATC 57.127 29.630 0.00 0.00 0.00 1.75
531 532 9.268268 TGTACGAATTTCTGTTTCTGTTAATCT 57.732 29.630 0.00 0.00 0.00 2.40
535 536 7.750903 CGAATTTCTGTTTCTGTTAATCTTCCC 59.249 37.037 0.00 0.00 0.00 3.97
536 537 6.894339 TTTCTGTTTCTGTTAATCTTCCCC 57.106 37.500 0.00 0.00 0.00 4.81
537 538 4.918588 TCTGTTTCTGTTAATCTTCCCCC 58.081 43.478 0.00 0.00 0.00 5.40
538 539 3.681593 TGTTTCTGTTAATCTTCCCCCG 58.318 45.455 0.00 0.00 0.00 5.73
539 540 3.073356 TGTTTCTGTTAATCTTCCCCCGT 59.927 43.478 0.00 0.00 0.00 5.28
541 542 5.221884 TGTTTCTGTTAATCTTCCCCCGTTA 60.222 40.000 0.00 0.00 0.00 3.18
542 543 5.502089 TTCTGTTAATCTTCCCCCGTTAA 57.498 39.130 0.00 0.00 0.00 2.01
543 544 5.502089 TCTGTTAATCTTCCCCCGTTAAA 57.498 39.130 0.00 0.00 0.00 1.52
544 545 5.878627 TCTGTTAATCTTCCCCCGTTAAAA 58.121 37.500 0.00 0.00 0.00 1.52
545 546 6.305411 TCTGTTAATCTTCCCCCGTTAAAAA 58.695 36.000 0.00 0.00 0.00 1.94
565 566 2.368655 AAATGAATGTTTGCTCGGCC 57.631 45.000 0.00 0.00 0.00 6.13
566 567 1.549203 AATGAATGTTTGCTCGGCCT 58.451 45.000 0.00 0.00 0.00 5.19
567 568 0.813184 ATGAATGTTTGCTCGGCCTG 59.187 50.000 0.00 0.00 0.00 4.85
568 569 1.153958 GAATGTTTGCTCGGCCTGC 60.154 57.895 0.00 5.84 0.00 4.85
569 570 2.548127 GAATGTTTGCTCGGCCTGCC 62.548 60.000 13.82 0.00 0.00 4.85
570 571 3.574074 ATGTTTGCTCGGCCTGCCT 62.574 57.895 13.82 0.00 0.00 4.75
571 572 3.741476 GTTTGCTCGGCCTGCCTG 61.741 66.667 13.82 0.24 0.00 4.85
577 578 1.227674 CTCGGCCTGCCTGGTATTC 60.228 63.158 6.60 0.00 38.35 1.75
578 579 1.971505 CTCGGCCTGCCTGGTATTCA 61.972 60.000 6.60 0.00 38.35 2.57
579 580 1.819632 CGGCCTGCCTGGTATTCAC 60.820 63.158 6.60 0.00 38.35 3.18
580 581 1.302949 GGCCTGCCTGGTATTCACA 59.697 57.895 0.00 0.00 38.35 3.58
582 583 0.035056 GCCTGCCTGGTATTCACAGT 60.035 55.000 0.00 0.00 38.35 3.55
583 584 1.742761 CCTGCCTGGTATTCACAGTG 58.257 55.000 0.00 0.00 34.16 3.66
585 586 0.327924 TGCCTGGTATTCACAGTGGG 59.672 55.000 0.00 0.00 34.16 4.61
586 587 0.394352 GCCTGGTATTCACAGTGGGG 60.394 60.000 0.00 0.00 34.16 4.96
587 588 0.255890 CCTGGTATTCACAGTGGGGG 59.744 60.000 0.00 0.00 34.16 5.40
588 589 1.285280 CTGGTATTCACAGTGGGGGA 58.715 55.000 0.00 0.00 0.00 4.81
590 591 1.633432 TGGTATTCACAGTGGGGGAAG 59.367 52.381 0.00 0.00 0.00 3.46
591 592 1.913419 GGTATTCACAGTGGGGGAAGA 59.087 52.381 0.00 0.00 0.00 2.87
592 593 2.509964 GGTATTCACAGTGGGGGAAGAT 59.490 50.000 0.00 0.00 0.00 2.40
594 595 0.038166 TTCACAGTGGGGGAAGATGC 59.962 55.000 0.00 0.00 0.00 3.91
595 596 1.746615 CACAGTGGGGGAAGATGCG 60.747 63.158 0.00 0.00 0.00 4.73
596 597 1.918293 ACAGTGGGGGAAGATGCGA 60.918 57.895 0.00 0.00 0.00 5.10
598 599 2.511600 GTGGGGGAAGATGCGACG 60.512 66.667 0.00 0.00 0.00 5.12
600 601 4.162690 GGGGGAAGATGCGACGCT 62.163 66.667 22.08 6.44 0.00 5.07
601 602 2.792947 GGGGGAAGATGCGACGCTA 61.793 63.158 22.08 7.92 0.00 4.26
605 606 0.595310 GGAAGATGCGACGCTAGTCC 60.595 60.000 22.08 17.15 44.28 3.85
607 608 1.602851 GAAGATGCGACGCTAGTCCTA 59.397 52.381 22.08 0.00 44.28 2.94
608 609 0.945813 AGATGCGACGCTAGTCCTAC 59.054 55.000 22.08 3.62 44.28 3.18
609 610 0.040246 GATGCGACGCTAGTCCTACC 60.040 60.000 22.08 0.00 44.28 3.18
610 611 1.453762 ATGCGACGCTAGTCCTACCC 61.454 60.000 22.08 0.00 44.28 3.69
613 614 0.463295 CGACGCTAGTCCTACCCTCA 60.463 60.000 0.00 0.00 44.28 3.86
618 619 1.621622 GCTAGTCCTACCCTCAACCCA 60.622 57.143 0.00 0.00 0.00 4.51
642 643 1.705337 GACCGACCGATAACGACCGA 61.705 60.000 7.65 0.00 42.66 4.69
689 691 2.796651 GCGCCCAGAGCAAAGATG 59.203 61.111 0.00 0.00 44.04 2.90
780 985 2.909965 ACGCACGCCACCCAAATT 60.910 55.556 0.00 0.00 0.00 1.82
965 2509 2.066393 CAGCATCTCTCCCCCGGAA 61.066 63.158 0.73 0.00 0.00 4.30
1440 2984 0.781278 TCCGGGAGATTTTTGGGGTT 59.219 50.000 0.00 0.00 0.00 4.11
1449 2993 5.899547 GGAGATTTTTGGGGTTGGATTCTAT 59.100 40.000 0.00 0.00 0.00 1.98
1494 3038 2.041115 TGCGGAGGAGACAGAGTCG 61.041 63.158 0.00 0.00 37.67 4.18
1576 3120 5.693814 ACGGAAATAGTACGGACGATAATC 58.306 41.667 0.00 0.00 0.00 1.75
1589 3133 1.523758 GATAATCCGGCTCCGCAATT 58.476 50.000 0.00 7.45 38.24 2.32
1680 3224 0.835971 TGCTCCCTAAGAGTGCCACA 60.836 55.000 0.00 0.00 45.21 4.17
1683 3227 2.114616 CTCCCTAAGAGTGCCACATCT 58.885 52.381 0.00 0.00 37.87 2.90
1734 3278 3.759581 CCTTGTGGATGATTATGGAGGG 58.240 50.000 0.00 0.00 34.57 4.30
1879 3423 2.799371 CGCAGACCGTCTACCCTC 59.201 66.667 0.00 0.00 0.00 4.30
1909 3453 9.823647 TCTCTGACCTTTATGAGATATTTGTTC 57.176 33.333 0.00 0.00 31.53 3.18
2079 3623 2.102588 AGGAAGACGCCGCATTAATACT 59.897 45.455 0.00 0.00 0.00 2.12
2348 3892 4.202441 AGTGATAACAATGAGGTGCCATC 58.798 43.478 0.00 0.00 0.00 3.51
2448 3992 5.808030 TGGTTTTTCATCTTTGTCGAAAACC 59.192 36.000 17.20 17.20 38.11 3.27
2499 4043 5.760743 GGCTCCTTATAAAACTCCAGTGATC 59.239 44.000 0.00 0.00 0.00 2.92
2634 4178 1.142748 AGCAGAGAAGATTCGGGCG 59.857 57.895 0.00 0.00 0.00 6.13
2764 4308 2.603075 AGCTCCTTGGGCAACATTTA 57.397 45.000 0.00 0.00 39.74 1.40
3074 4618 8.197439 TCATACCATCTGTACAGTACATTCTTG 58.803 37.037 21.99 11.49 38.15 3.02
3077 4621 6.874134 ACCATCTGTACAGTACATTCTTGTTC 59.126 38.462 21.99 0.00 38.15 3.18
3078 4622 7.099764 CCATCTGTACAGTACATTCTTGTTCT 58.900 38.462 21.99 0.00 38.15 3.01
3079 4623 7.604164 CCATCTGTACAGTACATTCTTGTTCTT 59.396 37.037 21.99 0.00 38.15 2.52
3080 4624 9.639601 CATCTGTACAGTACATTCTTGTTCTTA 57.360 33.333 21.99 0.00 38.15 2.10
3081 4625 9.640963 ATCTGTACAGTACATTCTTGTTCTTAC 57.359 33.333 21.99 0.00 38.15 2.34
3197 4741 7.487484 TGTGTTTGATCTTCTGCACATAAAAA 58.513 30.769 0.00 0.00 32.79 1.94
3253 4797 8.413229 TGCTTTAGTAATTTATTGATTCCCAGC 58.587 33.333 0.00 0.00 0.00 4.85
3259 4803 9.866655 AGTAATTTATTGATTCCCAGCAAGATA 57.133 29.630 0.00 0.00 0.00 1.98
3261 4805 6.639632 TTTATTGATTCCCAGCAAGATAGC 57.360 37.500 0.00 0.00 0.00 2.97
3263 4807 3.939740 TGATTCCCAGCAAGATAGCTT 57.060 42.857 0.00 0.00 43.70 3.74
3303 4847 4.355543 TCTGAGTGAAACACTTTGTTGC 57.644 40.909 5.88 0.00 45.44 4.17
3398 4942 7.147976 AGAGTTGGTGATGCAACTTATTTTTC 58.852 34.615 0.00 0.00 41.19 2.29
3421 4965 4.522022 CCTTCTGGGATCATATTTGCCTTC 59.478 45.833 0.00 0.00 37.23 3.46
3457 5001 7.285401 ACATTTCGAGATTAACCAGGCATATTT 59.715 33.333 0.00 0.00 0.00 1.40
3474 5022 7.211966 GCATATTTTGGCATAGATCTTCTGT 57.788 36.000 0.00 0.00 0.00 3.41
3475 5023 7.082602 GCATATTTTGGCATAGATCTTCTGTG 58.917 38.462 0.00 0.00 38.45 3.66
3516 5071 2.205022 AAGTAGGCAGCAGCATCAAA 57.795 45.000 2.65 0.00 44.61 2.69
3524 5079 3.987868 GGCAGCAGCATCAAATTGATATG 59.012 43.478 8.29 11.22 44.61 1.78
3578 5133 5.516696 ACATCTGTCTCACGATTACAAATCG 59.483 40.000 17.80 17.80 46.02 3.34
3600 5155 4.923281 CGATGTGAAAAAGAAAACCATCCC 59.077 41.667 0.00 0.00 0.00 3.85
3733 5288 3.191371 GGTTTGTGTAGAAATCTGGCTGG 59.809 47.826 0.00 0.00 0.00 4.85
3826 5381 1.533338 CCGATGCAAATTCAGCAGAGC 60.533 52.381 10.70 3.50 46.36 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 9.883142 ACAAAGAAACATCATCCAAAAAGTAAA 57.117 25.926 0.00 0.00 0.00 2.01
4 5 7.437862 GCACAAAGAAACATCATCCAAAAAGTA 59.562 33.333 0.00 0.00 0.00 2.24
5 6 6.258507 GCACAAAGAAACATCATCCAAAAAGT 59.741 34.615 0.00 0.00 0.00 2.66
6 7 6.258287 TGCACAAAGAAACATCATCCAAAAAG 59.742 34.615 0.00 0.00 0.00 2.27
7 8 6.111382 TGCACAAAGAAACATCATCCAAAAA 58.889 32.000 0.00 0.00 0.00 1.94
8 9 5.668471 TGCACAAAGAAACATCATCCAAAA 58.332 33.333 0.00 0.00 0.00 2.44
9 10 5.273674 TGCACAAAGAAACATCATCCAAA 57.726 34.783 0.00 0.00 0.00 3.28
10 11 4.933505 TGCACAAAGAAACATCATCCAA 57.066 36.364 0.00 0.00 0.00 3.53
11 12 4.933505 TTGCACAAAGAAACATCATCCA 57.066 36.364 0.00 0.00 0.00 3.41
22 23 7.335924 AGTAAAACACTAGTCTTTGCACAAAGA 59.664 33.333 19.27 19.27 43.88 2.52
23 24 7.472543 AGTAAAACACTAGTCTTTGCACAAAG 58.527 34.615 15.45 15.45 41.43 2.77
24 25 7.385778 AGTAAAACACTAGTCTTTGCACAAA 57.614 32.000 13.93 0.00 34.98 2.83
25 26 6.995511 AGTAAAACACTAGTCTTTGCACAA 57.004 33.333 13.93 0.00 34.98 3.33
26 27 8.671384 AATAGTAAAACACTAGTCTTTGCACA 57.329 30.769 13.93 5.46 43.01 4.57
27 28 9.382244 CAAATAGTAAAACACTAGTCTTTGCAC 57.618 33.333 13.93 8.34 43.01 4.57
28 29 9.116067 ACAAATAGTAAAACACTAGTCTTTGCA 57.884 29.630 13.93 0.00 43.01 4.08
29 30 9.946165 AACAAATAGTAAAACACTAGTCTTTGC 57.054 29.630 8.96 7.88 43.01 3.68
49 50 8.700973 ACACCAACCTAATAAAACTGAACAAAT 58.299 29.630 0.00 0.00 0.00 2.32
50 51 7.976734 CACACCAACCTAATAAAACTGAACAAA 59.023 33.333 0.00 0.00 0.00 2.83
51 52 7.122948 ACACACCAACCTAATAAAACTGAACAA 59.877 33.333 0.00 0.00 0.00 2.83
52 53 6.603997 ACACACCAACCTAATAAAACTGAACA 59.396 34.615 0.00 0.00 0.00 3.18
53 54 7.034685 ACACACCAACCTAATAAAACTGAAC 57.965 36.000 0.00 0.00 0.00 3.18
54 55 8.788806 CATACACACCAACCTAATAAAACTGAA 58.211 33.333 0.00 0.00 0.00 3.02
55 56 7.940137 ACATACACACCAACCTAATAAAACTGA 59.060 33.333 0.00 0.00 0.00 3.41
56 57 8.106247 ACATACACACCAACCTAATAAAACTG 57.894 34.615 0.00 0.00 0.00 3.16
57 58 8.700439 AACATACACACCAACCTAATAAAACT 57.300 30.769 0.00 0.00 0.00 2.66
58 59 9.752961 AAAACATACACACCAACCTAATAAAAC 57.247 29.630 0.00 0.00 0.00 2.43
59 60 9.968870 GAAAACATACACACCAACCTAATAAAA 57.031 29.630 0.00 0.00 0.00 1.52
60 61 9.357161 AGAAAACATACACACCAACCTAATAAA 57.643 29.630 0.00 0.00 0.00 1.40
61 62 8.927675 AGAAAACATACACACCAACCTAATAA 57.072 30.769 0.00 0.00 0.00 1.40
62 63 8.927675 AAGAAAACATACACACCAACCTAATA 57.072 30.769 0.00 0.00 0.00 0.98
63 64 7.833285 AAGAAAACATACACACCAACCTAAT 57.167 32.000 0.00 0.00 0.00 1.73
64 65 7.648039 AAAGAAAACATACACACCAACCTAA 57.352 32.000 0.00 0.00 0.00 2.69
65 66 7.446013 CCTAAAGAAAACATACACACCAACCTA 59.554 37.037 0.00 0.00 0.00 3.08
66 67 6.264518 CCTAAAGAAAACATACACACCAACCT 59.735 38.462 0.00 0.00 0.00 3.50
67 68 6.443792 CCTAAAGAAAACATACACACCAACC 58.556 40.000 0.00 0.00 0.00 3.77
68 69 6.263617 TCCCTAAAGAAAACATACACACCAAC 59.736 38.462 0.00 0.00 0.00 3.77
69 70 6.366340 TCCCTAAAGAAAACATACACACCAA 58.634 36.000 0.00 0.00 0.00 3.67
70 71 5.942961 TCCCTAAAGAAAACATACACACCA 58.057 37.500 0.00 0.00 0.00 4.17
71 72 6.887626 TTCCCTAAAGAAAACATACACACC 57.112 37.500 0.00 0.00 0.00 4.16
72 73 9.758651 AATTTTCCCTAAAGAAAACATACACAC 57.241 29.630 1.84 0.00 45.72 3.82
82 83 9.847706 GCAAAAACAAAATTTTCCCTAAAGAAA 57.152 25.926 0.00 0.00 33.98 2.52
83 84 8.462811 GGCAAAAACAAAATTTTCCCTAAAGAA 58.537 29.630 0.00 0.00 29.19 2.52
84 85 7.611855 TGGCAAAAACAAAATTTTCCCTAAAGA 59.388 29.630 0.00 0.00 32.38 2.52
85 86 7.766283 TGGCAAAAACAAAATTTTCCCTAAAG 58.234 30.769 0.00 0.00 32.38 1.85
86 87 7.703058 TGGCAAAAACAAAATTTTCCCTAAA 57.297 28.000 0.00 0.00 32.38 1.85
87 88 7.888250 ATGGCAAAAACAAAATTTTCCCTAA 57.112 28.000 0.00 0.00 32.38 2.69
88 89 7.888250 AATGGCAAAAACAAAATTTTCCCTA 57.112 28.000 0.00 0.00 32.38 3.53
89 90 6.788598 AATGGCAAAAACAAAATTTTCCCT 57.211 29.167 0.00 0.00 32.38 4.20
90 91 7.840342 AAAATGGCAAAAACAAAATTTTCCC 57.160 28.000 0.00 0.00 31.87 3.97
98 99 8.659491 GGCAAAAATTAAAATGGCAAAAACAAA 58.341 25.926 0.00 0.00 38.16 2.83
99 100 7.278646 GGGCAAAAATTAAAATGGCAAAAACAA 59.721 29.630 0.00 0.00 39.84 2.83
100 101 6.758416 GGGCAAAAATTAAAATGGCAAAAACA 59.242 30.769 0.00 0.00 39.84 2.83
101 102 6.758416 TGGGCAAAAATTAAAATGGCAAAAAC 59.242 30.769 0.00 0.00 39.84 2.43
102 103 6.758416 GTGGGCAAAAATTAAAATGGCAAAAA 59.242 30.769 0.00 0.00 39.84 1.94
103 104 6.097412 AGTGGGCAAAAATTAAAATGGCAAAA 59.903 30.769 0.00 0.00 39.84 2.44
104 105 5.595952 AGTGGGCAAAAATTAAAATGGCAAA 59.404 32.000 0.00 0.00 39.84 3.68
105 106 5.136105 AGTGGGCAAAAATTAAAATGGCAA 58.864 33.333 0.00 0.00 39.84 4.52
106 107 4.723309 AGTGGGCAAAAATTAAAATGGCA 58.277 34.783 0.00 0.00 39.84 4.92
107 108 5.703978 AAGTGGGCAAAAATTAAAATGGC 57.296 34.783 0.00 0.00 37.60 4.40
108 109 8.389779 AGTAAAGTGGGCAAAAATTAAAATGG 57.610 30.769 0.00 0.00 0.00 3.16
112 113 8.994170 GCATAAGTAAAGTGGGCAAAAATTAAA 58.006 29.630 0.00 0.00 0.00 1.52
113 114 7.604545 GGCATAAGTAAAGTGGGCAAAAATTAA 59.395 33.333 0.00 0.00 0.00 1.40
114 115 7.100409 GGCATAAGTAAAGTGGGCAAAAATTA 58.900 34.615 0.00 0.00 0.00 1.40
115 116 5.937540 GGCATAAGTAAAGTGGGCAAAAATT 59.062 36.000 0.00 0.00 0.00 1.82
116 117 5.012561 TGGCATAAGTAAAGTGGGCAAAAAT 59.987 36.000 0.00 0.00 0.00 1.82
117 118 4.345257 TGGCATAAGTAAAGTGGGCAAAAA 59.655 37.500 0.00 0.00 0.00 1.94
118 119 3.898123 TGGCATAAGTAAAGTGGGCAAAA 59.102 39.130 0.00 0.00 0.00 2.44
119 120 3.257127 GTGGCATAAGTAAAGTGGGCAAA 59.743 43.478 0.00 0.00 32.49 3.68
120 121 2.823154 GTGGCATAAGTAAAGTGGGCAA 59.177 45.455 0.00 0.00 32.49 4.52
121 122 2.041081 AGTGGCATAAGTAAAGTGGGCA 59.959 45.455 0.00 0.00 0.00 5.36
122 123 2.683362 GAGTGGCATAAGTAAAGTGGGC 59.317 50.000 0.00 0.00 0.00 5.36
123 124 4.222124 AGAGTGGCATAAGTAAAGTGGG 57.778 45.455 0.00 0.00 0.00 4.61
124 125 6.222038 TCTAGAGTGGCATAAGTAAAGTGG 57.778 41.667 0.00 0.00 0.00 4.00
125 126 8.723942 AATTCTAGAGTGGCATAAGTAAAGTG 57.276 34.615 0.00 0.00 0.00 3.16
126 127 9.167311 CAAATTCTAGAGTGGCATAAGTAAAGT 57.833 33.333 0.00 0.00 0.00 2.66
127 128 9.383519 TCAAATTCTAGAGTGGCATAAGTAAAG 57.616 33.333 0.00 0.00 0.00 1.85
128 129 9.905713 ATCAAATTCTAGAGTGGCATAAGTAAA 57.094 29.630 0.00 0.00 0.00 2.01
131 132 9.717942 GATATCAAATTCTAGAGTGGCATAAGT 57.282 33.333 0.00 0.00 0.00 2.24
132 133 9.941325 AGATATCAAATTCTAGAGTGGCATAAG 57.059 33.333 5.32 0.00 0.00 1.73
133 134 9.935241 GAGATATCAAATTCTAGAGTGGCATAA 57.065 33.333 5.32 0.00 0.00 1.90
134 135 9.093458 TGAGATATCAAATTCTAGAGTGGCATA 57.907 33.333 5.32 0.00 0.00 3.14
135 136 7.877097 GTGAGATATCAAATTCTAGAGTGGCAT 59.123 37.037 5.32 0.00 0.00 4.40
136 137 7.212976 GTGAGATATCAAATTCTAGAGTGGCA 58.787 38.462 5.32 0.00 0.00 4.92
137 138 6.648725 GGTGAGATATCAAATTCTAGAGTGGC 59.351 42.308 5.32 0.00 0.00 5.01
138 139 7.961351 AGGTGAGATATCAAATTCTAGAGTGG 58.039 38.462 5.32 0.00 0.00 4.00
139 140 9.829507 AAAGGTGAGATATCAAATTCTAGAGTG 57.170 33.333 5.32 0.00 0.00 3.51
140 141 9.829507 CAAAGGTGAGATATCAAATTCTAGAGT 57.170 33.333 5.32 0.00 0.00 3.24
141 142 8.772705 GCAAAGGTGAGATATCAAATTCTAGAG 58.227 37.037 5.32 0.00 0.00 2.43
142 143 7.716998 GGCAAAGGTGAGATATCAAATTCTAGA 59.283 37.037 5.32 0.00 0.00 2.43
143 144 7.500227 TGGCAAAGGTGAGATATCAAATTCTAG 59.500 37.037 5.32 0.00 0.00 2.43
144 145 7.283127 GTGGCAAAGGTGAGATATCAAATTCTA 59.717 37.037 5.32 0.00 0.00 2.10
145 146 6.096001 GTGGCAAAGGTGAGATATCAAATTCT 59.904 38.462 5.32 0.00 0.00 2.40
146 147 6.096001 AGTGGCAAAGGTGAGATATCAAATTC 59.904 38.462 5.32 0.00 0.00 2.17
147 148 5.954150 AGTGGCAAAGGTGAGATATCAAATT 59.046 36.000 5.32 0.00 0.00 1.82
148 149 5.513233 AGTGGCAAAGGTGAGATATCAAAT 58.487 37.500 5.32 0.00 0.00 2.32
149 150 4.922206 AGTGGCAAAGGTGAGATATCAAA 58.078 39.130 5.32 0.00 0.00 2.69
150 151 4.225942 AGAGTGGCAAAGGTGAGATATCAA 59.774 41.667 5.32 0.00 0.00 2.57
151 152 3.776969 AGAGTGGCAAAGGTGAGATATCA 59.223 43.478 5.32 0.00 0.00 2.15
152 153 4.414337 AGAGTGGCAAAGGTGAGATATC 57.586 45.455 0.00 0.00 0.00 1.63
153 154 4.851639 AAGAGTGGCAAAGGTGAGATAT 57.148 40.909 0.00 0.00 0.00 1.63
154 155 5.248477 AGTTAAGAGTGGCAAAGGTGAGATA 59.752 40.000 0.00 0.00 0.00 1.98
155 156 4.042187 AGTTAAGAGTGGCAAAGGTGAGAT 59.958 41.667 0.00 0.00 0.00 2.75
156 157 3.391296 AGTTAAGAGTGGCAAAGGTGAGA 59.609 43.478 0.00 0.00 0.00 3.27
157 158 3.744660 AGTTAAGAGTGGCAAAGGTGAG 58.255 45.455 0.00 0.00 0.00 3.51
158 159 3.857157 AGTTAAGAGTGGCAAAGGTGA 57.143 42.857 0.00 0.00 0.00 4.02
159 160 4.918810 AAAGTTAAGAGTGGCAAAGGTG 57.081 40.909 0.00 0.00 0.00 4.00
160 161 4.953579 TCAAAAGTTAAGAGTGGCAAAGGT 59.046 37.500 0.00 0.00 0.00 3.50
161 162 5.163561 TGTCAAAAGTTAAGAGTGGCAAAGG 60.164 40.000 0.00 0.00 0.00 3.11
162 163 5.890334 TGTCAAAAGTTAAGAGTGGCAAAG 58.110 37.500 0.00 0.00 0.00 2.77
163 164 5.906113 TGTCAAAAGTTAAGAGTGGCAAA 57.094 34.783 0.00 0.00 0.00 3.68
164 165 5.906113 TTGTCAAAAGTTAAGAGTGGCAA 57.094 34.783 0.00 0.00 31.76 4.52
165 166 6.544197 TGTATTGTCAAAAGTTAAGAGTGGCA 59.456 34.615 0.00 0.00 0.00 4.92
166 167 6.966021 TGTATTGTCAAAAGTTAAGAGTGGC 58.034 36.000 0.00 0.00 0.00 5.01
167 168 8.783093 TGATGTATTGTCAAAAGTTAAGAGTGG 58.217 33.333 0.00 0.00 0.00 4.00
168 169 9.599322 GTGATGTATTGTCAAAAGTTAAGAGTG 57.401 33.333 0.00 0.00 0.00 3.51
169 170 9.337396 TGTGATGTATTGTCAAAAGTTAAGAGT 57.663 29.630 0.00 0.00 0.00 3.24
174 175 9.190858 GCATTTGTGATGTATTGTCAAAAGTTA 57.809 29.630 0.00 0.00 32.99 2.24
175 176 7.171337 GGCATTTGTGATGTATTGTCAAAAGTT 59.829 33.333 0.00 0.00 32.99 2.66
176 177 6.646240 GGCATTTGTGATGTATTGTCAAAAGT 59.354 34.615 0.00 0.00 32.99 2.66
177 178 6.645827 TGGCATTTGTGATGTATTGTCAAAAG 59.354 34.615 0.00 0.00 32.99 2.27
178 179 6.519382 TGGCATTTGTGATGTATTGTCAAAA 58.481 32.000 0.00 0.00 32.99 2.44
179 180 6.094193 TGGCATTTGTGATGTATTGTCAAA 57.906 33.333 0.00 0.00 33.61 2.69
180 181 5.718724 TGGCATTTGTGATGTATTGTCAA 57.281 34.783 0.00 0.00 0.00 3.18
181 182 5.918426 ATGGCATTTGTGATGTATTGTCA 57.082 34.783 0.00 0.00 0.00 3.58
182 183 6.331845 TGAATGGCATTTGTGATGTATTGTC 58.668 36.000 14.93 0.00 0.00 3.18
183 184 6.071221 ACTGAATGGCATTTGTGATGTATTGT 60.071 34.615 14.93 0.00 0.00 2.71
184 185 6.254804 CACTGAATGGCATTTGTGATGTATTG 59.745 38.462 27.88 10.15 32.55 1.90
185 186 6.334989 CACTGAATGGCATTTGTGATGTATT 58.665 36.000 27.88 2.06 32.55 1.89
186 187 5.163488 CCACTGAATGGCATTTGTGATGTAT 60.163 40.000 30.83 5.08 43.24 2.29
187 188 4.158209 CCACTGAATGGCATTTGTGATGTA 59.842 41.667 30.83 8.86 43.24 2.29
188 189 3.056393 CCACTGAATGGCATTTGTGATGT 60.056 43.478 30.83 16.27 43.24 3.06
189 190 3.517602 CCACTGAATGGCATTTGTGATG 58.482 45.455 30.83 19.66 43.24 3.07
190 191 3.880047 CCACTGAATGGCATTTGTGAT 57.120 42.857 30.83 7.64 43.24 3.06
201 202 7.437793 AAATTATGGTTTTTGCCACTGAATG 57.562 32.000 0.00 0.00 41.94 2.67
202 203 8.462589 AAAAATTATGGTTTTTGCCACTGAAT 57.537 26.923 2.89 0.00 41.94 2.57
203 204 7.554118 TGAAAAATTATGGTTTTTGCCACTGAA 59.446 29.630 7.18 0.00 40.35 3.02
204 205 7.050377 TGAAAAATTATGGTTTTTGCCACTGA 58.950 30.769 7.18 0.00 40.35 3.41
205 206 7.256756 TGAAAAATTATGGTTTTTGCCACTG 57.743 32.000 7.18 0.00 40.35 3.66
206 207 8.462589 AATGAAAAATTATGGTTTTTGCCACT 57.537 26.923 7.18 0.00 40.35 4.00
207 208 9.179552 GAAATGAAAAATTATGGTTTTTGCCAC 57.820 29.630 7.18 0.00 40.35 5.01
208 209 8.906867 TGAAATGAAAAATTATGGTTTTTGCCA 58.093 25.926 7.18 0.00 40.35 4.92
209 210 9.179552 GTGAAATGAAAAATTATGGTTTTTGCC 57.820 29.630 7.18 0.00 40.35 4.52
210 211 9.949174 AGTGAAATGAAAAATTATGGTTTTTGC 57.051 25.926 7.18 0.00 40.35 3.68
215 216 9.949174 GCAAAAGTGAAATGAAAAATTATGGTT 57.051 25.926 0.00 0.00 0.00 3.67
216 217 8.567104 GGCAAAAGTGAAATGAAAAATTATGGT 58.433 29.630 0.00 0.00 0.00 3.55
217 218 8.566260 TGGCAAAAGTGAAATGAAAAATTATGG 58.434 29.630 0.00 0.00 0.00 2.74
218 219 9.384682 GTGGCAAAAGTGAAATGAAAAATTATG 57.615 29.630 0.00 0.00 0.00 1.90
219 220 9.341078 AGTGGCAAAAGTGAAATGAAAAATTAT 57.659 25.926 0.00 0.00 0.00 1.28
220 221 8.729805 AGTGGCAAAAGTGAAATGAAAAATTA 57.270 26.923 0.00 0.00 0.00 1.40
221 222 7.553760 AGAGTGGCAAAAGTGAAATGAAAAATT 59.446 29.630 0.00 0.00 0.00 1.82
222 223 7.049754 AGAGTGGCAAAAGTGAAATGAAAAAT 58.950 30.769 0.00 0.00 0.00 1.82
223 224 6.405538 AGAGTGGCAAAAGTGAAATGAAAAA 58.594 32.000 0.00 0.00 0.00 1.94
224 225 5.976458 AGAGTGGCAAAAGTGAAATGAAAA 58.024 33.333 0.00 0.00 0.00 2.29
225 226 5.596836 AGAGTGGCAAAAGTGAAATGAAA 57.403 34.783 0.00 0.00 0.00 2.69
226 227 5.596836 AAGAGTGGCAAAAGTGAAATGAA 57.403 34.783 0.00 0.00 0.00 2.57
227 228 6.321181 ACTTAAGAGTGGCAAAAGTGAAATGA 59.679 34.615 10.09 0.00 33.99 2.57
228 229 6.507023 ACTTAAGAGTGGCAAAAGTGAAATG 58.493 36.000 10.09 0.00 33.99 2.32
229 230 6.715347 ACTTAAGAGTGGCAAAAGTGAAAT 57.285 33.333 10.09 0.00 33.99 2.17
230 231 6.524101 AACTTAAGAGTGGCAAAAGTGAAA 57.476 33.333 10.09 0.00 35.91 2.69
231 232 6.524101 AAACTTAAGAGTGGCAAAAGTGAA 57.476 33.333 10.09 0.00 35.91 3.18
232 233 6.329496 CAAAACTTAAGAGTGGCAAAAGTGA 58.671 36.000 10.09 0.00 35.91 3.41
233 234 5.005682 GCAAAACTTAAGAGTGGCAAAAGTG 59.994 40.000 10.09 0.00 35.91 3.16
234 235 5.109210 GCAAAACTTAAGAGTGGCAAAAGT 58.891 37.500 10.09 0.00 35.91 2.66
235 236 5.108517 TGCAAAACTTAAGAGTGGCAAAAG 58.891 37.500 10.09 0.00 36.17 2.27
236 237 5.078411 TGCAAAACTTAAGAGTGGCAAAA 57.922 34.783 10.09 0.00 36.17 2.44
237 238 4.727507 TGCAAAACTTAAGAGTGGCAAA 57.272 36.364 10.09 0.00 36.17 3.68
238 239 4.727507 TTGCAAAACTTAAGAGTGGCAA 57.272 36.364 16.19 16.19 41.66 4.52
239 240 4.099266 ACATTGCAAAACTTAAGAGTGGCA 59.901 37.500 10.09 8.68 36.84 4.92
240 241 4.620982 ACATTGCAAAACTTAAGAGTGGC 58.379 39.130 10.09 6.06 35.91 5.01
241 242 7.538678 GTGATACATTGCAAAACTTAAGAGTGG 59.461 37.037 10.09 0.00 35.91 4.00
242 243 8.075574 TGTGATACATTGCAAAACTTAAGAGTG 58.924 33.333 10.09 5.07 35.91 3.51
243 244 8.165239 TGTGATACATTGCAAAACTTAAGAGT 57.835 30.769 10.09 0.00 37.87 3.24
244 245 9.630098 ATTGTGATACATTGCAAAACTTAAGAG 57.370 29.630 10.09 0.00 0.00 2.85
245 246 9.979578 AATTGTGATACATTGCAAAACTTAAGA 57.020 25.926 10.09 0.00 0.00 2.10
247 248 8.494347 GCAATTGTGATACATTGCAAAACTTAA 58.506 29.630 1.71 0.00 39.78 1.85
248 249 7.117523 GGCAATTGTGATACATTGCAAAACTTA 59.882 33.333 16.43 0.00 40.74 2.24
249 250 6.073112 GGCAATTGTGATACATTGCAAAACTT 60.073 34.615 16.43 0.00 40.74 2.66
250 251 5.409214 GGCAATTGTGATACATTGCAAAACT 59.591 36.000 16.43 0.00 40.74 2.66
251 252 5.178996 TGGCAATTGTGATACATTGCAAAAC 59.821 36.000 16.43 0.00 40.74 2.43
252 253 5.178996 GTGGCAATTGTGATACATTGCAAAA 59.821 36.000 16.43 0.00 40.74 2.44
253 254 4.689812 GTGGCAATTGTGATACATTGCAAA 59.310 37.500 16.43 3.96 40.74 3.68
254 255 4.021280 AGTGGCAATTGTGATACATTGCAA 60.021 37.500 16.43 0.00 40.74 4.08
255 256 3.510753 AGTGGCAATTGTGATACATTGCA 59.489 39.130 16.43 0.00 40.74 4.08
256 257 4.114058 AGTGGCAATTGTGATACATTGC 57.886 40.909 7.40 8.11 39.54 3.56
257 258 6.157904 TCAAAGTGGCAATTGTGATACATTG 58.842 36.000 7.40 10.13 0.00 2.82
258 259 6.343716 TCAAAGTGGCAATTGTGATACATT 57.656 33.333 7.40 0.00 0.00 2.71
259 260 5.981088 TCAAAGTGGCAATTGTGATACAT 57.019 34.783 7.40 0.00 0.00 2.29
260 261 5.781210 TTCAAAGTGGCAATTGTGATACA 57.219 34.783 7.40 0.00 0.00 2.29
261 262 7.656707 AATTTCAAAGTGGCAATTGTGATAC 57.343 32.000 7.40 1.82 0.00 2.24
262 263 8.674263 AAAATTTCAAAGTGGCAATTGTGATA 57.326 26.923 7.40 3.65 0.00 2.15
263 264 7.571080 AAAATTTCAAAGTGGCAATTGTGAT 57.429 28.000 7.40 1.07 0.00 3.06
264 265 6.998968 AAAATTTCAAAGTGGCAATTGTGA 57.001 29.167 7.40 4.82 0.00 3.58
294 295 9.537192 ACAATATATCAATTTTGCCATTCAGTG 57.463 29.630 0.00 0.00 29.87 3.66
295 296 9.754382 GACAATATATCAATTTTGCCATTCAGT 57.246 29.630 0.00 0.00 29.87 3.41
296 297 9.752961 TGACAATATATCAATTTTGCCATTCAG 57.247 29.630 0.00 0.00 29.87 3.02
301 302 8.881743 GCTTTTGACAATATATCAATTTTGCCA 58.118 29.630 3.78 0.00 36.02 4.92
302 303 9.101655 AGCTTTTGACAATATATCAATTTTGCC 57.898 29.630 3.78 0.00 36.02 4.52
318 319 7.701924 CACTTTTGTCATTCTTAGCTTTTGACA 59.298 33.333 0.00 2.10 43.46 3.58
319 320 7.915397 TCACTTTTGTCATTCTTAGCTTTTGAC 59.085 33.333 0.00 0.00 37.73 3.18
320 321 7.995289 TCACTTTTGTCATTCTTAGCTTTTGA 58.005 30.769 0.00 0.00 0.00 2.69
321 322 8.633075 TTCACTTTTGTCATTCTTAGCTTTTG 57.367 30.769 0.00 0.00 0.00 2.44
322 323 9.822185 ATTTCACTTTTGTCATTCTTAGCTTTT 57.178 25.926 0.00 0.00 0.00 2.27
323 324 9.252962 CATTTCACTTTTGTCATTCTTAGCTTT 57.747 29.630 0.00 0.00 0.00 3.51
324 325 8.416329 ACATTTCACTTTTGTCATTCTTAGCTT 58.584 29.630 0.00 0.00 0.00 3.74
325 326 7.945134 ACATTTCACTTTTGTCATTCTTAGCT 58.055 30.769 0.00 0.00 0.00 3.32
326 327 8.579682 AACATTTCACTTTTGTCATTCTTAGC 57.420 30.769 0.00 0.00 0.00 3.09
340 341 8.515414 GCCACTCTAGAATTTAACATTTCACTT 58.485 33.333 0.00 0.00 0.00 3.16
341 342 7.665559 TGCCACTCTAGAATTTAACATTTCACT 59.334 33.333 0.00 0.00 0.00 3.41
342 343 7.816640 TGCCACTCTAGAATTTAACATTTCAC 58.183 34.615 0.00 0.00 0.00 3.18
343 344 7.994425 TGCCACTCTAGAATTTAACATTTCA 57.006 32.000 0.00 0.00 0.00 2.69
346 347 8.624776 GCTTATGCCACTCTAGAATTTAACATT 58.375 33.333 0.00 0.00 0.00 2.71
347 348 7.775093 TGCTTATGCCACTCTAGAATTTAACAT 59.225 33.333 0.00 0.00 38.71 2.71
348 349 7.109501 TGCTTATGCCACTCTAGAATTTAACA 58.890 34.615 0.00 0.00 38.71 2.41
349 350 7.553881 TGCTTATGCCACTCTAGAATTTAAC 57.446 36.000 0.00 0.00 38.71 2.01
350 351 8.574251 TTTGCTTATGCCACTCTAGAATTTAA 57.426 30.769 0.00 0.00 38.71 1.52
351 352 7.829211 ACTTTGCTTATGCCACTCTAGAATTTA 59.171 33.333 0.00 0.00 38.71 1.40
352 353 6.660949 ACTTTGCTTATGCCACTCTAGAATTT 59.339 34.615 0.00 0.00 38.71 1.82
353 354 6.094603 CACTTTGCTTATGCCACTCTAGAATT 59.905 38.462 0.00 0.00 38.71 2.17
354 355 5.587844 CACTTTGCTTATGCCACTCTAGAAT 59.412 40.000 0.00 0.00 38.71 2.40
355 356 4.937620 CACTTTGCTTATGCCACTCTAGAA 59.062 41.667 0.00 0.00 38.71 2.10
356 357 4.507710 CACTTTGCTTATGCCACTCTAGA 58.492 43.478 0.00 0.00 38.71 2.43
357 358 3.624861 CCACTTTGCTTATGCCACTCTAG 59.375 47.826 0.00 0.00 38.71 2.43
358 359 3.609853 CCACTTTGCTTATGCCACTCTA 58.390 45.455 0.00 0.00 38.71 2.43
359 360 2.440409 CCACTTTGCTTATGCCACTCT 58.560 47.619 0.00 0.00 38.71 3.24
360 361 1.474077 CCCACTTTGCTTATGCCACTC 59.526 52.381 0.00 0.00 38.71 3.51
361 362 1.549203 CCCACTTTGCTTATGCCACT 58.451 50.000 0.00 0.00 38.71 4.00
362 363 0.108662 GCCCACTTTGCTTATGCCAC 60.109 55.000 0.00 0.00 38.71 5.01
363 364 0.541530 TGCCCACTTTGCTTATGCCA 60.542 50.000 0.00 0.00 38.71 4.92
364 365 0.607620 TTGCCCACTTTGCTTATGCC 59.392 50.000 0.00 0.00 38.71 4.40
365 366 2.453983 TTTGCCCACTTTGCTTATGC 57.546 45.000 0.00 0.00 40.20 3.14
366 367 4.379652 AGTTTTTGCCCACTTTGCTTATG 58.620 39.130 0.00 0.00 0.00 1.90
367 368 4.687901 AGTTTTTGCCCACTTTGCTTAT 57.312 36.364 0.00 0.00 0.00 1.73
368 369 4.890581 TCTAGTTTTTGCCCACTTTGCTTA 59.109 37.500 0.00 0.00 0.00 3.09
369 370 3.704061 TCTAGTTTTTGCCCACTTTGCTT 59.296 39.130 0.00 0.00 0.00 3.91
370 371 3.295973 TCTAGTTTTTGCCCACTTTGCT 58.704 40.909 0.00 0.00 0.00 3.91
371 372 3.068165 ACTCTAGTTTTTGCCCACTTTGC 59.932 43.478 0.00 0.00 0.00 3.68
372 373 4.338118 TCACTCTAGTTTTTGCCCACTTTG 59.662 41.667 0.00 0.00 0.00 2.77
373 374 4.338400 GTCACTCTAGTTTTTGCCCACTTT 59.662 41.667 0.00 0.00 0.00 2.66
374 375 3.883489 GTCACTCTAGTTTTTGCCCACTT 59.117 43.478 0.00 0.00 0.00 3.16
375 376 3.118038 TGTCACTCTAGTTTTTGCCCACT 60.118 43.478 0.00 0.00 0.00 4.00
376 377 3.211045 TGTCACTCTAGTTTTTGCCCAC 58.789 45.455 0.00 0.00 0.00 4.61
377 378 3.569194 TGTCACTCTAGTTTTTGCCCA 57.431 42.857 0.00 0.00 0.00 5.36
378 379 4.911514 TTTGTCACTCTAGTTTTTGCCC 57.088 40.909 0.00 0.00 0.00 5.36
379 380 6.096695 TGTTTTTGTCACTCTAGTTTTTGCC 58.903 36.000 0.00 0.00 0.00 4.52
380 381 7.755582 ATGTTTTTGTCACTCTAGTTTTTGC 57.244 32.000 0.00 0.00 0.00 3.68
412 413 3.829601 ACACCGGCCATCATAAAGAAAAA 59.170 39.130 0.00 0.00 0.00 1.94
413 414 3.192422 CACACCGGCCATCATAAAGAAAA 59.808 43.478 0.00 0.00 0.00 2.29
414 415 2.752354 CACACCGGCCATCATAAAGAAA 59.248 45.455 0.00 0.00 0.00 2.52
415 416 2.290641 ACACACCGGCCATCATAAAGAA 60.291 45.455 0.00 0.00 0.00 2.52
416 417 1.280710 ACACACCGGCCATCATAAAGA 59.719 47.619 0.00 0.00 0.00 2.52
417 418 1.750193 ACACACCGGCCATCATAAAG 58.250 50.000 0.00 0.00 0.00 1.85
418 419 2.634600 GTACACACCGGCCATCATAAA 58.365 47.619 0.00 0.00 0.00 1.40
419 420 1.471851 CGTACACACCGGCCATCATAA 60.472 52.381 0.00 0.00 0.00 1.90
420 421 0.103390 CGTACACACCGGCCATCATA 59.897 55.000 0.00 0.00 0.00 2.15
421 422 1.153449 CGTACACACCGGCCATCAT 60.153 57.895 0.00 0.00 0.00 2.45
422 423 2.263227 CGTACACACCGGCCATCA 59.737 61.111 0.00 0.00 0.00 3.07
423 424 2.098233 CACGTACACACCGGCCATC 61.098 63.158 0.00 0.00 0.00 3.51
424 425 1.895020 ATCACGTACACACCGGCCAT 61.895 55.000 0.00 0.00 0.00 4.40
425 426 2.102109 AATCACGTACACACCGGCCA 62.102 55.000 0.00 0.00 0.00 5.36
426 427 0.952010 AAATCACGTACACACCGGCC 60.952 55.000 0.00 0.00 0.00 6.13
427 428 0.165079 CAAATCACGTACACACCGGC 59.835 55.000 0.00 0.00 0.00 6.13
428 429 1.504359 ACAAATCACGTACACACCGG 58.496 50.000 0.00 0.00 0.00 5.28
429 430 3.311106 AGTACAAATCACGTACACACCG 58.689 45.455 0.00 0.00 41.40 4.94
430 431 8.464770 TTTATAGTACAAATCACGTACACACC 57.535 34.615 0.00 0.00 41.40 4.16
465 466 9.962783 GTAATACGATGTCTTATTTACTGGAGT 57.037 33.333 0.00 0.00 0.00 3.85
466 467 9.114965 CGTAATACGATGTCTTATTTACTGGAG 57.885 37.037 7.05 0.00 46.05 3.86
467 468 8.839343 TCGTAATACGATGTCTTATTTACTGGA 58.161 33.333 11.84 0.00 46.73 3.86
484 485 9.494679 CGTACAACAATATTTCATCGTAATACG 57.505 33.333 6.45 6.45 44.19 3.06
490 491 9.485591 GAAATTCGTACAACAATATTTCATCGT 57.514 29.630 0.00 0.00 34.06 3.73
491 492 9.702726 AGAAATTCGTACAACAATATTTCATCG 57.297 29.630 0.00 0.00 35.51 3.84
544 545 3.066380 GGCCGAGCAAACATTCATTTTT 58.934 40.909 0.00 0.00 0.00 1.94
545 546 2.299867 AGGCCGAGCAAACATTCATTTT 59.700 40.909 0.00 0.00 0.00 1.82
546 547 1.895131 AGGCCGAGCAAACATTCATTT 59.105 42.857 0.00 0.00 0.00 2.32
547 548 1.203052 CAGGCCGAGCAAACATTCATT 59.797 47.619 0.00 0.00 0.00 2.57
548 549 0.813184 CAGGCCGAGCAAACATTCAT 59.187 50.000 0.00 0.00 0.00 2.57
549 550 1.865788 GCAGGCCGAGCAAACATTCA 61.866 55.000 16.97 0.00 0.00 2.57
551 552 2.639327 GGCAGGCCGAGCAAACATT 61.639 57.895 22.07 0.00 0.00 2.71
553 554 4.269523 AGGCAGGCCGAGCAAACA 62.270 61.111 22.07 0.00 41.95 2.83
554 555 3.741476 CAGGCAGGCCGAGCAAAC 61.741 66.667 22.07 7.53 41.95 2.93
558 559 3.406595 AATACCAGGCAGGCCGAGC 62.407 63.158 14.04 14.04 43.14 5.03
560 561 1.992834 TGAATACCAGGCAGGCCGA 60.993 57.895 4.37 0.00 43.14 5.54
561 562 1.819632 GTGAATACCAGGCAGGCCG 60.820 63.158 4.37 0.00 43.14 6.13
562 563 0.749454 CTGTGAATACCAGGCAGGCC 60.749 60.000 0.97 0.97 43.14 5.19
563 564 0.035056 ACTGTGAATACCAGGCAGGC 60.035 55.000 0.00 0.00 43.14 4.85
564 565 1.679944 CCACTGTGAATACCAGGCAGG 60.680 57.143 9.86 0.00 45.67 4.85
565 566 1.679944 CCCACTGTGAATACCAGGCAG 60.680 57.143 9.86 0.00 34.16 4.85
566 567 0.327924 CCCACTGTGAATACCAGGCA 59.672 55.000 9.86 0.00 34.16 4.75
567 568 0.394352 CCCCACTGTGAATACCAGGC 60.394 60.000 9.86 0.00 34.16 4.85
568 569 0.255890 CCCCCACTGTGAATACCAGG 59.744 60.000 9.86 0.00 34.16 4.45
569 570 1.285280 TCCCCCACTGTGAATACCAG 58.715 55.000 9.86 0.00 36.01 4.00
570 571 1.633432 CTTCCCCCACTGTGAATACCA 59.367 52.381 9.86 0.00 0.00 3.25
571 572 1.913419 TCTTCCCCCACTGTGAATACC 59.087 52.381 9.86 0.00 0.00 2.73
572 573 3.545703 CATCTTCCCCCACTGTGAATAC 58.454 50.000 9.86 0.00 0.00 1.89
573 574 2.092429 GCATCTTCCCCCACTGTGAATA 60.092 50.000 9.86 0.00 0.00 1.75
577 578 1.746615 CGCATCTTCCCCCACTGTG 60.747 63.158 0.00 0.00 0.00 3.66
578 579 1.918293 TCGCATCTTCCCCCACTGT 60.918 57.895 0.00 0.00 0.00 3.55
579 580 1.450312 GTCGCATCTTCCCCCACTG 60.450 63.158 0.00 0.00 0.00 3.66
580 581 2.990479 GTCGCATCTTCCCCCACT 59.010 61.111 0.00 0.00 0.00 4.00
582 583 4.467084 GCGTCGCATCTTCCCCCA 62.467 66.667 13.44 0.00 0.00 4.96
583 584 2.701163 CTAGCGTCGCATCTTCCCCC 62.701 65.000 21.09 0.00 0.00 5.40
585 586 0.595310 GACTAGCGTCGCATCTTCCC 60.595 60.000 21.09 0.00 0.00 3.97
586 587 0.595310 GGACTAGCGTCGCATCTTCC 60.595 60.000 21.09 14.75 41.16 3.46
587 588 0.382515 AGGACTAGCGTCGCATCTTC 59.617 55.000 21.09 9.57 41.16 2.87
588 589 1.334243 GTAGGACTAGCGTCGCATCTT 59.666 52.381 21.09 12.32 41.16 2.40
590 591 0.040246 GGTAGGACTAGCGTCGCATC 60.040 60.000 21.09 13.29 41.16 3.91
591 592 1.453762 GGGTAGGACTAGCGTCGCAT 61.454 60.000 21.09 3.94 41.16 4.73
592 593 2.117156 GGGTAGGACTAGCGTCGCA 61.117 63.158 21.09 4.57 41.16 5.10
594 595 0.463295 TGAGGGTAGGACTAGCGTCG 60.463 60.000 19.78 0.00 45.75 5.12
595 596 1.404748 GTTGAGGGTAGGACTAGCGTC 59.595 57.143 18.87 18.87 44.15 5.19
596 597 1.472188 GTTGAGGGTAGGACTAGCGT 58.528 55.000 3.70 3.70 34.59 5.07
598 599 1.121378 GGGTTGAGGGTAGGACTAGC 58.879 60.000 0.05 0.05 0.00 3.42
600 601 2.045326 ACATGGGTTGAGGGTAGGACTA 59.955 50.000 0.00 0.00 0.00 2.59
601 602 1.203440 ACATGGGTTGAGGGTAGGACT 60.203 52.381 0.00 0.00 0.00 3.85
605 606 1.134788 GTCGACATGGGTTGAGGGTAG 60.135 57.143 11.55 0.00 38.11 3.18
607 608 1.677552 GTCGACATGGGTTGAGGGT 59.322 57.895 11.55 0.00 38.11 4.34
608 609 1.078426 GGTCGACATGGGTTGAGGG 60.078 63.158 18.91 0.00 38.11 4.30
609 610 1.447838 CGGTCGACATGGGTTGAGG 60.448 63.158 18.91 0.00 38.11 3.86
610 611 0.736325 GTCGGTCGACATGGGTTGAG 60.736 60.000 18.91 0.00 44.02 3.02
613 614 2.660802 GGTCGGTCGACATGGGTT 59.339 61.111 22.35 0.00 46.20 4.11
618 619 0.028505 CGTTATCGGTCGGTCGACAT 59.971 55.000 22.35 12.23 46.20 3.06
642 643 4.749310 CCAGACGCGCTTCTGCCT 62.749 66.667 32.10 2.93 41.61 4.75
689 691 2.155155 CGTTTTCTGCTACGAGTTGTCC 59.845 50.000 0.00 0.00 40.03 4.02
894 1218 3.398490 CCCTTCTCCCCCTCTTATTCTT 58.602 50.000 0.00 0.00 0.00 2.52
904 1228 3.744155 CTTGCCCCCTTCTCCCCC 61.744 72.222 0.00 0.00 0.00 5.40
949 2493 2.812619 CCTTCCGGGGGAGAGATGC 61.813 68.421 0.00 0.00 31.21 3.91
1218 2762 1.524002 CACCGCCCTGATCAGATGT 59.476 57.895 24.62 11.70 0.00 3.06
1345 2889 3.000041 TGCAACGCTTAATCACCTGTAG 59.000 45.455 0.00 0.00 0.00 2.74
1422 2966 0.894835 CAACCCCAAAAATCTCCCGG 59.105 55.000 0.00 0.00 0.00 5.73
1440 2984 3.074390 CCAATAGGTGGCCATAGAATCCA 59.926 47.826 9.72 0.00 41.72 3.41
1494 3038 0.807496 AGCCGAGCAAGAGAAAATGC 59.193 50.000 0.00 0.00 42.87 3.56
1608 3152 0.835276 CATCCATGGCACTCTGAGGA 59.165 55.000 6.96 0.00 0.00 3.71
1680 3224 1.842562 ACATGGGAGCTTACTGCAGAT 59.157 47.619 23.35 7.41 45.94 2.90
1683 3227 0.983467 TGACATGGGAGCTTACTGCA 59.017 50.000 0.00 0.00 45.94 4.41
1734 3278 1.207390 CTAGCGACTTCATGAGCTGC 58.793 55.000 15.41 9.60 40.51 5.25
1879 3423 4.998671 TCTCATAAAGGTCAGAGAGCAG 57.001 45.455 0.00 0.00 32.57 4.24
1909 3453 3.848726 CCTTCCCAATTGACGGAATTTG 58.151 45.455 14.32 5.75 37.52 2.32
2309 3853 4.462508 TCACTCTCATTTTCGCTCTCAT 57.537 40.909 0.00 0.00 0.00 2.90
2348 3892 3.181516 GCTCTTTTTATCAGTGCTGTCCG 60.182 47.826 0.00 0.00 0.00 4.79
2499 4043 6.204359 CAGCTGCATTAAGCCATACTTTAAG 58.796 40.000 0.00 0.00 44.68 1.85
2764 4308 3.799917 GCACATGCAACCAAGCTAAAACT 60.800 43.478 0.00 0.00 41.59 2.66
3197 4741 8.090831 ACATCGAATTATGTGTATGCTCTGTAT 58.909 33.333 0.00 0.00 38.65 2.29
3261 4805 3.126001 TCTTGTACCAAGCTGTCCAAG 57.874 47.619 3.84 3.84 0.00 3.61
3262 4806 3.327757 AGATCTTGTACCAAGCTGTCCAA 59.672 43.478 0.00 0.00 0.00 3.53
3263 4807 2.906389 AGATCTTGTACCAAGCTGTCCA 59.094 45.455 0.00 0.00 0.00 4.02
3264 4808 3.055819 TCAGATCTTGTACCAAGCTGTCC 60.056 47.826 0.00 0.00 0.00 4.02
3265 4809 4.180057 CTCAGATCTTGTACCAAGCTGTC 58.820 47.826 0.00 4.63 0.00 3.51
3266 4810 3.580458 ACTCAGATCTTGTACCAAGCTGT 59.420 43.478 0.00 0.00 0.00 4.40
3267 4811 3.931468 CACTCAGATCTTGTACCAAGCTG 59.069 47.826 0.00 2.98 0.00 4.24
3268 4812 3.834813 TCACTCAGATCTTGTACCAAGCT 59.165 43.478 0.00 0.00 0.00 3.74
3398 4942 4.109877 AGGCAAATATGATCCCAGAAGG 57.890 45.455 0.00 0.00 0.00 3.46
3421 4965 7.329717 GGTTAATCTCGAAATGTGAGCCTATAG 59.670 40.741 0.00 0.00 33.41 1.31
3430 4974 3.689161 TGCCTGGTTAATCTCGAAATGTG 59.311 43.478 0.00 0.00 0.00 3.21
3457 5001 4.558226 ACACACAGAAGATCTATGCCAA 57.442 40.909 0.00 0.00 0.00 4.52
3474 5022 4.365514 TCCTTGGCTCAAGATTAACACA 57.634 40.909 14.33 0.00 43.42 3.72
3475 5023 5.705609 TTTCCTTGGCTCAAGATTAACAC 57.294 39.130 14.33 0.00 43.42 3.32
3578 5133 5.928264 CAGGGATGGTTTTCTTTTTCACATC 59.072 40.000 0.00 0.00 34.16 3.06
3600 5155 5.582550 TGTATAGCAACGAAGAGATCACAG 58.417 41.667 0.00 0.00 0.00 3.66
3733 5288 2.035321 TCAAAGCCCCGACAACAAAATC 59.965 45.455 0.00 0.00 0.00 2.17
3793 5348 0.676782 GCATCGGCACTAACCTTGGT 60.677 55.000 0.00 0.00 40.72 3.67
3826 5381 2.234661 TCACCCTGAACTCTAGTGCATG 59.765 50.000 0.00 0.00 32.14 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.