Multiple sequence alignment - TraesCS2A01G348000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G348000 chr2A 100.000 9029 0 0 1 9029 586887229 586896257 0.000000e+00 16674.0
1 TraesCS2A01G348000 chr2A 73.846 520 120 15 183 695 778844021 778843511 9.250000e-45 193.0
2 TraesCS2A01G348000 chr2B 94.716 2271 98 14 5991 8251 522198287 522200545 0.000000e+00 3509.0
3 TraesCS2A01G348000 chr2B 89.025 2205 98 48 2039 4155 522193372 522195520 0.000000e+00 2599.0
4 TraesCS2A01G348000 chr2B 93.771 1204 48 12 843 2038 522192155 522193339 0.000000e+00 1783.0
5 TraesCS2A01G348000 chr2B 92.579 1078 51 14 4160 5218 522196375 522197442 0.000000e+00 1520.0
6 TraesCS2A01G348000 chr2B 87.452 789 47 26 5258 5996 522197452 522198238 0.000000e+00 861.0
7 TraesCS2A01G348000 chr2B 87.102 597 41 24 8453 9029 522200577 522201157 2.120000e-180 643.0
8 TraesCS2A01G348000 chr2B 87.611 113 8 5 715 826 522191992 522192099 9.520000e-25 126.0
9 TraesCS2A01G348000 chr2D 94.202 2225 96 14 6048 8250 443240158 443242371 0.000000e+00 3363.0
10 TraesCS2A01G348000 chr2D 89.684 2501 92 52 2039 4449 443236120 443238544 0.000000e+00 3037.0
11 TraesCS2A01G348000 chr2D 90.858 1433 64 28 4484 5893 443238541 443239929 0.000000e+00 1858.0
12 TraesCS2A01G348000 chr2D 94.978 677 20 9 843 1508 443234933 443235606 0.000000e+00 1050.0
13 TraesCS2A01G348000 chr2D 90.539 687 52 3 1 686 633191333 633192007 0.000000e+00 896.0
14 TraesCS2A01G348000 chr2D 94.141 495 22 2 1548 2038 443235601 443236092 0.000000e+00 747.0
15 TraesCS2A01G348000 chr2D 88.186 601 33 21 8453 9029 443242412 443242998 0.000000e+00 682.0
16 TraesCS2A01G348000 chr2D 90.049 412 36 5 298 704 544663605 544664016 6.210000e-146 529.0
17 TraesCS2A01G348000 chr2D 91.241 137 9 3 1334 1469 90219003 90218869 5.570000e-42 183.0
18 TraesCS2A01G348000 chr2D 91.200 125 5 4 695 818 443234549 443234668 2.020000e-36 165.0
19 TraesCS2A01G348000 chr1B 90.544 698 62 4 1 696 581101591 581100896 0.000000e+00 920.0
20 TraesCS2A01G348000 chr1B 86.100 259 21 9 3296 3553 500626787 500627031 1.930000e-66 265.0
21 TraesCS2A01G348000 chr6B 89.571 700 61 9 1 698 526925022 526925711 0.000000e+00 878.0
22 TraesCS2A01G348000 chr6B 89.520 687 63 6 1 685 526892524 526893203 0.000000e+00 861.0
23 TraesCS2A01G348000 chr6B 83.186 113 15 4 5783 5893 164383641 164383751 5.770000e-17 100.0
24 TraesCS2A01G348000 chr6B 96.364 55 2 0 5898 5952 164383779 164383833 3.470000e-14 91.6
25 TraesCS2A01G348000 chr6B 96.364 55 2 0 5898 5952 164384531 164384585 3.470000e-14 91.6
26 TraesCS2A01G348000 chrUn 82.362 669 114 4 20 686 227958332 227957666 6.080000e-161 579.0
27 TraesCS2A01G348000 chrUn 93.333 45 3 0 5849 5893 305661923 305661967 5.850000e-07 67.6
28 TraesCS2A01G348000 chrUn 93.333 45 3 0 5849 5893 352665757 352665801 5.850000e-07 67.6
29 TraesCS2A01G348000 chrUn 93.333 45 3 0 5849 5893 463428273 463428229 5.850000e-07 67.6
30 TraesCS2A01G348000 chr5D 88.713 443 45 5 2 441 43905822 43905382 3.710000e-148 536.0
31 TraesCS2A01G348000 chr1A 74.004 527 116 19 186 702 560254564 560254049 2.570000e-45 195.0
32 TraesCS2A01G348000 chr4D 83.333 162 24 3 536 696 116823709 116823550 7.310000e-31 147.0
33 TraesCS2A01G348000 chr5B 88.333 120 8 5 1353 1469 563546820 563546704 1.220000e-28 139.0
34 TraesCS2A01G348000 chr6D 82.456 114 14 6 5783 5893 86735154 86735264 2.680000e-15 95.3
35 TraesCS2A01G348000 chr6D 96.364 55 2 0 5898 5952 86735292 86735346 3.470000e-14 91.6
36 TraesCS2A01G348000 chr6A 96.364 55 2 0 5898 5952 104516290 104516344 3.470000e-14 91.6
37 TraesCS2A01G348000 chr6A 81.416 113 17 4 5783 5893 104515616 104515726 1.250000e-13 89.8
38 TraesCS2A01G348000 chr6A 95.833 48 2 0 5905 5952 104515766 104515813 2.700000e-10 78.7
39 TraesCS2A01G348000 chr4A 93.478 46 3 0 5848 5893 443647882 443647837 1.630000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G348000 chr2A 586887229 586896257 9028 False 16674.000000 16674 100.000000 1 9029 1 chr2A.!!$F1 9028
1 TraesCS2A01G348000 chr2B 522191992 522201157 9165 False 1577.285714 3509 90.322286 715 9029 7 chr2B.!!$F1 8314
2 TraesCS2A01G348000 chr2D 443234549 443242998 8449 False 1557.428571 3363 91.892714 695 9029 7 chr2D.!!$F3 8334
3 TraesCS2A01G348000 chr2D 633191333 633192007 674 False 896.000000 896 90.539000 1 686 1 chr2D.!!$F2 685
4 TraesCS2A01G348000 chr1B 581100896 581101591 695 True 920.000000 920 90.544000 1 696 1 chr1B.!!$R1 695
5 TraesCS2A01G348000 chr6B 526925022 526925711 689 False 878.000000 878 89.571000 1 698 1 chr6B.!!$F2 697
6 TraesCS2A01G348000 chr6B 526892524 526893203 679 False 861.000000 861 89.520000 1 685 1 chr6B.!!$F1 684
7 TraesCS2A01G348000 chrUn 227957666 227958332 666 True 579.000000 579 82.362000 20 686 1 chrUn.!!$R1 666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
45 46 0.319728 CACATATGGGAGGCTCGGAG 59.680 60.0 8.69 0.00 0.00 4.63 F
514 520 0.392336 TCAAGGTGTTGGCAAATGGC 59.608 50.0 0.00 0.00 43.74 4.40 F
687 693 0.899720 ATAAAGGCCGACGTTCTCCA 59.100 50.0 0.00 0.00 0.00 3.86 F
1545 1843 0.038618 GGGCGGTTTGGACAACAATC 60.039 55.0 0.00 0.00 39.21 2.67 F
1552 1850 0.109827 TTGGACAACAATCGCGCATG 60.110 50.0 8.75 5.17 33.18 4.06 F
2405 2749 0.962855 GAAGCTTCCTGGACAAGCCC 60.963 60.0 15.97 5.88 46.41 5.19 F
3138 3530 0.171455 CTCTACGAGTGTGCCTCCAC 59.829 60.0 0.00 0.00 42.40 4.02 F
3404 3835 0.667993 CAATAAATGCCATCGCCGGT 59.332 50.0 1.90 0.00 0.00 5.28 F
4739 6065 0.454957 GCTACATGCAGCAACGTTGG 60.455 55.0 28.33 14.58 41.40 3.77 F
5575 6912 0.811616 GCTCGTCAAGGTATGCCCAG 60.812 60.0 0.00 0.00 34.66 4.45 F
5724 7082 0.038526 CGAAGTGTTGTCGTAGGGCT 60.039 55.0 0.00 0.00 33.80 5.19 F
6282 7768 0.040514 TTTTGACACCATTCTGCGCG 60.041 50.0 0.00 0.00 0.00 6.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1526 1824 0.038618 GATTGTTGTCCAAACCGCCC 60.039 55.0 0.00 0.0 36.44 6.13 R
1533 1831 0.109827 CATGCGCGATTGTTGTCCAA 60.110 50.0 12.10 0.0 37.49 3.53 R
1564 1862 0.179174 GGCTAAACGCATCAAACCGG 60.179 55.0 0.00 0.0 41.67 5.28 R
2693 3062 0.392998 CCTGTCCCCCAAATCGTCTG 60.393 60.0 0.00 0.0 0.00 3.51 R
2748 3117 0.725784 CGGCAGCAGTAAACAAAGCG 60.726 55.0 0.00 0.0 0.00 4.68 R
4076 4520 1.085091 CGTATCGATACCTCCTCCGG 58.915 60.0 25.89 8.8 0.00 5.14 R
4650 5973 0.455633 CGCATTTGCTCTGGTCAAGC 60.456 55.0 0.51 0.0 40.26 4.01 R
4805 6133 0.813184 AAATTCTGCAGGTGATGGCG 59.187 50.0 15.13 0.0 0.00 5.69 R
5703 7061 0.038526 CCCTACGACAACACTTCGCT 60.039 55.0 0.00 0.0 40.24 4.93 R
7281 8768 0.731514 CGGCATGTTGACGTCGTAGT 60.732 55.0 11.62 0.0 45.41 2.73 R
7521 9008 2.430080 CTTGGTGTGCTTGACGACGC 62.430 60.0 0.00 0.0 0.00 5.19 R
8251 9758 0.246635 CGTGTCGATTTCCTCCAGGT 59.753 55.0 0.00 0.0 36.34 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 0.630673 TTTGGCACATATGGGAGGCT 59.369 50.000 9.80 0.00 39.30 4.58
45 46 0.319728 CACATATGGGAGGCTCGGAG 59.680 60.000 8.69 0.00 0.00 4.63
62 64 2.681976 CGGAGTGCTGGAAGGAATGAAT 60.682 50.000 0.00 0.00 34.45 2.57
112 114 2.236766 GCTAGGACCCGAGCTTACATA 58.763 52.381 12.93 0.00 40.66 2.29
118 120 3.887716 GGACCCGAGCTTACATAGAGTTA 59.112 47.826 0.00 0.00 0.00 2.24
132 134 7.016153 ACATAGAGTTAATCTTCCAACACCA 57.984 36.000 0.00 0.00 39.64 4.17
141 143 4.223556 TCTTCCAACACCAGTACAAACA 57.776 40.909 0.00 0.00 0.00 2.83
219 224 1.228552 AGGGCACGATGGTTGCTTT 60.229 52.632 0.00 0.00 0.00 3.51
224 229 1.470098 GCACGATGGTTGCTTTCTCAT 59.530 47.619 0.00 0.00 0.00 2.90
272 278 1.371467 ATCTGGGATTGGTGTGGTGA 58.629 50.000 0.00 0.00 0.00 4.02
364 370 4.899239 GAGGCCATGACGCTCCGG 62.899 72.222 5.01 0.00 0.00 5.14
384 390 1.741770 GAGCTGTCCGTTTGGCGAT 60.742 57.895 0.00 0.00 44.77 4.58
385 391 1.970917 GAGCTGTCCGTTTGGCGATG 61.971 60.000 0.00 0.00 44.77 3.84
386 392 2.032634 GCTGTCCGTTTGGCGATGA 61.033 57.895 0.00 0.00 44.77 2.92
393 399 1.438651 CGTTTGGCGATGAAGGAAGA 58.561 50.000 0.00 0.00 44.77 2.87
400 406 2.480244 GGCGATGAAGGAAGAATTTGCC 60.480 50.000 0.00 0.00 0.00 4.52
458 464 1.099879 GCGCATGAAATCTCCAGCCT 61.100 55.000 0.30 0.00 0.00 4.58
484 490 1.743772 CGTTCCATGGTGGGATCTGTC 60.744 57.143 12.58 0.00 38.32 3.51
503 509 2.230664 TTGGCTGAGGTCAAGGTGT 58.769 52.632 0.00 0.00 31.54 4.16
514 520 0.392336 TCAAGGTGTTGGCAAATGGC 59.608 50.000 0.00 0.00 43.74 4.40
547 553 1.793613 GTTCTTGCATGTGCGTCGC 60.794 57.895 11.10 11.10 45.83 5.19
554 560 1.349627 CATGTGCGTCGCCATCTTC 59.650 57.895 15.88 0.00 0.00 2.87
606 612 9.998106 ATCAAGCTTGTTTTCTACTAGTCTTTA 57.002 29.630 25.19 0.33 32.94 1.85
648 654 5.380043 GGATTGCATCCTGGAGATTCTTTA 58.620 41.667 1.52 0.00 46.19 1.85
686 692 1.664151 CAATAAAGGCCGACGTTCTCC 59.336 52.381 0.00 0.00 0.00 3.71
687 693 0.899720 ATAAAGGCCGACGTTCTCCA 59.100 50.000 0.00 0.00 0.00 3.86
689 695 0.899720 AAAGGCCGACGTTCTCCATA 59.100 50.000 0.00 0.00 0.00 2.74
720 726 5.293569 CACAAAATCTTACATACGAGACCCC 59.706 44.000 0.00 0.00 0.00 4.95
723 729 2.381911 TCTTACATACGAGACCCCACC 58.618 52.381 0.00 0.00 0.00 4.61
726 732 0.976073 ACATACGAGACCCCACCTGG 60.976 60.000 0.00 0.00 0.00 4.45
782 788 2.418609 CCTCTTGTCTGTCACACACACA 60.419 50.000 0.00 0.00 33.41 3.72
788 794 2.099921 GTCTGTCACACACACACTCTCT 59.900 50.000 0.00 0.00 0.00 3.10
789 795 2.359214 TCTGTCACACACACACTCTCTC 59.641 50.000 0.00 0.00 0.00 3.20
793 799 1.345741 CACACACACACTCTCTCCCAT 59.654 52.381 0.00 0.00 0.00 4.00
794 800 1.620819 ACACACACACTCTCTCCCATC 59.379 52.381 0.00 0.00 0.00 3.51
795 801 1.620323 CACACACACTCTCTCCCATCA 59.380 52.381 0.00 0.00 0.00 3.07
796 802 1.898472 ACACACACTCTCTCCCATCAG 59.102 52.381 0.00 0.00 0.00 2.90
797 803 1.206610 CACACACTCTCTCCCATCAGG 59.793 57.143 0.00 0.00 0.00 3.86
895 1143 1.006832 AATCGCGCATCACACTTACC 58.993 50.000 8.75 0.00 0.00 2.85
906 1154 2.999063 ACTTACCCGTGGACCCCG 60.999 66.667 0.00 0.00 0.00 5.73
979 1228 2.761208 GCCCACTATATATGACGCCTCT 59.239 50.000 0.00 0.00 0.00 3.69
1061 1313 2.023673 AGAGATCGAAGCAGAGTGGAG 58.976 52.381 0.00 0.00 0.00 3.86
1095 1347 2.684843 CGCCAACAGGAGCAAGCTC 61.685 63.158 13.50 13.50 42.04 4.09
1509 1807 4.719616 GCTGCCGTTTCGCGTGTC 62.720 66.667 5.77 0.00 39.32 3.67
1510 1808 4.072088 CTGCCGTTTCGCGTGTCC 62.072 66.667 5.77 0.00 39.32 4.02
1511 1809 4.595538 TGCCGTTTCGCGTGTCCT 62.596 61.111 5.77 0.00 39.32 3.85
1512 1810 4.072088 GCCGTTTCGCGTGTCCTG 62.072 66.667 5.77 0.00 39.32 3.86
1513 1811 2.660552 CCGTTTCGCGTGTCCTGT 60.661 61.111 5.77 0.00 39.32 4.00
1514 1812 2.544359 CGTTTCGCGTGTCCTGTG 59.456 61.111 5.77 0.00 35.54 3.66
1515 1813 2.235016 CGTTTCGCGTGTCCTGTGT 61.235 57.895 5.77 0.00 35.54 3.72
1516 1814 1.563173 GTTTCGCGTGTCCTGTGTC 59.437 57.895 5.77 0.00 0.00 3.67
1517 1815 1.593209 TTTCGCGTGTCCTGTGTCC 60.593 57.895 5.77 0.00 0.00 4.02
1518 1816 2.981977 TTTCGCGTGTCCTGTGTCCC 62.982 60.000 5.77 0.00 0.00 4.46
1520 1818 4.295119 GCGTGTCCTGTGTCCCGT 62.295 66.667 0.00 0.00 0.00 5.28
1521 1819 2.049433 CGTGTCCTGTGTCCCGTC 60.049 66.667 0.00 0.00 0.00 4.79
1522 1820 2.561956 CGTGTCCTGTGTCCCGTCT 61.562 63.158 0.00 0.00 0.00 4.18
1523 1821 1.006102 GTGTCCTGTGTCCCGTCTG 60.006 63.158 0.00 0.00 0.00 3.51
1524 1822 2.048127 GTCCTGTGTCCCGTCTGC 60.048 66.667 0.00 0.00 0.00 4.26
1525 1823 2.203640 TCCTGTGTCCCGTCTGCT 60.204 61.111 0.00 0.00 0.00 4.24
1526 1824 2.047844 CCTGTGTCCCGTCTGCTG 60.048 66.667 0.00 0.00 0.00 4.41
1527 1825 2.047844 CTGTGTCCCGTCTGCTGG 60.048 66.667 0.00 0.00 0.00 4.85
1535 1833 3.726517 CGTCTGCTGGGCGGTTTG 61.727 66.667 0.00 0.00 36.18 2.93
1536 1834 3.365265 GTCTGCTGGGCGGTTTGG 61.365 66.667 0.00 0.00 36.18 3.28
1537 1835 3.565214 TCTGCTGGGCGGTTTGGA 61.565 61.111 0.00 0.00 36.18 3.53
1538 1836 3.365265 CTGCTGGGCGGTTTGGAC 61.365 66.667 0.00 0.00 0.00 4.02
1539 1837 4.196778 TGCTGGGCGGTTTGGACA 62.197 61.111 0.00 0.00 0.00 4.02
1540 1838 2.909965 GCTGGGCGGTTTGGACAA 60.910 61.111 0.00 0.00 0.00 3.18
1541 1839 3.039134 CTGGGCGGTTTGGACAAC 58.961 61.111 0.00 0.00 0.00 3.32
1542 1840 1.826054 CTGGGCGGTTTGGACAACA 60.826 57.895 0.00 0.00 0.00 3.33
1543 1841 1.379977 TGGGCGGTTTGGACAACAA 60.380 52.632 0.00 0.00 37.28 2.83
1544 1842 0.757188 TGGGCGGTTTGGACAACAAT 60.757 50.000 0.00 0.00 39.21 2.71
1545 1843 0.038618 GGGCGGTTTGGACAACAATC 60.039 55.000 0.00 0.00 39.21 2.67
1546 1844 0.386731 GGCGGTTTGGACAACAATCG 60.387 55.000 0.00 0.00 39.21 3.34
1547 1845 1.001745 GCGGTTTGGACAACAATCGC 61.002 55.000 10.65 10.65 46.45 4.58
1548 1846 0.724453 CGGTTTGGACAACAATCGCG 60.724 55.000 0.00 0.00 39.21 5.87
1549 1847 1.001745 GGTTTGGACAACAATCGCGC 61.002 55.000 0.00 0.00 39.21 6.86
1550 1848 0.317436 GTTTGGACAACAATCGCGCA 60.317 50.000 8.75 0.00 39.21 6.09
1551 1849 0.595588 TTTGGACAACAATCGCGCAT 59.404 45.000 8.75 0.00 39.21 4.73
1552 1850 0.109827 TTGGACAACAATCGCGCATG 60.110 50.000 8.75 5.17 33.18 4.06
1611 1909 1.795286 CGAGCTCCGATTTGGCTTATC 59.205 52.381 8.47 0.00 41.76 1.75
1617 1915 1.955778 CCGATTTGGCTTATCATGGCA 59.044 47.619 0.00 0.00 38.22 4.92
1625 1923 2.417243 GGCTTATCATGGCAAGCGTTTT 60.417 45.455 19.41 0.00 46.50 2.43
1657 1955 7.757097 ATTTGTAGTACTATCAAGCACGAAG 57.243 36.000 5.75 0.00 0.00 3.79
1675 1977 6.668323 CACGAAGACACATTTTTGTCCTTAT 58.332 36.000 0.00 0.00 46.14 1.73
1701 2003 6.893020 ATAGTCTAGGAAAGGAAACATGGT 57.107 37.500 0.00 0.00 0.00 3.55
1827 2129 3.565516 GAGCCGGTGAAGATTTTCAAAC 58.434 45.455 1.90 0.00 44.49 2.93
1909 2211 6.390721 ACAACACACTGTCTGTATCTCATAC 58.609 40.000 0.00 0.00 36.29 2.39
2086 2427 4.510167 AATCACATCCTACCCTCCAAAG 57.490 45.455 0.00 0.00 0.00 2.77
2176 2517 2.485479 GCCAGTCTTCACTTGAGGAACA 60.485 50.000 0.00 0.00 31.79 3.18
2226 2569 1.121378 GAGGGGCTACCAAGGAGTAC 58.879 60.000 0.00 0.00 43.89 2.73
2229 2572 2.091222 AGGGGCTACCAAGGAGTACTAG 60.091 54.545 0.00 0.00 43.89 2.57
2233 2576 4.386200 GGGCTACCAAGGAGTACTAGTAGT 60.386 50.000 10.09 10.09 37.97 2.73
2234 2577 5.163152 GGGCTACCAAGGAGTACTAGTAGTA 60.163 48.000 10.28 5.90 37.97 1.82
2341 2685 6.971184 GTCTTGCCATGATAGAAATTGTGAAG 59.029 38.462 0.00 0.00 0.00 3.02
2370 2714 3.882326 ATGGAGCCGCCCATGGAG 61.882 66.667 15.22 6.77 44.77 3.86
2373 2717 4.925861 GAGCCGCCCATGGAGCTC 62.926 72.222 25.75 25.75 41.13 4.09
2405 2749 0.962855 GAAGCTTCCTGGACAAGCCC 60.963 60.000 15.97 5.88 46.41 5.19
2406 2750 2.361737 GCTTCCTGGACAAGCCCC 60.362 66.667 8.87 0.00 40.45 5.80
2449 2794 7.447545 TCCTAGATATACCGTATATGTGCATCC 59.552 40.741 14.58 0.74 31.74 3.51
2474 2819 3.873361 CGAGGTCTAGACATACCGTACAA 59.127 47.826 23.91 0.00 40.88 2.41
2476 2821 5.163723 CGAGGTCTAGACATACCGTACAAAA 60.164 44.000 23.91 0.00 40.88 2.44
2483 2828 9.740239 TCTAGACATACCGTACAAAAATACATC 57.260 33.333 0.00 0.00 0.00 3.06
2490 2835 7.311364 ACCGTACAAAAATACATCCATACAC 57.689 36.000 0.00 0.00 0.00 2.90
2491 2836 6.879993 ACCGTACAAAAATACATCCATACACA 59.120 34.615 0.00 0.00 0.00 3.72
2492 2837 7.148373 ACCGTACAAAAATACATCCATACACAC 60.148 37.037 0.00 0.00 0.00 3.82
2493 2838 7.184106 CGTACAAAAATACATCCATACACACC 58.816 38.462 0.00 0.00 0.00 4.16
2539 2884 3.357770 GCACATTGCGCTACAAAAATG 57.642 42.857 9.73 11.60 42.86 2.32
2540 2885 2.730928 GCACATTGCGCTACAAAAATGT 59.269 40.909 13.84 13.84 42.86 2.71
2585 2947 4.638963 CGTCTCCTCGCAAAGAAAAATAC 58.361 43.478 0.00 0.00 0.00 1.89
2596 2958 1.467342 AGAAAAATACGGCGTCTTGGC 59.533 47.619 19.21 6.44 40.44 4.52
2599 2961 1.303091 AAATACGGCGTCTTGGCACC 61.303 55.000 19.21 0.00 45.16 5.01
2693 3062 8.443953 AGAAGAGATGCAATGGAGTATTTTAC 57.556 34.615 0.00 0.00 0.00 2.01
2748 3117 2.041216 ACTTTAACCCTGACCCATCCAC 59.959 50.000 0.00 0.00 0.00 4.02
2784 3153 7.607607 ACTGCTGCCGATAATATAATGAATCAA 59.392 33.333 0.00 0.00 0.00 2.57
2785 3154 7.751732 TGCTGCCGATAATATAATGAATCAAC 58.248 34.615 0.00 0.00 0.00 3.18
2787 3156 7.907045 GCTGCCGATAATATAATGAATCAACTG 59.093 37.037 0.00 0.00 0.00 3.16
2788 3157 7.751732 TGCCGATAATATAATGAATCAACTGC 58.248 34.615 0.00 0.00 0.00 4.40
2790 3159 7.907045 GCCGATAATATAATGAATCAACTGCTG 59.093 37.037 0.00 0.00 0.00 4.41
2882 3273 3.751518 ACCTCAACGCTTTGGTAGAAAT 58.248 40.909 2.78 0.00 33.06 2.17
2970 3361 1.210234 TCCATCCTACGTCCGTGTCTA 59.790 52.381 1.98 0.00 0.00 2.59
2983 3374 3.119602 TCCGTGTCTATGTCTTGTGTAGC 60.120 47.826 0.00 0.00 0.00 3.58
3040 3431 0.746204 GCTACTCTGCCTTGGCCTTC 60.746 60.000 3.32 0.00 0.00 3.46
3136 3528 1.671845 CTACTCTACGAGTGTGCCTCC 59.328 57.143 6.77 0.00 43.30 4.30
3137 3529 0.251209 ACTCTACGAGTGTGCCTCCA 60.251 55.000 0.00 0.00 41.76 3.86
3138 3530 0.171455 CTCTACGAGTGTGCCTCCAC 59.829 60.000 0.00 0.00 42.40 4.02
3139 3531 1.215647 CTACGAGTGTGCCTCCACC 59.784 63.158 0.00 0.00 41.35 4.61
3140 3532 1.228769 TACGAGTGTGCCTCCACCT 60.229 57.895 0.00 0.00 41.35 4.00
3142 3534 2.665603 GAGTGTGCCTCCACCTCC 59.334 66.667 0.00 0.00 41.35 4.30
3168 3576 1.345741 CCATGATCCATCTACGTGGCT 59.654 52.381 0.00 0.00 39.19 4.75
3219 3639 3.146726 GATGCGCCATGCCAATGCT 62.147 57.895 4.18 0.00 45.60 3.79
3327 3758 5.064834 GCCATGTACTAGTAGTTTTTGCCTC 59.935 44.000 8.40 0.00 0.00 4.70
3364 3795 2.106683 GCATGTGTACCGGCACTCC 61.107 63.158 6.34 0.00 39.89 3.85
3404 3835 0.667993 CAATAAATGCCATCGCCGGT 59.332 50.000 1.90 0.00 0.00 5.28
3443 3874 4.736896 GTGTGGCCCTCGTCCGTC 62.737 72.222 0.00 0.00 0.00 4.79
3588 4020 3.308473 GGACAATTTAGGGCTGAACCTCT 60.308 47.826 0.00 0.00 42.09 3.69
3589 4021 3.942115 GACAATTTAGGGCTGAACCTCTC 59.058 47.826 0.00 0.00 42.09 3.20
3651 4083 1.153765 CACAGCCGATCGAGCTCAA 60.154 57.895 22.80 0.00 38.95 3.02
3722 4159 0.823769 TCCACGATCGGAGAGGATGG 60.824 60.000 20.98 15.55 43.63 3.51
3725 4162 2.936912 CGATCGGAGAGGATGGGGC 61.937 68.421 7.38 0.00 43.63 5.80
3726 4163 2.527875 ATCGGAGAGGATGGGGCC 60.528 66.667 0.00 0.00 43.63 5.80
4003 4443 1.138036 CCCAGTGCAATGCATCACG 59.862 57.895 12.38 0.01 41.91 4.35
4055 4499 2.285592 TCTGCATGGCTCCCCTGA 60.286 61.111 0.00 0.00 0.00 3.86
4288 5596 1.810532 CCTGCCTCTCCTCGTGTAC 59.189 63.158 0.00 0.00 0.00 2.90
4377 5691 1.568504 TAGGAACATCACCTCGGCTT 58.431 50.000 0.00 0.00 38.76 4.35
4403 5717 3.852286 CACCAGTGCAATGCATTAATGT 58.148 40.909 12.38 2.58 41.91 2.71
4405 5719 5.409211 CACCAGTGCAATGCATTAATGTTA 58.591 37.500 12.38 7.10 41.91 2.41
4410 5724 4.204978 GTGCAATGCATTAATGTTAGCGAC 59.795 41.667 12.38 6.97 41.91 5.19
4428 5742 1.277739 CGCGCAGTGCTGGAATATG 59.722 57.895 14.33 0.00 43.27 1.78
4472 5786 2.404559 ACAGGGAGGTCTTGTTACACA 58.595 47.619 0.00 0.00 0.00 3.72
4589 5911 8.810427 GTTCATGCATTCATTATGTTCGATTTT 58.190 29.630 0.00 0.00 36.57 1.82
4650 5973 1.629013 TTGTCTGTAATCGAGCAGCG 58.371 50.000 8.89 0.00 42.69 5.18
4724 6050 5.751028 CCATCTTGAAAGCTACTACTGCTAC 59.249 44.000 0.00 0.00 40.22 3.58
4739 6065 0.454957 GCTACATGCAGCAACGTTGG 60.455 55.000 28.33 14.58 41.40 3.77
4764 6090 1.279271 ACACAGAGGTAATGAGGCCAC 59.721 52.381 5.01 0.00 0.00 5.01
4799 6127 7.835822 AGATTTGATATCTCGATAAGGTGGAG 58.164 38.462 3.98 0.00 34.29 3.86
4805 6133 1.002251 CTCGATAAGGTGGAGAGCGAC 60.002 57.143 0.00 0.00 34.88 5.19
4832 6160 1.615392 ACCTGCAGAATTTTGACCAGC 59.385 47.619 17.39 0.00 0.00 4.85
4853 6181 1.394532 TCCCTCTTCCAGTAGGAGGT 58.605 55.000 0.00 0.00 46.74 3.85
4917 6247 1.862123 CAACAGTACCTGCACAGCG 59.138 57.895 0.00 0.00 34.37 5.18
4982 6312 1.332997 GACCTGACCGGACATAGTACG 59.667 57.143 9.46 0.00 39.92 3.67
5004 6334 1.729149 GCAACAGCGACATTTGCTACC 60.729 52.381 0.00 0.00 41.72 3.18
5034 6364 3.917760 GCTCCGAGTCCCGATGGG 61.918 72.222 0.00 0.00 46.11 4.00
5066 6397 2.957680 GCCCCTCTTCTGGTAGTAGTAC 59.042 54.545 0.00 0.00 0.00 2.73
5087 6418 2.410730 CGTACGTTGTTGGACCATCTTC 59.589 50.000 7.22 0.00 0.00 2.87
5173 6508 1.878953 TTCAACTGGCTTCGAGGAAC 58.121 50.000 0.00 0.00 0.00 3.62
5176 6511 2.158813 TCAACTGGCTTCGAGGAACTTT 60.159 45.455 0.00 0.00 41.55 2.66
5209 6544 8.226448 CAGCTCGATCCATGAACTTAATTATTC 58.774 37.037 0.00 0.00 0.00 1.75
5575 6912 0.811616 GCTCGTCAAGGTATGCCCAG 60.812 60.000 0.00 0.00 34.66 4.45
5576 6913 0.824109 CTCGTCAAGGTATGCCCAGA 59.176 55.000 0.00 0.00 34.66 3.86
5589 6926 5.594317 GGTATGCCCAGATGTTACATTTCTT 59.406 40.000 0.00 0.00 0.00 2.52
5595 6932 6.808704 GCCCAGATGTTACATTTCTTTTCTTC 59.191 38.462 0.00 0.00 0.00 2.87
5597 6934 9.231297 CCCAGATGTTACATTTCTTTTCTTCTA 57.769 33.333 0.00 0.00 0.00 2.10
5613 6971 7.923414 TTTCTTCTATCTTCTGGGCTTTTAC 57.077 36.000 0.00 0.00 0.00 2.01
5641 6999 0.907704 TCGACTACATGGGCCCAAGT 60.908 55.000 33.50 33.50 0.00 3.16
5703 7061 0.609131 GGCTTGGGCTTCAACTGCTA 60.609 55.000 0.00 0.00 38.73 3.49
5708 7066 0.673644 GGGCTTCAACTGCTAGCGAA 60.674 55.000 10.77 6.43 35.77 4.70
5709 7067 0.723981 GGCTTCAACTGCTAGCGAAG 59.276 55.000 19.80 19.80 38.30 3.79
5710 7068 1.433534 GCTTCAACTGCTAGCGAAGT 58.566 50.000 22.86 14.62 37.71 3.01
5711 7069 1.127582 GCTTCAACTGCTAGCGAAGTG 59.872 52.381 22.86 13.80 37.71 3.16
5712 7070 2.408050 CTTCAACTGCTAGCGAAGTGT 58.592 47.619 17.24 6.62 32.10 3.55
5713 7071 2.526304 TCAACTGCTAGCGAAGTGTT 57.474 45.000 10.77 7.08 0.00 3.32
5714 7072 2.135139 TCAACTGCTAGCGAAGTGTTG 58.865 47.619 20.77 20.77 40.19 3.33
5716 7074 1.784525 ACTGCTAGCGAAGTGTTGTC 58.215 50.000 10.77 0.00 0.00 3.18
5717 7075 0.710567 CTGCTAGCGAAGTGTTGTCG 59.289 55.000 10.77 0.00 41.46 4.35
5719 7077 1.267533 TGCTAGCGAAGTGTTGTCGTA 59.732 47.619 10.77 0.00 40.64 3.43
5720 7078 1.912110 GCTAGCGAAGTGTTGTCGTAG 59.088 52.381 0.00 0.00 40.64 3.51
5721 7079 2.516923 CTAGCGAAGTGTTGTCGTAGG 58.483 52.381 0.00 0.00 40.64 3.18
5723 7081 1.623973 GCGAAGTGTTGTCGTAGGGC 61.624 60.000 0.00 0.00 40.64 5.19
5724 7082 0.038526 CGAAGTGTTGTCGTAGGGCT 60.039 55.000 0.00 0.00 33.80 5.19
5725 7083 1.711206 GAAGTGTTGTCGTAGGGCTC 58.289 55.000 0.00 0.00 0.00 4.70
5799 7171 2.097825 GTCTTTAGTCCCACCTCGCTA 58.902 52.381 0.00 0.00 0.00 4.26
5848 7220 1.369692 CGAAGGGTAGCACACACCA 59.630 57.895 0.00 0.00 37.84 4.17
5850 7222 0.605589 GAAGGGTAGCACACACCACC 60.606 60.000 0.00 0.00 37.84 4.61
5893 7265 0.547471 TTGGCATCTCCCCTGACAGA 60.547 55.000 3.32 0.00 32.07 3.41
5894 7266 0.547471 TGGCATCTCCCCTGACAGAA 60.547 55.000 3.32 0.00 0.00 3.02
6165 7650 2.313172 CGACTGCACAGCGCTCTTT 61.313 57.895 7.13 0.00 43.06 2.52
6233 7718 1.375396 TGTGCACCGCTACATCCAC 60.375 57.895 15.69 0.00 0.00 4.02
6247 7733 3.679389 ACATCCACAATCTCTTTTCGCT 58.321 40.909 0.00 0.00 0.00 4.93
6248 7734 3.438087 ACATCCACAATCTCTTTTCGCTG 59.562 43.478 0.00 0.00 0.00 5.18
6252 7738 1.461127 ACAATCTCTTTTCGCTGTCGC 59.539 47.619 0.00 0.00 35.26 5.19
6253 7739 1.728971 CAATCTCTTTTCGCTGTCGCT 59.271 47.619 0.00 0.00 35.26 4.93
6262 7748 1.225936 CGCTGTCGCTGCATTTGAG 60.226 57.895 0.00 0.00 0.00 3.02
6276 7762 5.049167 TGCATTTGAGTTTTGACACCATTC 58.951 37.500 0.00 0.00 0.00 2.67
6278 7764 5.176223 GCATTTGAGTTTTGACACCATTCTG 59.824 40.000 0.00 0.00 0.00 3.02
6279 7765 3.988379 TGAGTTTTGACACCATTCTGC 57.012 42.857 0.00 0.00 0.00 4.26
6280 7766 2.290367 TGAGTTTTGACACCATTCTGCG 59.710 45.455 0.00 0.00 0.00 5.18
6281 7767 1.001378 AGTTTTGACACCATTCTGCGC 60.001 47.619 0.00 0.00 0.00 6.09
6282 7768 0.040514 TTTTGACACCATTCTGCGCG 60.041 50.000 0.00 0.00 0.00 6.86
6663 8150 0.527385 GAGATCCTGCAGACGCTCAC 60.527 60.000 17.39 1.15 39.64 3.51
6694 8181 4.681978 GACGTCAACGCCAGGGCT 62.682 66.667 11.55 0.00 44.43 5.19
7351 8838 2.124983 GCGAGAGAAGGCCATGCA 60.125 61.111 5.01 0.00 0.00 3.96
7352 8839 1.746615 GCGAGAGAAGGCCATGCAA 60.747 57.895 5.01 0.00 0.00 4.08
7378 8865 1.470996 GCGAGCTCCTGATCTCCCAT 61.471 60.000 8.47 0.00 0.00 4.00
7583 9070 2.942796 AAGTCGCTGCGGATGGTCA 61.943 57.895 23.03 0.00 0.00 4.02
7825 9312 4.479993 GGCATCAGGGCGCTCACT 62.480 66.667 11.40 1.29 33.57 3.41
7856 9343 2.124695 GCAAGCGGGGGAACTAGG 60.125 66.667 0.00 0.00 0.00 3.02
7888 9378 0.389948 CTTCGCTCCGTGTAGGCTTT 60.390 55.000 0.00 0.00 40.77 3.51
7978 9477 0.035820 GATGCGTGGAGTTTGGGGTA 60.036 55.000 0.00 0.00 0.00 3.69
7985 9484 1.037579 GGAGTTTGGGGTATGCTGGC 61.038 60.000 0.00 0.00 0.00 4.85
8189 9696 1.480137 CTTCCCCAGTTTTTGCACACA 59.520 47.619 0.00 0.00 0.00 3.72
8190 9697 0.820871 TCCCCAGTTTTTGCACACAC 59.179 50.000 0.00 0.00 0.00 3.82
8191 9698 0.534412 CCCCAGTTTTTGCACACACA 59.466 50.000 0.00 0.00 0.00 3.72
8194 9701 3.070018 CCCAGTTTTTGCACACACAAAA 58.930 40.909 0.00 0.00 45.29 2.44
8223 9730 2.832672 GGAATGCCGTTTCTTAGCAG 57.167 50.000 0.00 0.00 40.40 4.24
8237 9744 7.405769 GTTTCTTAGCAGAAGTGATCTATTGC 58.594 38.462 0.00 0.00 40.28 3.56
8251 9758 6.367149 GTGATCTATTGCTCAAGATTATGCGA 59.633 38.462 0.00 0.00 32.60 5.10
8252 9759 6.367149 TGATCTATTGCTCAAGATTATGCGAC 59.633 38.462 0.00 0.00 32.60 5.19
8253 9760 4.991056 TCTATTGCTCAAGATTATGCGACC 59.009 41.667 0.00 0.00 0.00 4.79
8254 9761 2.988010 TGCTCAAGATTATGCGACCT 57.012 45.000 0.00 0.00 0.00 3.85
8256 9763 1.869767 GCTCAAGATTATGCGACCTGG 59.130 52.381 0.00 0.00 0.00 4.45
8257 9764 2.483714 GCTCAAGATTATGCGACCTGGA 60.484 50.000 0.00 0.00 0.00 3.86
8258 9765 3.388308 CTCAAGATTATGCGACCTGGAG 58.612 50.000 0.00 0.00 0.00 3.86
8259 9766 2.103094 TCAAGATTATGCGACCTGGAGG 59.897 50.000 0.00 0.00 42.17 4.30
8261 9768 2.398588 AGATTATGCGACCTGGAGGAA 58.601 47.619 0.00 0.00 38.94 3.36
8262 9769 2.771943 AGATTATGCGACCTGGAGGAAA 59.228 45.455 0.00 0.00 38.94 3.13
8263 9770 3.392616 AGATTATGCGACCTGGAGGAAAT 59.607 43.478 0.00 0.00 38.94 2.17
8264 9771 2.910688 TATGCGACCTGGAGGAAATC 57.089 50.000 0.00 0.00 38.94 2.17
8265 9772 0.179073 ATGCGACCTGGAGGAAATCG 60.179 55.000 0.00 0.00 38.94 3.34
8266 9773 1.254975 TGCGACCTGGAGGAAATCGA 61.255 55.000 0.00 0.00 34.38 3.59
8267 9774 0.806492 GCGACCTGGAGGAAATCGAC 60.806 60.000 0.00 0.00 34.38 4.20
8268 9775 0.530744 CGACCTGGAGGAAATCGACA 59.469 55.000 0.00 0.00 34.38 4.35
8269 9776 1.736032 CGACCTGGAGGAAATCGACAC 60.736 57.143 0.00 0.00 34.38 3.67
8273 9780 1.202582 CTGGAGGAAATCGACACGACT 59.797 52.381 0.00 0.00 39.18 4.18
8275 9782 2.821378 TGGAGGAAATCGACACGACTTA 59.179 45.455 0.00 0.00 39.18 2.24
8277 9784 3.797256 GGAGGAAATCGACACGACTTATG 59.203 47.826 0.00 0.00 39.18 1.90
8278 9785 4.439700 GGAGGAAATCGACACGACTTATGA 60.440 45.833 0.00 0.00 39.18 2.15
8280 9787 6.387041 AGGAAATCGACACGACTTATGATA 57.613 37.500 0.00 0.00 39.18 2.15
8281 9788 6.802608 AGGAAATCGACACGACTTATGATAA 58.197 36.000 0.00 0.00 39.18 1.75
8282 9789 7.434492 AGGAAATCGACACGACTTATGATAAT 58.566 34.615 0.00 0.00 39.18 1.28
8283 9790 7.382488 AGGAAATCGACACGACTTATGATAATG 59.618 37.037 0.00 0.00 39.18 1.90
8284 9791 7.169308 GGAAATCGACACGACTTATGATAATGT 59.831 37.037 0.00 0.00 39.18 2.71
8285 9792 9.177304 GAAATCGACACGACTTATGATAATGTA 57.823 33.333 0.00 0.00 39.18 2.29
8286 9793 9.524106 AAATCGACACGACTTATGATAATGTAA 57.476 29.630 0.00 0.00 39.18 2.41
8288 9795 8.914328 TCGACACGACTTATGATAATGTAAAA 57.086 30.769 0.00 0.00 0.00 1.52
8324 9831 8.413229 ACATTTTGGAATATATTTTGAGACGGG 58.587 33.333 0.00 0.00 0.00 5.28
8325 9832 8.629158 CATTTTGGAATATATTTTGAGACGGGA 58.371 33.333 0.00 0.00 0.00 5.14
8326 9833 7.801716 TTTGGAATATATTTTGAGACGGGAG 57.198 36.000 0.00 0.00 0.00 4.30
8339 9846 0.395312 ACGGGAGTAGTTGTGGTTGG 59.605 55.000 0.00 0.00 44.60 3.77
8340 9847 0.682852 CGGGAGTAGTTGTGGTTGGA 59.317 55.000 0.00 0.00 0.00 3.53
8341 9848 1.071071 CGGGAGTAGTTGTGGTTGGAA 59.929 52.381 0.00 0.00 0.00 3.53
8342 9849 2.485835 CGGGAGTAGTTGTGGTTGGAAA 60.486 50.000 0.00 0.00 0.00 3.13
8343 9850 3.558033 GGGAGTAGTTGTGGTTGGAAAA 58.442 45.455 0.00 0.00 0.00 2.29
8344 9851 3.568430 GGGAGTAGTTGTGGTTGGAAAAG 59.432 47.826 0.00 0.00 0.00 2.27
8345 9852 4.457466 GGAGTAGTTGTGGTTGGAAAAGA 58.543 43.478 0.00 0.00 0.00 2.52
8346 9853 4.515567 GGAGTAGTTGTGGTTGGAAAAGAG 59.484 45.833 0.00 0.00 0.00 2.85
8347 9854 4.461198 AGTAGTTGTGGTTGGAAAAGAGG 58.539 43.478 0.00 0.00 0.00 3.69
8348 9855 3.382083 AGTTGTGGTTGGAAAAGAGGT 57.618 42.857 0.00 0.00 0.00 3.85
8349 9856 3.288092 AGTTGTGGTTGGAAAAGAGGTC 58.712 45.455 0.00 0.00 0.00 3.85
8350 9857 3.020984 GTTGTGGTTGGAAAAGAGGTCA 58.979 45.455 0.00 0.00 0.00 4.02
8351 9858 3.374042 TGTGGTTGGAAAAGAGGTCAA 57.626 42.857 0.00 0.00 0.00 3.18
8352 9859 3.909732 TGTGGTTGGAAAAGAGGTCAAT 58.090 40.909 0.00 0.00 0.00 2.57
8353 9860 3.636300 TGTGGTTGGAAAAGAGGTCAATG 59.364 43.478 0.00 0.00 0.00 2.82
8354 9861 3.636764 GTGGTTGGAAAAGAGGTCAATGT 59.363 43.478 0.00 0.00 0.00 2.71
8355 9862 4.099419 GTGGTTGGAAAAGAGGTCAATGTT 59.901 41.667 0.00 0.00 0.00 2.71
8356 9863 4.099266 TGGTTGGAAAAGAGGTCAATGTTG 59.901 41.667 0.00 0.00 0.00 3.33
8357 9864 4.501400 GGTTGGAAAAGAGGTCAATGTTGG 60.501 45.833 0.00 0.00 0.00 3.77
8358 9865 2.627699 TGGAAAAGAGGTCAATGTTGGC 59.372 45.455 0.00 0.00 0.00 4.52
8359 9866 2.893489 GGAAAAGAGGTCAATGTTGGCT 59.107 45.455 0.00 0.00 32.28 4.75
8360 9867 3.057245 GGAAAAGAGGTCAATGTTGGCTC 60.057 47.826 0.00 0.00 32.28 4.70
8361 9868 2.206576 AAGAGGTCAATGTTGGCTCC 57.793 50.000 0.00 0.00 32.28 4.70
8362 9869 1.067295 AGAGGTCAATGTTGGCTCCA 58.933 50.000 0.00 0.00 32.28 3.86
8363 9870 1.004044 AGAGGTCAATGTTGGCTCCAG 59.996 52.381 0.00 0.00 32.28 3.86
8364 9871 0.038744 AGGTCAATGTTGGCTCCAGG 59.961 55.000 0.00 0.00 32.28 4.45
8365 9872 0.251341 GGTCAATGTTGGCTCCAGGT 60.251 55.000 0.00 0.00 32.28 4.00
8366 9873 1.168714 GTCAATGTTGGCTCCAGGTC 58.831 55.000 0.00 0.00 0.00 3.85
8367 9874 0.321564 TCAATGTTGGCTCCAGGTCG 60.322 55.000 0.00 0.00 0.00 4.79
8368 9875 0.321564 CAATGTTGGCTCCAGGTCGA 60.322 55.000 0.00 0.00 0.00 4.20
8369 9876 0.400213 AATGTTGGCTCCAGGTCGAA 59.600 50.000 0.00 0.00 0.00 3.71
8370 9877 0.036010 ATGTTGGCTCCAGGTCGAAG 60.036 55.000 0.00 0.00 0.00 3.79
8371 9878 1.118965 TGTTGGCTCCAGGTCGAAGA 61.119 55.000 0.00 0.00 0.00 2.87
8372 9879 0.034896 GTTGGCTCCAGGTCGAAGAA 59.965 55.000 0.00 0.00 39.69 2.52
8373 9880 0.984230 TTGGCTCCAGGTCGAAGAAT 59.016 50.000 0.00 0.00 39.69 2.40
8374 9881 0.984230 TGGCTCCAGGTCGAAGAATT 59.016 50.000 0.00 0.00 39.69 2.17
8375 9882 1.339055 TGGCTCCAGGTCGAAGAATTG 60.339 52.381 0.00 0.00 39.69 2.32
8376 9883 1.066143 GGCTCCAGGTCGAAGAATTGA 60.066 52.381 0.00 0.00 39.69 2.57
8377 9884 2.003301 GCTCCAGGTCGAAGAATTGAC 58.997 52.381 0.00 0.00 39.69 3.18
8386 9893 5.613358 GTCGAAGAATTGACCAAGTTCAT 57.387 39.130 0.00 0.00 39.69 2.57
8387 9894 5.622378 GTCGAAGAATTGACCAAGTTCATC 58.378 41.667 0.00 0.00 39.69 2.92
8388 9895 5.179368 GTCGAAGAATTGACCAAGTTCATCA 59.821 40.000 0.00 0.00 39.69 3.07
8389 9896 5.762711 TCGAAGAATTGACCAAGTTCATCAA 59.237 36.000 1.72 1.72 36.81 2.57
8390 9897 6.073058 TCGAAGAATTGACCAAGTTCATCAAG 60.073 38.462 4.97 0.00 35.89 3.02
8391 9898 6.293626 CGAAGAATTGACCAAGTTCATCAAGT 60.294 38.462 4.97 2.41 35.89 3.16
8392 9899 6.566197 AGAATTGACCAAGTTCATCAAGTC 57.434 37.500 14.13 14.13 44.00 3.01
8393 9900 5.180117 AGAATTGACCAAGTTCATCAAGTCG 59.820 40.000 15.26 0.00 46.63 4.18
8394 9901 3.744238 TGACCAAGTTCATCAAGTCGA 57.256 42.857 0.00 0.00 0.00 4.20
8395 9902 3.653344 TGACCAAGTTCATCAAGTCGAG 58.347 45.455 0.00 0.00 0.00 4.04
8396 9903 3.320826 TGACCAAGTTCATCAAGTCGAGA 59.679 43.478 0.00 0.00 0.00 4.04
8397 9904 4.202212 TGACCAAGTTCATCAAGTCGAGAA 60.202 41.667 0.00 0.00 0.00 2.87
8398 9905 4.703897 ACCAAGTTCATCAAGTCGAGAAA 58.296 39.130 0.00 0.00 0.00 2.52
8399 9906 4.752101 ACCAAGTTCATCAAGTCGAGAAAG 59.248 41.667 0.00 0.00 0.00 2.62
8400 9907 4.153117 CCAAGTTCATCAAGTCGAGAAAGG 59.847 45.833 0.00 0.00 0.00 3.11
8401 9908 3.931578 AGTTCATCAAGTCGAGAAAGGG 58.068 45.455 0.00 0.00 0.00 3.95
8402 9909 2.386661 TCATCAAGTCGAGAAAGGGC 57.613 50.000 0.00 0.00 0.00 5.19
8403 9910 1.902508 TCATCAAGTCGAGAAAGGGCT 59.097 47.619 0.00 0.00 0.00 5.19
8404 9911 3.096852 TCATCAAGTCGAGAAAGGGCTA 58.903 45.455 0.00 0.00 0.00 3.93
8405 9912 3.131223 TCATCAAGTCGAGAAAGGGCTAG 59.869 47.826 0.00 0.00 0.00 3.42
8406 9913 1.825474 TCAAGTCGAGAAAGGGCTAGG 59.175 52.381 0.00 0.00 0.00 3.02
8407 9914 1.825474 CAAGTCGAGAAAGGGCTAGGA 59.175 52.381 0.00 0.00 0.00 2.94
8408 9915 2.233305 AGTCGAGAAAGGGCTAGGAA 57.767 50.000 0.00 0.00 0.00 3.36
8409 9916 2.537143 AGTCGAGAAAGGGCTAGGAAA 58.463 47.619 0.00 0.00 0.00 3.13
8410 9917 2.498078 AGTCGAGAAAGGGCTAGGAAAG 59.502 50.000 0.00 0.00 0.00 2.62
8411 9918 1.831736 TCGAGAAAGGGCTAGGAAAGG 59.168 52.381 0.00 0.00 0.00 3.11
8412 9919 1.134371 CGAGAAAGGGCTAGGAAAGGG 60.134 57.143 0.00 0.00 0.00 3.95
8413 9920 1.916874 GAGAAAGGGCTAGGAAAGGGT 59.083 52.381 0.00 0.00 0.00 4.34
8414 9921 2.309162 GAGAAAGGGCTAGGAAAGGGTT 59.691 50.000 0.00 0.00 0.00 4.11
8415 9922 2.722458 AGAAAGGGCTAGGAAAGGGTTT 59.278 45.455 0.00 0.00 0.00 3.27
8416 9923 3.920841 AGAAAGGGCTAGGAAAGGGTTTA 59.079 43.478 0.00 0.00 0.00 2.01
8417 9924 4.355889 AGAAAGGGCTAGGAAAGGGTTTAA 59.644 41.667 0.00 0.00 0.00 1.52
8418 9925 4.752621 AAGGGCTAGGAAAGGGTTTAAA 57.247 40.909 0.00 0.00 0.00 1.52
8419 9926 4.967209 AGGGCTAGGAAAGGGTTTAAAT 57.033 40.909 0.00 0.00 0.00 1.40
8420 9927 4.610333 AGGGCTAGGAAAGGGTTTAAATG 58.390 43.478 0.00 0.00 0.00 2.32
8421 9928 4.293901 AGGGCTAGGAAAGGGTTTAAATGA 59.706 41.667 0.00 0.00 0.00 2.57
8422 9929 5.043356 AGGGCTAGGAAAGGGTTTAAATGAT 60.043 40.000 0.00 0.00 0.00 2.45
8423 9930 5.302059 GGGCTAGGAAAGGGTTTAAATGATC 59.698 44.000 0.00 0.00 0.00 2.92
8424 9931 6.129874 GGCTAGGAAAGGGTTTAAATGATCT 58.870 40.000 0.00 0.00 0.00 2.75
8425 9932 6.607600 GGCTAGGAAAGGGTTTAAATGATCTT 59.392 38.462 0.00 0.00 0.00 2.40
8426 9933 7.778382 GGCTAGGAAAGGGTTTAAATGATCTTA 59.222 37.037 0.00 0.00 0.00 2.10
8427 9934 9.355916 GCTAGGAAAGGGTTTAAATGATCTTAT 57.644 33.333 0.00 0.00 0.00 1.73
8448 9955 9.146586 TCTTATATTTTGATTTTGGGATGGAGG 57.853 33.333 0.00 0.00 0.00 4.30
8449 9956 6.752285 ATATTTTGATTTTGGGATGGAGGG 57.248 37.500 0.00 0.00 0.00 4.30
8450 9957 3.843177 TTTGATTTTGGGATGGAGGGA 57.157 42.857 0.00 0.00 0.00 4.20
8451 9958 3.386932 TTGATTTTGGGATGGAGGGAG 57.613 47.619 0.00 0.00 0.00 4.30
8490 9997 3.915437 AAACATACCAAAAGCGACCTG 57.085 42.857 0.00 0.00 0.00 4.00
8508 10015 5.007039 CGACCTGTTGATCAAGATTATGTGG 59.993 44.000 8.80 6.57 0.00 4.17
8511 10018 6.069673 ACCTGTTGATCAAGATTATGTGGGTA 60.070 38.462 8.80 0.00 0.00 3.69
8512 10019 6.828273 CCTGTTGATCAAGATTATGTGGGTAA 59.172 38.462 8.80 0.00 0.00 2.85
8513 10020 7.503566 CCTGTTGATCAAGATTATGTGGGTAAT 59.496 37.037 8.80 0.00 0.00 1.89
8516 10023 8.345565 GTTGATCAAGATTATGTGGGTAATCAC 58.654 37.037 8.80 0.00 41.42 3.06
8526 10033 5.080969 TGTGGGTAATCACAGCTAGTAAC 57.919 43.478 0.00 0.00 42.05 2.50
8527 10034 4.528987 TGTGGGTAATCACAGCTAGTAACA 59.471 41.667 0.00 0.00 42.05 2.41
8528 10035 5.109903 GTGGGTAATCACAGCTAGTAACAG 58.890 45.833 0.00 0.00 37.57 3.16
8529 10036 5.020795 TGGGTAATCACAGCTAGTAACAGA 58.979 41.667 0.00 0.00 0.00 3.41
8530 10037 5.661312 TGGGTAATCACAGCTAGTAACAGAT 59.339 40.000 0.00 0.00 0.00 2.90
8531 10038 6.837048 TGGGTAATCACAGCTAGTAACAGATA 59.163 38.462 0.00 0.00 0.00 1.98
8545 10052 4.705337 AACAGATAAGACTCCGACAGAC 57.295 45.455 0.00 0.00 0.00 3.51
8560 10088 0.249489 CAGACGGCCAGGCATAGTAC 60.249 60.000 15.19 4.84 0.00 2.73
8564 10092 1.151777 CGGCCAGGCATAGTACAACG 61.152 60.000 15.19 0.00 0.00 4.10
8579 10107 1.134220 ACAACGGCTGAACAGGAGAAA 60.134 47.619 0.00 0.00 0.00 2.52
8585 10113 3.686016 GGCTGAACAGGAGAAACCATAA 58.314 45.455 3.99 0.00 42.04 1.90
8589 10117 4.599041 TGAACAGGAGAAACCATAATGGG 58.401 43.478 0.00 0.00 43.37 4.00
8594 10130 2.427095 GGAGAAACCATAATGGGCACAC 59.573 50.000 0.00 0.00 43.37 3.82
8599 10135 5.957774 AGAAACCATAATGGGCACACTAAAT 59.042 36.000 0.00 0.00 43.37 1.40
8603 10139 4.889409 CCATAATGGGCACACTAAATCAGT 59.111 41.667 0.00 0.00 33.41 3.41
8629 10166 6.908870 TCATTCTCAAGTATCAATTCGTGG 57.091 37.500 0.00 0.00 0.00 4.94
8639 10176 3.241067 TCAATTCGTGGCTACCTACAC 57.759 47.619 0.00 0.00 0.00 2.90
8647 10184 3.069016 CGTGGCTACCTACACCATAATCA 59.931 47.826 0.00 0.00 35.53 2.57
8653 10190 6.038271 GGCTACCTACACCATAATCAAAGTTG 59.962 42.308 0.00 0.00 0.00 3.16
8707 10244 7.545265 GGCTATCACATTGTTTTGAATTGCTAA 59.455 33.333 0.00 0.00 0.00 3.09
8708 10245 8.375465 GCTATCACATTGTTTTGAATTGCTAAC 58.625 33.333 0.00 0.00 0.00 2.34
8709 10246 9.409312 CTATCACATTGTTTTGAATTGCTAACA 57.591 29.630 0.00 0.00 0.00 2.41
8710 10247 8.659925 ATCACATTGTTTTGAATTGCTAACAA 57.340 26.923 0.00 0.00 42.57 2.83
8712 10249 9.755804 TCACATTGTTTTGAATTGCTAACAATA 57.244 25.926 15.45 4.60 45.90 1.90
8715 10252 9.976255 CATTGTTTTGAATTGCTAACAATATGG 57.024 29.630 15.45 6.05 45.90 2.74
8716 10253 7.593875 TGTTTTGAATTGCTAACAATATGGC 57.406 32.000 0.00 0.00 45.90 4.40
8717 10254 7.385267 TGTTTTGAATTGCTAACAATATGGCT 58.615 30.769 0.00 0.00 45.90 4.75
8739 10276 5.182380 GCTACAATGCCACAAGGTAAAACTA 59.818 40.000 0.00 0.00 37.19 2.24
8741 10278 6.664428 ACAATGCCACAAGGTAAAACTATT 57.336 33.333 0.00 0.00 37.19 1.73
8745 10282 8.686334 CAATGCCACAAGGTAAAACTATTATCT 58.314 33.333 0.00 0.00 37.19 1.98
8759 10296 6.974932 ACTATTATCTTTGATATGGCTGCG 57.025 37.500 0.00 0.00 0.00 5.18
8786 10323 0.607489 AGTGGCTCAACATCACTGGC 60.607 55.000 0.00 0.00 39.89 4.85
8816 10353 5.756833 AGTTGTGTAAGGTAAACGAAGGAAG 59.243 40.000 0.00 0.00 0.00 3.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 3.627123 CCATATGTGCCAAATCGAGACAA 59.373 43.478 1.24 0.00 0.00 3.18
16 17 2.810274 CTCCCATATGTGCCAAATCGAG 59.190 50.000 1.24 0.00 0.00 4.04
40 41 0.250234 CATTCCTTCCAGCACTCCGA 59.750 55.000 0.00 0.00 0.00 4.55
45 46 2.098770 GCAGATTCATTCCTTCCAGCAC 59.901 50.000 0.00 0.00 0.00 4.40
62 64 1.380380 TCGGATGAGGAGCAGCAGA 60.380 57.895 0.00 0.00 34.78 4.26
112 114 5.568620 ACTGGTGTTGGAAGATTAACTCT 57.431 39.130 0.00 0.00 34.96 3.24
118 120 5.197451 TGTTTGTACTGGTGTTGGAAGATT 58.803 37.500 0.00 0.00 0.00 2.40
132 134 0.536233 TGCGGGCACATGTTTGTACT 60.536 50.000 0.00 0.00 33.76 2.73
153 155 1.736681 ACGTAGAAGTCTCACGCCTAC 59.263 52.381 0.00 0.00 39.23 3.18
166 168 2.289444 CCAAAGAGGGCTTGACGTAGAA 60.289 50.000 0.00 0.00 33.79 2.10
219 224 4.309933 CACCGAAATAGCAGCATATGAGA 58.690 43.478 6.97 0.00 0.00 3.27
224 229 3.202906 GTTCCACCGAAATAGCAGCATA 58.797 45.455 0.00 0.00 0.00 3.14
246 251 2.819608 ACACCAATCCCAGATTTGTTCG 59.180 45.455 0.00 0.00 0.00 3.95
272 278 5.128171 CACAATGACCCAGATGATCCAAAAT 59.872 40.000 0.00 0.00 0.00 1.82
364 370 4.090057 GCCAAACGGACAGCTCGC 62.090 66.667 0.00 0.00 0.00 5.03
384 390 3.191162 CACATCGGCAAATTCTTCCTTCA 59.809 43.478 0.00 0.00 0.00 3.02
385 391 3.762779 CACATCGGCAAATTCTTCCTTC 58.237 45.455 0.00 0.00 0.00 3.46
386 392 2.094545 GCACATCGGCAAATTCTTCCTT 60.095 45.455 0.00 0.00 0.00 3.36
393 399 3.383620 TGAAAAGCACATCGGCAAATT 57.616 38.095 0.00 0.00 35.83 1.82
469 475 2.020694 GCCAAGACAGATCCCACCATG 61.021 57.143 0.00 0.00 0.00 3.66
484 490 0.109342 ACACCTTGACCTCAGCCAAG 59.891 55.000 0.00 0.00 39.43 3.61
514 520 1.444553 GAACGACGCAGAGTGGAGG 60.445 63.158 0.00 0.00 32.54 4.30
547 553 6.318144 AGACATGAGCTAAAACATGAAGATGG 59.682 38.462 17.39 0.00 44.28 3.51
606 612 6.876257 GCAATCCGGAGTAGAATGAGAAATAT 59.124 38.462 11.34 0.00 0.00 1.28
659 665 2.936498 CGTCGGCCTTTATTGATGAAGT 59.064 45.455 0.00 0.00 0.00 3.01
663 669 2.936498 AGAACGTCGGCCTTTATTGATG 59.064 45.455 0.00 0.00 0.00 3.07
713 719 4.416738 GCTGCCAGGTGGGGTCTC 62.417 72.222 0.00 0.00 37.04 3.36
720 726 3.688159 GCTTTGGGCTGCCAGGTG 61.688 66.667 22.05 8.70 38.06 4.00
733 739 1.693083 GAACGATACTGGCGCGCTTT 61.693 55.000 32.29 17.47 0.00 3.51
745 751 4.081862 ACAAGAGGGAACGATTGAACGATA 60.082 41.667 0.00 0.00 35.46 2.92
782 788 0.398381 GGAGCCTGATGGGAGAGAGT 60.398 60.000 0.00 0.00 37.23 3.24
906 1154 4.776647 GCGCGGTGAATTGGGTGC 62.777 66.667 8.83 0.00 0.00 5.01
1028 1280 1.063321 CGATCTCTCCGTGTCTGTCTG 59.937 57.143 0.00 0.00 0.00 3.51
1079 1331 0.324285 AGAGAGCTTGCTCCTGTTGG 59.676 55.000 17.78 0.00 35.49 3.77
1095 1347 1.156645 GCAGCACCGCCATTCTAGAG 61.157 60.000 0.00 0.00 0.00 2.43
1461 1713 0.512952 CAAAACGACGAAGCAGGGAG 59.487 55.000 0.00 0.00 0.00 4.30
1462 1714 0.882927 CCAAAACGACGAAGCAGGGA 60.883 55.000 0.00 0.00 0.00 4.20
1464 1716 1.574428 CCCAAAACGACGAAGCAGG 59.426 57.895 0.00 0.00 0.00 4.85
1508 1806 2.203640 AGCAGACGGGACACAGGA 60.204 61.111 0.00 0.00 0.00 3.86
1509 1807 2.047844 CAGCAGACGGGACACAGG 60.048 66.667 0.00 0.00 0.00 4.00
1510 1808 2.047844 CCAGCAGACGGGACACAG 60.048 66.667 0.00 0.00 31.88 3.66
1518 1816 3.726517 CAAACCGCCCAGCAGACG 61.727 66.667 0.00 0.00 0.00 4.18
1519 1817 3.365265 CCAAACCGCCCAGCAGAC 61.365 66.667 0.00 0.00 0.00 3.51
1520 1818 3.565214 TCCAAACCGCCCAGCAGA 61.565 61.111 0.00 0.00 0.00 4.26
1521 1819 3.365265 GTCCAAACCGCCCAGCAG 61.365 66.667 0.00 0.00 0.00 4.24
1522 1820 3.723097 TTGTCCAAACCGCCCAGCA 62.723 57.895 0.00 0.00 0.00 4.41
1523 1821 2.909965 TTGTCCAAACCGCCCAGC 60.910 61.111 0.00 0.00 0.00 4.85
1524 1822 1.388065 TTGTTGTCCAAACCGCCCAG 61.388 55.000 0.00 0.00 0.00 4.45
1525 1823 0.757188 ATTGTTGTCCAAACCGCCCA 60.757 50.000 0.00 0.00 36.44 5.36
1526 1824 0.038618 GATTGTTGTCCAAACCGCCC 60.039 55.000 0.00 0.00 36.44 6.13
1527 1825 0.386731 CGATTGTTGTCCAAACCGCC 60.387 55.000 0.00 0.00 36.44 6.13
1528 1826 1.001745 GCGATTGTTGTCCAAACCGC 61.002 55.000 8.58 8.58 36.44 5.68
1529 1827 0.724453 CGCGATTGTTGTCCAAACCG 60.724 55.000 0.00 0.00 36.44 4.44
1530 1828 1.001745 GCGCGATTGTTGTCCAAACC 61.002 55.000 12.10 0.00 36.44 3.27
1531 1829 0.317436 TGCGCGATTGTTGTCCAAAC 60.317 50.000 12.10 0.00 36.44 2.93
1532 1830 0.595588 ATGCGCGATTGTTGTCCAAA 59.404 45.000 12.10 0.00 36.44 3.28
1533 1831 0.109827 CATGCGCGATTGTTGTCCAA 60.110 50.000 12.10 0.00 37.49 3.53
1534 1832 1.501292 CATGCGCGATTGTTGTCCA 59.499 52.632 12.10 0.00 0.00 4.02
1535 1833 1.869132 GCATGCGCGATTGTTGTCC 60.869 57.895 12.10 0.00 0.00 4.02
1536 1834 1.129879 CAGCATGCGCGATTGTTGTC 61.130 55.000 12.10 0.00 45.49 3.18
1537 1835 1.154169 CAGCATGCGCGATTGTTGT 60.154 52.632 12.10 0.00 45.49 3.32
1538 1836 3.670472 CAGCATGCGCGATTGTTG 58.330 55.556 12.10 10.85 45.49 3.33
1549 1847 2.202518 CGGCCGAAAAGCAGCATG 60.203 61.111 24.07 0.00 40.87 4.06
1550 1848 3.443045 CCGGCCGAAAAGCAGCAT 61.443 61.111 30.73 0.00 0.00 3.79
1551 1849 4.947147 ACCGGCCGAAAAGCAGCA 62.947 61.111 30.73 0.00 0.00 4.41
1552 1850 3.207547 AAACCGGCCGAAAAGCAGC 62.208 57.895 30.73 0.00 0.00 5.25
1564 1862 0.179174 GGCTAAACGCATCAAACCGG 60.179 55.000 0.00 0.00 41.67 5.28
1585 1883 1.009078 CAAATCGGAGCTCGCATTCA 58.991 50.000 7.83 0.00 39.05 2.57
1611 1909 2.351418 TCTCGATAAAACGCTTGCCATG 59.649 45.455 0.00 0.00 0.00 3.66
1617 1915 7.360575 ACTACAAATTCTCGATAAAACGCTT 57.639 32.000 0.00 0.00 0.00 4.68
1625 1923 9.894783 GCTTGATAGTACTACAAATTCTCGATA 57.105 33.333 4.31 0.00 0.00 2.92
1675 1977 8.832735 ACCATGTTTCCTTTCCTAGACTATTTA 58.167 33.333 0.00 0.00 0.00 1.40
1827 2129 4.161333 GCTGAGACCATTCGAAAAATGTG 58.839 43.478 0.00 0.00 0.00 3.21
1909 2211 3.127203 CCTTCTATCTATCGGGTACTGCG 59.873 52.174 0.00 0.00 32.53 5.18
2055 2394 4.773149 GGTAGGATGTGATTACTAGGAGGG 59.227 50.000 0.00 0.00 0.00 4.30
2057 2396 5.646215 AGGGTAGGATGTGATTACTAGGAG 58.354 45.833 0.00 0.00 0.00 3.69
2058 2397 5.459241 GGAGGGTAGGATGTGATTACTAGGA 60.459 48.000 0.00 0.00 0.00 2.94
2061 2400 5.412617 TGGAGGGTAGGATGTGATTACTA 57.587 43.478 0.00 0.00 0.00 1.82
2062 2401 4.280789 TGGAGGGTAGGATGTGATTACT 57.719 45.455 0.00 0.00 0.00 2.24
2063 2402 5.104485 ACTTTGGAGGGTAGGATGTGATTAC 60.104 44.000 0.00 0.00 0.00 1.89
2109 2450 6.144080 CCGGAAAATATCTCGTAATGACTGTC 59.856 42.308 0.00 0.00 0.00 3.51
2110 2451 5.983720 CCGGAAAATATCTCGTAATGACTGT 59.016 40.000 0.00 0.00 0.00 3.55
2176 2517 4.666512 ACTAATTGCAGAGAAATGGGTGT 58.333 39.130 0.00 0.00 0.00 4.16
2226 2569 1.000163 CATGCGGGCTGGTACTACTAG 60.000 57.143 0.00 0.00 0.00 2.57
2229 2572 1.227556 CCATGCGGGCTGGTACTAC 60.228 63.158 0.00 0.00 0.00 2.73
2249 2592 4.552365 AGCATGGTCCCCATCGCG 62.552 66.667 0.00 0.00 43.15 5.87
2341 2685 4.962836 CTCCATGCCCCCATCCGC 62.963 72.222 0.00 0.00 0.00 5.54
2405 2749 1.609555 GGACATGCTCCTACTAGACGG 59.390 57.143 0.00 0.00 35.89 4.79
2449 2794 3.139850 ACGGTATGTCTAGACCTCGATG 58.860 50.000 20.11 8.25 36.01 3.84
2493 2838 2.418628 CCAGTAACATGCCAAACCGTAG 59.581 50.000 0.00 0.00 0.00 3.51
2596 2958 0.393537 GAGGAGCACAATGGAGGGTG 60.394 60.000 0.00 0.00 38.05 4.61
2599 2961 1.681166 CCTTGAGGAGCACAATGGAGG 60.681 57.143 0.00 0.00 37.39 4.30
2670 3039 8.049117 TCTGTAAAATACTCCATTGCATCTCTT 58.951 33.333 0.00 0.00 0.00 2.85
2693 3062 0.392998 CCTGTCCCCCAAATCGTCTG 60.393 60.000 0.00 0.00 0.00 3.51
2748 3117 0.725784 CGGCAGCAGTAAACAAAGCG 60.726 55.000 0.00 0.00 0.00 4.68
2784 3153 0.957395 CCATCAAACGCTCCAGCAGT 60.957 55.000 0.00 0.00 42.21 4.40
2785 3154 0.957395 ACCATCAAACGCTCCAGCAG 60.957 55.000 0.00 0.00 42.21 4.24
2787 3156 1.503542 CACCATCAAACGCTCCAGC 59.496 57.895 0.00 0.00 37.78 4.85
2788 3157 0.957395 AGCACCATCAAACGCTCCAG 60.957 55.000 0.00 0.00 0.00 3.86
2790 3159 1.796796 GAGCACCATCAAACGCTCC 59.203 57.895 0.00 0.00 44.06 4.70
2812 3196 3.251729 ACACAACTTGATTAGCAGCACTG 59.748 43.478 0.00 0.00 0.00 3.66
2983 3374 1.204704 TGAGGATTACTGGAGTGTGCG 59.795 52.381 0.00 0.00 0.00 5.34
2992 3383 6.261826 GGATCCAACAAATCTGAGGATTACTG 59.738 42.308 6.95 0.00 40.86 2.74
3136 3528 1.274728 GGATCATGGATCTCGGAGGTG 59.725 57.143 4.96 0.00 38.91 4.00
3137 3529 1.133041 TGGATCATGGATCTCGGAGGT 60.133 52.381 4.96 0.00 38.91 3.85
3138 3530 1.637338 TGGATCATGGATCTCGGAGG 58.363 55.000 4.96 0.00 38.91 4.30
3139 3531 3.098377 AGATGGATCATGGATCTCGGAG 58.902 50.000 0.00 0.00 38.91 4.63
3140 3532 3.181393 AGATGGATCATGGATCTCGGA 57.819 47.619 6.22 0.00 38.91 4.55
3142 3534 3.441922 ACGTAGATGGATCATGGATCTCG 59.558 47.826 6.22 4.86 38.91 4.04
3215 3635 2.091720 TGCCAGTCCCATTCAATAGCAT 60.092 45.455 0.00 0.00 0.00 3.79
3219 3639 1.215173 CCCTGCCAGTCCCATTCAATA 59.785 52.381 0.00 0.00 0.00 1.90
3311 3742 2.673368 CCTGCGAGGCAAAAACTACTAG 59.327 50.000 0.00 0.00 38.41 2.57
3312 3743 2.695359 CCTGCGAGGCAAAAACTACTA 58.305 47.619 0.00 0.00 38.41 1.82
3364 3795 1.530771 CTTGGCAGAGATCAGGGGG 59.469 63.158 0.00 0.00 0.00 5.40
3404 3835 2.300967 GGCCATGGGACTCCTGTCA 61.301 63.158 15.13 0.00 44.61 3.58
3588 4020 3.786161 GCTTCACGCTTAAAAACACACGA 60.786 43.478 0.00 0.00 35.14 4.35
3589 4021 2.462565 GCTTCACGCTTAAAAACACACG 59.537 45.455 0.00 0.00 35.14 4.49
3638 4070 2.278857 CCGGTTGAGCTCGATCGG 60.279 66.667 35.28 35.28 46.41 4.18
3739 4176 1.097547 GGATCATGTGGTTCCGCTGG 61.098 60.000 4.05 0.00 0.00 4.85
3791 4228 1.591158 CGGTTTGGACGTATTGGATCG 59.409 52.381 0.00 0.00 0.00 3.69
3892 4329 1.896465 AGGATCGCCTACTTCCATAGC 59.104 52.381 0.00 0.00 44.74 2.97
3895 4332 2.630580 GAGAAGGATCGCCTACTTCCAT 59.369 50.000 6.26 0.00 46.28 3.41
3896 4333 2.032620 GAGAAGGATCGCCTACTTCCA 58.967 52.381 6.26 0.00 46.28 3.53
4003 4443 1.595109 TGCGATCGGGCATGTGATC 60.595 57.895 18.30 12.11 38.17 2.92
4076 4520 1.085091 CGTATCGATACCTCCTCCGG 58.915 60.000 25.89 8.80 0.00 5.14
4077 4521 1.085091 CCGTATCGATACCTCCTCCG 58.915 60.000 25.89 14.40 0.00 4.63
4091 4535 1.307097 GTGAGCTCTCCGTACCGTAT 58.693 55.000 16.19 0.00 0.00 3.06
4187 5482 2.288948 GCTAGCCATGAGTGATGAGAGG 60.289 54.545 2.29 0.00 33.31 3.69
4188 5483 2.288948 GGCTAGCCATGAGTGATGAGAG 60.289 54.545 29.33 0.00 33.31 3.20
4189 5484 1.690893 GGCTAGCCATGAGTGATGAGA 59.309 52.381 29.33 0.00 33.31 3.27
4288 5596 2.510691 GCCACCACCGGATACACG 60.511 66.667 9.46 0.00 0.00 4.49
4428 5742 3.146847 CAACCTCAAGGAAACCTACACC 58.853 50.000 2.30 0.00 38.94 4.16
4472 5786 3.650942 TCCAGTTTAACCATCCACTCACT 59.349 43.478 0.00 0.00 0.00 3.41
4543 5865 2.244000 ACGGTTCCGTTCAGCAATG 58.756 52.632 11.27 0.00 39.88 2.82
4589 5911 9.997482 GTGTTTTTCATTTCACTTTCTACTACA 57.003 29.630 0.00 0.00 0.00 2.74
4600 5923 4.865776 TCCCATCGTGTTTTTCATTTCAC 58.134 39.130 0.00 0.00 0.00 3.18
4650 5973 0.455633 CGCATTTGCTCTGGTCAAGC 60.456 55.000 0.51 0.00 40.26 4.01
4724 6050 2.431260 GCCCAACGTTGCTGCATG 60.431 61.111 26.39 12.77 0.00 4.06
4734 6060 1.669115 CCTCTGTGTCAGCCCAACG 60.669 63.158 0.00 0.00 0.00 4.10
4739 6065 2.419297 CCTCATTACCTCTGTGTCAGCC 60.419 54.545 0.00 0.00 0.00 4.85
4791 6119 4.070552 GGCGTCGCTCTCCACCTT 62.071 66.667 18.11 0.00 0.00 3.50
4793 6121 4.148825 ATGGCGTCGCTCTCCACC 62.149 66.667 18.11 0.00 33.45 4.61
4794 6122 2.583593 GATGGCGTCGCTCTCCAC 60.584 66.667 18.11 0.00 33.45 4.02
4795 6123 3.068064 TGATGGCGTCGCTCTCCA 61.068 61.111 18.11 6.78 35.25 3.86
4799 6127 2.887568 CAGGTGATGGCGTCGCTC 60.888 66.667 18.11 8.39 37.50 5.03
4805 6133 0.813184 AAATTCTGCAGGTGATGGCG 59.187 50.000 15.13 0.00 0.00 5.69
4832 6160 2.393646 CCTCCTACTGGAAGAGGGAAG 58.606 57.143 0.00 0.00 42.98 3.46
4853 6181 1.661463 ATGCAGGAGAACAGAAGGGA 58.339 50.000 0.00 0.00 0.00 4.20
4982 6312 2.716988 GCAAATGTCGCTGTTGCTC 58.283 52.632 0.53 0.00 43.40 4.26
5066 6397 2.074547 AGATGGTCCAACAACGTACG 57.925 50.000 15.01 15.01 0.00 3.67
5087 6418 2.416547 CACTGCACGGAAGGTAAAGATG 59.583 50.000 0.00 0.00 0.00 2.90
5176 6511 4.200838 TCATGGATCGAGCTGTGTAAAA 57.799 40.909 0.00 0.00 0.00 1.52
5183 6518 5.998454 AATTAAGTTCATGGATCGAGCTG 57.002 39.130 0.00 0.00 0.00 4.24
5209 6544 5.583061 TGCAACAACTACTAATAATCACGGG 59.417 40.000 0.00 0.00 0.00 5.28
5526 6863 3.120385 TCGACGAAGCCGCGAGTA 61.120 61.111 8.23 0.00 38.58 2.59
5589 6926 6.884836 GGTAAAAGCCCAGAAGATAGAAGAAA 59.115 38.462 0.00 0.00 0.00 2.52
5595 6932 3.879892 GCAGGTAAAAGCCCAGAAGATAG 59.120 47.826 0.00 0.00 0.00 2.08
5597 6934 2.728007 GCAGGTAAAAGCCCAGAAGAT 58.272 47.619 0.00 0.00 0.00 2.40
5641 6999 3.660970 TTGCCAGAAGCCCATGTAATA 57.339 42.857 0.00 0.00 42.71 0.98
5679 7037 1.288932 AGTTGAAGCCCAAGCCCATAT 59.711 47.619 0.00 0.00 41.25 1.78
5703 7061 0.038526 CCCTACGACAACACTTCGCT 60.039 55.000 0.00 0.00 40.24 4.93
5708 7066 0.603569 CTGAGCCCTACGACAACACT 59.396 55.000 0.00 0.00 0.00 3.55
5709 7067 0.389948 CCTGAGCCCTACGACAACAC 60.390 60.000 0.00 0.00 0.00 3.32
5710 7068 1.541310 CCCTGAGCCCTACGACAACA 61.541 60.000 0.00 0.00 0.00 3.33
5711 7069 1.218316 CCCTGAGCCCTACGACAAC 59.782 63.158 0.00 0.00 0.00 3.32
5712 7070 2.656069 GCCCTGAGCCCTACGACAA 61.656 63.158 0.00 0.00 34.35 3.18
5713 7071 3.075005 GCCCTGAGCCCTACGACA 61.075 66.667 0.00 0.00 34.35 4.35
5714 7072 2.760385 AGCCCTGAGCCCTACGAC 60.760 66.667 0.00 0.00 45.47 4.34
5716 7074 3.854669 CCAGCCCTGAGCCCTACG 61.855 72.222 0.00 0.00 45.47 3.51
5717 7075 3.483869 CCCAGCCCTGAGCCCTAC 61.484 72.222 0.00 0.00 45.47 3.18
5763 7135 3.075005 ACTACGACGCCCCATGCT 61.075 61.111 0.00 0.00 38.05 3.79
5770 7142 1.202234 GGGACTAAAGACTACGACGCC 60.202 57.143 0.00 0.00 0.00 5.68
5799 7171 3.387050 ACCGGTCACAGTTTCTCTAAAGT 59.613 43.478 0.00 0.00 0.00 2.66
5848 7220 3.068590 TCTCTCCTTTTTACGAACACGGT 59.931 43.478 0.00 0.00 0.00 4.83
5850 7222 3.119136 CGTCTCTCCTTTTTACGAACACG 59.881 47.826 0.00 0.00 35.66 4.49
5893 7265 0.179029 AACCGCAGTGTGCTAGGTTT 60.179 50.000 0.00 0.00 42.25 3.27
5894 7266 0.682852 TAACCGCAGTGTGCTAGGTT 59.317 50.000 13.50 13.50 42.25 3.50
5991 7408 8.482128 TCATGGGTAGAAAACTTTGAAAAACAT 58.518 29.630 0.00 0.00 0.00 2.71
5996 7413 9.898152 AAAAATCATGGGTAGAAAACTTTGAAA 57.102 25.926 0.00 0.00 0.00 2.69
6043 7511 9.773328 CGAGAGAATCAGATGATATTAGAGAAC 57.227 37.037 0.00 0.00 37.82 3.01
6046 7514 9.558648 CAACGAGAGAATCAGATGATATTAGAG 57.441 37.037 0.00 0.00 37.82 2.43
6223 7708 4.494855 GCGAAAAGAGATTGTGGATGTAGC 60.495 45.833 0.00 0.00 0.00 3.58
6224 7709 4.872691 AGCGAAAAGAGATTGTGGATGTAG 59.127 41.667 0.00 0.00 0.00 2.74
6233 7718 2.150797 GCGACAGCGAAAAGAGATTG 57.849 50.000 0.00 0.00 40.82 2.67
6247 7733 2.357323 TCAAAACTCAAATGCAGCGACA 59.643 40.909 0.00 0.00 0.00 4.35
6248 7734 2.721090 GTCAAAACTCAAATGCAGCGAC 59.279 45.455 0.00 0.00 0.00 5.19
6252 7738 4.044336 TGGTGTCAAAACTCAAATGCAG 57.956 40.909 0.00 0.00 0.00 4.41
6253 7739 4.669206 ATGGTGTCAAAACTCAAATGCA 57.331 36.364 0.00 0.00 0.00 3.96
6262 7748 1.408422 GCGCAGAATGGTGTCAAAAC 58.592 50.000 0.30 0.00 35.86 2.43
6276 7762 2.507992 CCTGGAGAAGACGCGCAG 60.508 66.667 5.73 2.94 0.00 5.18
6278 7764 4.443266 AGCCTGGAGAAGACGCGC 62.443 66.667 5.73 0.00 0.00 6.86
6279 7765 2.507992 CAGCCTGGAGAAGACGCG 60.508 66.667 3.53 3.53 0.00 6.01
6280 7766 2.125350 CCAGCCTGGAGAAGACGC 60.125 66.667 4.15 0.00 40.96 5.19
6281 7767 1.079543 CACCAGCCTGGAGAAGACG 60.080 63.158 19.90 0.00 40.96 4.18
6282 7768 0.321122 CACACCAGCCTGGAGAAGAC 60.321 60.000 19.90 0.00 40.96 3.01
6565 8052 2.125106 ACGGGAGCTTCGCATTCC 60.125 61.111 9.79 0.00 0.00 3.01
6823 8310 3.605749 CTTCCAGCCGCCCGAAGAA 62.606 63.158 10.27 0.00 35.99 2.52
6883 8370 1.903877 CGCTGGACAGAGGGATGGTT 61.904 60.000 3.00 0.00 0.00 3.67
7177 8664 1.807573 CTTCTCCAGCGCGAACTCC 60.808 63.158 12.10 0.00 0.00 3.85
7180 8667 2.815647 CCCTTCTCCAGCGCGAAC 60.816 66.667 12.10 0.00 0.00 3.95
7281 8768 0.731514 CGGCATGTTGACGTCGTAGT 60.732 55.000 11.62 0.00 45.41 2.73
7351 8838 3.616721 AGGAGCTCGCACACGGTT 61.617 61.111 7.83 0.00 40.63 4.44
7352 8839 4.363990 CAGGAGCTCGCACACGGT 62.364 66.667 7.83 0.00 40.63 4.83
7521 9008 2.430080 CTTGGTGTGCTTGACGACGC 62.430 60.000 0.00 0.00 0.00 5.19
7528 9015 3.673484 CCGCCCTTGGTGTGCTTG 61.673 66.667 0.00 0.00 0.00 4.01
7825 9312 3.599285 CTTGCCGAACACCGCCCTA 62.599 63.158 0.00 0.00 36.84 3.53
7978 9477 2.124819 CGAGCAGAAGGCCAGCAT 60.125 61.111 5.01 0.00 46.50 3.79
8204 9711 2.356135 TCTGCTAAGAAACGGCATTCC 58.644 47.619 0.00 0.00 35.37 3.01
8223 9730 8.229137 GCATAATCTTGAGCAATAGATCACTTC 58.771 37.037 0.00 0.00 40.39 3.01
8237 9744 3.388308 CTCCAGGTCGCATAATCTTGAG 58.612 50.000 0.00 0.00 0.00 3.02
8251 9758 0.246635 CGTGTCGATTTCCTCCAGGT 59.753 55.000 0.00 0.00 36.34 4.00
8252 9759 0.530744 TCGTGTCGATTTCCTCCAGG 59.469 55.000 0.00 0.00 0.00 4.45
8253 9760 1.202582 AGTCGTGTCGATTTCCTCCAG 59.797 52.381 0.00 0.00 38.42 3.86
8254 9761 1.254026 AGTCGTGTCGATTTCCTCCA 58.746 50.000 0.00 0.00 38.42 3.86
8256 9763 4.669318 TCATAAGTCGTGTCGATTTCCTC 58.331 43.478 3.48 0.00 37.10 3.71
8257 9764 4.713824 TCATAAGTCGTGTCGATTTCCT 57.286 40.909 3.48 0.00 37.10 3.36
8258 9765 7.169308 ACATTATCATAAGTCGTGTCGATTTCC 59.831 37.037 3.48 0.00 37.10 3.13
8259 9766 8.062231 ACATTATCATAAGTCGTGTCGATTTC 57.938 34.615 3.48 0.00 37.10 2.17
8261 9768 9.524106 TTTACATTATCATAAGTCGTGTCGATT 57.476 29.630 0.00 0.00 38.42 3.34
8262 9769 9.524106 TTTTACATTATCATAAGTCGTGTCGAT 57.476 29.630 0.00 0.00 38.42 3.59
8263 9770 8.914328 TTTTACATTATCATAAGTCGTGTCGA 57.086 30.769 0.00 0.00 0.00 4.20
8298 9805 8.413229 CCCGTCTCAAAATATATTCCAAAATGT 58.587 33.333 0.00 0.00 0.00 2.71
8299 9806 8.629158 TCCCGTCTCAAAATATATTCCAAAATG 58.371 33.333 0.00 0.00 0.00 2.32
8300 9807 8.760980 TCCCGTCTCAAAATATATTCCAAAAT 57.239 30.769 0.00 0.00 0.00 1.82
8301 9808 7.832187 ACTCCCGTCTCAAAATATATTCCAAAA 59.168 33.333 0.00 0.00 0.00 2.44
8302 9809 7.343357 ACTCCCGTCTCAAAATATATTCCAAA 58.657 34.615 0.00 0.00 0.00 3.28
8303 9810 6.895782 ACTCCCGTCTCAAAATATATTCCAA 58.104 36.000 0.00 0.00 0.00 3.53
8304 9811 6.494666 ACTCCCGTCTCAAAATATATTCCA 57.505 37.500 0.00 0.00 0.00 3.53
8305 9812 7.668492 ACTACTCCCGTCTCAAAATATATTCC 58.332 38.462 0.00 0.00 0.00 3.01
8306 9813 8.979574 CAACTACTCCCGTCTCAAAATATATTC 58.020 37.037 0.00 0.00 0.00 1.75
8307 9814 8.483758 ACAACTACTCCCGTCTCAAAATATATT 58.516 33.333 0.00 0.00 0.00 1.28
8308 9815 7.926555 CACAACTACTCCCGTCTCAAAATATAT 59.073 37.037 0.00 0.00 0.00 0.86
8309 9816 7.262772 CACAACTACTCCCGTCTCAAAATATA 58.737 38.462 0.00 0.00 0.00 0.86
8310 9817 6.106673 CACAACTACTCCCGTCTCAAAATAT 58.893 40.000 0.00 0.00 0.00 1.28
8311 9818 5.475719 CACAACTACTCCCGTCTCAAAATA 58.524 41.667 0.00 0.00 0.00 1.40
8312 9819 4.315803 CACAACTACTCCCGTCTCAAAAT 58.684 43.478 0.00 0.00 0.00 1.82
8313 9820 3.493699 CCACAACTACTCCCGTCTCAAAA 60.494 47.826 0.00 0.00 0.00 2.44
8314 9821 2.036733 CCACAACTACTCCCGTCTCAAA 59.963 50.000 0.00 0.00 0.00 2.69
8315 9822 1.616865 CCACAACTACTCCCGTCTCAA 59.383 52.381 0.00 0.00 0.00 3.02
8316 9823 1.254026 CCACAACTACTCCCGTCTCA 58.746 55.000 0.00 0.00 0.00 3.27
8317 9824 1.254954 ACCACAACTACTCCCGTCTC 58.745 55.000 0.00 0.00 0.00 3.36
8318 9825 1.343465 CAACCACAACTACTCCCGTCT 59.657 52.381 0.00 0.00 0.00 4.18
8319 9826 1.607251 CCAACCACAACTACTCCCGTC 60.607 57.143 0.00 0.00 0.00 4.79
8320 9827 0.395312 CCAACCACAACTACTCCCGT 59.605 55.000 0.00 0.00 0.00 5.28
8321 9828 0.682852 TCCAACCACAACTACTCCCG 59.317 55.000 0.00 0.00 0.00 5.14
8322 9829 2.943036 TTCCAACCACAACTACTCCC 57.057 50.000 0.00 0.00 0.00 4.30
8323 9830 4.457466 TCTTTTCCAACCACAACTACTCC 58.543 43.478 0.00 0.00 0.00 3.85
8324 9831 4.515567 CCTCTTTTCCAACCACAACTACTC 59.484 45.833 0.00 0.00 0.00 2.59
8325 9832 4.079958 ACCTCTTTTCCAACCACAACTACT 60.080 41.667 0.00 0.00 0.00 2.57
8326 9833 4.204799 ACCTCTTTTCCAACCACAACTAC 58.795 43.478 0.00 0.00 0.00 2.73
8327 9834 4.080243 TGACCTCTTTTCCAACCACAACTA 60.080 41.667 0.00 0.00 0.00 2.24
8328 9835 3.288092 GACCTCTTTTCCAACCACAACT 58.712 45.455 0.00 0.00 0.00 3.16
8329 9836 3.020984 TGACCTCTTTTCCAACCACAAC 58.979 45.455 0.00 0.00 0.00 3.32
8330 9837 3.374042 TGACCTCTTTTCCAACCACAA 57.626 42.857 0.00 0.00 0.00 3.33
8331 9838 3.374042 TTGACCTCTTTTCCAACCACA 57.626 42.857 0.00 0.00 0.00 4.17
8332 9839 3.636764 ACATTGACCTCTTTTCCAACCAC 59.363 43.478 0.00 0.00 0.00 4.16
8333 9840 3.909732 ACATTGACCTCTTTTCCAACCA 58.090 40.909 0.00 0.00 0.00 3.67
8334 9841 4.501400 CCAACATTGACCTCTTTTCCAACC 60.501 45.833 0.00 0.00 0.00 3.77
8335 9842 4.620982 CCAACATTGACCTCTTTTCCAAC 58.379 43.478 0.00 0.00 0.00 3.77
8336 9843 3.069443 GCCAACATTGACCTCTTTTCCAA 59.931 43.478 0.00 0.00 0.00 3.53
8337 9844 2.627699 GCCAACATTGACCTCTTTTCCA 59.372 45.455 0.00 0.00 0.00 3.53
8338 9845 2.893489 AGCCAACATTGACCTCTTTTCC 59.107 45.455 0.00 0.00 0.00 3.13
8339 9846 3.057245 GGAGCCAACATTGACCTCTTTTC 60.057 47.826 10.20 0.00 31.48 2.29
8340 9847 2.893489 GGAGCCAACATTGACCTCTTTT 59.107 45.455 10.20 0.00 31.48 2.27
8341 9848 2.158475 TGGAGCCAACATTGACCTCTTT 60.158 45.455 10.20 0.00 31.48 2.52
8342 9849 1.425066 TGGAGCCAACATTGACCTCTT 59.575 47.619 10.20 0.00 31.48 2.85
8343 9850 1.004044 CTGGAGCCAACATTGACCTCT 59.996 52.381 10.20 0.00 31.48 3.69
8344 9851 1.457346 CTGGAGCCAACATTGACCTC 58.543 55.000 0.00 0.00 0.00 3.85
8345 9852 0.038744 CCTGGAGCCAACATTGACCT 59.961 55.000 0.00 0.00 0.00 3.85
8346 9853 0.251341 ACCTGGAGCCAACATTGACC 60.251 55.000 0.00 0.00 0.00 4.02
8347 9854 1.168714 GACCTGGAGCCAACATTGAC 58.831 55.000 0.00 0.00 0.00 3.18
8348 9855 0.321564 CGACCTGGAGCCAACATTGA 60.322 55.000 0.00 0.00 0.00 2.57
8349 9856 0.321564 TCGACCTGGAGCCAACATTG 60.322 55.000 0.00 0.00 0.00 2.82
8350 9857 0.400213 TTCGACCTGGAGCCAACATT 59.600 50.000 0.00 0.00 0.00 2.71
8351 9858 0.036010 CTTCGACCTGGAGCCAACAT 60.036 55.000 0.00 0.00 0.00 2.71
8352 9859 1.118965 TCTTCGACCTGGAGCCAACA 61.119 55.000 0.00 0.00 0.00 3.33
8353 9860 0.034896 TTCTTCGACCTGGAGCCAAC 59.965 55.000 0.00 0.00 0.00 3.77
8354 9861 0.984230 ATTCTTCGACCTGGAGCCAA 59.016 50.000 0.00 0.00 0.00 4.52
8355 9862 0.984230 AATTCTTCGACCTGGAGCCA 59.016 50.000 0.00 0.00 0.00 4.75
8356 9863 1.066143 TCAATTCTTCGACCTGGAGCC 60.066 52.381 0.00 0.00 0.00 4.70
8357 9864 2.003301 GTCAATTCTTCGACCTGGAGC 58.997 52.381 0.00 0.00 0.00 4.70
8358 9865 2.622436 GGTCAATTCTTCGACCTGGAG 58.378 52.381 0.00 0.00 46.83 3.86
8359 9866 2.762535 GGTCAATTCTTCGACCTGGA 57.237 50.000 0.00 0.00 46.83 3.86
8364 9871 5.179368 TGATGAACTTGGTCAATTCTTCGAC 59.821 40.000 0.00 0.00 32.14 4.20
8365 9872 5.304778 TGATGAACTTGGTCAATTCTTCGA 58.695 37.500 0.00 0.00 32.14 3.71
8366 9873 5.611796 TGATGAACTTGGTCAATTCTTCG 57.388 39.130 0.00 0.00 32.14 3.79
8367 9874 6.974965 ACTTGATGAACTTGGTCAATTCTTC 58.025 36.000 0.00 0.00 32.05 2.87
8368 9875 6.293626 CGACTTGATGAACTTGGTCAATTCTT 60.294 38.462 0.00 0.00 32.57 2.52
8369 9876 5.180117 CGACTTGATGAACTTGGTCAATTCT 59.820 40.000 0.00 0.00 32.57 2.40
8370 9877 5.179368 TCGACTTGATGAACTTGGTCAATTC 59.821 40.000 0.00 0.00 32.05 2.17
8371 9878 5.063204 TCGACTTGATGAACTTGGTCAATT 58.937 37.500 0.00 0.00 32.05 2.32
8372 9879 4.641396 TCGACTTGATGAACTTGGTCAAT 58.359 39.130 0.00 0.00 32.05 2.57
8373 9880 4.058124 CTCGACTTGATGAACTTGGTCAA 58.942 43.478 0.00 0.00 0.00 3.18
8374 9881 3.320826 TCTCGACTTGATGAACTTGGTCA 59.679 43.478 0.00 0.00 0.00 4.02
8375 9882 3.914312 TCTCGACTTGATGAACTTGGTC 58.086 45.455 0.00 0.00 0.00 4.02
8376 9883 4.336889 TTCTCGACTTGATGAACTTGGT 57.663 40.909 0.00 0.00 0.00 3.67
8377 9884 4.153117 CCTTTCTCGACTTGATGAACTTGG 59.847 45.833 0.00 0.00 0.00 3.61
8378 9885 4.153117 CCCTTTCTCGACTTGATGAACTTG 59.847 45.833 0.00 0.00 0.00 3.16
8379 9886 4.319177 CCCTTTCTCGACTTGATGAACTT 58.681 43.478 0.00 0.00 0.00 2.66
8380 9887 3.866449 GCCCTTTCTCGACTTGATGAACT 60.866 47.826 0.00 0.00 0.00 3.01
8381 9888 2.416893 GCCCTTTCTCGACTTGATGAAC 59.583 50.000 0.00 0.00 0.00 3.18
8382 9889 2.303022 AGCCCTTTCTCGACTTGATGAA 59.697 45.455 0.00 0.00 0.00 2.57
8383 9890 1.902508 AGCCCTTTCTCGACTTGATGA 59.097 47.619 0.00 0.00 0.00 2.92
8384 9891 2.393271 AGCCCTTTCTCGACTTGATG 57.607 50.000 0.00 0.00 0.00 3.07
8385 9892 2.432510 CCTAGCCCTTTCTCGACTTGAT 59.567 50.000 0.00 0.00 0.00 2.57
8386 9893 1.825474 CCTAGCCCTTTCTCGACTTGA 59.175 52.381 0.00 0.00 0.00 3.02
8387 9894 1.825474 TCCTAGCCCTTTCTCGACTTG 59.175 52.381 0.00 0.00 0.00 3.16
8388 9895 2.233305 TCCTAGCCCTTTCTCGACTT 57.767 50.000 0.00 0.00 0.00 3.01
8389 9896 2.233305 TTCCTAGCCCTTTCTCGACT 57.767 50.000 0.00 0.00 0.00 4.18
8390 9897 2.418884 CCTTTCCTAGCCCTTTCTCGAC 60.419 54.545 0.00 0.00 0.00 4.20
8391 9898 1.831736 CCTTTCCTAGCCCTTTCTCGA 59.168 52.381 0.00 0.00 0.00 4.04
8392 9899 1.134371 CCCTTTCCTAGCCCTTTCTCG 60.134 57.143 0.00 0.00 0.00 4.04
8393 9900 1.916874 ACCCTTTCCTAGCCCTTTCTC 59.083 52.381 0.00 0.00 0.00 2.87
8394 9901 2.061264 ACCCTTTCCTAGCCCTTTCT 57.939 50.000 0.00 0.00 0.00 2.52
8395 9902 2.901338 AACCCTTTCCTAGCCCTTTC 57.099 50.000 0.00 0.00 0.00 2.62
8396 9903 4.752621 TTAAACCCTTTCCTAGCCCTTT 57.247 40.909 0.00 0.00 0.00 3.11
8397 9904 4.752621 TTTAAACCCTTTCCTAGCCCTT 57.247 40.909 0.00 0.00 0.00 3.95
8398 9905 4.293901 TCATTTAAACCCTTTCCTAGCCCT 59.706 41.667 0.00 0.00 0.00 5.19
8399 9906 4.606210 TCATTTAAACCCTTTCCTAGCCC 58.394 43.478 0.00 0.00 0.00 5.19
8400 9907 6.129874 AGATCATTTAAACCCTTTCCTAGCC 58.870 40.000 0.00 0.00 0.00 3.93
8401 9908 7.646548 AAGATCATTTAAACCCTTTCCTAGC 57.353 36.000 0.00 0.00 0.00 3.42
8422 9929 9.146586 CCTCCATCCCAAAATCAAAATATAAGA 57.853 33.333 0.00 0.00 0.00 2.10
8423 9930 8.370182 CCCTCCATCCCAAAATCAAAATATAAG 58.630 37.037 0.00 0.00 0.00 1.73
8424 9931 8.070604 TCCCTCCATCCCAAAATCAAAATATAA 58.929 33.333 0.00 0.00 0.00 0.98
8425 9932 7.600093 TCCCTCCATCCCAAAATCAAAATATA 58.400 34.615 0.00 0.00 0.00 0.86
8426 9933 6.451714 TCCCTCCATCCCAAAATCAAAATAT 58.548 36.000 0.00 0.00 0.00 1.28
8427 9934 5.848004 TCCCTCCATCCCAAAATCAAAATA 58.152 37.500 0.00 0.00 0.00 1.40
8428 9935 4.697798 TCCCTCCATCCCAAAATCAAAAT 58.302 39.130 0.00 0.00 0.00 1.82
8429 9936 4.095946 CTCCCTCCATCCCAAAATCAAAA 58.904 43.478 0.00 0.00 0.00 2.44
8430 9937 3.077391 ACTCCCTCCATCCCAAAATCAAA 59.923 43.478 0.00 0.00 0.00 2.69
8431 9938 2.654385 ACTCCCTCCATCCCAAAATCAA 59.346 45.455 0.00 0.00 0.00 2.57
8432 9939 2.287584 ACTCCCTCCATCCCAAAATCA 58.712 47.619 0.00 0.00 0.00 2.57
8433 9940 3.748989 GCTACTCCCTCCATCCCAAAATC 60.749 52.174 0.00 0.00 0.00 2.17
8434 9941 2.175715 GCTACTCCCTCCATCCCAAAAT 59.824 50.000 0.00 0.00 0.00 1.82
8435 9942 1.564348 GCTACTCCCTCCATCCCAAAA 59.436 52.381 0.00 0.00 0.00 2.44
8436 9943 1.213296 GCTACTCCCTCCATCCCAAA 58.787 55.000 0.00 0.00 0.00 3.28
8437 9944 0.044092 TGCTACTCCCTCCATCCCAA 59.956 55.000 0.00 0.00 0.00 4.12
8438 9945 0.268869 ATGCTACTCCCTCCATCCCA 59.731 55.000 0.00 0.00 0.00 4.37
8439 9946 1.439543 AATGCTACTCCCTCCATCCC 58.560 55.000 0.00 0.00 0.00 3.85
8440 9947 3.584733 AAAATGCTACTCCCTCCATCC 57.415 47.619 0.00 0.00 0.00 3.51
8441 9948 5.297569 ACTAAAATGCTACTCCCTCCATC 57.702 43.478 0.00 0.00 0.00 3.51
8442 9949 4.103311 GGACTAAAATGCTACTCCCTCCAT 59.897 45.833 0.00 0.00 0.00 3.41
8443 9950 3.454812 GGACTAAAATGCTACTCCCTCCA 59.545 47.826 0.00 0.00 0.00 3.86
8444 9951 3.454812 TGGACTAAAATGCTACTCCCTCC 59.545 47.826 0.00 0.00 0.00 4.30
8445 9952 4.443621 GTGGACTAAAATGCTACTCCCTC 58.556 47.826 0.00 0.00 0.00 4.30
8446 9953 3.118738 CGTGGACTAAAATGCTACTCCCT 60.119 47.826 0.00 0.00 0.00 4.20
8447 9954 3.118884 TCGTGGACTAAAATGCTACTCCC 60.119 47.826 0.00 0.00 0.00 4.30
8448 9955 4.119442 TCGTGGACTAAAATGCTACTCC 57.881 45.455 0.00 0.00 0.00 3.85
8449 9956 6.073440 TGTTTTCGTGGACTAAAATGCTACTC 60.073 38.462 0.00 0.00 0.00 2.59
8450 9957 5.761234 TGTTTTCGTGGACTAAAATGCTACT 59.239 36.000 0.00 0.00 0.00 2.57
8451 9958 5.992729 TGTTTTCGTGGACTAAAATGCTAC 58.007 37.500 0.00 0.00 0.00 3.58
8490 9997 8.345565 GTGATTACCCACATAATCTTGATCAAC 58.654 37.037 3.38 0.00 40.70 3.18
8508 10015 8.630917 TCTTATCTGTTACTAGCTGTGATTACC 58.369 37.037 0.00 0.00 0.00 2.85
8511 10018 8.299990 AGTCTTATCTGTTACTAGCTGTGATT 57.700 34.615 0.00 0.00 0.00 2.57
8512 10019 7.013846 GGAGTCTTATCTGTTACTAGCTGTGAT 59.986 40.741 0.00 0.00 0.00 3.06
8513 10020 6.319152 GGAGTCTTATCTGTTACTAGCTGTGA 59.681 42.308 0.00 0.00 0.00 3.58
8516 10023 5.527951 TCGGAGTCTTATCTGTTACTAGCTG 59.472 44.000 0.00 0.00 0.00 4.24
8517 10024 5.528320 GTCGGAGTCTTATCTGTTACTAGCT 59.472 44.000 0.00 0.00 0.00 3.32
8518 10025 5.296283 TGTCGGAGTCTTATCTGTTACTAGC 59.704 44.000 0.00 0.00 0.00 3.42
8519 10026 6.762187 TCTGTCGGAGTCTTATCTGTTACTAG 59.238 42.308 0.00 0.00 0.00 2.57
8520 10027 6.538021 GTCTGTCGGAGTCTTATCTGTTACTA 59.462 42.308 0.00 0.00 0.00 1.82
8521 10028 5.354792 GTCTGTCGGAGTCTTATCTGTTACT 59.645 44.000 0.00 0.00 0.00 2.24
8522 10029 5.571277 GTCTGTCGGAGTCTTATCTGTTAC 58.429 45.833 0.00 0.00 0.00 2.50
8523 10030 4.331992 CGTCTGTCGGAGTCTTATCTGTTA 59.668 45.833 0.00 0.00 35.71 2.41
8525 10032 2.678836 CGTCTGTCGGAGTCTTATCTGT 59.321 50.000 0.00 0.00 35.71 3.41
8526 10033 3.326733 CGTCTGTCGGAGTCTTATCTG 57.673 52.381 0.00 0.00 35.71 2.90
8545 10052 1.151777 CGTTGTACTATGCCTGGCCG 61.152 60.000 17.53 7.20 0.00 6.13
8560 10088 1.264288 GTTTCTCCTGTTCAGCCGTTG 59.736 52.381 0.00 0.00 0.00 4.10
8564 10092 2.206576 ATGGTTTCTCCTGTTCAGCC 57.793 50.000 0.00 0.00 37.07 4.85
8579 10107 4.865905 TGATTTAGTGTGCCCATTATGGT 58.134 39.130 10.65 0.00 35.17 3.55
8585 10113 4.832266 TGAAAACTGATTTAGTGTGCCCAT 59.168 37.500 0.00 0.00 40.26 4.00
8589 10117 7.362662 TGAGAATGAAAACTGATTTAGTGTGC 58.637 34.615 0.00 0.00 40.26 4.57
8603 10139 8.236586 CCACGAATTGATACTTGAGAATGAAAA 58.763 33.333 0.00 0.00 0.00 2.29
8629 10166 6.458342 GCAACTTTGATTATGGTGTAGGTAGC 60.458 42.308 0.00 0.00 0.00 3.58
8639 10176 5.327616 TGGTGATGCAACTTTGATTATGG 57.672 39.130 0.00 0.00 0.00 2.74
8647 10184 2.101249 CAGGTGTTGGTGATGCAACTTT 59.899 45.455 0.00 0.00 32.91 2.66
8653 10190 1.870055 CTGGCAGGTGTTGGTGATGC 61.870 60.000 6.61 0.00 36.16 3.91
8715 10252 4.022329 AGTTTTACCTTGTGGCATTGTAGC 60.022 41.667 0.00 0.00 36.63 3.58
8716 10253 5.705609 AGTTTTACCTTGTGGCATTGTAG 57.294 39.130 0.00 0.00 36.63 2.74
8717 10254 7.768807 AATAGTTTTACCTTGTGGCATTGTA 57.231 32.000 0.00 0.00 36.63 2.41
8739 10276 3.441572 GCCGCAGCCATATCAAAGATAAT 59.558 43.478 0.00 0.00 0.00 1.28
8741 10278 2.224499 TGCCGCAGCCATATCAAAGATA 60.224 45.455 0.00 0.00 38.69 1.98
8745 10282 1.383456 GGTGCCGCAGCCATATCAAA 61.383 55.000 11.63 0.00 38.69 2.69
8759 10296 1.968540 GTTGAGCCACTGAGGTGCC 60.969 63.158 0.00 0.00 41.75 5.01
8786 10323 5.403166 TCGTTTACCTTACACAACTTCGATG 59.597 40.000 0.00 0.00 0.00 3.84
8839 10376 3.910568 AGGAAATCTCTGGAAGCTGAG 57.089 47.619 0.00 0.00 0.00 3.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.