Multiple sequence alignment - TraesCS2A01G347700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G347700 chr2A 100.000 4760 0 0 1 4760 585928750 585923991 0.000000e+00 8791.0
1 TraesCS2A01G347700 chr2A 82.862 1943 300 20 917 2849 36384207 36386126 0.000000e+00 1712.0
2 TraesCS2A01G347700 chr2A 85.499 531 69 6 917 1443 36408948 36409474 9.010000e-152 547.0
3 TraesCS2A01G347700 chr2A 78.831 770 140 17 3006 3767 36386126 36386880 9.200000e-137 497.0
4 TraesCS2A01G347700 chr2A 77.671 627 132 8 2468 3090 585927210 585926588 4.500000e-100 375.0
5 TraesCS2A01G347700 chr2B 93.073 3479 202 19 571 4013 521978559 521975084 0.000000e+00 5053.0
6 TraesCS2A01G347700 chr2B 82.876 1933 305 18 924 2849 55177934 55179847 0.000000e+00 1712.0
7 TraesCS2A01G347700 chr2B 79.443 754 131 19 3006 3748 55179847 55180587 3.290000e-141 512.0
8 TraesCS2A01G347700 chr2B 79.408 743 129 13 3008 3739 55691820 55692549 1.980000e-138 503.0
9 TraesCS2A01G347700 chr2B 77.521 605 128 6 2468 3068 521977567 521976967 1.630000e-94 357.0
10 TraesCS2A01G347700 chr2B 96.429 196 7 0 4015 4210 521974873 521974678 1.650000e-84 324.0
11 TraesCS2A01G347700 chr2B 80.992 363 37 14 4351 4712 521974592 521974261 4.730000e-65 259.0
12 TraesCS2A01G347700 chr2B 98.750 80 1 0 25 104 521978807 521978728 4.970000e-30 143.0
13 TraesCS2A01G347700 chr2B 75.618 283 69 0 2772 3054 55691427 55691709 1.790000e-29 141.0
14 TraesCS2A01G347700 chr2D 94.300 2579 125 8 858 3418 442441842 442439268 0.000000e+00 3928.0
15 TraesCS2A01G347700 chr2D 84.045 1968 297 12 917 2876 33365083 33367041 0.000000e+00 1879.0
16 TraesCS2A01G347700 chr2D 83.248 1952 295 20 905 2841 33228359 33230293 0.000000e+00 1764.0
17 TraesCS2A01G347700 chr2D 82.514 1933 291 24 923 2849 33307838 33309729 0.000000e+00 1653.0
18 TraesCS2A01G347700 chr2D 94.634 764 25 4 3462 4210 442439269 442438507 0.000000e+00 1170.0
19 TraesCS2A01G347700 chr2D 85.059 1111 141 14 862 1949 33562157 33563265 0.000000e+00 1109.0
20 TraesCS2A01G347700 chr2D 84.878 1111 143 14 862 1949 33575957 33577065 0.000000e+00 1098.0
21 TraesCS2A01G347700 chr2D 79.016 772 136 20 3006 3767 33309729 33310484 5.500000e-139 505.0
22 TraesCS2A01G347700 chr2D 78.472 720 141 10 3012 3725 33577075 33577786 4.340000e-125 459.0
23 TraesCS2A01G347700 chr2D 78.207 725 143 11 3008 3725 33563270 33563986 2.610000e-122 449.0
24 TraesCS2A01G347700 chr2D 78.571 630 125 8 2468 3090 442441149 442440523 1.590000e-109 407.0
25 TraesCS2A01G347700 chr2D 89.231 260 20 7 20 275 442442345 442442090 7.690000e-83 318.0
26 TraesCS2A01G347700 chr2D 87.006 177 19 2 4538 4712 442438261 442438087 3.760000e-46 196.0
27 TraesCS2A01G347700 chr2D 85.385 130 15 3 614 740 33364794 33364922 1.070000e-26 132.0
28 TraesCS2A01G347700 chr6A 80.362 1604 283 19 2158 3748 170521990 170520406 0.000000e+00 1188.0
29 TraesCS2A01G347700 chr7D 97.222 36 1 0 4421 4456 231013218 231013253 1.430000e-05 62.1
30 TraesCS2A01G347700 chr1A 100.000 30 0 0 3892 3921 516559458 516559487 6.650000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G347700 chr2A 585923991 585928750 4759 True 4583.0 8791 88.8355 1 4760 2 chr2A.!!$R1 4759
1 TraesCS2A01G347700 chr2A 36384207 36386880 2673 False 1104.5 1712 80.8465 917 3767 2 chr2A.!!$F2 2850
2 TraesCS2A01G347700 chr2A 36408948 36409474 526 False 547.0 547 85.4990 917 1443 1 chr2A.!!$F1 526
3 TraesCS2A01G347700 chr2B 521974261 521978807 4546 True 1227.2 5053 89.3530 25 4712 5 chr2B.!!$R1 4687
4 TraesCS2A01G347700 chr2B 55177934 55180587 2653 False 1112.0 1712 81.1595 924 3748 2 chr2B.!!$F1 2824
5 TraesCS2A01G347700 chr2B 55691427 55692549 1122 False 322.0 503 77.5130 2772 3739 2 chr2B.!!$F2 967
6 TraesCS2A01G347700 chr2D 33228359 33230293 1934 False 1764.0 1764 83.2480 905 2841 1 chr2D.!!$F1 1936
7 TraesCS2A01G347700 chr2D 442438087 442442345 4258 True 1203.8 3928 88.7484 20 4712 5 chr2D.!!$R1 4692
8 TraesCS2A01G347700 chr2D 33307838 33310484 2646 False 1079.0 1653 80.7650 923 3767 2 chr2D.!!$F2 2844
9 TraesCS2A01G347700 chr2D 33364794 33367041 2247 False 1005.5 1879 84.7150 614 2876 2 chr2D.!!$F3 2262
10 TraesCS2A01G347700 chr2D 33562157 33563986 1829 False 779.0 1109 81.6330 862 3725 2 chr2D.!!$F4 2863
11 TraesCS2A01G347700 chr2D 33575957 33577786 1829 False 778.5 1098 81.6750 862 3725 2 chr2D.!!$F5 2863
12 TraesCS2A01G347700 chr6A 170520406 170521990 1584 True 1188.0 1188 80.3620 2158 3748 1 chr6A.!!$R1 1590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
569 667 0.036164 CACAATCCACCGGAGAACCA 59.964 55.0 9.46 0.0 34.05 3.67 F
1686 1917 0.108585 ATTTCACGACAGGCACCAGT 59.891 50.0 0.00 0.0 0.00 4.00 F
2028 2263 0.811616 GGGAGAGGCAACATGCTACG 60.812 60.0 2.00 0.0 44.28 3.51 F
3137 3659 0.035458 AGACTGCTTCCCAAGTTCGG 59.965 55.0 0.00 0.0 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 2298 0.534412 ATGTCCTCTGTTCTCAGCCG 59.466 55.0 0.00 0.00 41.10 5.52 R
2933 3452 0.459237 CGCATCTTGCTTCTCTCCGT 60.459 55.0 0.00 0.00 42.25 4.69 R
3602 4137 1.343069 GGTCTCCACAGTTGTCTCCT 58.657 55.0 0.00 0.00 0.00 3.69 R
4234 4989 0.378257 CATCGCAGGTGCACCATTAC 59.622 55.0 36.39 20.75 42.21 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.202818 TCACAGCCAATGGAGGTGATTAT 59.797 43.478 18.31 0.00 34.22 1.28
105 106 2.746997 CACTGATGAGTGGACTGCG 58.253 57.895 4.13 0.00 45.26 5.18
107 108 2.125952 TGATGAGTGGACTGCGCG 60.126 61.111 0.00 0.00 0.00 6.86
112 113 0.735978 TGAGTGGACTGCGCGTATTG 60.736 55.000 8.43 0.00 0.00 1.90
113 114 0.736325 GAGTGGACTGCGCGTATTGT 60.736 55.000 8.43 0.00 0.00 2.71
114 115 0.528924 AGTGGACTGCGCGTATTGTA 59.471 50.000 8.43 0.00 0.00 2.41
115 116 0.921347 GTGGACTGCGCGTATTGTAG 59.079 55.000 8.43 0.00 0.00 2.74
116 117 0.528924 TGGACTGCGCGTATTGTAGT 59.471 50.000 8.43 0.00 0.00 2.73
121 125 1.062002 CTGCGCGTATTGTAGTTTGGG 59.938 52.381 8.43 0.00 0.00 4.12
130 134 6.757947 GCGTATTGTAGTTTGGGTGATAACTA 59.242 38.462 0.00 0.00 36.16 2.24
135 139 8.654485 TTGTAGTTTGGGTGATAACTAGAGTA 57.346 34.615 0.00 0.00 37.48 2.59
137 141 6.205101 AGTTTGGGTGATAACTAGAGTACG 57.795 41.667 0.00 0.00 33.06 3.67
142 147 4.025313 GGGTGATAACTAGAGTACGACGAC 60.025 50.000 0.00 0.00 0.00 4.34
143 148 4.317698 GGTGATAACTAGAGTACGACGACG 60.318 50.000 5.58 5.58 45.75 5.12
162 167 5.105635 ACGACGTGACCATTTCCTTTATCTA 60.106 40.000 0.00 0.00 0.00 1.98
234 239 9.558648 TGATCGAATAAAGACAAATTTGATGTG 57.441 29.630 24.64 0.00 36.68 3.21
235 240 9.559958 GATCGAATAAAGACAAATTTGATGTGT 57.440 29.630 24.64 1.87 36.68 3.72
275 280 5.593909 ACAGAAGGTAGAGAGACATCTGATG 59.406 44.000 15.83 15.83 37.83 3.07
277 282 6.770303 CAGAAGGTAGAGAGACATCTGATGTA 59.230 42.308 22.31 4.01 45.03 2.29
278 283 7.448161 CAGAAGGTAGAGAGACATCTGATGTAT 59.552 40.741 22.31 19.70 45.03 2.29
279 284 8.004215 AGAAGGTAGAGAGACATCTGATGTATT 58.996 37.037 22.31 13.98 45.03 1.89
280 285 9.290988 GAAGGTAGAGAGACATCTGATGTATTA 57.709 37.037 22.31 7.17 45.03 0.98
281 286 9.647918 AAGGTAGAGAGACATCTGATGTATTAA 57.352 33.333 22.31 4.89 45.03 1.40
282 287 9.295825 AGGTAGAGAGACATCTGATGTATTAAG 57.704 37.037 22.31 0.00 45.03 1.85
283 288 9.073475 GGTAGAGAGACATCTGATGTATTAAGT 57.927 37.037 22.31 9.17 45.03 2.24
284 289 9.891828 GTAGAGAGACATCTGATGTATTAAGTG 57.108 37.037 22.31 0.00 45.03 3.16
285 290 8.759481 AGAGAGACATCTGATGTATTAAGTGA 57.241 34.615 22.31 0.00 45.03 3.41
286 291 9.365906 AGAGAGACATCTGATGTATTAAGTGAT 57.634 33.333 22.31 2.83 45.03 3.06
287 292 9.979578 GAGAGACATCTGATGTATTAAGTGATT 57.020 33.333 22.31 0.00 45.03 2.57
289 294 9.202273 GAGACATCTGATGTATTAAGTGATTCC 57.798 37.037 22.31 6.27 45.03 3.01
291 296 8.668510 ACATCTGATGTATTAAGTGATTCCAC 57.331 34.615 21.10 0.00 42.78 4.02
304 309 3.743396 GTGATTCCACTCACTGAAGTCAC 59.257 47.826 0.00 0.00 41.87 3.67
305 310 3.643320 TGATTCCACTCACTGAAGTCACT 59.357 43.478 0.00 0.00 0.00 3.41
306 311 3.459232 TTCCACTCACTGAAGTCACTG 57.541 47.619 0.00 0.00 0.00 3.66
307 312 2.666317 TCCACTCACTGAAGTCACTGA 58.334 47.619 0.00 0.00 0.00 3.41
310 315 3.006217 CCACTCACTGAAGTCACTGATGA 59.994 47.826 0.00 0.00 0.00 2.92
311 316 4.502087 CCACTCACTGAAGTCACTGATGAA 60.502 45.833 0.00 0.00 36.31 2.57
312 317 4.685165 CACTCACTGAAGTCACTGATGAAG 59.315 45.833 0.00 0.00 36.31 3.02
314 319 3.643320 TCACTGAAGTCACTGATGAAGGT 59.357 43.478 0.00 0.00 36.31 3.50
316 321 3.643320 ACTGAAGTCACTGATGAAGGTCA 59.357 43.478 0.00 0.00 36.31 4.02
317 322 3.993081 CTGAAGTCACTGATGAAGGTCAC 59.007 47.826 0.00 0.00 36.31 3.67
318 323 3.244215 TGAAGTCACTGATGAAGGTCACC 60.244 47.826 0.00 0.00 36.31 4.02
320 325 2.909006 AGTCACTGATGAAGGTCACCAT 59.091 45.455 0.00 0.00 36.31 3.55
321 326 3.328931 AGTCACTGATGAAGGTCACCATT 59.671 43.478 0.00 0.00 36.31 3.16
322 327 4.532126 AGTCACTGATGAAGGTCACCATTA 59.468 41.667 0.00 0.00 36.31 1.90
323 328 5.190528 AGTCACTGATGAAGGTCACCATTAT 59.809 40.000 0.00 0.00 36.31 1.28
324 329 5.882557 GTCACTGATGAAGGTCACCATTATT 59.117 40.000 0.00 0.00 36.31 1.40
325 330 6.375455 GTCACTGATGAAGGTCACCATTATTT 59.625 38.462 0.00 0.00 36.31 1.40
326 331 6.947733 TCACTGATGAAGGTCACCATTATTTT 59.052 34.615 0.00 0.00 0.00 1.82
327 332 7.451255 TCACTGATGAAGGTCACCATTATTTTT 59.549 33.333 0.00 0.00 0.00 1.94
328 333 7.756722 CACTGATGAAGGTCACCATTATTTTTC 59.243 37.037 0.00 0.00 0.00 2.29
329 334 7.671398 ACTGATGAAGGTCACCATTATTTTTCT 59.329 33.333 0.00 0.00 0.00 2.52
330 335 8.421249 TGATGAAGGTCACCATTATTTTTCTT 57.579 30.769 0.00 0.00 0.00 2.52
331 336 8.522830 TGATGAAGGTCACCATTATTTTTCTTC 58.477 33.333 0.00 0.00 0.00 2.87
332 337 6.908825 TGAAGGTCACCATTATTTTTCTTCG 58.091 36.000 0.00 0.00 33.08 3.79
333 338 6.488683 TGAAGGTCACCATTATTTTTCTTCGT 59.511 34.615 0.00 0.00 33.08 3.85
334 339 6.894339 AGGTCACCATTATTTTTCTTCGTT 57.106 33.333 0.00 0.00 0.00 3.85
335 340 7.284919 AGGTCACCATTATTTTTCTTCGTTT 57.715 32.000 0.00 0.00 0.00 3.60
336 341 7.722363 AGGTCACCATTATTTTTCTTCGTTTT 58.278 30.769 0.00 0.00 0.00 2.43
337 342 7.651704 AGGTCACCATTATTTTTCTTCGTTTTG 59.348 33.333 0.00 0.00 0.00 2.44
338 343 7.436970 GGTCACCATTATTTTTCTTCGTTTTGT 59.563 33.333 0.00 0.00 0.00 2.83
339 344 9.453325 GTCACCATTATTTTTCTTCGTTTTGTA 57.547 29.630 0.00 0.00 0.00 2.41
340 345 9.672086 TCACCATTATTTTTCTTCGTTTTGTAG 57.328 29.630 0.00 0.00 0.00 2.74
341 346 9.458374 CACCATTATTTTTCTTCGTTTTGTAGT 57.542 29.630 0.00 0.00 0.00 2.73
342 347 9.458374 ACCATTATTTTTCTTCGTTTTGTAGTG 57.542 29.630 0.00 0.00 0.00 2.74
343 348 8.911662 CCATTATTTTTCTTCGTTTTGTAGTGG 58.088 33.333 0.00 0.00 0.00 4.00
344 349 9.672086 CATTATTTTTCTTCGTTTTGTAGTGGA 57.328 29.630 0.00 0.00 0.00 4.02
346 351 9.672086 TTATTTTTCTTCGTTTTGTAGTGGATG 57.328 29.630 0.00 0.00 0.00 3.51
347 352 5.682943 TTTCTTCGTTTTGTAGTGGATGG 57.317 39.130 0.00 0.00 0.00 3.51
348 353 4.610605 TCTTCGTTTTGTAGTGGATGGA 57.389 40.909 0.00 0.00 0.00 3.41
349 354 4.566004 TCTTCGTTTTGTAGTGGATGGAG 58.434 43.478 0.00 0.00 0.00 3.86
350 355 4.039973 TCTTCGTTTTGTAGTGGATGGAGT 59.960 41.667 0.00 0.00 0.00 3.85
351 356 3.659786 TCGTTTTGTAGTGGATGGAGTG 58.340 45.455 0.00 0.00 0.00 3.51
352 357 2.742053 CGTTTTGTAGTGGATGGAGTGG 59.258 50.000 0.00 0.00 0.00 4.00
353 358 2.488153 GTTTTGTAGTGGATGGAGTGGC 59.512 50.000 0.00 0.00 0.00 5.01
354 359 1.656587 TTGTAGTGGATGGAGTGGCT 58.343 50.000 0.00 0.00 0.00 4.75
355 360 1.656587 TGTAGTGGATGGAGTGGCTT 58.343 50.000 0.00 0.00 0.00 4.35
356 361 1.985159 TGTAGTGGATGGAGTGGCTTT 59.015 47.619 0.00 0.00 0.00 3.51
357 362 3.178046 TGTAGTGGATGGAGTGGCTTTA 58.822 45.455 0.00 0.00 0.00 1.85
358 363 3.780294 TGTAGTGGATGGAGTGGCTTTAT 59.220 43.478 0.00 0.00 0.00 1.40
359 364 4.227300 TGTAGTGGATGGAGTGGCTTTATT 59.773 41.667 0.00 0.00 0.00 1.40
360 365 5.427157 TGTAGTGGATGGAGTGGCTTTATTA 59.573 40.000 0.00 0.00 0.00 0.98
361 366 5.653255 AGTGGATGGAGTGGCTTTATTAT 57.347 39.130 0.00 0.00 0.00 1.28
362 367 5.625150 AGTGGATGGAGTGGCTTTATTATC 58.375 41.667 0.00 0.00 0.00 1.75
363 368 5.370880 AGTGGATGGAGTGGCTTTATTATCT 59.629 40.000 0.00 0.00 0.00 1.98
364 369 6.064717 GTGGATGGAGTGGCTTTATTATCTT 58.935 40.000 0.00 0.00 0.00 2.40
365 370 6.205658 GTGGATGGAGTGGCTTTATTATCTTC 59.794 42.308 0.00 0.00 0.00 2.87
366 371 5.707764 GGATGGAGTGGCTTTATTATCTTCC 59.292 44.000 0.00 0.00 0.00 3.46
367 372 5.048846 TGGAGTGGCTTTATTATCTTCCC 57.951 43.478 0.00 0.00 0.00 3.97
368 373 4.476846 TGGAGTGGCTTTATTATCTTCCCA 59.523 41.667 0.00 0.00 0.00 4.37
369 374 5.044476 TGGAGTGGCTTTATTATCTTCCCAA 60.044 40.000 0.00 0.00 0.00 4.12
370 375 5.532779 GGAGTGGCTTTATTATCTTCCCAAG 59.467 44.000 0.00 0.00 0.00 3.61
371 376 4.889995 AGTGGCTTTATTATCTTCCCAAGC 59.110 41.667 0.00 0.00 36.68 4.01
372 377 4.889995 GTGGCTTTATTATCTTCCCAAGCT 59.110 41.667 0.00 0.00 37.41 3.74
373 378 6.062095 GTGGCTTTATTATCTTCCCAAGCTA 58.938 40.000 0.00 0.00 37.41 3.32
374 379 6.717084 GTGGCTTTATTATCTTCCCAAGCTAT 59.283 38.462 0.00 0.00 37.41 2.97
375 380 6.942576 TGGCTTTATTATCTTCCCAAGCTATC 59.057 38.462 0.00 0.00 37.41 2.08
376 381 6.942576 GGCTTTATTATCTTCCCAAGCTATCA 59.057 38.462 0.00 0.00 37.41 2.15
377 382 7.120432 GGCTTTATTATCTTCCCAAGCTATCAG 59.880 40.741 0.00 0.00 37.41 2.90
378 383 7.663493 GCTTTATTATCTTCCCAAGCTATCAGT 59.337 37.037 0.00 0.00 34.94 3.41
379 384 9.566432 CTTTATTATCTTCCCAAGCTATCAGTT 57.434 33.333 0.00 0.00 0.00 3.16
380 385 8.908786 TTATTATCTTCCCAAGCTATCAGTTG 57.091 34.615 0.00 0.00 0.00 3.16
381 386 4.851639 ATCTTCCCAAGCTATCAGTTGT 57.148 40.909 0.00 0.00 0.00 3.32
382 387 4.207891 TCTTCCCAAGCTATCAGTTGTC 57.792 45.455 0.00 0.00 0.00 3.18
383 388 3.582647 TCTTCCCAAGCTATCAGTTGTCA 59.417 43.478 0.00 0.00 0.00 3.58
384 389 4.225942 TCTTCCCAAGCTATCAGTTGTCAT 59.774 41.667 0.00 0.00 0.00 3.06
385 390 4.574674 TCCCAAGCTATCAGTTGTCATT 57.425 40.909 0.00 0.00 0.00 2.57
386 391 4.264253 TCCCAAGCTATCAGTTGTCATTG 58.736 43.478 0.00 0.00 0.00 2.82
387 392 4.012374 CCCAAGCTATCAGTTGTCATTGT 58.988 43.478 0.00 0.00 0.00 2.71
388 393 4.095483 CCCAAGCTATCAGTTGTCATTGTC 59.905 45.833 0.00 0.00 0.00 3.18
389 394 4.095483 CCAAGCTATCAGTTGTCATTGTCC 59.905 45.833 0.00 0.00 0.00 4.02
390 395 4.833478 AGCTATCAGTTGTCATTGTCCT 57.167 40.909 0.00 0.00 0.00 3.85
391 396 5.171339 AGCTATCAGTTGTCATTGTCCTT 57.829 39.130 0.00 0.00 0.00 3.36
392 397 5.564550 AGCTATCAGTTGTCATTGTCCTTT 58.435 37.500 0.00 0.00 0.00 3.11
393 398 6.006449 AGCTATCAGTTGTCATTGTCCTTTT 58.994 36.000 0.00 0.00 0.00 2.27
394 399 6.491403 AGCTATCAGTTGTCATTGTCCTTTTT 59.509 34.615 0.00 0.00 0.00 1.94
413 418 4.343811 TTTTCTTCTTTTCGAACACGCA 57.656 36.364 0.00 0.00 0.00 5.24
414 419 4.545823 TTTCTTCTTTTCGAACACGCAT 57.454 36.364 0.00 0.00 0.00 4.73
415 420 3.788434 TCTTCTTTTCGAACACGCATC 57.212 42.857 0.00 0.00 0.00 3.91
416 421 3.390135 TCTTCTTTTCGAACACGCATCT 58.610 40.909 0.00 0.00 0.00 2.90
417 422 4.552355 TCTTCTTTTCGAACACGCATCTA 58.448 39.130 0.00 0.00 0.00 1.98
418 423 4.986034 TCTTCTTTTCGAACACGCATCTAA 59.014 37.500 0.00 0.00 0.00 2.10
419 424 5.464057 TCTTCTTTTCGAACACGCATCTAAA 59.536 36.000 0.00 0.00 0.00 1.85
420 425 5.856126 TCTTTTCGAACACGCATCTAAAT 57.144 34.783 0.00 0.00 0.00 1.40
421 426 5.617609 TCTTTTCGAACACGCATCTAAATG 58.382 37.500 0.00 0.00 35.87 2.32
434 439 3.469899 TCTAAATGCGTGTCATTGTGC 57.530 42.857 0.00 0.00 44.23 4.57
435 440 2.810852 TCTAAATGCGTGTCATTGTGCA 59.189 40.909 0.00 0.00 44.23 4.57
439 444 2.898181 TGCGTGTCATTGTGCATTAG 57.102 45.000 0.00 0.00 31.31 1.73
440 445 2.421619 TGCGTGTCATTGTGCATTAGA 58.578 42.857 0.00 0.00 31.31 2.10
441 446 2.810852 TGCGTGTCATTGTGCATTAGAA 59.189 40.909 0.00 0.00 31.31 2.10
442 447 3.120234 TGCGTGTCATTGTGCATTAGAAG 60.120 43.478 0.00 0.00 31.31 2.85
443 448 3.125146 GCGTGTCATTGTGCATTAGAAGA 59.875 43.478 0.00 0.00 0.00 2.87
444 449 4.378356 GCGTGTCATTGTGCATTAGAAGAA 60.378 41.667 0.00 0.00 0.00 2.52
445 450 5.082059 CGTGTCATTGTGCATTAGAAGAAC 58.918 41.667 0.00 0.00 0.00 3.01
446 451 5.334028 CGTGTCATTGTGCATTAGAAGAACA 60.334 40.000 0.00 0.00 0.00 3.18
447 452 5.853282 GTGTCATTGTGCATTAGAAGAACAC 59.147 40.000 0.00 0.00 0.00 3.32
448 453 5.048782 TGTCATTGTGCATTAGAAGAACACC 60.049 40.000 0.00 0.00 0.00 4.16
449 454 5.048782 GTCATTGTGCATTAGAAGAACACCA 60.049 40.000 0.00 0.00 0.00 4.17
450 455 5.181811 TCATTGTGCATTAGAAGAACACCAG 59.818 40.000 0.00 0.00 0.00 4.00
451 456 4.350368 TGTGCATTAGAAGAACACCAGA 57.650 40.909 0.00 0.00 0.00 3.86
452 457 4.318332 TGTGCATTAGAAGAACACCAGAG 58.682 43.478 0.00 0.00 0.00 3.35
453 458 4.040339 TGTGCATTAGAAGAACACCAGAGA 59.960 41.667 0.00 0.00 0.00 3.10
454 459 4.997395 GTGCATTAGAAGAACACCAGAGAA 59.003 41.667 0.00 0.00 0.00 2.87
455 460 5.121454 GTGCATTAGAAGAACACCAGAGAAG 59.879 44.000 0.00 0.00 0.00 2.85
456 461 4.633565 GCATTAGAAGAACACCAGAGAAGG 59.366 45.833 0.00 0.00 0.00 3.46
457 462 2.849294 AGAAGAACACCAGAGAAGGC 57.151 50.000 0.00 0.00 0.00 4.35
458 463 2.050144 AGAAGAACACCAGAGAAGGCA 58.950 47.619 0.00 0.00 0.00 4.75
459 464 2.038295 AGAAGAACACCAGAGAAGGCAG 59.962 50.000 0.00 0.00 0.00 4.85
460 465 1.722034 AGAACACCAGAGAAGGCAGA 58.278 50.000 0.00 0.00 0.00 4.26
461 466 1.622811 AGAACACCAGAGAAGGCAGAG 59.377 52.381 0.00 0.00 0.00 3.35
462 467 1.620819 GAACACCAGAGAAGGCAGAGA 59.379 52.381 0.00 0.00 0.00 3.10
463 468 1.265236 ACACCAGAGAAGGCAGAGAG 58.735 55.000 0.00 0.00 0.00 3.20
464 469 1.265236 CACCAGAGAAGGCAGAGAGT 58.735 55.000 0.00 0.00 0.00 3.24
465 470 2.225142 ACACCAGAGAAGGCAGAGAGTA 60.225 50.000 0.00 0.00 0.00 2.59
466 471 2.165437 CACCAGAGAAGGCAGAGAGTAC 59.835 54.545 0.00 0.00 0.00 2.73
467 472 2.225142 ACCAGAGAAGGCAGAGAGTACA 60.225 50.000 0.00 0.00 0.00 2.90
468 473 2.828520 CCAGAGAAGGCAGAGAGTACAA 59.171 50.000 0.00 0.00 0.00 2.41
469 474 3.119173 CCAGAGAAGGCAGAGAGTACAAG 60.119 52.174 0.00 0.00 0.00 3.16
470 475 3.096092 AGAGAAGGCAGAGAGTACAAGG 58.904 50.000 0.00 0.00 0.00 3.61
471 476 1.552792 AGAAGGCAGAGAGTACAAGGC 59.447 52.381 0.00 0.00 0.00 4.35
476 481 1.825474 GCAGAGAGTACAAGGCACCTA 59.175 52.381 0.00 0.00 0.00 3.08
499 504 4.394729 TGGTGGAGTTGTAATTGTCCTTC 58.605 43.478 0.00 0.00 0.00 3.46
502 507 6.177610 GGTGGAGTTGTAATTGTCCTTCATA 58.822 40.000 0.00 0.00 0.00 2.15
503 508 6.657541 GGTGGAGTTGTAATTGTCCTTCATAA 59.342 38.462 0.00 0.00 0.00 1.90
534 632 5.940470 TGAGAAAGATACCAAAAAGGAGAGC 59.060 40.000 0.00 0.00 41.22 4.09
535 633 5.880901 AGAAAGATACCAAAAAGGAGAGCA 58.119 37.500 0.00 0.00 41.22 4.26
536 634 6.306987 AGAAAGATACCAAAAAGGAGAGCAA 58.693 36.000 0.00 0.00 41.22 3.91
539 637 7.544804 AAGATACCAAAAAGGAGAGCAAAAT 57.455 32.000 0.00 0.00 41.22 1.82
541 639 8.056407 AGATACCAAAAAGGAGAGCAAAATAC 57.944 34.615 0.00 0.00 41.22 1.89
544 642 4.917415 CCAAAAAGGAGAGCAAAATACACG 59.083 41.667 0.00 0.00 41.22 4.49
545 643 5.507315 CCAAAAAGGAGAGCAAAATACACGT 60.507 40.000 0.00 0.00 41.22 4.49
546 644 5.767816 AAAAGGAGAGCAAAATACACGTT 57.232 34.783 0.00 0.00 0.00 3.99
547 645 6.870971 AAAAGGAGAGCAAAATACACGTTA 57.129 33.333 0.00 0.00 0.00 3.18
548 646 6.870971 AAAGGAGAGCAAAATACACGTTAA 57.129 33.333 0.00 0.00 0.00 2.01
549 647 5.857822 AGGAGAGCAAAATACACGTTAAC 57.142 39.130 0.00 0.00 0.00 2.01
550 648 4.694037 AGGAGAGCAAAATACACGTTAACC 59.306 41.667 0.00 0.00 0.00 2.85
551 649 4.453136 GGAGAGCAAAATACACGTTAACCA 59.547 41.667 0.00 0.00 0.00 3.67
552 650 5.352643 AGAGCAAAATACACGTTAACCAC 57.647 39.130 0.00 0.00 0.00 4.16
553 651 4.817464 AGAGCAAAATACACGTTAACCACA 59.183 37.500 0.00 0.00 0.00 4.17
554 652 5.297278 AGAGCAAAATACACGTTAACCACAA 59.703 36.000 0.00 0.00 0.00 3.33
555 653 6.016610 AGAGCAAAATACACGTTAACCACAAT 60.017 34.615 0.00 0.00 0.00 2.71
556 654 6.146898 AGCAAAATACACGTTAACCACAATC 58.853 36.000 0.00 0.00 0.00 2.67
557 655 5.343860 GCAAAATACACGTTAACCACAATCC 59.656 40.000 0.00 0.00 0.00 3.01
558 656 6.439599 CAAAATACACGTTAACCACAATCCA 58.560 36.000 0.00 0.00 0.00 3.41
559 657 5.616488 AATACACGTTAACCACAATCCAC 57.384 39.130 0.00 0.00 0.00 4.02
560 658 2.223745 ACACGTTAACCACAATCCACC 58.776 47.619 0.00 0.00 0.00 4.61
561 659 1.195900 CACGTTAACCACAATCCACCG 59.804 52.381 0.00 0.00 0.00 4.94
562 660 0.800012 CGTTAACCACAATCCACCGG 59.200 55.000 0.00 0.00 0.00 5.28
563 661 1.608542 CGTTAACCACAATCCACCGGA 60.609 52.381 9.46 0.00 35.55 5.14
564 662 2.081462 GTTAACCACAATCCACCGGAG 58.919 52.381 9.46 0.00 34.05 4.63
565 663 1.646912 TAACCACAATCCACCGGAGA 58.353 50.000 9.46 4.59 34.05 3.71
566 664 0.768622 AACCACAATCCACCGGAGAA 59.231 50.000 9.46 0.00 34.05 2.87
567 665 0.036306 ACCACAATCCACCGGAGAAC 59.964 55.000 9.46 0.00 34.05 3.01
568 666 0.676782 CCACAATCCACCGGAGAACC 60.677 60.000 9.46 0.00 34.05 3.62
569 667 0.036164 CACAATCCACCGGAGAACCA 59.964 55.000 9.46 0.00 34.05 3.67
573 671 2.270874 ATCCACCGGAGAACCATGGC 62.271 60.000 13.04 0.00 40.15 4.40
585 683 0.907704 ACCATGGCGACTAACCTCCA 60.908 55.000 13.04 0.00 0.00 3.86
591 689 2.029623 GGCGACTAACCTCCAGTGATA 58.970 52.381 0.00 0.00 0.00 2.15
598 696 4.716784 ACTAACCTCCAGTGATATGCAGAA 59.283 41.667 0.00 0.00 0.00 3.02
610 709 9.276590 CAGTGATATGCAGAATTTACTGGAATA 57.723 33.333 15.27 0.00 41.12 1.75
618 717 9.120538 TGCAGAATTTACTGGAATATAGGAAAC 57.879 33.333 0.00 0.00 35.47 2.78
664 766 5.447010 GCTTTCTGATCAGTTGAGCACATAC 60.447 44.000 27.16 9.56 35.30 2.39
701 803 2.426738 TGCCACATGTTTAGCCTATTGC 59.573 45.455 0.00 0.00 41.71 3.56
715 817 9.860650 TTTAGCCTATTGCCTTATCTTATGAAA 57.139 29.630 0.00 0.00 42.71 2.69
717 819 7.290061 AGCCTATTGCCTTATCTTATGAAACA 58.710 34.615 0.00 0.00 42.71 2.83
764 878 6.739331 AAAAACCAGGTATTTGATGTTGGA 57.261 33.333 0.00 0.00 0.00 3.53
828 943 3.744238 TTTTTAGGGTGGCAAGAAAGC 57.256 42.857 0.00 0.00 0.00 3.51
854 969 5.177327 AGTGTTGTTCTTTTGTTGCTTGTTG 59.823 36.000 0.00 0.00 0.00 3.33
927 1154 4.808558 TCATAATTCTGTGTTTTGCAGGC 58.191 39.130 0.00 0.00 34.89 4.85
929 1156 3.375782 AATTCTGTGTTTTGCAGGCTC 57.624 42.857 0.00 0.00 34.89 4.70
1036 1267 0.316196 GTGTCAACGACAACAGCTGC 60.316 55.000 15.27 0.00 44.49 5.25
1055 1286 0.662619 CGTGGCTCAAACTCTGCAAA 59.337 50.000 0.00 0.00 0.00 3.68
1123 1354 3.894427 TCAGTACCACCATGCAATTTTGT 59.106 39.130 0.00 0.00 0.00 2.83
1443 1674 1.464997 GAAGATCGAACTGTTGGGTGC 59.535 52.381 0.00 0.00 0.00 5.01
1449 1680 1.077357 AACTGTTGGGTGCGGAACA 60.077 52.632 0.00 0.00 0.00 3.18
1458 1689 1.270678 GGGTGCGGAACATATAGGGTC 60.271 57.143 0.00 0.00 0.00 4.46
1521 1752 4.095483 CACTTTTCTCATCCTGTACATGCC 59.905 45.833 0.00 0.00 0.00 4.40
1551 1782 6.378564 TCACTGGTAGAAGGAACTCTTATGAG 59.621 42.308 4.14 4.14 45.43 2.90
1641 1872 5.184096 TGCTCACAACCAAAAGAACTACAAA 59.816 36.000 0.00 0.00 0.00 2.83
1686 1917 0.108585 ATTTCACGACAGGCACCAGT 59.891 50.000 0.00 0.00 0.00 4.00
1875 2106 1.761784 CTGGAGCTTGATCCTACAGCT 59.238 52.381 6.48 5.71 40.29 4.24
1892 2123 1.004862 AGCTCTTCCCCTTAACTTGGC 59.995 52.381 0.00 0.00 0.00 4.52
1940 2175 2.959465 AGCAGTTCACTAAAAGGCCT 57.041 45.000 0.00 0.00 0.00 5.19
2003 2238 4.868172 ATTCTCACAAGGGATCCATGAA 57.132 40.909 20.25 10.47 0.00 2.57
2028 2263 0.811616 GGGAGAGGCAACATGCTACG 60.812 60.000 2.00 0.00 44.28 3.51
2063 2298 2.418976 GGATCTTTACAAAGACACCGGC 59.581 50.000 0.00 0.00 46.80 6.13
2067 2302 2.386064 TTACAAAGACACCGGCGGCT 62.386 55.000 28.71 12.88 0.00 5.52
2078 2313 2.125350 GGCGGCTGAGAACAGAGG 60.125 66.667 0.00 0.00 46.03 3.69
2153 2388 8.243426 TGGTCATATTGTTCAAGCAAAAGTATC 58.757 33.333 0.00 0.00 31.63 2.24
2169 2404 8.650714 GCAAAAGTATCATGTCCTGAATTTTTC 58.349 33.333 0.00 0.00 37.44 2.29
2206 2441 7.439381 ACTTCGAGGTGTAAATCAGTTTAGAA 58.561 34.615 0.00 0.00 30.76 2.10
2388 2623 2.863704 GCCTGTTGCTTGTGGACATTTC 60.864 50.000 0.00 0.00 36.87 2.17
2472 2707 5.471456 TCAGAAAAGCAAGATGAGAAACTCC 59.529 40.000 0.00 0.00 0.00 3.85
2601 2836 6.115446 TGTTCAAGTTGTCTCTGATTTCACT 58.885 36.000 2.11 0.00 0.00 3.41
2933 3452 0.748450 CGCAAGGGATCCGTTAGGTA 59.252 55.000 18.93 0.00 39.05 3.08
2972 3491 2.476686 CGACATGCATGAACACATGGAC 60.477 50.000 32.75 9.15 46.35 4.02
3002 3521 5.956068 AAGATGCCAAAAGAAGAGAAGAC 57.044 39.130 0.00 0.00 0.00 3.01
3057 3579 5.132502 ACACATGTTGGTGAGAAATCTGAA 58.867 37.500 0.00 0.00 41.32 3.02
3070 3592 7.492669 GTGAGAAATCTGAAGATATTGTCCGAA 59.507 37.037 0.00 0.00 33.73 4.30
3128 3650 4.900635 TTTCAGAAACAAGACTGCTTCC 57.099 40.909 0.00 0.00 34.57 3.46
3137 3659 0.035458 AGACTGCTTCCCAAGTTCGG 59.965 55.000 0.00 0.00 0.00 4.30
3154 3676 1.997874 GGACCTGGGCAGATCTGGT 60.998 63.158 23.89 12.92 38.81 4.00
3358 3889 3.270877 GGCCTTATGACTTACACTGGTG 58.729 50.000 0.00 0.00 0.00 4.17
3493 4024 2.821366 CTGGATGGACTGCACGCC 60.821 66.667 0.00 0.00 0.00 5.68
3514 4049 4.260948 GCCATTTTAGCAGCTGTGACTATC 60.261 45.833 16.64 0.00 0.00 2.08
3602 4137 5.632118 TGGTTACAGGGCAGTATTTACAAA 58.368 37.500 0.00 0.00 0.00 2.83
3717 4252 0.603707 TTCGAGGCTGTTTGGAGCTG 60.604 55.000 0.00 0.00 39.11 4.24
3879 4426 0.530744 TTACTCCTGCAGCAGTACCG 59.469 55.000 17.25 5.86 0.00 4.02
3925 4472 3.881937 ACCACGACACTTATTAGGGAC 57.118 47.619 0.00 0.00 0.00 4.46
4006 4553 3.631250 TGAACTGCCACTCTTCCTTTTT 58.369 40.909 0.00 0.00 0.00 1.94
4007 4554 3.632145 TGAACTGCCACTCTTCCTTTTTC 59.368 43.478 0.00 0.00 0.00 2.29
4008 4555 3.584733 ACTGCCACTCTTCCTTTTTCT 57.415 42.857 0.00 0.00 0.00 2.52
4009 4556 3.481453 ACTGCCACTCTTCCTTTTTCTC 58.519 45.455 0.00 0.00 0.00 2.87
4010 4557 3.117888 ACTGCCACTCTTCCTTTTTCTCA 60.118 43.478 0.00 0.00 0.00 3.27
4011 4558 4.077822 CTGCCACTCTTCCTTTTTCTCAT 58.922 43.478 0.00 0.00 0.00 2.90
4012 4559 5.221925 ACTGCCACTCTTCCTTTTTCTCATA 60.222 40.000 0.00 0.00 0.00 2.15
4013 4560 5.248640 TGCCACTCTTCCTTTTTCTCATAG 58.751 41.667 0.00 0.00 0.00 2.23
4071 4826 6.037281 GGGTCCTCGAAAATCTCTGTAAAATC 59.963 42.308 0.00 0.00 0.00 2.17
4105 4860 2.821969 AGCTTTGTGTTCATCCATCACC 59.178 45.455 0.00 0.00 0.00 4.02
4155 4910 3.129988 GCTCCCATTCATCTTGTTCTTGG 59.870 47.826 0.00 0.00 0.00 3.61
4172 4927 0.111446 TGGTTTTCTCGATGCCCCAA 59.889 50.000 0.00 0.00 0.00 4.12
4173 4928 0.526211 GGTTTTCTCGATGCCCCAAC 59.474 55.000 0.00 0.00 0.00 3.77
4175 4930 0.111446 TTTTCTCGATGCCCCAACCA 59.889 50.000 0.00 0.00 0.00 3.67
4214 4969 1.471119 CTAGAACTAGGACGGGCACA 58.529 55.000 0.00 0.00 0.00 4.57
4215 4970 1.405821 CTAGAACTAGGACGGGCACAG 59.594 57.143 0.00 0.00 0.00 3.66
4216 4971 1.448013 GAACTAGGACGGGCACAGC 60.448 63.158 0.00 0.00 0.00 4.40
4220 4975 0.321653 CTAGGACGGGCACAGCTTTT 60.322 55.000 0.00 0.00 0.00 2.27
4221 4976 0.321298 TAGGACGGGCACAGCTTTTC 60.321 55.000 0.00 0.00 0.00 2.29
4223 4978 1.244019 GGACGGGCACAGCTTTTCAT 61.244 55.000 0.00 0.00 0.00 2.57
4225 4980 1.135315 CGGGCACAGCTTTTCATCG 59.865 57.895 0.00 0.00 0.00 3.84
4227 4982 0.598065 GGGCACAGCTTTTCATCGTT 59.402 50.000 0.00 0.00 0.00 3.85
4229 4984 1.266718 GGCACAGCTTTTCATCGTTGA 59.733 47.619 0.00 0.00 0.00 3.18
4230 4985 2.287547 GGCACAGCTTTTCATCGTTGAA 60.288 45.455 4.80 4.80 40.09 2.69
4232 4987 3.548818 GCACAGCTTTTCATCGTTGAACT 60.549 43.478 8.41 0.82 41.50 3.01
4234 4989 5.377358 CACAGCTTTTCATCGTTGAACTAG 58.623 41.667 8.41 9.89 41.50 2.57
4236 4991 6.145534 CACAGCTTTTCATCGTTGAACTAGTA 59.854 38.462 8.41 0.00 41.50 1.82
4237 4992 6.704493 ACAGCTTTTCATCGTTGAACTAGTAA 59.296 34.615 8.41 0.16 41.50 2.24
4238 4993 7.387948 ACAGCTTTTCATCGTTGAACTAGTAAT 59.612 33.333 8.41 0.00 41.50 1.89
4239 4994 7.689812 CAGCTTTTCATCGTTGAACTAGTAATG 59.310 37.037 8.41 0.00 41.50 1.90
4241 4996 7.360946 GCTTTTCATCGTTGAACTAGTAATGGT 60.361 37.037 8.41 0.00 41.50 3.55
4242 4997 6.961359 TTCATCGTTGAACTAGTAATGGTG 57.039 37.500 4.80 0.00 36.94 4.17
4243 4998 4.868171 TCATCGTTGAACTAGTAATGGTGC 59.132 41.667 0.00 0.00 0.00 5.01
4245 5000 3.991773 TCGTTGAACTAGTAATGGTGCAC 59.008 43.478 8.80 8.80 0.00 4.57
4246 5001 3.124636 CGTTGAACTAGTAATGGTGCACC 59.875 47.826 29.67 29.67 0.00 5.01
4247 5002 4.324267 GTTGAACTAGTAATGGTGCACCT 58.676 43.478 34.75 19.61 36.82 4.00
4248 5003 3.937814 TGAACTAGTAATGGTGCACCTG 58.062 45.455 34.75 17.70 36.82 4.00
4249 5004 2.403252 ACTAGTAATGGTGCACCTGC 57.597 50.000 34.75 20.05 42.50 4.85
4250 5005 1.290203 CTAGTAATGGTGCACCTGCG 58.710 55.000 34.75 13.29 45.83 5.18
4251 5006 0.899019 TAGTAATGGTGCACCTGCGA 59.101 50.000 34.75 16.83 45.83 5.10
4252 5007 0.253044 AGTAATGGTGCACCTGCGAT 59.747 50.000 34.75 18.43 45.83 4.58
4259 5014 3.058160 GCACCTGCGATGCACCTT 61.058 61.111 0.00 0.00 42.88 3.50
4260 5015 2.872557 CACCTGCGATGCACCTTG 59.127 61.111 0.00 0.00 33.79 3.61
4262 5017 0.673333 CACCTGCGATGCACCTTGTA 60.673 55.000 0.00 0.00 33.79 2.41
4263 5018 0.673644 ACCTGCGATGCACCTTGTAC 60.674 55.000 0.00 0.00 33.79 2.90
4265 5020 0.673333 CTGCGATGCACCTTGTACCA 60.673 55.000 0.00 0.00 33.79 3.25
4266 5021 0.250510 TGCGATGCACCTTGTACCAA 60.251 50.000 0.00 0.00 31.71 3.67
4267 5022 0.878416 GCGATGCACCTTGTACCAAA 59.122 50.000 0.00 0.00 0.00 3.28
4268 5023 1.135689 GCGATGCACCTTGTACCAAAG 60.136 52.381 0.00 0.00 0.00 2.77
4292 5047 7.158099 GGATACTGCCTGAAAATTTACTGTT 57.842 36.000 0.00 0.00 0.00 3.16
4293 5048 7.029563 GGATACTGCCTGAAAATTTACTGTTG 58.970 38.462 0.00 0.00 0.00 3.33
4328 5083 3.634397 CTCTGTCAGGAAGGCCAATAA 57.366 47.619 5.01 0.00 36.29 1.40
4329 5084 3.274288 CTCTGTCAGGAAGGCCAATAAC 58.726 50.000 5.01 0.00 36.29 1.89
4330 5085 2.642311 TCTGTCAGGAAGGCCAATAACA 59.358 45.455 5.01 0.17 36.29 2.41
4331 5086 3.266772 TCTGTCAGGAAGGCCAATAACAT 59.733 43.478 5.01 0.00 36.29 2.71
4332 5087 4.019174 CTGTCAGGAAGGCCAATAACATT 58.981 43.478 5.01 0.00 36.29 2.71
4333 5088 4.016444 TGTCAGGAAGGCCAATAACATTC 58.984 43.478 5.01 0.00 36.29 2.67
4334 5089 3.381590 GTCAGGAAGGCCAATAACATTCC 59.618 47.826 5.01 7.63 39.80 3.01
4335 5090 3.011144 TCAGGAAGGCCAATAACATTCCA 59.989 43.478 17.32 0.00 41.56 3.53
4336 5091 3.382546 CAGGAAGGCCAATAACATTCCAG 59.617 47.826 17.32 7.81 41.56 3.86
4337 5092 2.101415 GGAAGGCCAATAACATTCCAGC 59.899 50.000 5.01 0.00 39.39 4.85
4338 5093 2.530460 AGGCCAATAACATTCCAGCA 57.470 45.000 5.01 0.00 0.00 4.41
4339 5094 2.818921 AGGCCAATAACATTCCAGCAA 58.181 42.857 5.01 0.00 0.00 3.91
4340 5095 2.497273 AGGCCAATAACATTCCAGCAAC 59.503 45.455 5.01 0.00 0.00 4.17
4341 5096 2.233431 GGCCAATAACATTCCAGCAACA 59.767 45.455 0.00 0.00 0.00 3.33
4342 5097 3.306641 GGCCAATAACATTCCAGCAACAA 60.307 43.478 0.00 0.00 0.00 2.83
4343 5098 4.314121 GCCAATAACATTCCAGCAACAAA 58.686 39.130 0.00 0.00 0.00 2.83
4344 5099 4.754114 GCCAATAACATTCCAGCAACAAAA 59.246 37.500 0.00 0.00 0.00 2.44
4345 5100 5.238214 GCCAATAACATTCCAGCAACAAAAA 59.762 36.000 0.00 0.00 0.00 1.94
4384 5139 3.928992 ACAGATATGATAATGCCGAAGCG 59.071 43.478 0.00 0.00 44.31 4.68
4416 5171 4.370049 TGCACAAATGTCACCATTTTCTG 58.630 39.130 0.00 0.00 46.61 3.02
4462 5218 4.641989 GCTAAATCAGGCCTCAGAAATCAA 59.358 41.667 0.00 0.00 0.00 2.57
4475 5231 7.275123 GCCTCAGAAATCAAAGCATAGAAAAAG 59.725 37.037 0.00 0.00 0.00 2.27
4481 5237 2.215942 AAGCATAGAAAAAGGCGGGT 57.784 45.000 0.00 0.00 0.00 5.28
4493 5249 6.270231 AGAAAAAGGCGGGTCTACATATAGAT 59.730 38.462 0.00 0.00 39.66 1.98
4522 5278 8.401490 AGATTAAGCCTGGAATATTTGACATC 57.599 34.615 0.00 0.00 0.00 3.06
4523 5279 6.959639 TTAAGCCTGGAATATTTGACATCC 57.040 37.500 0.00 0.00 0.00 3.51
4524 5280 4.803329 AGCCTGGAATATTTGACATCCT 57.197 40.909 0.00 0.00 33.02 3.24
4525 5281 5.912149 AGCCTGGAATATTTGACATCCTA 57.088 39.130 0.00 0.00 33.02 2.94
4526 5282 6.460103 AGCCTGGAATATTTGACATCCTAT 57.540 37.500 0.00 0.00 33.02 2.57
4527 5283 6.856757 AGCCTGGAATATTTGACATCCTATT 58.143 36.000 0.00 0.00 33.02 1.73
4528 5284 6.718454 AGCCTGGAATATTTGACATCCTATTG 59.282 38.462 0.00 0.00 33.02 1.90
4529 5285 6.716628 GCCTGGAATATTTGACATCCTATTGA 59.283 38.462 0.00 0.00 33.02 2.57
4530 5286 7.395489 GCCTGGAATATTTGACATCCTATTGAT 59.605 37.037 0.00 0.00 33.02 2.57
4531 5287 9.964354 CCTGGAATATTTGACATCCTATTGATA 57.036 33.333 0.00 0.00 33.02 2.15
4541 5297 9.571816 TTGACATCCTATTGATATATTTGCACA 57.428 29.630 0.00 0.00 30.56 4.57
4542 5298 9.743581 TGACATCCTATTGATATATTTGCACAT 57.256 29.630 0.00 0.00 30.56 3.21
4584 5340 8.483743 TTCGACAAAAGAAACGAAATAACATC 57.516 30.769 0.00 0.00 40.76 3.06
4645 5403 6.653526 ACATTTCATCAAACCAACAGATCA 57.346 33.333 0.00 0.00 0.00 2.92
4651 5409 5.947566 TCATCAAACCAACAGATCATGTGAT 59.052 36.000 0.00 0.00 43.00 3.06
4682 5440 5.940470 AGGAATAACACTCGCAAAAATCTCT 59.060 36.000 0.00 0.00 0.00 3.10
4686 5444 4.133856 ACACTCGCAAAAATCTCTTTCG 57.866 40.909 0.00 0.00 0.00 3.46
4698 5456 8.971321 CAAAAATCTCTTTCGATGTTGATTGTT 58.029 29.630 0.00 0.00 0.00 2.83
4703 5461 6.371271 TCTCTTTCGATGTTGATTGTTATGCA 59.629 34.615 0.00 0.00 0.00 3.96
4725 5483 9.754382 ATGCAATTTAAATGTATCCATGAACTC 57.246 29.630 0.39 0.00 0.00 3.01
4726 5484 8.747471 TGCAATTTAAATGTATCCATGAACTCA 58.253 29.630 0.39 0.00 0.00 3.41
4727 5485 9.585099 GCAATTTAAATGTATCCATGAACTCAA 57.415 29.630 0.39 0.00 0.00 3.02
4730 5488 9.699410 ATTTAAATGTATCCATGAACTCAAGGA 57.301 29.630 6.16 6.16 46.23 3.36
4731 5489 8.506168 TTAAATGTATCCATGAACTCAAGGAC 57.494 34.615 5.84 0.00 45.18 3.85
4732 5490 4.487714 TGTATCCATGAACTCAAGGACC 57.512 45.455 5.84 1.65 45.18 4.46
4733 5491 3.843619 TGTATCCATGAACTCAAGGACCA 59.156 43.478 5.84 3.99 45.18 4.02
4734 5492 4.474651 TGTATCCATGAACTCAAGGACCAT 59.525 41.667 5.84 0.00 45.18 3.55
4735 5493 3.634397 TCCATGAACTCAAGGACCATC 57.366 47.619 0.00 0.00 38.65 3.51
4736 5494 3.184628 TCCATGAACTCAAGGACCATCT 58.815 45.455 0.00 0.00 38.65 2.90
4737 5495 3.588842 TCCATGAACTCAAGGACCATCTT 59.411 43.478 0.00 0.00 38.65 2.40
4738 5496 3.693085 CCATGAACTCAAGGACCATCTTG 59.307 47.826 0.00 0.00 43.91 3.02
4739 5497 4.330250 CATGAACTCAAGGACCATCTTGT 58.670 43.478 0.00 0.00 43.25 3.16
4740 5498 5.491070 CATGAACTCAAGGACCATCTTGTA 58.509 41.667 0.00 0.00 43.25 2.41
4741 5499 5.762179 TGAACTCAAGGACCATCTTGTAT 57.238 39.130 0.00 0.00 43.25 2.29
4742 5500 5.491070 TGAACTCAAGGACCATCTTGTATG 58.509 41.667 0.00 0.00 43.25 2.39
4743 5501 3.878778 ACTCAAGGACCATCTTGTATGC 58.121 45.455 0.00 0.00 43.25 3.14
4744 5502 3.264193 ACTCAAGGACCATCTTGTATGCA 59.736 43.478 0.00 0.00 43.25 3.96
4745 5503 3.609853 TCAAGGACCATCTTGTATGCAC 58.390 45.455 0.00 0.00 43.25 4.57
4746 5504 3.264193 TCAAGGACCATCTTGTATGCACT 59.736 43.478 0.00 0.00 43.25 4.40
4747 5505 3.272574 AGGACCATCTTGTATGCACTG 57.727 47.619 0.00 0.00 0.00 3.66
4748 5506 2.573462 AGGACCATCTTGTATGCACTGT 59.427 45.455 0.00 0.00 0.00 3.55
4749 5507 3.774766 AGGACCATCTTGTATGCACTGTA 59.225 43.478 0.00 0.00 0.00 2.74
4750 5508 4.225042 AGGACCATCTTGTATGCACTGTAA 59.775 41.667 0.00 0.00 0.00 2.41
4751 5509 5.104360 AGGACCATCTTGTATGCACTGTAAT 60.104 40.000 0.00 0.00 0.00 1.89
4752 5510 5.237344 GGACCATCTTGTATGCACTGTAATC 59.763 44.000 0.00 0.00 0.00 1.75
4753 5511 5.994250 ACCATCTTGTATGCACTGTAATCT 58.006 37.500 0.00 0.00 0.00 2.40
4754 5512 6.051717 ACCATCTTGTATGCACTGTAATCTC 58.948 40.000 0.00 0.00 0.00 2.75
4755 5513 5.468072 CCATCTTGTATGCACTGTAATCTCC 59.532 44.000 0.00 0.00 0.00 3.71
4756 5514 4.682787 TCTTGTATGCACTGTAATCTCCG 58.317 43.478 0.00 0.00 0.00 4.63
4757 5515 4.401202 TCTTGTATGCACTGTAATCTCCGA 59.599 41.667 0.00 0.00 0.00 4.55
4758 5516 4.937201 TGTATGCACTGTAATCTCCGAT 57.063 40.909 0.00 0.00 0.00 4.18
4759 5517 6.264518 TCTTGTATGCACTGTAATCTCCGATA 59.735 38.462 0.00 0.00 0.00 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.465460 GCTGTGAACCTCACCACCAA 60.465 55.000 4.42 0.00 46.40 3.67
2 3 1.148273 GCTGTGAACCTCACCACCA 59.852 57.895 4.42 0.00 46.40 4.17
3 4 1.600916 GGCTGTGAACCTCACCACC 60.601 63.158 4.42 2.51 46.40 4.61
4 5 0.465460 TTGGCTGTGAACCTCACCAC 60.465 55.000 4.42 0.00 46.40 4.16
5 6 0.478072 ATTGGCTGTGAACCTCACCA 59.522 50.000 4.42 0.00 46.40 4.17
6 7 0.883833 CATTGGCTGTGAACCTCACC 59.116 55.000 4.42 0.00 46.40 4.02
8 9 0.770499 TCCATTGGCTGTGAACCTCA 59.230 50.000 0.00 0.00 0.00 3.86
9 10 1.457346 CTCCATTGGCTGTGAACCTC 58.543 55.000 0.00 0.00 0.00 3.85
10 11 0.038744 CCTCCATTGGCTGTGAACCT 59.961 55.000 0.00 0.00 0.00 3.50
11 12 0.251341 ACCTCCATTGGCTGTGAACC 60.251 55.000 0.00 0.00 0.00 3.62
12 13 0.883833 CACCTCCATTGGCTGTGAAC 59.116 55.000 15.43 0.00 0.00 3.18
13 14 0.770499 TCACCTCCATTGGCTGTGAA 59.230 50.000 18.90 7.89 32.79 3.18
14 15 0.994247 ATCACCTCCATTGGCTGTGA 59.006 50.000 21.69 21.69 37.35 3.58
15 16 1.843368 AATCACCTCCATTGGCTGTG 58.157 50.000 14.72 14.72 0.00 3.66
16 17 3.959495 ATAATCACCTCCATTGGCTGT 57.041 42.857 0.00 0.00 0.00 4.40
17 18 4.217118 GCTAATAATCACCTCCATTGGCTG 59.783 45.833 0.00 0.00 33.56 4.85
18 19 4.105377 AGCTAATAATCACCTCCATTGGCT 59.895 41.667 0.00 0.00 39.48 4.75
19 20 4.401925 AGCTAATAATCACCTCCATTGGC 58.598 43.478 0.00 0.00 35.73 4.52
20 21 6.966534 AAAGCTAATAATCACCTCCATTGG 57.033 37.500 0.00 0.00 0.00 3.16
21 22 8.908786 TCTAAAGCTAATAATCACCTCCATTG 57.091 34.615 0.00 0.00 0.00 2.82
22 23 8.718656 ACTCTAAAGCTAATAATCACCTCCATT 58.281 33.333 0.00 0.00 0.00 3.16
23 24 8.268878 ACTCTAAAGCTAATAATCACCTCCAT 57.731 34.615 0.00 0.00 0.00 3.41
36 37 7.312415 ACTCCCTTACAAACTCTAAAGCTAA 57.688 36.000 0.00 0.00 0.00 3.09
104 105 2.339418 TCACCCAAACTACAATACGCG 58.661 47.619 3.53 3.53 0.00 6.01
105 106 5.583457 AGTTATCACCCAAACTACAATACGC 59.417 40.000 0.00 0.00 34.23 4.42
107 108 9.530633 CTCTAGTTATCACCCAAACTACAATAC 57.469 37.037 0.00 0.00 37.19 1.89
112 113 7.066284 TCGTACTCTAGTTATCACCCAAACTAC 59.934 40.741 0.00 0.00 37.19 2.73
113 114 7.066284 GTCGTACTCTAGTTATCACCCAAACTA 59.934 40.741 0.00 0.00 37.19 2.24
114 115 5.948162 TCGTACTCTAGTTATCACCCAAACT 59.052 40.000 0.00 0.00 39.25 2.66
115 116 6.032717 GTCGTACTCTAGTTATCACCCAAAC 58.967 44.000 0.00 0.00 0.00 2.93
116 117 5.163723 CGTCGTACTCTAGTTATCACCCAAA 60.164 44.000 0.00 0.00 0.00 3.28
121 125 4.745929 CGTCGTCGTACTCTAGTTATCAC 58.254 47.826 0.00 0.00 0.00 3.06
137 141 1.792006 AAGGAAATGGTCACGTCGTC 58.208 50.000 0.00 0.00 0.00 4.20
189 194 9.613428 TTCGATCATGTATTTCTTTAATGGTCT 57.387 29.630 0.00 0.00 0.00 3.85
231 236 6.052360 TCTGTGCAAGTTCAGTTATTACACA 58.948 36.000 0.00 0.00 34.62 3.72
234 239 6.204882 ACCTTCTGTGCAAGTTCAGTTATTAC 59.795 38.462 0.00 0.00 33.89 1.89
235 240 6.296026 ACCTTCTGTGCAAGTTCAGTTATTA 58.704 36.000 0.00 0.00 33.89 0.98
236 241 5.133221 ACCTTCTGTGCAAGTTCAGTTATT 58.867 37.500 0.00 0.00 33.89 1.40
283 288 3.643320 AGTGACTTCAGTGAGTGGAATCA 59.357 43.478 0.00 0.00 0.00 2.57
284 289 4.264460 AGTGACTTCAGTGAGTGGAATC 57.736 45.455 0.00 0.00 0.00 2.52
294 299 3.643320 TGACCTTCATCAGTGACTTCAGT 59.357 43.478 0.00 0.00 33.11 3.41
297 302 3.244215 TGGTGACCTTCATCAGTGACTTC 60.244 47.826 2.11 0.00 31.53 3.01
299 304 2.329267 TGGTGACCTTCATCAGTGACT 58.671 47.619 2.11 0.00 31.53 3.41
300 305 2.839486 TGGTGACCTTCATCAGTGAC 57.161 50.000 2.11 0.00 31.53 3.67
302 307 6.764308 AAATAATGGTGACCTTCATCAGTG 57.236 37.500 2.11 0.00 41.35 3.66
304 309 8.059798 AGAAAAATAATGGTGACCTTCATCAG 57.940 34.615 2.11 0.00 41.35 2.90
305 310 8.421249 AAGAAAAATAATGGTGACCTTCATCA 57.579 30.769 2.11 0.00 42.38 3.07
306 311 7.698130 CGAAGAAAAATAATGGTGACCTTCATC 59.302 37.037 2.11 0.00 0.00 2.92
307 312 7.176690 ACGAAGAAAAATAATGGTGACCTTCAT 59.823 33.333 2.11 0.00 0.00 2.57
310 315 6.894339 ACGAAGAAAAATAATGGTGACCTT 57.106 33.333 2.11 0.00 0.00 3.50
311 316 6.894339 AACGAAGAAAAATAATGGTGACCT 57.106 33.333 2.11 0.00 0.00 3.85
312 317 7.436970 ACAAAACGAAGAAAAATAATGGTGACC 59.563 33.333 0.00 0.00 0.00 4.02
314 319 9.672086 CTACAAAACGAAGAAAAATAATGGTGA 57.328 29.630 0.00 0.00 0.00 4.02
316 321 9.458374 CACTACAAAACGAAGAAAAATAATGGT 57.542 29.630 0.00 0.00 0.00 3.55
317 322 8.911662 CCACTACAAAACGAAGAAAAATAATGG 58.088 33.333 0.00 0.00 0.00 3.16
318 323 9.672086 TCCACTACAAAACGAAGAAAAATAATG 57.328 29.630 0.00 0.00 0.00 1.90
320 325 9.672086 CATCCACTACAAAACGAAGAAAAATAA 57.328 29.630 0.00 0.00 0.00 1.40
321 326 8.293867 CCATCCACTACAAAACGAAGAAAAATA 58.706 33.333 0.00 0.00 0.00 1.40
322 327 7.013846 TCCATCCACTACAAAACGAAGAAAAAT 59.986 33.333 0.00 0.00 0.00 1.82
323 328 6.319152 TCCATCCACTACAAAACGAAGAAAAA 59.681 34.615 0.00 0.00 0.00 1.94
324 329 5.823570 TCCATCCACTACAAAACGAAGAAAA 59.176 36.000 0.00 0.00 0.00 2.29
325 330 5.369833 TCCATCCACTACAAAACGAAGAAA 58.630 37.500 0.00 0.00 0.00 2.52
326 331 4.963373 TCCATCCACTACAAAACGAAGAA 58.037 39.130 0.00 0.00 0.00 2.52
327 332 4.039973 ACTCCATCCACTACAAAACGAAGA 59.960 41.667 0.00 0.00 0.00 2.87
328 333 4.152402 CACTCCATCCACTACAAAACGAAG 59.848 45.833 0.00 0.00 0.00 3.79
329 334 4.062293 CACTCCATCCACTACAAAACGAA 58.938 43.478 0.00 0.00 0.00 3.85
330 335 3.556213 CCACTCCATCCACTACAAAACGA 60.556 47.826 0.00 0.00 0.00 3.85
331 336 2.742053 CCACTCCATCCACTACAAAACG 59.258 50.000 0.00 0.00 0.00 3.60
332 337 2.488153 GCCACTCCATCCACTACAAAAC 59.512 50.000 0.00 0.00 0.00 2.43
333 338 2.375174 AGCCACTCCATCCACTACAAAA 59.625 45.455 0.00 0.00 0.00 2.44
334 339 1.985159 AGCCACTCCATCCACTACAAA 59.015 47.619 0.00 0.00 0.00 2.83
335 340 1.656587 AGCCACTCCATCCACTACAA 58.343 50.000 0.00 0.00 0.00 2.41
336 341 1.656587 AAGCCACTCCATCCACTACA 58.343 50.000 0.00 0.00 0.00 2.74
337 342 2.789409 AAAGCCACTCCATCCACTAC 57.211 50.000 0.00 0.00 0.00 2.73
338 343 6.558775 AGATAATAAAGCCACTCCATCCACTA 59.441 38.462 0.00 0.00 0.00 2.74
339 344 5.370880 AGATAATAAAGCCACTCCATCCACT 59.629 40.000 0.00 0.00 0.00 4.00
340 345 5.625150 AGATAATAAAGCCACTCCATCCAC 58.375 41.667 0.00 0.00 0.00 4.02
341 346 5.912149 AGATAATAAAGCCACTCCATCCA 57.088 39.130 0.00 0.00 0.00 3.41
342 347 5.707764 GGAAGATAATAAAGCCACTCCATCC 59.292 44.000 0.00 0.00 0.00 3.51
343 348 5.707764 GGGAAGATAATAAAGCCACTCCATC 59.292 44.000 0.00 0.00 0.00 3.51
344 349 5.134339 TGGGAAGATAATAAAGCCACTCCAT 59.866 40.000 0.00 0.00 0.00 3.41
345 350 4.476846 TGGGAAGATAATAAAGCCACTCCA 59.523 41.667 0.00 0.00 0.00 3.86
346 351 5.048846 TGGGAAGATAATAAAGCCACTCC 57.951 43.478 0.00 0.00 0.00 3.85
347 352 5.009110 GCTTGGGAAGATAATAAAGCCACTC 59.991 44.000 0.00 0.00 35.19 3.51
348 353 4.889995 GCTTGGGAAGATAATAAAGCCACT 59.110 41.667 0.00 0.00 35.19 4.00
349 354 4.889995 AGCTTGGGAAGATAATAAAGCCAC 59.110 41.667 0.00 0.00 40.64 5.01
350 355 5.129368 AGCTTGGGAAGATAATAAAGCCA 57.871 39.130 0.00 0.00 40.64 4.75
351 356 6.942576 TGATAGCTTGGGAAGATAATAAAGCC 59.057 38.462 0.00 0.00 40.64 4.35
352 357 7.663493 ACTGATAGCTTGGGAAGATAATAAAGC 59.337 37.037 0.00 0.00 40.18 3.51
353 358 9.566432 AACTGATAGCTTGGGAAGATAATAAAG 57.434 33.333 0.00 0.00 32.48 1.85
354 359 9.342308 CAACTGATAGCTTGGGAAGATAATAAA 57.658 33.333 0.00 0.00 32.48 1.40
355 360 8.494433 ACAACTGATAGCTTGGGAAGATAATAA 58.506 33.333 0.00 0.00 32.48 1.40
356 361 8.034313 ACAACTGATAGCTTGGGAAGATAATA 57.966 34.615 0.00 0.00 32.48 0.98
357 362 6.904626 ACAACTGATAGCTTGGGAAGATAAT 58.095 36.000 0.00 0.00 32.48 1.28
358 363 6.070251 TGACAACTGATAGCTTGGGAAGATAA 60.070 38.462 0.00 0.00 32.48 1.75
359 364 5.425217 TGACAACTGATAGCTTGGGAAGATA 59.575 40.000 0.00 0.00 33.38 1.98
360 365 4.225942 TGACAACTGATAGCTTGGGAAGAT 59.774 41.667 0.00 0.00 0.00 2.40
361 366 3.582647 TGACAACTGATAGCTTGGGAAGA 59.417 43.478 0.00 0.00 0.00 2.87
362 367 3.942829 TGACAACTGATAGCTTGGGAAG 58.057 45.455 0.00 0.00 0.00 3.46
363 368 4.574674 ATGACAACTGATAGCTTGGGAA 57.425 40.909 0.00 0.00 0.00 3.97
364 369 4.263462 ACAATGACAACTGATAGCTTGGGA 60.263 41.667 0.00 0.00 0.00 4.37
365 370 4.012374 ACAATGACAACTGATAGCTTGGG 58.988 43.478 0.00 0.00 0.00 4.12
366 371 4.095483 GGACAATGACAACTGATAGCTTGG 59.905 45.833 0.00 0.00 0.00 3.61
367 372 4.940046 AGGACAATGACAACTGATAGCTTG 59.060 41.667 0.00 0.00 0.00 4.01
368 373 5.171339 AGGACAATGACAACTGATAGCTT 57.829 39.130 0.00 0.00 0.00 3.74
369 374 4.833478 AGGACAATGACAACTGATAGCT 57.167 40.909 0.00 0.00 0.00 3.32
370 375 5.886960 AAAGGACAATGACAACTGATAGC 57.113 39.130 0.00 0.00 0.00 2.97
391 396 4.724303 TGCGTGTTCGAAAAGAAGAAAAA 58.276 34.783 0.00 0.00 39.95 1.94
392 397 4.343811 TGCGTGTTCGAAAAGAAGAAAA 57.656 36.364 0.00 0.00 39.95 2.29
393 398 4.272504 AGATGCGTGTTCGAAAAGAAGAAA 59.727 37.500 0.00 0.00 39.95 2.52
394 399 3.807622 AGATGCGTGTTCGAAAAGAAGAA 59.192 39.130 0.00 0.00 39.95 2.52
395 400 3.390135 AGATGCGTGTTCGAAAAGAAGA 58.610 40.909 0.00 0.00 39.95 2.87
396 401 3.795561 AGATGCGTGTTCGAAAAGAAG 57.204 42.857 0.00 0.00 39.95 2.85
397 402 5.660629 TTTAGATGCGTGTTCGAAAAGAA 57.339 34.783 0.00 0.00 39.71 2.52
398 403 5.617609 CATTTAGATGCGTGTTCGAAAAGA 58.382 37.500 0.00 0.00 39.71 2.52
399 404 5.898159 CATTTAGATGCGTGTTCGAAAAG 57.102 39.130 0.00 0.00 39.71 2.27
412 417 3.787634 GCACAATGACACGCATTTAGATG 59.212 43.478 0.00 0.00 44.68 2.90
413 418 3.439825 TGCACAATGACACGCATTTAGAT 59.560 39.130 0.00 0.00 44.68 1.98
414 419 2.810852 TGCACAATGACACGCATTTAGA 59.189 40.909 0.00 0.00 44.68 2.10
415 420 3.200294 TGCACAATGACACGCATTTAG 57.800 42.857 0.00 0.00 44.68 1.85
416 421 3.846423 ATGCACAATGACACGCATTTA 57.154 38.095 0.00 0.00 44.68 1.40
417 422 2.728690 ATGCACAATGACACGCATTT 57.271 40.000 0.00 0.00 44.68 2.32
419 424 3.009026 TCTAATGCACAATGACACGCAT 58.991 40.909 0.00 0.00 46.66 4.73
420 425 2.421619 TCTAATGCACAATGACACGCA 58.578 42.857 0.00 0.00 39.01 5.24
421 426 3.125146 TCTTCTAATGCACAATGACACGC 59.875 43.478 0.00 0.00 0.00 5.34
422 427 4.926860 TCTTCTAATGCACAATGACACG 57.073 40.909 0.00 0.00 0.00 4.49
423 428 5.853282 GTGTTCTTCTAATGCACAATGACAC 59.147 40.000 0.00 0.00 0.00 3.67
424 429 5.048782 GGTGTTCTTCTAATGCACAATGACA 60.049 40.000 0.00 0.00 0.00 3.58
425 430 5.048782 TGGTGTTCTTCTAATGCACAATGAC 60.049 40.000 0.00 0.00 0.00 3.06
426 431 5.069318 TGGTGTTCTTCTAATGCACAATGA 58.931 37.500 0.00 0.00 0.00 2.57
427 432 5.181811 TCTGGTGTTCTTCTAATGCACAATG 59.818 40.000 0.00 0.00 0.00 2.82
428 433 5.316167 TCTGGTGTTCTTCTAATGCACAAT 58.684 37.500 0.00 0.00 0.00 2.71
429 434 4.713553 TCTGGTGTTCTTCTAATGCACAA 58.286 39.130 0.00 0.00 0.00 3.33
430 435 4.040339 TCTCTGGTGTTCTTCTAATGCACA 59.960 41.667 0.00 0.00 0.00 4.57
431 436 4.569943 TCTCTGGTGTTCTTCTAATGCAC 58.430 43.478 0.00 0.00 0.00 4.57
432 437 4.890158 TCTCTGGTGTTCTTCTAATGCA 57.110 40.909 0.00 0.00 0.00 3.96
433 438 4.633565 CCTTCTCTGGTGTTCTTCTAATGC 59.366 45.833 0.00 0.00 0.00 3.56
434 439 4.633565 GCCTTCTCTGGTGTTCTTCTAATG 59.366 45.833 0.00 0.00 0.00 1.90
435 440 4.287067 TGCCTTCTCTGGTGTTCTTCTAAT 59.713 41.667 0.00 0.00 0.00 1.73
436 441 3.646162 TGCCTTCTCTGGTGTTCTTCTAA 59.354 43.478 0.00 0.00 0.00 2.10
437 442 3.239449 TGCCTTCTCTGGTGTTCTTCTA 58.761 45.455 0.00 0.00 0.00 2.10
438 443 2.038295 CTGCCTTCTCTGGTGTTCTTCT 59.962 50.000 0.00 0.00 0.00 2.85
439 444 2.037772 TCTGCCTTCTCTGGTGTTCTTC 59.962 50.000 0.00 0.00 0.00 2.87
440 445 2.038295 CTCTGCCTTCTCTGGTGTTCTT 59.962 50.000 0.00 0.00 0.00 2.52
441 446 1.622811 CTCTGCCTTCTCTGGTGTTCT 59.377 52.381 0.00 0.00 0.00 3.01
442 447 1.620819 TCTCTGCCTTCTCTGGTGTTC 59.379 52.381 0.00 0.00 0.00 3.18
443 448 1.622811 CTCTCTGCCTTCTCTGGTGTT 59.377 52.381 0.00 0.00 0.00 3.32
444 449 1.265236 CTCTCTGCCTTCTCTGGTGT 58.735 55.000 0.00 0.00 0.00 4.16
445 450 1.265236 ACTCTCTGCCTTCTCTGGTG 58.735 55.000 0.00 0.00 0.00 4.17
446 451 2.225142 TGTACTCTCTGCCTTCTCTGGT 60.225 50.000 0.00 0.00 0.00 4.00
447 452 2.451490 TGTACTCTCTGCCTTCTCTGG 58.549 52.381 0.00 0.00 0.00 3.86
448 453 3.119173 CCTTGTACTCTCTGCCTTCTCTG 60.119 52.174 0.00 0.00 0.00 3.35
449 454 3.096092 CCTTGTACTCTCTGCCTTCTCT 58.904 50.000 0.00 0.00 0.00 3.10
450 455 2.418060 GCCTTGTACTCTCTGCCTTCTC 60.418 54.545 0.00 0.00 0.00 2.87
451 456 1.552792 GCCTTGTACTCTCTGCCTTCT 59.447 52.381 0.00 0.00 0.00 2.85
452 457 1.276421 TGCCTTGTACTCTCTGCCTTC 59.724 52.381 0.00 0.00 0.00 3.46
453 458 1.002544 GTGCCTTGTACTCTCTGCCTT 59.997 52.381 0.00 0.00 0.00 4.35
454 459 0.610687 GTGCCTTGTACTCTCTGCCT 59.389 55.000 0.00 0.00 0.00 4.75
455 460 0.391793 GGTGCCTTGTACTCTCTGCC 60.392 60.000 0.00 0.00 0.00 4.85
456 461 0.610687 AGGTGCCTTGTACTCTCTGC 59.389 55.000 0.00 0.00 0.00 4.26
457 462 3.181471 CCATAGGTGCCTTGTACTCTCTG 60.181 52.174 0.00 0.00 0.00 3.35
458 463 3.034635 CCATAGGTGCCTTGTACTCTCT 58.965 50.000 0.00 0.00 0.00 3.10
459 464 2.766828 ACCATAGGTGCCTTGTACTCTC 59.233 50.000 0.00 0.00 32.98 3.20
460 465 2.834113 ACCATAGGTGCCTTGTACTCT 58.166 47.619 0.00 0.00 32.98 3.24
476 481 4.657814 AGGACAATTACAACTCCACCAT 57.342 40.909 0.00 0.00 0.00 3.55
507 605 8.202461 TCTCCTTTTTGGTATCTTTCTCAGTA 57.798 34.615 0.00 0.00 37.07 2.74
523 621 5.767816 ACGTGTATTTTGCTCTCCTTTTT 57.232 34.783 0.00 0.00 0.00 1.94
528 626 4.453136 TGGTTAACGTGTATTTTGCTCTCC 59.547 41.667 0.00 0.00 0.00 3.71
529 627 5.049954 TGTGGTTAACGTGTATTTTGCTCTC 60.050 40.000 0.00 0.00 0.00 3.20
534 632 6.361214 GTGGATTGTGGTTAACGTGTATTTTG 59.639 38.462 0.00 0.00 0.00 2.44
535 633 6.440436 GTGGATTGTGGTTAACGTGTATTTT 58.560 36.000 0.00 0.00 0.00 1.82
536 634 5.048573 GGTGGATTGTGGTTAACGTGTATTT 60.049 40.000 0.00 0.00 0.00 1.40
539 637 3.401182 GGTGGATTGTGGTTAACGTGTA 58.599 45.455 0.00 0.00 0.00 2.90
541 639 1.195900 CGGTGGATTGTGGTTAACGTG 59.804 52.381 0.00 0.00 0.00 4.49
544 642 2.081462 CTCCGGTGGATTGTGGTTAAC 58.919 52.381 0.00 0.00 0.00 2.01
545 643 1.979308 TCTCCGGTGGATTGTGGTTAA 59.021 47.619 0.00 0.00 0.00 2.01
546 644 1.646912 TCTCCGGTGGATTGTGGTTA 58.353 50.000 0.00 0.00 0.00 2.85
547 645 0.768622 TTCTCCGGTGGATTGTGGTT 59.231 50.000 0.00 0.00 0.00 3.67
548 646 0.036306 GTTCTCCGGTGGATTGTGGT 59.964 55.000 0.00 0.00 0.00 4.16
549 647 0.676782 GGTTCTCCGGTGGATTGTGG 60.677 60.000 0.00 0.00 0.00 4.17
550 648 0.036164 TGGTTCTCCGGTGGATTGTG 59.964 55.000 0.00 0.00 36.30 3.33
551 649 0.991920 ATGGTTCTCCGGTGGATTGT 59.008 50.000 0.00 0.00 36.30 2.71
552 650 1.382522 CATGGTTCTCCGGTGGATTG 58.617 55.000 0.00 0.00 36.30 2.67
553 651 0.255890 CCATGGTTCTCCGGTGGATT 59.744 55.000 2.57 0.00 41.59 3.01
554 652 1.915228 CCATGGTTCTCCGGTGGAT 59.085 57.895 2.57 0.00 41.59 3.41
555 653 2.966732 GCCATGGTTCTCCGGTGGA 61.967 63.158 14.67 2.66 41.59 4.02
556 654 2.438434 GCCATGGTTCTCCGGTGG 60.438 66.667 14.67 0.00 41.81 4.61
557 655 2.819595 CGCCATGGTTCTCCGGTG 60.820 66.667 14.67 0.00 36.30 4.94
558 656 3.000819 TCGCCATGGTTCTCCGGT 61.001 61.111 14.67 0.00 36.30 5.28
559 657 1.672854 TAGTCGCCATGGTTCTCCGG 61.673 60.000 14.67 0.00 36.30 5.14
560 658 0.174845 TTAGTCGCCATGGTTCTCCG 59.825 55.000 14.67 8.04 36.30 4.63
561 659 1.653151 GTTAGTCGCCATGGTTCTCC 58.347 55.000 14.67 0.00 0.00 3.71
562 660 1.207329 AGGTTAGTCGCCATGGTTCTC 59.793 52.381 14.67 2.04 0.00 2.87
563 661 1.207329 GAGGTTAGTCGCCATGGTTCT 59.793 52.381 14.67 11.56 0.00 3.01
564 662 1.653151 GAGGTTAGTCGCCATGGTTC 58.347 55.000 14.67 4.26 0.00 3.62
565 663 0.252197 GGAGGTTAGTCGCCATGGTT 59.748 55.000 14.67 0.00 0.00 3.67
566 664 0.907704 TGGAGGTTAGTCGCCATGGT 60.908 55.000 14.67 0.00 0.00 3.55
567 665 0.179073 CTGGAGGTTAGTCGCCATGG 60.179 60.000 7.63 7.63 0.00 3.66
568 666 0.537188 ACTGGAGGTTAGTCGCCATG 59.463 55.000 0.00 0.00 0.00 3.66
569 667 0.537188 CACTGGAGGTTAGTCGCCAT 59.463 55.000 0.00 0.00 0.00 4.40
573 671 3.068165 TGCATATCACTGGAGGTTAGTCG 59.932 47.826 0.00 0.00 0.00 4.18
591 689 9.866655 TTTCCTATATTCCAGTAAATTCTGCAT 57.133 29.630 0.00 0.00 34.47 3.96
598 696 9.628500 GGTTCAGTTTCCTATATTCCAGTAAAT 57.372 33.333 0.00 0.00 0.00 1.40
610 709 2.025887 CCAGCAGGGTTCAGTTTCCTAT 60.026 50.000 0.00 0.00 0.00 2.57
633 732 1.066573 ACTGATCAGAAAGCACTCCCG 60.067 52.381 29.27 0.00 0.00 5.14
664 766 4.763073 TGTGGCAGATCAGTTTCTAGATG 58.237 43.478 0.00 0.00 0.00 2.90
745 847 5.144100 TGTTTCCAACATCAAATACCTGGT 58.856 37.500 4.05 4.05 36.25 4.00
746 848 5.720371 TGTTTCCAACATCAAATACCTGG 57.280 39.130 0.00 0.00 36.25 4.45
747 849 7.489113 GCTATTGTTTCCAACATCAAATACCTG 59.511 37.037 0.00 0.00 41.79 4.00
748 850 7.397192 AGCTATTGTTTCCAACATCAAATACCT 59.603 33.333 0.00 0.00 41.79 3.08
752 866 9.995003 TTTTAGCTATTGTTTCCAACATCAAAT 57.005 25.926 0.00 0.00 41.79 2.32
828 943 3.758300 AGCAACAAAAGAACAACACTCG 58.242 40.909 0.00 0.00 0.00 4.18
854 969 4.442733 CAGAAGCGCTTCTTGCTAGTATAC 59.557 45.833 42.29 17.81 46.95 1.47
901 1112 7.009540 GCCTGCAAAACACAGAATTATGATAAC 59.990 37.037 7.16 0.00 37.32 1.89
903 1114 6.377996 AGCCTGCAAAACACAGAATTATGATA 59.622 34.615 7.16 0.00 37.32 2.15
952 1180 6.365520 ACTTCCAGATAACAAAGGACAAACT 58.634 36.000 0.00 0.00 0.00 2.66
954 1182 7.514721 ACTACTTCCAGATAACAAAGGACAAA 58.485 34.615 0.00 0.00 0.00 2.83
1036 1267 0.662619 TTTGCAGAGTTTGAGCCACG 59.337 50.000 0.00 0.00 0.00 4.94
1055 1286 2.114616 TGGTCCAAAATGTTTGTGGCT 58.885 42.857 0.00 0.00 32.10 4.75
1123 1354 1.000385 CTGGCAGCGGACAAATTTCAA 60.000 47.619 0.00 0.00 0.00 2.69
1293 1524 7.291411 ACACTTATCTTTGTCACTGTAGAGT 57.709 36.000 0.00 0.00 0.00 3.24
1443 1674 2.299297 GGTGGAGACCCTATATGTTCCG 59.701 54.545 0.00 0.00 36.03 4.30
1478 1709 2.472115 TGTTTCGTGTCGGTGTAAATCG 59.528 45.455 0.00 0.00 0.00 3.34
1521 1752 7.118496 AGAGTTCCTTCTACCAGTGAATATG 57.882 40.000 0.00 0.00 0.00 1.78
1641 1872 5.723887 AGAGAGGACCTGAACAACTTCATAT 59.276 40.000 0.00 0.00 35.78 1.78
1686 1917 2.967362 ACAAGCGGAATGACAACGATA 58.033 42.857 0.00 0.00 0.00 2.92
1737 1968 1.903183 GGAGTGGCCTCTTTAGACTGT 59.097 52.381 9.08 0.00 37.86 3.55
1875 2106 2.305927 CTCTGCCAAGTTAAGGGGAAGA 59.694 50.000 0.00 0.00 35.07 2.87
1892 2123 2.037772 ACAACACAGGTAAGAGCCTCTG 59.962 50.000 0.00 0.00 36.58 3.35
1940 2175 5.412640 CAGCATATTTGGCATCAAACTTCA 58.587 37.500 0.00 0.00 44.53 3.02
2003 2238 1.142688 ATGTTGCCTCTCCCCAACCT 61.143 55.000 0.00 0.00 40.34 3.50
2028 2263 1.180029 AGATCCCTGCATTTGTGCAC 58.820 50.000 10.75 10.75 40.23 4.57
2034 2269 5.774690 TGTCTTTGTAAAGATCCCTGCATTT 59.225 36.000 9.98 0.00 45.83 2.32
2063 2298 0.534412 ATGTCCTCTGTTCTCAGCCG 59.466 55.000 0.00 0.00 41.10 5.52
2067 2302 4.220821 GGAGTGTTATGTCCTCTGTTCTCA 59.779 45.833 0.00 0.00 0.00 3.27
2078 2313 7.103641 TCCTACAGAAAATGGAGTGTTATGTC 58.896 38.462 0.00 0.00 38.32 3.06
2153 2388 7.042523 GGTCAAAGTTGAAAAATTCAGGACATG 60.043 37.037 0.00 0.00 41.38 3.21
2169 2404 2.943033 ACCTCGAAGTTGGTCAAAGTTG 59.057 45.455 0.00 0.00 31.28 3.16
2388 2623 2.293122 TGTTTCTGATTTTCCACGCCTG 59.707 45.455 0.00 0.00 0.00 4.85
2536 2771 0.895100 TGGTTGCCAGCATCTGAACC 60.895 55.000 9.30 9.30 38.23 3.62
2601 2836 3.951680 TGACGATGATGCTAGTTCCTGTA 59.048 43.478 0.00 0.00 0.00 2.74
2933 3452 0.459237 CGCATCTTGCTTCTCTCCGT 60.459 55.000 0.00 0.00 42.25 4.69
3002 3521 2.871022 GCAGATGGAGTGTTATGCTCTG 59.129 50.000 0.00 0.00 33.73 3.35
3057 3579 9.212641 CATTCATATTCTGTTCGGACAATATCT 57.787 33.333 0.00 0.00 34.85 1.98
3070 3592 5.928976 TGAATCCGGACATTCATATTCTGT 58.071 37.500 15.06 0.00 37.77 3.41
3137 3659 1.524482 GACCAGATCTGCCCAGGTC 59.476 63.158 17.76 14.54 41.59 3.85
3154 3676 5.880887 ACTTATCGATATCGCTGTAGATGGA 59.119 40.000 20.34 0.00 39.60 3.41
3412 3943 3.960002 GGCACGATTTCATATTCGTTTCG 59.040 43.478 0.00 0.00 45.62 3.46
3493 4024 5.583854 ACTGATAGTCACAGCTGCTAAAATG 59.416 40.000 15.27 3.19 38.74 2.32
3514 4049 3.209410 GGCAGAATATCTCCACCAACTG 58.791 50.000 0.00 0.00 0.00 3.16
3602 4137 1.343069 GGTCTCCACAGTTGTCTCCT 58.657 55.000 0.00 0.00 0.00 3.69
3925 4472 3.777465 TGCCAAGTCGCTAACTACTAG 57.223 47.619 0.00 0.00 37.17 2.57
4006 4553 6.457392 CGCGGTTACAGTAAACTACTATGAGA 60.457 42.308 6.79 0.00 37.23 3.27
4007 4554 5.680229 CGCGGTTACAGTAAACTACTATGAG 59.320 44.000 6.79 0.00 37.23 2.90
4008 4555 5.353956 TCGCGGTTACAGTAAACTACTATGA 59.646 40.000 6.13 0.00 37.23 2.15
4009 4556 5.572211 TCGCGGTTACAGTAAACTACTATG 58.428 41.667 6.13 0.00 37.23 2.23
4010 4557 5.818136 TCGCGGTTACAGTAAACTACTAT 57.182 39.130 6.13 0.00 37.23 2.12
4011 4558 5.391950 CCTTCGCGGTTACAGTAAACTACTA 60.392 44.000 6.13 0.00 37.23 1.82
4012 4559 4.479619 CTTCGCGGTTACAGTAAACTACT 58.520 43.478 6.13 0.00 40.28 2.57
4013 4560 3.609807 CCTTCGCGGTTACAGTAAACTAC 59.390 47.826 6.13 0.00 0.00 2.73
4105 4860 1.071471 GCCACAGTATCCCATCCCG 59.929 63.158 0.00 0.00 0.00 5.14
4155 4910 0.526211 GGTTGGGGCATCGAGAAAAC 59.474 55.000 0.00 0.00 0.00 2.43
4173 4928 2.401766 GGCACCACAGCTCGAATGG 61.402 63.158 2.68 3.23 39.57 3.16
4175 4930 0.674895 GAAGGCACCACAGCTCGAAT 60.675 55.000 0.00 0.00 34.17 3.34
4210 4965 2.686558 TCAACGATGAAAAGCTGTGC 57.313 45.000 0.00 0.00 30.99 4.57
4211 4966 4.214980 AGTTCAACGATGAAAAGCTGTG 57.785 40.909 9.90 0.00 46.66 3.66
4212 4967 5.057149 ACTAGTTCAACGATGAAAAGCTGT 58.943 37.500 9.90 2.98 46.66 4.40
4214 4969 7.148407 CCATTACTAGTTCAACGATGAAAAGCT 60.148 37.037 9.90 6.04 46.66 3.74
4215 4970 6.961554 CCATTACTAGTTCAACGATGAAAAGC 59.038 38.462 9.90 0.00 46.66 3.51
4216 4971 7.957484 CACCATTACTAGTTCAACGATGAAAAG 59.043 37.037 9.90 12.40 46.66 2.27
4220 4975 4.868171 GCACCATTACTAGTTCAACGATGA 59.132 41.667 0.00 0.00 0.00 2.92
4221 4976 4.629634 TGCACCATTACTAGTTCAACGATG 59.370 41.667 0.00 0.00 0.00 3.84
4223 4978 3.991773 GTGCACCATTACTAGTTCAACGA 59.008 43.478 5.22 0.00 0.00 3.85
4225 4980 4.154195 CAGGTGCACCATTACTAGTTCAAC 59.846 45.833 36.39 4.54 38.89 3.18
4227 4982 3.868369 GCAGGTGCACCATTACTAGTTCA 60.868 47.826 36.39 0.00 41.59 3.18
4229 4984 2.711542 GCAGGTGCACCATTACTAGTT 58.288 47.619 36.39 10.81 41.59 2.24
4230 4985 1.405526 CGCAGGTGCACCATTACTAGT 60.406 52.381 36.39 11.61 42.21 2.57
4232 4987 0.899019 TCGCAGGTGCACCATTACTA 59.101 50.000 36.39 14.45 42.21 1.82
4234 4989 0.378257 CATCGCAGGTGCACCATTAC 59.622 55.000 36.39 20.75 42.21 1.89
4236 4991 2.703798 GCATCGCAGGTGCACCATT 61.704 57.895 36.39 15.71 42.08 3.16
4237 4992 3.136123 GCATCGCAGGTGCACCAT 61.136 61.111 36.39 19.12 42.08 3.55
4238 4993 4.639906 TGCATCGCAGGTGCACCA 62.640 61.111 36.39 17.55 46.76 4.17
4242 4997 3.058160 AAGGTGCATCGCAGGTGC 61.058 61.111 6.82 6.82 40.08 5.01
4243 4998 0.673333 TACAAGGTGCATCGCAGGTG 60.673 55.000 0.00 0.00 40.08 4.00
4245 5000 1.369091 GGTACAAGGTGCATCGCAGG 61.369 60.000 0.00 0.00 40.08 4.85
4246 5001 0.673333 TGGTACAAGGTGCATCGCAG 60.673 55.000 0.00 0.00 34.82 5.18
4247 5002 1.373059 TGGTACAAGGTGCATCGCA 59.627 52.632 0.00 0.00 31.78 5.10
4248 5003 4.294523 TGGTACAAGGTGCATCGC 57.705 55.556 0.00 0.00 31.92 4.58
4257 5012 3.941483 CAGGCAGTATCCTTTGGTACAAG 59.059 47.826 0.00 0.00 37.82 3.16
4258 5013 3.585289 TCAGGCAGTATCCTTTGGTACAA 59.415 43.478 0.00 0.00 37.82 2.41
4259 5014 3.178046 TCAGGCAGTATCCTTTGGTACA 58.822 45.455 0.00 0.00 33.25 2.90
4260 5015 3.906720 TCAGGCAGTATCCTTTGGTAC 57.093 47.619 0.00 0.00 33.25 3.34
4262 5017 3.806949 TTTCAGGCAGTATCCTTTGGT 57.193 42.857 0.00 0.00 33.25 3.67
4263 5018 5.665916 AATTTTCAGGCAGTATCCTTTGG 57.334 39.130 0.00 0.00 33.25 3.28
4265 5020 7.451566 ACAGTAAATTTTCAGGCAGTATCCTTT 59.548 33.333 0.00 0.00 33.25 3.11
4266 5021 6.948309 ACAGTAAATTTTCAGGCAGTATCCTT 59.052 34.615 0.00 0.00 33.25 3.36
4267 5022 6.485171 ACAGTAAATTTTCAGGCAGTATCCT 58.515 36.000 0.00 0.00 36.78 3.24
4268 5023 6.759497 ACAGTAAATTTTCAGGCAGTATCC 57.241 37.500 0.00 0.00 0.00 2.59
4269 5024 7.593825 ACAACAGTAAATTTTCAGGCAGTATC 58.406 34.615 0.00 0.00 0.00 2.24
4270 5025 7.524717 ACAACAGTAAATTTTCAGGCAGTAT 57.475 32.000 0.00 0.00 0.00 2.12
4271 5026 6.952773 ACAACAGTAAATTTTCAGGCAGTA 57.047 33.333 0.00 0.00 0.00 2.74
4272 5027 5.852282 ACAACAGTAAATTTTCAGGCAGT 57.148 34.783 0.00 0.00 0.00 4.40
4273 5028 9.507280 CATATACAACAGTAAATTTTCAGGCAG 57.493 33.333 0.00 0.00 0.00 4.85
4274 5029 9.019656 ACATATACAACAGTAAATTTTCAGGCA 57.980 29.630 0.00 0.00 0.00 4.75
4275 5030 9.503427 GACATATACAACAGTAAATTTTCAGGC 57.497 33.333 0.00 0.00 0.00 4.85
4288 5043 8.948631 ACAGAGGTATTTGACATATACAACAG 57.051 34.615 15.24 9.11 31.53 3.16
4292 5047 7.563556 TCCTGACAGAGGTATTTGACATATACA 59.436 37.037 15.24 0.00 43.37 2.29
4293 5048 7.952671 TCCTGACAGAGGTATTTGACATATAC 58.047 38.462 3.32 7.34 43.37 1.47
4310 5065 3.071874 TGTTATTGGCCTTCCTGACAG 57.928 47.619 3.32 0.00 0.00 3.51
4322 5077 6.857777 TTTTTGTTGCTGGAATGTTATTGG 57.142 33.333 0.00 0.00 0.00 3.16
4353 5108 9.809096 CGGCATTATCATATCTGTTATTAGTCT 57.191 33.333 0.00 0.00 0.00 3.24
4354 5109 9.803315 TCGGCATTATCATATCTGTTATTAGTC 57.197 33.333 0.00 0.00 0.00 2.59
4375 5130 0.384309 ATCGAATAGACGCTTCGGCA 59.616 50.000 11.01 0.00 44.22 5.69
4378 5133 1.188138 GTGCATCGAATAGACGCTTCG 59.812 52.381 0.00 6.21 45.16 3.79
4384 5139 5.258622 GTGACATTTGTGCATCGAATAGAC 58.741 41.667 0.00 0.00 0.00 2.59
4433 5189 0.396278 AGGCCTGATTTAGCTTGGGC 60.396 55.000 3.11 0.00 42.68 5.36
4462 5218 2.092323 GACCCGCCTTTTTCTATGCTT 58.908 47.619 0.00 0.00 0.00 3.91
4475 5231 8.638629 ATCTATAATCTATATGTAGACCCGCC 57.361 38.462 0.71 0.00 39.66 6.13
4515 5271 9.571816 TGTGCAAATATATCAATAGGATGTCAA 57.428 29.630 0.00 0.00 36.72 3.18
4516 5272 9.743581 ATGTGCAAATATATCAATAGGATGTCA 57.256 29.630 0.00 0.00 36.72 3.58
4591 5347 8.052748 TGTAAATCTGGTGCTACATAATCCTTT 58.947 33.333 0.00 0.00 0.00 3.11
4623 5379 7.062956 CACATGATCTGTTGGTTTGATGAAATG 59.937 37.037 0.00 0.00 35.29 2.32
4659 5417 6.183309 AGAGATTTTTGCGAGTGTTATTCC 57.817 37.500 0.00 0.00 0.00 3.01
4715 5473 3.184628 AGATGGTCCTTGAGTTCATGGA 58.815 45.455 11.50 11.50 44.74 3.41
4716 5474 3.641434 AGATGGTCCTTGAGTTCATGG 57.359 47.619 7.54 7.54 41.16 3.66
4717 5475 4.330250 ACAAGATGGTCCTTGAGTTCATG 58.670 43.478 10.21 0.00 44.66 3.07
4718 5476 4.647564 ACAAGATGGTCCTTGAGTTCAT 57.352 40.909 10.21 0.00 44.66 2.57
4719 5477 5.491070 CATACAAGATGGTCCTTGAGTTCA 58.509 41.667 10.21 0.00 44.66 3.18
4720 5478 4.333926 GCATACAAGATGGTCCTTGAGTTC 59.666 45.833 10.21 0.00 44.66 3.01
4721 5479 4.263462 TGCATACAAGATGGTCCTTGAGTT 60.263 41.667 10.21 0.00 44.66 3.01
4722 5480 3.264193 TGCATACAAGATGGTCCTTGAGT 59.736 43.478 10.21 0.00 44.66 3.41
4723 5481 3.624861 GTGCATACAAGATGGTCCTTGAG 59.375 47.826 10.21 2.19 44.66 3.02
4724 5482 3.264193 AGTGCATACAAGATGGTCCTTGA 59.736 43.478 10.21 0.00 44.66 3.02
4725 5483 3.376234 CAGTGCATACAAGATGGTCCTTG 59.624 47.826 0.00 0.00 46.61 3.61
4726 5484 3.009473 ACAGTGCATACAAGATGGTCCTT 59.991 43.478 0.00 0.00 0.00 3.36
4727 5485 2.573462 ACAGTGCATACAAGATGGTCCT 59.427 45.455 0.00 0.00 0.00 3.85
4728 5486 2.991250 ACAGTGCATACAAGATGGTCC 58.009 47.619 0.00 0.00 0.00 4.46
4729 5487 6.051717 AGATTACAGTGCATACAAGATGGTC 58.948 40.000 0.00 0.00 0.00 4.02
4730 5488 5.994250 AGATTACAGTGCATACAAGATGGT 58.006 37.500 0.00 0.00 0.00 3.55
4731 5489 5.468072 GGAGATTACAGTGCATACAAGATGG 59.532 44.000 0.00 0.00 0.00 3.51
4732 5490 5.176406 CGGAGATTACAGTGCATACAAGATG 59.824 44.000 0.00 0.00 0.00 2.90
4733 5491 5.069119 TCGGAGATTACAGTGCATACAAGAT 59.931 40.000 0.00 0.00 0.00 2.40
4734 5492 4.401202 TCGGAGATTACAGTGCATACAAGA 59.599 41.667 0.00 0.00 0.00 3.02
4735 5493 4.682787 TCGGAGATTACAGTGCATACAAG 58.317 43.478 0.00 0.00 0.00 3.16
4736 5494 4.729227 TCGGAGATTACAGTGCATACAA 57.271 40.909 0.00 0.00 0.00 2.41
4737 5495 4.937201 ATCGGAGATTACAGTGCATACA 57.063 40.909 0.00 0.00 45.12 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.