Multiple sequence alignment - TraesCS2A01G346600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G346600 chr2A 100.000 6379 0 0 902 7280 585155830 585162208 0.000000e+00 11780.0
1 TraesCS2A01G346600 chr2A 100.000 510 0 0 1 510 585154929 585155438 0.000000e+00 942.0
2 TraesCS2A01G346600 chr2A 96.842 95 3 0 6892 6986 585161757 585161851 7.560000e-35 159.0
3 TraesCS2A01G346600 chr2A 96.842 95 3 0 6829 6923 585161820 585161914 7.560000e-35 159.0
4 TraesCS2A01G346600 chr2B 94.106 3631 126 39 910 4505 519025159 519028736 0.000000e+00 5439.0
5 TraesCS2A01G346600 chr2B 91.430 1762 75 31 4317 6066 519028876 519030573 0.000000e+00 2348.0
6 TraesCS2A01G346600 chr2B 93.210 486 17 5 6121 6593 519030690 519031172 0.000000e+00 701.0
7 TraesCS2A01G346600 chr2B 83.772 456 30 13 8 444 519024558 519024988 6.850000e-105 392.0
8 TraesCS2A01G346600 chr2B 92.079 101 4 2 4542 4642 519028738 519028834 9.850000e-29 139.0
9 TraesCS2A01G346600 chr2D 94.599 3425 114 31 966 4363 441537656 441541036 0.000000e+00 5234.0
10 TraesCS2A01G346600 chr2D 95.881 1481 44 4 4568 6045 441541418 441542884 0.000000e+00 2381.0
11 TraesCS2A01G346600 chr2D 95.059 506 12 4 6111 6606 441542885 441543387 0.000000e+00 784.0
12 TraesCS2A01G346600 chr2D 88.454 511 29 11 8 510 441537005 441537493 2.260000e-164 590.0
13 TraesCS2A01G346600 chr2D 94.652 187 7 3 4314 4499 441541141 441541325 3.320000e-73 287.0
14 TraesCS2A01G346600 chr2D 95.092 163 4 3 4377 4539 441541266 441541424 3.370000e-63 254.0
15 TraesCS2A01G346600 chr2D 96.000 75 1 1 6922 6996 441543760 441543832 3.570000e-23 121.0
16 TraesCS2A01G346600 chr2D 93.846 65 2 1 6859 6923 441543760 441543822 6.010000e-16 97.1
17 TraesCS2A01G346600 chr2D 86.486 74 2 3 4569 4642 441541038 441541103 2.820000e-09 75.0
18 TraesCS2A01G346600 chr1A 98.461 1494 20 2 902 2395 524704018 524705508 0.000000e+00 2628.0
19 TraesCS2A01G346600 chr1A 99.515 206 1 0 7075 7280 76388453 76388248 6.900000e-100 375.0
20 TraesCS2A01G346600 chr1A 99.515 206 1 0 7075 7280 79957829 79957624 6.900000e-100 375.0
21 TraesCS2A01G346600 chr1A 98.585 212 3 0 7069 7280 500535822 500536033 6.900000e-100 375.0
22 TraesCS2A01G346600 chr1A 97.309 223 2 4 281 501 524703665 524703885 6.900000e-100 375.0
23 TraesCS2A01G346600 chrUn 92.814 334 23 1 4361 4693 112462002 112461669 3.950000e-132 483.0
24 TraesCS2A01G346600 chrUn 94.186 258 11 1 4067 4324 112462253 112462000 2.460000e-104 390.0
25 TraesCS2A01G346600 chr6B 92.239 335 23 3 4361 4693 78459968 78460301 8.550000e-129 472.0
26 TraesCS2A01G346600 chr6B 92.278 259 15 2 4067 4324 78459716 78459970 5.370000e-96 363.0
27 TraesCS2A01G346600 chr6A 98.585 212 3 0 7069 7280 100445619 100445830 6.900000e-100 375.0
28 TraesCS2A01G346600 chr6A 98.585 212 3 0 7069 7280 459037145 459037356 6.900000e-100 375.0
29 TraesCS2A01G346600 chr5A 99.515 206 1 0 7075 7280 56479833 56479628 6.900000e-100 375.0
30 TraesCS2A01G346600 chr5A 99.515 206 1 0 7075 7280 687555035 687554830 6.900000e-100 375.0
31 TraesCS2A01G346600 chr4A 98.585 212 3 0 7069 7280 597567514 597567725 6.900000e-100 375.0
32 TraesCS2A01G346600 chr4A 99.515 206 1 0 7075 7280 615287829 615287624 6.900000e-100 375.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G346600 chr2A 585154929 585162208 7279 False 3260.000000 11780 98.4210 1 7280 4 chr2A.!!$F1 7279
1 TraesCS2A01G346600 chr2B 519024558 519031172 6614 False 1803.800000 5439 90.9194 8 6593 5 chr2B.!!$F1 6585
2 TraesCS2A01G346600 chr2D 441537005 441543832 6827 False 1091.455556 5234 93.3410 8 6996 9 chr2D.!!$F1 6988
3 TraesCS2A01G346600 chr1A 524703665 524705508 1843 False 1501.500000 2628 97.8850 281 2395 2 chr1A.!!$F2 2114
4 TraesCS2A01G346600 chrUn 112461669 112462253 584 True 436.500000 483 93.5000 4067 4693 2 chrUn.!!$R1 626
5 TraesCS2A01G346600 chr6B 78459716 78460301 585 False 417.500000 472 92.2585 4067 4693 2 chr6B.!!$F1 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
65 70 0.036765 TCTGCCGCGGTACAAAATCT 60.037 50.000 28.70 0.00 0.0 2.40 F
215 222 0.106967 GAAAGCCTCCCAGACCCATC 60.107 60.000 0.00 0.00 0.0 3.51 F
269 276 1.153429 CGATCCCGTCCTTTCCCAC 60.153 63.158 0.00 0.00 0.0 4.61 F
1761 1799 1.079503 GTGTTTGCGTTTTGGCCAAA 58.920 45.000 27.13 27.13 0.0 3.28 F
2428 2491 3.758554 GACAGGTAATGAACAAGCATGGT 59.241 43.478 0.00 0.00 0.0 3.55 F
3474 3556 1.062810 ACTATCACCCCCTCTCCTGAC 60.063 57.143 0.00 0.00 0.0 3.51 F
4176 4260 1.474077 GGTGTTGTGGGATGAGAATGC 59.526 52.381 0.00 0.00 0.0 3.56 F
4806 5280 3.766051 ACTTTCATGGAGCCAATTCTTCC 59.234 43.478 0.00 0.00 0.0 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1014 1047 1.611673 CCCTTCTTGGACAGCATCGTT 60.612 52.381 0.00 0.0 38.35 3.85 R
1761 1799 2.308866 CACAAAGACCCATAACCCTCCT 59.691 50.000 0.00 0.0 0.00 3.69 R
2226 2289 1.301677 GCACCTTTCTTCCCTCGCTG 61.302 60.000 0.00 0.0 0.00 5.18 R
2880 2944 0.444260 GTCGCTTAAACTGCTGCCTC 59.556 55.000 0.00 0.0 0.00 4.70 R
3574 3656 1.800805 TGCTTTTCTCTGGAAGCTCG 58.199 50.000 9.19 0.0 46.39 5.03 R
4446 4858 0.554792 CAGCCCCTCCCAATTCTCAT 59.445 55.000 0.00 0.0 0.00 2.90 R
5018 5495 0.613012 AGCTTCCTTGTGGGGATTGC 60.613 55.000 0.00 0.0 35.07 3.56 R
6804 7503 1.142667 TCTGCCAATGACACTTCCACA 59.857 47.619 0.00 0.0 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 32 0.528017 TTGTTTTCACACCGCAAGCA 59.472 45.000 0.00 0.00 30.32 3.91
39 42 2.612567 CCGCAAGCAACAACGGCTA 61.613 57.895 0.00 0.00 41.66 3.93
43 46 0.385974 CAAGCAACAACGGCTACAGC 60.386 55.000 0.00 0.00 41.66 4.40
44 47 0.535102 AAGCAACAACGGCTACAGCT 60.535 50.000 0.54 0.00 41.66 4.24
65 70 0.036765 TCTGCCGCGGTACAAAATCT 60.037 50.000 28.70 0.00 0.00 2.40
93 98 4.819630 ACTTACCGTTGCAAAGAAGATCAA 59.180 37.500 14.32 0.00 0.00 2.57
94 99 5.298276 ACTTACCGTTGCAAAGAAGATCAAA 59.702 36.000 14.32 0.00 0.00 2.69
95 100 3.964909 ACCGTTGCAAAGAAGATCAAAC 58.035 40.909 14.32 0.00 0.00 2.93
96 101 2.973224 CCGTTGCAAAGAAGATCAAACG 59.027 45.455 14.32 3.03 0.00 3.60
105 112 1.134946 GAAGATCAAACGGGGGCATTG 59.865 52.381 0.00 0.00 0.00 2.82
108 115 0.894835 ATCAAACGGGGGCATTGAAC 59.105 50.000 0.00 0.00 36.72 3.18
208 215 0.598065 CCAAAACGAAAGCCTCCCAG 59.402 55.000 0.00 0.00 0.00 4.45
209 216 1.604604 CAAAACGAAAGCCTCCCAGA 58.395 50.000 0.00 0.00 0.00 3.86
210 217 1.266989 CAAAACGAAAGCCTCCCAGAC 59.733 52.381 0.00 0.00 0.00 3.51
211 218 0.250770 AAACGAAAGCCTCCCAGACC 60.251 55.000 0.00 0.00 0.00 3.85
212 219 2.125766 AACGAAAGCCTCCCAGACCC 62.126 60.000 0.00 0.00 0.00 4.46
213 220 2.592993 CGAAAGCCTCCCAGACCCA 61.593 63.158 0.00 0.00 0.00 4.51
214 221 1.915078 CGAAAGCCTCCCAGACCCAT 61.915 60.000 0.00 0.00 0.00 4.00
215 222 0.106967 GAAAGCCTCCCAGACCCATC 60.107 60.000 0.00 0.00 0.00 3.51
216 223 1.575447 AAAGCCTCCCAGACCCATCC 61.575 60.000 0.00 0.00 0.00 3.51
217 224 3.493303 GCCTCCCAGACCCATCCC 61.493 72.222 0.00 0.00 0.00 3.85
218 225 2.042762 CCTCCCAGACCCATCCCA 59.957 66.667 0.00 0.00 0.00 4.37
253 260 2.063979 CATAGGACACCAGGGGCGA 61.064 63.158 0.00 0.00 0.00 5.54
268 275 3.026431 GCGATCCCGTCCTTTCCCA 62.026 63.158 0.00 0.00 38.24 4.37
269 276 1.153429 CGATCCCGTCCTTTCCCAC 60.153 63.158 0.00 0.00 0.00 4.61
1014 1047 1.355971 GCGCGATGTTCTACTCCAAA 58.644 50.000 12.10 0.00 0.00 3.28
1038 1071 3.170362 CTGTCCAAGAAGGGCCCA 58.830 61.111 27.56 0.00 43.21 5.36
1761 1799 1.079503 GTGTTTGCGTTTTGGCCAAA 58.920 45.000 27.13 27.13 0.00 3.28
2226 2289 6.995364 ACTGTAAGAGGGAAGAAAGTTCTAC 58.005 40.000 0.00 0.00 34.77 2.59
2428 2491 3.758554 GACAGGTAATGAACAAGCATGGT 59.241 43.478 0.00 0.00 0.00 3.55
2477 2540 4.202050 GCTTGAAGTGTGGTGTCTCATTTT 60.202 41.667 0.00 0.00 0.00 1.82
2654 2717 5.124617 TGAACATCAGCGTATGCCAAATTTA 59.875 36.000 2.51 0.00 44.31 1.40
2666 2729 5.100344 TGCCAAATTTATACGAGGTACCA 57.900 39.130 15.94 0.00 0.00 3.25
2749 2812 8.514594 TGCTTCTTATAACATCTGAAACAAAGG 58.485 33.333 0.00 0.00 0.00 3.11
2763 2826 3.825908 ACAAAGGAATTGGGGAGCTTA 57.174 42.857 0.00 0.00 43.66 3.09
2880 2944 5.685954 CAGAATTACTAAGCTTGCATGCATG 59.314 40.000 23.37 24.36 34.99 4.06
3289 3371 7.284074 TGGTGTTAAAAGATTACTTCCAGTGA 58.716 34.615 0.00 0.00 35.05 3.41
3319 3401 2.619177 GCTGATCTCTTGATGCAGCATT 59.381 45.455 9.90 0.00 44.13 3.56
3335 3417 4.348656 CAGCATTCCAACTGAAATGATCG 58.651 43.478 0.00 0.00 36.33 3.69
3355 3437 2.288457 CGGTGTCACTGATGAAGTCACT 60.288 50.000 5.84 0.00 36.83 3.41
3371 3453 5.398603 AGTCACTGATCTTCTGTACTTGG 57.601 43.478 0.00 0.00 0.00 3.61
3474 3556 1.062810 ACTATCACCCCCTCTCCTGAC 60.063 57.143 0.00 0.00 0.00 3.51
3574 3656 2.228343 GGATATGATGGCTGAAGCAAGC 59.772 50.000 4.43 0.00 44.36 4.01
3769 3851 9.866798 TGTAATTTGACATTATTAAGCATGCAA 57.133 25.926 21.98 6.70 0.00 4.08
3835 3917 3.261643 AGAATGTGGTGTGTGCAGATCTA 59.738 43.478 0.00 0.00 0.00 1.98
3891 3973 1.980036 TGGGTTAGCGGTAGGAAAACT 59.020 47.619 0.00 0.00 0.00 2.66
3908 3990 7.506114 AGGAAAACTGAACACAACACTATCTA 58.494 34.615 0.00 0.00 0.00 1.98
4176 4260 1.474077 GGTGTTGTGGGATGAGAATGC 59.526 52.381 0.00 0.00 0.00 3.56
4201 4286 9.982651 GCTATCCTTGATAATGAGTAAGTACAA 57.017 33.333 0.00 0.00 0.00 2.41
4238 4323 5.942236 AGAAGCTCTTTCATCTGTTGCATTA 59.058 36.000 0.00 0.00 38.31 1.90
4307 4392 7.602517 TTCTCTATCAGCTTAAGAAGTTTGC 57.397 36.000 6.67 0.00 0.00 3.68
4540 5014 8.995027 AACTTTAAATAGGATATGCATGGTCA 57.005 30.769 10.16 0.00 0.00 4.02
4657 5131 7.309990 CCATTCATACTGTTTTTGGAACATCCT 60.310 37.037 0.00 0.00 39.30 3.24
4658 5132 7.595819 TTCATACTGTTTTTGGAACATCCTT 57.404 32.000 0.00 0.00 39.30 3.36
4666 5140 5.576563 TTTTGGAACATCCTTCCTACAGA 57.423 39.130 0.99 0.00 39.30 3.41
4806 5280 3.766051 ACTTTCATGGAGCCAATTCTTCC 59.234 43.478 0.00 0.00 0.00 3.46
4831 5308 7.597369 CCATGTGATAACATTGAGCCAATTATG 59.403 37.037 0.00 0.00 31.05 1.90
4881 5358 4.081406 AGGCTCAGTTATTGATGCAAACA 58.919 39.130 0.00 0.00 34.68 2.83
5018 5495 4.711399 TCATATGAACCTGCTGAATCCAG 58.289 43.478 1.98 0.00 43.22 3.86
5147 5624 4.687018 TCAAGATGTTTGTGAATGCAATGC 59.313 37.500 0.00 0.00 0.00 3.56
5492 5970 3.544637 GCTGTTTGATGTTTGTGCTTTGC 60.545 43.478 0.00 0.00 0.00 3.68
5788 6266 1.699634 TGAAACTCTGGTAAGCCTGCT 59.300 47.619 0.00 0.00 34.18 4.24
5852 6333 7.345691 TGAACTAGATAAAAGGCATGGATTGA 58.654 34.615 0.00 0.00 0.00 2.57
5864 6345 6.072649 AGGCATGGATTGATACAAATGATCA 58.927 36.000 0.00 0.00 0.00 2.92
5976 6458 2.290367 CGTGTCCTCTTTCATTGCAACA 59.710 45.455 0.00 0.00 0.00 3.33
5986 6468 1.044725 CATTGCAACACGCGTCTTTC 58.955 50.000 9.86 0.00 46.97 2.62
6046 6533 3.252400 CAGTTGCTTGTGTCTTGCAAAA 58.748 40.909 0.00 0.00 46.22 2.44
6062 6549 7.867403 GTCTTGCAAAATTCCAGTTTAGATTCA 59.133 33.333 0.00 0.00 0.00 2.57
6066 6553 7.147976 GCAAAATTCCAGTTTAGATTCACACT 58.852 34.615 0.00 0.00 0.00 3.55
6068 6555 9.612620 CAAAATTCCAGTTTAGATTCACACTAC 57.387 33.333 0.00 0.00 0.00 2.73
6069 6556 7.596749 AATTCCAGTTTAGATTCACACTACG 57.403 36.000 0.00 0.00 0.00 3.51
6070 6557 5.717078 TCCAGTTTAGATTCACACTACGT 57.283 39.130 0.00 0.00 0.00 3.57
6071 6558 6.092955 TCCAGTTTAGATTCACACTACGTT 57.907 37.500 0.00 0.00 0.00 3.99
6072 6559 6.154445 TCCAGTTTAGATTCACACTACGTTC 58.846 40.000 0.00 0.00 0.00 3.95
6073 6560 6.015688 TCCAGTTTAGATTCACACTACGTTCT 60.016 38.462 0.00 0.00 0.00 3.01
6074 6561 6.645415 CCAGTTTAGATTCACACTACGTTCTT 59.355 38.462 0.00 0.00 0.00 2.52
6075 6562 7.148787 CCAGTTTAGATTCACACTACGTTCTTC 60.149 40.741 0.00 0.00 0.00 2.87
6076 6563 6.867293 AGTTTAGATTCACACTACGTTCTTCC 59.133 38.462 0.00 0.00 0.00 3.46
6077 6564 4.189639 AGATTCACACTACGTTCTTCCC 57.810 45.455 0.00 0.00 0.00 3.97
6078 6565 3.576982 AGATTCACACTACGTTCTTCCCA 59.423 43.478 0.00 0.00 0.00 4.37
6079 6566 3.823281 TTCACACTACGTTCTTCCCAA 57.177 42.857 0.00 0.00 0.00 4.12
6080 6567 3.823281 TCACACTACGTTCTTCCCAAA 57.177 42.857 0.00 0.00 0.00 3.28
6081 6568 4.139859 TCACACTACGTTCTTCCCAAAA 57.860 40.909 0.00 0.00 0.00 2.44
6082 6569 3.872771 TCACACTACGTTCTTCCCAAAAC 59.127 43.478 0.00 0.00 0.00 2.43
6083 6570 3.623960 CACACTACGTTCTTCCCAAAACA 59.376 43.478 0.00 0.00 0.00 2.83
6084 6571 3.624410 ACACTACGTTCTTCCCAAAACAC 59.376 43.478 0.00 0.00 0.00 3.32
6085 6572 3.623960 CACTACGTTCTTCCCAAAACACA 59.376 43.478 0.00 0.00 0.00 3.72
6086 6573 4.095185 CACTACGTTCTTCCCAAAACACAA 59.905 41.667 0.00 0.00 0.00 3.33
6087 6574 3.497297 ACGTTCTTCCCAAAACACAAC 57.503 42.857 0.00 0.00 0.00 3.32
6088 6575 2.820787 ACGTTCTTCCCAAAACACAACA 59.179 40.909 0.00 0.00 0.00 3.33
6089 6576 3.119637 ACGTTCTTCCCAAAACACAACAG 60.120 43.478 0.00 0.00 0.00 3.16
6095 6582 3.018149 TCCCAAAACACAACAGTGTACC 58.982 45.455 0.00 0.00 45.29 3.34
6112 6599 4.652421 GTGTACCCCTTGTATACTGATGGA 59.348 45.833 4.17 0.00 38.23 3.41
6234 6805 2.483106 CACAATCTCTGCAACTCCACAG 59.517 50.000 0.00 0.00 35.15 3.66
6265 6836 2.046023 TGCAGAATCCAGTGCCCG 60.046 61.111 0.00 0.00 39.04 6.13
6322 6897 5.163632 GGTAGTTTTAGGAGAAGAGGACTCG 60.164 48.000 0.00 0.00 35.49 4.18
6337 6912 4.200092 AGGACTCGAAGTTTCAGCTTTTT 58.800 39.130 0.00 0.00 0.00 1.94
6360 6935 4.711846 TGCTATATCCCGTAGCATCATCTT 59.288 41.667 3.89 0.00 46.92 2.40
6594 7182 5.789643 ATGAGTAAAAGAGCAGGCAAAAA 57.210 34.783 0.00 0.00 0.00 1.94
6628 7246 7.443879 GCCTTTTCTTGGTAATTTTTGGATCAA 59.556 33.333 0.00 0.00 0.00 2.57
6642 7260 8.776376 TTTTTGGATCAATTTTCTAGGCAATC 57.224 30.769 0.00 0.00 0.00 2.67
6646 7264 7.805163 TGGATCAATTTTCTAGGCAATCTCTA 58.195 34.615 0.00 0.00 0.00 2.43
6686 7338 0.861837 GTTGCTTCTGTGACCTGTCG 59.138 55.000 0.00 0.00 0.00 4.35
6690 7342 2.560981 TGCTTCTGTGACCTGTCGAATA 59.439 45.455 0.00 0.00 0.00 1.75
6695 7347 3.017442 CTGTGACCTGTCGAATAGGAGA 58.983 50.000 20.48 6.36 38.71 3.71
6696 7348 3.427573 TGTGACCTGTCGAATAGGAGAA 58.572 45.455 20.48 5.73 38.71 2.87
6725 7415 1.824230 TGGCAATACAATGTTCTGGGC 59.176 47.619 0.00 0.00 0.00 5.36
6729 7419 3.181493 GCAATACAATGTTCTGGGCTCTG 60.181 47.826 0.00 0.00 0.00 3.35
6746 7444 2.247557 GCATATGCAGTGCGCGAG 59.752 61.111 22.84 1.78 46.97 5.03
6748 7446 1.561730 CATATGCAGTGCGCGAGAC 59.438 57.895 12.10 5.23 46.97 3.36
6749 7447 1.592669 ATATGCAGTGCGCGAGACC 60.593 57.895 12.10 0.00 46.97 3.85
6750 7448 2.296814 ATATGCAGTGCGCGAGACCA 62.297 55.000 12.10 0.00 46.97 4.02
6767 7465 5.179368 CGAGACCACACACAATACTTCAAAT 59.821 40.000 0.00 0.00 0.00 2.32
6772 7470 5.473162 CCACACACAATACTTCAAATGGAGA 59.527 40.000 0.00 0.00 0.00 3.71
6773 7471 6.151648 CCACACACAATACTTCAAATGGAGAT 59.848 38.462 0.00 0.00 0.00 2.75
6774 7472 7.246311 CACACACAATACTTCAAATGGAGATC 58.754 38.462 0.00 0.00 0.00 2.75
6775 7473 6.942005 ACACACAATACTTCAAATGGAGATCA 59.058 34.615 0.00 0.00 0.00 2.92
6781 7480 5.893897 ACTTCAAATGGAGATCAAAGAGC 57.106 39.130 0.00 0.00 0.00 4.09
6796 7495 8.244802 AGATCAAAGAGCAGAATGAAAAATGAG 58.755 33.333 0.00 0.00 39.69 2.90
6799 7498 9.017509 TCAAAGAGCAGAATGAAAAATGAGTAT 57.982 29.630 0.00 0.00 39.69 2.12
6800 7499 9.635520 CAAAGAGCAGAATGAAAAATGAGTATT 57.364 29.630 0.00 0.00 39.69 1.89
6806 7505 9.846248 GCAGAATGAAAAATGAGTATTTACTGT 57.154 29.630 0.00 0.00 39.69 3.55
6812 7511 9.349713 TGAAAAATGAGTATTTACTGTGGAAGT 57.650 29.630 0.00 0.00 43.40 3.01
6813 7512 9.612620 GAAAAATGAGTATTTACTGTGGAAGTG 57.387 33.333 0.00 0.00 40.26 3.16
6814 7513 8.691661 AAAATGAGTATTTACTGTGGAAGTGT 57.308 30.769 0.00 0.00 40.26 3.55
6815 7514 7.907214 AATGAGTATTTACTGTGGAAGTGTC 57.093 36.000 0.00 0.00 40.26 3.67
6816 7515 6.413783 TGAGTATTTACTGTGGAAGTGTCA 57.586 37.500 0.00 0.00 40.26 3.58
6817 7516 7.004555 TGAGTATTTACTGTGGAAGTGTCAT 57.995 36.000 0.00 0.00 40.26 3.06
6818 7517 7.450074 TGAGTATTTACTGTGGAAGTGTCATT 58.550 34.615 0.00 0.00 40.26 2.57
6819 7518 7.387673 TGAGTATTTACTGTGGAAGTGTCATTG 59.612 37.037 0.00 0.00 40.26 2.82
6820 7519 5.964958 ATTTACTGTGGAAGTGTCATTGG 57.035 39.130 0.00 0.00 40.26 3.16
6821 7520 1.609208 ACTGTGGAAGTGTCATTGGC 58.391 50.000 0.00 0.00 37.88 4.52
6825 7524 2.224843 TGTGGAAGTGTCATTGGCAGAT 60.225 45.455 0.00 0.00 0.00 2.90
6827 7526 2.224843 TGGAAGTGTCATTGGCAGATGT 60.225 45.455 0.00 0.00 0.00 3.06
6828 7527 2.421424 GGAAGTGTCATTGGCAGATGTC 59.579 50.000 0.00 5.31 0.00 3.06
6830 7529 3.361281 AGTGTCATTGGCAGATGTCAT 57.639 42.857 0.00 0.00 30.15 3.06
6831 7530 3.276857 AGTGTCATTGGCAGATGTCATC 58.723 45.455 4.52 4.52 30.15 2.92
6832 7531 3.011818 GTGTCATTGGCAGATGTCATCA 58.988 45.455 15.20 0.00 30.15 3.07
6833 7532 3.630769 GTGTCATTGGCAGATGTCATCAT 59.369 43.478 15.20 0.00 36.95 2.45
6836 7535 5.297527 TGTCATTGGCAGATGTCATCATAAC 59.702 40.000 15.20 3.26 34.06 1.89
6838 7537 5.529800 TCATTGGCAGATGTCATCATAACTG 59.470 40.000 15.20 5.27 34.06 3.16
6839 7538 4.758773 TGGCAGATGTCATCATAACTGA 57.241 40.909 15.20 0.00 34.06 3.41
6840 7539 5.101648 TGGCAGATGTCATCATAACTGAA 57.898 39.130 15.20 0.00 34.37 3.02
6841 7540 5.499313 TGGCAGATGTCATCATAACTGAAA 58.501 37.500 15.20 0.00 34.37 2.69
6842 7541 6.124340 TGGCAGATGTCATCATAACTGAAAT 58.876 36.000 15.20 0.00 34.37 2.17
6843 7542 6.261603 TGGCAGATGTCATCATAACTGAAATC 59.738 38.462 15.20 0.00 37.55 2.17
6844 7543 6.261603 GGCAGATGTCATCATAACTGAAATCA 59.738 38.462 15.20 0.00 39.06 2.57
6845 7544 7.040617 GGCAGATGTCATCATAACTGAAATCAT 60.041 37.037 15.20 0.00 39.06 2.45
6846 7545 8.996271 GCAGATGTCATCATAACTGAAATCATA 58.004 33.333 15.20 0.00 39.06 2.15
6904 7614 6.713762 CCTATTTGGGCATGATAACTGAAA 57.286 37.500 0.00 0.00 0.00 2.69
6905 7615 7.294017 CCTATTTGGGCATGATAACTGAAAT 57.706 36.000 0.00 0.00 0.00 2.17
6906 7616 7.373493 CCTATTTGGGCATGATAACTGAAATC 58.627 38.462 0.00 0.00 0.00 2.17
6907 7617 6.795144 ATTTGGGCATGATAACTGAAATCA 57.205 33.333 0.00 0.00 37.73 2.57
6908 7618 6.795144 TTTGGGCATGATAACTGAAATCAT 57.205 33.333 0.00 4.43 43.28 2.45
6909 7619 7.894753 TTTGGGCATGATAACTGAAATCATA 57.105 32.000 0.00 0.00 41.13 2.15
6910 7620 8.481492 TTTGGGCATGATAACTGAAATCATAT 57.519 30.769 0.00 0.00 41.13 1.78
6911 7621 8.481492 TTGGGCATGATAACTGAAATCATATT 57.519 30.769 0.00 0.00 41.13 1.28
6912 7622 8.481492 TGGGCATGATAACTGAAATCATATTT 57.519 30.769 0.00 0.00 41.13 1.40
6913 7623 9.585369 TGGGCATGATAACTGAAATCATATTTA 57.415 29.630 0.00 0.00 41.13 1.40
6914 7624 9.846248 GGGCATGATAACTGAAATCATATTTAC 57.154 33.333 0.00 0.00 41.13 2.01
6929 7639 7.801716 TCATATTTACTGTGGTAATTGAGGC 57.198 36.000 0.00 0.00 37.69 4.70
6930 7640 6.481976 TCATATTTACTGTGGTAATTGAGGCG 59.518 38.462 0.00 0.00 37.69 5.52
6931 7641 2.018542 TACTGTGGTAATTGAGGCGC 57.981 50.000 0.00 0.00 0.00 6.53
6932 7642 0.324943 ACTGTGGTAATTGAGGCGCT 59.675 50.000 7.64 0.00 0.00 5.92
6933 7643 1.009829 CTGTGGTAATTGAGGCGCTC 58.990 55.000 7.64 3.37 0.00 5.03
6934 7644 0.323302 TGTGGTAATTGAGGCGCTCA 59.677 50.000 7.64 6.39 38.87 4.26
6935 7645 1.009829 GTGGTAATTGAGGCGCTCAG 58.990 55.000 7.64 0.00 41.75 3.35
6936 7646 0.613260 TGGTAATTGAGGCGCTCAGT 59.387 50.000 7.64 3.08 41.75 3.41
6937 7647 1.003118 TGGTAATTGAGGCGCTCAGTT 59.997 47.619 7.64 14.01 41.75 3.16
6938 7648 2.084546 GGTAATTGAGGCGCTCAGTTT 58.915 47.619 17.65 13.49 41.75 2.66
6939 7649 2.159517 GGTAATTGAGGCGCTCAGTTTG 60.160 50.000 17.65 0.00 41.75 2.93
6940 7650 0.883833 AATTGAGGCGCTCAGTTTGG 59.116 50.000 7.64 0.00 41.75 3.28
6941 7651 1.589716 ATTGAGGCGCTCAGTTTGGC 61.590 55.000 7.64 0.00 41.75 4.52
6942 7652 3.435186 GAGGCGCTCAGTTTGGCC 61.435 66.667 7.64 0.00 45.91 5.36
6947 7657 2.046314 GCTCAGTTTGGCCGCCTA 60.046 61.111 11.61 0.00 0.00 3.93
6948 7658 1.452108 GCTCAGTTTGGCCGCCTAT 60.452 57.895 11.61 0.00 0.00 2.57
6949 7659 1.032114 GCTCAGTTTGGCCGCCTATT 61.032 55.000 11.61 0.00 0.00 1.73
6950 7660 1.463674 CTCAGTTTGGCCGCCTATTT 58.536 50.000 11.61 0.00 0.00 1.40
6951 7661 1.133025 CTCAGTTTGGCCGCCTATTTG 59.867 52.381 11.61 5.01 0.00 2.32
6952 7662 0.173255 CAGTTTGGCCGCCTATTTGG 59.827 55.000 11.61 0.00 39.35 3.28
6953 7663 0.970427 AGTTTGGCCGCCTATTTGGG 60.970 55.000 11.61 0.00 36.00 4.12
6954 7664 1.077625 TTTGGCCGCCTATTTGGGT 59.922 52.632 11.61 0.00 36.00 4.51
6955 7665 0.331954 TTTGGCCGCCTATTTGGGTA 59.668 50.000 11.61 0.00 36.00 3.69
6996 7706 3.926058 ACTGTGGTAACCTGACAGTTT 57.074 42.857 0.93 0.00 46.41 2.66
6997 7707 6.482898 TTACTGTGGTAACCTGACAGTTTA 57.517 37.500 14.61 0.00 46.41 2.01
6998 7708 5.362105 ACTGTGGTAACCTGACAGTTTAA 57.638 39.130 0.93 0.00 46.41 1.52
6999 7709 5.747342 ACTGTGGTAACCTGACAGTTTAAA 58.253 37.500 0.93 0.00 46.41 1.52
7000 7710 5.820947 ACTGTGGTAACCTGACAGTTTAAAG 59.179 40.000 0.93 0.00 46.41 1.85
7001 7711 5.991861 TGTGGTAACCTGACAGTTTAAAGA 58.008 37.500 0.93 0.00 0.00 2.52
7002 7712 6.053005 TGTGGTAACCTGACAGTTTAAAGAG 58.947 40.000 0.93 0.00 0.00 2.85
7003 7713 6.053650 GTGGTAACCTGACAGTTTAAAGAGT 58.946 40.000 0.93 0.00 0.00 3.24
7004 7714 6.541278 GTGGTAACCTGACAGTTTAAAGAGTT 59.459 38.462 0.93 0.00 0.00 3.01
7005 7715 7.712205 GTGGTAACCTGACAGTTTAAAGAGTTA 59.288 37.037 0.93 0.00 0.00 2.24
7006 7716 8.434392 TGGTAACCTGACAGTTTAAAGAGTTAT 58.566 33.333 0.93 0.00 0.00 1.89
7007 7717 9.281371 GGTAACCTGACAGTTTAAAGAGTTATT 57.719 33.333 0.93 0.00 0.00 1.40
7009 7719 8.974060 AACCTGACAGTTTAAAGAGTTATTGA 57.026 30.769 0.93 0.00 0.00 2.57
7010 7720 8.379457 ACCTGACAGTTTAAAGAGTTATTGAC 57.621 34.615 0.93 0.00 0.00 3.18
7011 7721 7.990886 ACCTGACAGTTTAAAGAGTTATTGACA 59.009 33.333 0.93 0.00 0.00 3.58
7012 7722 8.283291 CCTGACAGTTTAAAGAGTTATTGACAC 58.717 37.037 0.93 0.00 0.00 3.67
7013 7723 8.725405 TGACAGTTTAAAGAGTTATTGACACA 57.275 30.769 0.00 0.00 0.00 3.72
7014 7724 9.337396 TGACAGTTTAAAGAGTTATTGACACAT 57.663 29.630 0.00 0.00 0.00 3.21
7025 7735 9.453572 AGAGTTATTGACACATACATGAATTGT 57.546 29.630 0.00 0.00 42.62 2.71
7026 7736 9.494479 GAGTTATTGACACATACATGAATTGTG 57.506 33.333 18.89 18.89 44.85 3.33
7034 7744 2.818130 ACATGAATTGTGTGGGTTGC 57.182 45.000 0.00 0.00 37.11 4.17
7035 7745 1.344114 ACATGAATTGTGTGGGTTGCC 59.656 47.619 0.00 0.00 37.11 4.52
7036 7746 0.975887 ATGAATTGTGTGGGTTGCCC 59.024 50.000 0.00 0.00 45.71 5.36
7050 7760 5.806654 GGGTTGCCCAATGTTATTATCAT 57.193 39.130 0.00 0.00 44.65 2.45
7051 7761 6.173427 GGGTTGCCCAATGTTATTATCATT 57.827 37.500 0.00 0.00 44.65 2.57
7052 7762 5.990996 GGGTTGCCCAATGTTATTATCATTG 59.009 40.000 15.86 15.86 46.50 2.82
7070 7780 9.921637 TTATCATTGGGCTTAAGTTAAAAACAG 57.078 29.630 4.02 0.00 0.00 3.16
7071 7781 7.589958 TCATTGGGCTTAAGTTAAAAACAGA 57.410 32.000 4.02 0.00 0.00 3.41
7072 7782 7.657336 TCATTGGGCTTAAGTTAAAAACAGAG 58.343 34.615 4.02 0.00 0.00 3.35
7073 7783 7.504238 TCATTGGGCTTAAGTTAAAAACAGAGA 59.496 33.333 4.02 0.00 0.00 3.10
7074 7784 7.833285 TTGGGCTTAAGTTAAAAACAGAGAT 57.167 32.000 4.02 0.00 0.00 2.75
7075 7785 7.448748 TGGGCTTAAGTTAAAAACAGAGATC 57.551 36.000 4.02 0.00 0.00 2.75
7076 7786 7.001674 TGGGCTTAAGTTAAAAACAGAGATCA 58.998 34.615 4.02 0.00 0.00 2.92
7077 7787 7.040686 TGGGCTTAAGTTAAAAACAGAGATCAC 60.041 37.037 4.02 0.00 0.00 3.06
7078 7788 7.175119 GGGCTTAAGTTAAAAACAGAGATCACT 59.825 37.037 4.02 0.00 0.00 3.41
7079 7789 8.231161 GGCTTAAGTTAAAAACAGAGATCACTC 58.769 37.037 4.02 0.00 42.90 3.51
7095 7805 1.888215 ACTCTCGTAAGTGACCGTGA 58.112 50.000 0.00 0.00 35.74 4.35
7096 7806 2.224606 ACTCTCGTAAGTGACCGTGAA 58.775 47.619 0.00 0.00 35.74 3.18
7097 7807 2.225963 ACTCTCGTAAGTGACCGTGAAG 59.774 50.000 0.00 0.00 35.74 3.02
7098 7808 1.538512 TCTCGTAAGTGACCGTGAAGG 59.461 52.381 0.00 0.00 42.63 3.46
7099 7809 0.599558 TCGTAAGTGACCGTGAAGGG 59.400 55.000 0.00 0.00 41.60 3.95
7100 7810 0.599558 CGTAAGTGACCGTGAAGGGA 59.400 55.000 0.00 0.00 46.96 4.20
7101 7811 1.203994 CGTAAGTGACCGTGAAGGGAT 59.796 52.381 0.00 0.00 46.96 3.85
7102 7812 2.353406 CGTAAGTGACCGTGAAGGGATT 60.353 50.000 0.00 0.00 46.96 3.01
7103 7813 2.185004 AAGTGACCGTGAAGGGATTG 57.815 50.000 0.00 0.00 46.96 2.67
7104 7814 1.348064 AGTGACCGTGAAGGGATTGA 58.652 50.000 0.00 0.00 46.96 2.57
7105 7815 1.002087 AGTGACCGTGAAGGGATTGAC 59.998 52.381 0.00 0.00 46.96 3.18
7106 7816 1.052617 TGACCGTGAAGGGATTGACA 58.947 50.000 0.00 0.00 46.96 3.58
7107 7817 1.418264 TGACCGTGAAGGGATTGACAA 59.582 47.619 0.00 0.00 46.96 3.18
7108 7818 1.804748 GACCGTGAAGGGATTGACAAC 59.195 52.381 0.00 0.00 46.96 3.32
7109 7819 1.165270 CCGTGAAGGGATTGACAACC 58.835 55.000 0.00 0.00 35.97 3.77
7110 7820 1.165270 CGTGAAGGGATTGACAACCC 58.835 55.000 14.59 14.59 45.88 4.11
7111 7821 1.545841 GTGAAGGGATTGACAACCCC 58.454 55.000 10.02 10.02 46.64 4.95
7116 7826 1.763968 GGGATTGACAACCCCTAAGC 58.236 55.000 10.82 0.00 40.19 3.09
7117 7827 1.379527 GGATTGACAACCCCTAAGCG 58.620 55.000 0.00 0.00 0.00 4.68
7118 7828 1.339727 GGATTGACAACCCCTAAGCGT 60.340 52.381 0.00 0.00 0.00 5.07
7119 7829 2.433436 GATTGACAACCCCTAAGCGTT 58.567 47.619 0.00 0.00 0.00 4.84
7120 7830 1.600023 TTGACAACCCCTAAGCGTTG 58.400 50.000 0.00 0.00 43.97 4.10
7121 7831 0.250553 TGACAACCCCTAAGCGTTGG 60.251 55.000 5.08 0.00 42.93 3.77
7122 7832 0.250597 GACAACCCCTAAGCGTTGGT 60.251 55.000 5.08 0.00 42.93 3.67
7123 7833 0.184211 ACAACCCCTAAGCGTTGGTT 59.816 50.000 5.08 0.00 42.93 3.67
7124 7834 3.030415 AACCCCTAAGCGTTGGTTG 57.970 52.632 0.00 0.00 39.54 3.77
7125 7835 1.176619 AACCCCTAAGCGTTGGTTGC 61.177 55.000 0.00 0.00 39.54 4.17
7126 7836 2.686816 CCCCTAAGCGTTGGTTGCG 61.687 63.158 0.00 0.00 37.44 4.85
7127 7837 1.669760 CCCTAAGCGTTGGTTGCGA 60.670 57.895 0.00 0.00 37.44 5.10
7128 7838 1.635663 CCCTAAGCGTTGGTTGCGAG 61.636 60.000 0.00 0.00 37.44 5.03
7129 7839 0.949105 CCTAAGCGTTGGTTGCGAGT 60.949 55.000 0.00 0.00 37.44 4.18
7130 7840 0.865769 CTAAGCGTTGGTTGCGAGTT 59.134 50.000 0.00 0.00 37.44 3.01
7131 7841 0.584396 TAAGCGTTGGTTGCGAGTTG 59.416 50.000 0.00 0.00 37.44 3.16
7132 7842 2.662091 AAGCGTTGGTTGCGAGTTGC 62.662 55.000 0.00 0.00 46.70 4.17
7133 7843 3.022287 CGTTGGTTGCGAGTTGCT 58.978 55.556 3.50 0.00 46.63 3.91
7134 7844 1.837538 GCGTTGGTTGCGAGTTGCTA 61.838 55.000 3.50 0.00 46.63 3.49
7135 7845 0.110823 CGTTGGTTGCGAGTTGCTAC 60.111 55.000 8.29 8.29 46.74 3.58
7138 7848 3.946907 GTTGCGAGTTGCTACCGT 58.053 55.556 5.71 0.00 46.63 4.83
7139 7849 2.231820 GTTGCGAGTTGCTACCGTT 58.768 52.632 5.71 0.00 46.63 4.44
7140 7850 0.584876 GTTGCGAGTTGCTACCGTTT 59.415 50.000 5.71 0.00 46.63 3.60
7141 7851 1.003223 GTTGCGAGTTGCTACCGTTTT 60.003 47.619 5.71 0.00 46.63 2.43
7142 7852 0.584396 TGCGAGTTGCTACCGTTTTG 59.416 50.000 3.50 0.00 46.63 2.44
7143 7853 0.584876 GCGAGTTGCTACCGTTTTGT 59.415 50.000 9.82 0.00 41.73 2.83
7144 7854 1.659211 GCGAGTTGCTACCGTTTTGTG 60.659 52.381 9.82 0.00 41.73 3.33
7145 7855 1.659211 CGAGTTGCTACCGTTTTGTGC 60.659 52.381 0.00 0.00 0.00 4.57
7146 7856 1.332375 GAGTTGCTACCGTTTTGTGCA 59.668 47.619 0.00 0.00 0.00 4.57
7147 7857 1.333619 AGTTGCTACCGTTTTGTGCAG 59.666 47.619 0.00 0.00 35.02 4.41
7148 7858 0.665835 TTGCTACCGTTTTGTGCAGG 59.334 50.000 0.00 0.00 35.02 4.85
7149 7859 0.464735 TGCTACCGTTTTGTGCAGGT 60.465 50.000 0.00 0.00 40.52 4.00
7150 7860 1.202663 TGCTACCGTTTTGTGCAGGTA 60.203 47.619 0.00 0.00 38.12 3.08
7151 7861 1.196127 GCTACCGTTTTGTGCAGGTAC 59.804 52.381 0.00 0.00 38.12 3.34
7152 7862 1.458064 CTACCGTTTTGTGCAGGTACG 59.542 52.381 0.00 0.00 38.12 3.67
7153 7863 0.179078 ACCGTTTTGTGCAGGTACGA 60.179 50.000 10.92 0.00 34.83 3.43
7154 7864 0.511221 CCGTTTTGTGCAGGTACGAG 59.489 55.000 10.92 0.57 34.36 4.18
7155 7865 0.511221 CGTTTTGTGCAGGTACGAGG 59.489 55.000 5.02 0.00 34.36 4.63
7156 7866 0.872388 GTTTTGTGCAGGTACGAGGG 59.128 55.000 0.00 0.00 0.00 4.30
7157 7867 0.759959 TTTTGTGCAGGTACGAGGGA 59.240 50.000 0.00 0.00 0.00 4.20
7158 7868 0.034337 TTTGTGCAGGTACGAGGGAC 59.966 55.000 0.00 0.00 0.00 4.46
7160 7870 0.830444 TGTGCAGGTACGAGGGACTT 60.830 55.000 0.00 0.00 41.55 3.01
7162 7872 1.448013 GCAGGTACGAGGGACTTGC 60.448 63.158 0.00 0.00 45.68 4.01
7163 7873 1.153823 CAGGTACGAGGGACTTGCG 60.154 63.158 0.00 0.00 45.68 4.85
7164 7874 2.508663 GGTACGAGGGACTTGCGC 60.509 66.667 0.00 0.00 45.68 6.09
7165 7875 2.879462 GTACGAGGGACTTGCGCG 60.879 66.667 0.00 0.00 45.68 6.86
7166 7876 3.367743 TACGAGGGACTTGCGCGT 61.368 61.111 8.43 0.00 45.68 6.01
7167 7877 3.620300 TACGAGGGACTTGCGCGTG 62.620 63.158 8.43 0.00 45.68 5.34
7168 7878 4.717629 CGAGGGACTTGCGCGTGA 62.718 66.667 8.43 0.00 41.55 4.35
7169 7879 3.112709 GAGGGACTTGCGCGTGAC 61.113 66.667 8.43 0.00 41.55 3.67
7170 7880 4.681978 AGGGACTTGCGCGTGACC 62.682 66.667 8.43 7.67 27.25 4.02
7171 7881 4.681978 GGGACTTGCGCGTGACCT 62.682 66.667 8.43 0.00 0.00 3.85
7172 7882 3.112709 GGACTTGCGCGTGACCTC 61.113 66.667 8.43 0.00 0.00 3.85
7173 7883 3.112709 GACTTGCGCGTGACCTCC 61.113 66.667 8.43 0.00 0.00 4.30
7174 7884 3.575351 GACTTGCGCGTGACCTCCT 62.575 63.158 8.43 0.00 0.00 3.69
7175 7885 2.209064 GACTTGCGCGTGACCTCCTA 62.209 60.000 8.43 0.00 0.00 2.94
7176 7886 1.805945 CTTGCGCGTGACCTCCTAC 60.806 63.158 8.43 0.00 0.00 3.18
7177 7887 2.214181 CTTGCGCGTGACCTCCTACT 62.214 60.000 8.43 0.00 0.00 2.57
7178 7888 2.202623 GCGCGTGACCTCCTACTG 60.203 66.667 8.43 0.00 0.00 2.74
7179 7889 2.490217 CGCGTGACCTCCTACTGG 59.510 66.667 0.00 0.00 0.00 4.00
7180 7890 2.044555 CGCGTGACCTCCTACTGGA 61.045 63.158 0.00 0.00 40.69 3.86
7181 7891 1.384989 CGCGTGACCTCCTACTGGAT 61.385 60.000 0.00 0.00 42.29 3.41
7182 7892 0.824759 GCGTGACCTCCTACTGGATT 59.175 55.000 0.00 0.00 42.29 3.01
7183 7893 1.471676 GCGTGACCTCCTACTGGATTG 60.472 57.143 0.00 0.00 42.29 2.67
7184 7894 2.100197 CGTGACCTCCTACTGGATTGA 58.900 52.381 0.00 0.00 42.29 2.57
7185 7895 2.695666 CGTGACCTCCTACTGGATTGAT 59.304 50.000 0.00 0.00 42.29 2.57
7186 7896 3.889538 CGTGACCTCCTACTGGATTGATA 59.110 47.826 0.00 0.00 42.29 2.15
7187 7897 4.261656 CGTGACCTCCTACTGGATTGATAC 60.262 50.000 0.00 0.00 42.29 2.24
7188 7898 4.039366 GTGACCTCCTACTGGATTGATACC 59.961 50.000 0.00 0.00 42.29 2.73
7189 7899 4.078571 TGACCTCCTACTGGATTGATACCT 60.079 45.833 0.00 0.00 42.29 3.08
7190 7900 4.897051 ACCTCCTACTGGATTGATACCTT 58.103 43.478 0.00 0.00 42.29 3.50
7191 7901 4.656112 ACCTCCTACTGGATTGATACCTTG 59.344 45.833 0.00 0.00 42.29 3.61
7192 7902 4.040952 CCTCCTACTGGATTGATACCTTGG 59.959 50.000 0.00 0.00 42.29 3.61
7193 7903 4.631234 TCCTACTGGATTGATACCTTGGT 58.369 43.478 0.00 0.00 37.46 3.67
7194 7904 5.036916 TCCTACTGGATTGATACCTTGGTT 58.963 41.667 0.00 0.00 37.46 3.67
7195 7905 5.130477 TCCTACTGGATTGATACCTTGGTTC 59.870 44.000 0.00 0.00 37.46 3.62
7196 7906 5.131142 CCTACTGGATTGATACCTTGGTTCT 59.869 44.000 0.00 0.00 34.57 3.01
7197 7907 5.104259 ACTGGATTGATACCTTGGTTCTC 57.896 43.478 0.00 0.00 0.00 2.87
7198 7908 4.536090 ACTGGATTGATACCTTGGTTCTCA 59.464 41.667 0.00 0.00 0.00 3.27
7199 7909 5.014123 ACTGGATTGATACCTTGGTTCTCAA 59.986 40.000 15.14 15.14 0.00 3.02
7200 7910 5.886609 TGGATTGATACCTTGGTTCTCAAA 58.113 37.500 16.13 3.96 34.56 2.69
7201 7911 6.310941 TGGATTGATACCTTGGTTCTCAAAA 58.689 36.000 16.13 7.35 34.56 2.44
7202 7912 6.780031 TGGATTGATACCTTGGTTCTCAAAAA 59.220 34.615 16.13 7.12 34.56 1.94
7203 7913 7.090808 GGATTGATACCTTGGTTCTCAAAAAC 58.909 38.462 16.13 12.11 34.56 2.43
7204 7914 7.039714 GGATTGATACCTTGGTTCTCAAAAACT 60.040 37.037 16.13 5.53 34.56 2.66
7205 7915 6.633500 TGATACCTTGGTTCTCAAAAACTG 57.367 37.500 0.00 0.00 34.56 3.16
7206 7916 6.361433 TGATACCTTGGTTCTCAAAAACTGA 58.639 36.000 0.00 0.00 34.56 3.41
7220 7930 7.429636 TCAAAAACTGAGGGAAATACTTACG 57.570 36.000 0.00 0.00 0.00 3.18
7221 7931 5.874895 AAAACTGAGGGAAATACTTACGC 57.125 39.130 0.00 0.00 0.00 4.42
7222 7932 4.820894 AACTGAGGGAAATACTTACGCT 57.179 40.909 0.00 0.00 0.00 5.07
7223 7933 5.927281 AACTGAGGGAAATACTTACGCTA 57.073 39.130 0.00 0.00 0.00 4.26
7224 7934 5.259832 ACTGAGGGAAATACTTACGCTAC 57.740 43.478 0.00 0.00 0.00 3.58
7225 7935 4.954826 ACTGAGGGAAATACTTACGCTACT 59.045 41.667 0.00 0.00 0.00 2.57
7226 7936 5.163540 ACTGAGGGAAATACTTACGCTACTG 60.164 44.000 0.00 0.00 0.00 2.74
7227 7937 4.708421 TGAGGGAAATACTTACGCTACTGT 59.292 41.667 0.00 0.00 0.00 3.55
7228 7938 5.007385 AGGGAAATACTTACGCTACTGTG 57.993 43.478 0.00 0.00 0.00 3.66
7229 7939 3.554731 GGGAAATACTTACGCTACTGTGC 59.445 47.826 0.00 0.00 0.00 4.57
7230 7940 4.430908 GGAAATACTTACGCTACTGTGCT 58.569 43.478 0.00 0.00 0.00 4.40
7231 7941 4.267928 GGAAATACTTACGCTACTGTGCTG 59.732 45.833 0.00 0.00 0.00 4.41
7232 7942 2.273370 TACTTACGCTACTGTGCTGC 57.727 50.000 0.00 0.00 0.00 5.25
7233 7943 0.317160 ACTTACGCTACTGTGCTGCA 59.683 50.000 0.00 0.00 0.00 4.41
7234 7944 1.066858 ACTTACGCTACTGTGCTGCAT 60.067 47.619 5.27 0.00 0.00 3.96
7235 7945 1.590238 CTTACGCTACTGTGCTGCATC 59.410 52.381 5.27 0.09 0.00 3.91
7236 7946 0.530288 TACGCTACTGTGCTGCATCA 59.470 50.000 5.27 5.20 0.00 3.07
7237 7947 1.016130 ACGCTACTGTGCTGCATCAC 61.016 55.000 13.71 13.71 37.48 3.06
7238 7948 1.699656 CGCTACTGTGCTGCATCACC 61.700 60.000 17.50 1.41 36.17 4.02
7239 7949 1.372087 GCTACTGTGCTGCATCACCC 61.372 60.000 17.50 0.00 36.17 4.61
7240 7950 0.745845 CTACTGTGCTGCATCACCCC 60.746 60.000 17.50 0.00 36.17 4.95
7241 7951 2.196997 TACTGTGCTGCATCACCCCC 62.197 60.000 17.50 0.00 36.17 5.40
7242 7952 3.259314 TGTGCTGCATCACCCCCT 61.259 61.111 17.50 0.00 36.17 4.79
7243 7953 2.439156 GTGCTGCATCACCCCCTC 60.439 66.667 9.57 0.00 0.00 4.30
7244 7954 3.731728 TGCTGCATCACCCCCTCC 61.732 66.667 0.00 0.00 0.00 4.30
7245 7955 3.415087 GCTGCATCACCCCCTCCT 61.415 66.667 0.00 0.00 0.00 3.69
7246 7956 2.914289 CTGCATCACCCCCTCCTC 59.086 66.667 0.00 0.00 0.00 3.71
7247 7957 1.692042 CTGCATCACCCCCTCCTCT 60.692 63.158 0.00 0.00 0.00 3.69
7248 7958 1.229951 TGCATCACCCCCTCCTCTT 60.230 57.895 0.00 0.00 0.00 2.85
7249 7959 1.274703 TGCATCACCCCCTCCTCTTC 61.275 60.000 0.00 0.00 0.00 2.87
7250 7960 1.826024 CATCACCCCCTCCTCTTCG 59.174 63.158 0.00 0.00 0.00 3.79
7251 7961 1.383248 ATCACCCCCTCCTCTTCGG 60.383 63.158 0.00 0.00 0.00 4.30
7252 7962 1.886730 ATCACCCCCTCCTCTTCGGA 61.887 60.000 0.00 0.00 40.30 4.55
7262 7972 3.121738 TCCTCTTCGGAGAAAACCAAC 57.878 47.619 0.00 0.00 45.90 3.77
7263 7973 1.798813 CCTCTTCGGAGAAAACCAACG 59.201 52.381 0.00 0.00 45.90 4.10
7264 7974 1.194772 CTCTTCGGAGAAAACCAACGC 59.805 52.381 0.00 0.00 45.90 4.84
7265 7975 1.202604 TCTTCGGAGAAAACCAACGCT 60.203 47.619 0.00 0.00 45.90 5.07
7266 7976 2.036217 TCTTCGGAGAAAACCAACGCTA 59.964 45.455 0.00 0.00 45.90 4.26
7267 7977 2.074547 TCGGAGAAAACCAACGCTAG 57.925 50.000 0.00 0.00 0.00 3.42
7268 7978 0.442699 CGGAGAAAACCAACGCTAGC 59.557 55.000 4.06 4.06 0.00 3.42
7269 7979 1.809684 GGAGAAAACCAACGCTAGCT 58.190 50.000 13.93 0.00 0.00 3.32
7270 7980 1.732809 GGAGAAAACCAACGCTAGCTC 59.267 52.381 13.93 0.36 0.00 4.09
7271 7981 1.390463 GAGAAAACCAACGCTAGCTCG 59.610 52.381 13.93 0.00 0.00 5.03
7272 7982 1.000506 AGAAAACCAACGCTAGCTCGA 59.999 47.619 13.93 0.00 0.00 4.04
7273 7983 1.390463 GAAAACCAACGCTAGCTCGAG 59.610 52.381 13.93 8.45 0.00 4.04
7274 7984 0.601558 AAACCAACGCTAGCTCGAGA 59.398 50.000 18.75 0.00 0.00 4.04
7275 7985 0.109226 AACCAACGCTAGCTCGAGAC 60.109 55.000 18.75 7.74 0.00 3.36
7276 7986 1.583967 CCAACGCTAGCTCGAGACG 60.584 63.158 18.75 15.56 0.00 4.18
7277 7987 1.134901 CAACGCTAGCTCGAGACGT 59.865 57.895 18.75 16.22 38.88 4.34
7278 7988 0.372679 CAACGCTAGCTCGAGACGTA 59.627 55.000 18.75 2.96 35.64 3.57
7279 7989 0.651551 AACGCTAGCTCGAGACGTAG 59.348 55.000 18.75 13.80 35.64 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.654414 TGCGGTGTGAAAACAAGTTTTT 58.346 36.364 11.75 0.00 42.26 1.94
5 6 3.305398 TGCGGTGTGAAAACAAGTTTT 57.695 38.095 10.43 10.43 44.59 2.43
6 7 3.249917 CTTGCGGTGTGAAAACAAGTTT 58.750 40.909 0.00 0.00 34.43 2.66
9 10 1.199624 GCTTGCGGTGTGAAAACAAG 58.800 50.000 0.00 0.00 40.49 3.16
29 32 0.969894 AGAGAGCTGTAGCCGTTGTT 59.030 50.000 0.00 0.00 43.38 2.83
43 46 0.669318 TTTTGTACCGCGGCAGAGAG 60.669 55.000 28.58 0.00 0.00 3.20
44 47 0.036765 ATTTTGTACCGCGGCAGAGA 60.037 50.000 28.58 2.39 0.00 3.10
65 70 7.086230 TCTTCTTTGCAACGGTAAGTTTTTA 57.914 32.000 0.00 0.00 42.02 1.52
93 98 2.283604 GGGTTCAATGCCCCCGTT 60.284 61.111 0.00 0.00 40.26 4.44
96 101 2.283604 AACGGGTTCAATGCCCCC 60.284 61.111 2.83 0.40 43.18 5.40
151 158 3.641437 TGCTCCTTTTGAATTTCGTGG 57.359 42.857 0.00 0.00 0.00 4.94
208 215 1.152963 CGTTGGGATGGGATGGGTC 60.153 63.158 0.00 0.00 0.00 4.46
209 216 1.921869 GACGTTGGGATGGGATGGGT 61.922 60.000 0.00 0.00 0.00 4.51
210 217 1.152963 GACGTTGGGATGGGATGGG 60.153 63.158 0.00 0.00 0.00 4.00
211 218 0.179045 GAGACGTTGGGATGGGATGG 60.179 60.000 0.00 0.00 0.00 3.51
212 219 0.530650 CGAGACGTTGGGATGGGATG 60.531 60.000 0.00 0.00 0.00 3.51
213 220 0.976073 ACGAGACGTTGGGATGGGAT 60.976 55.000 0.00 0.00 36.35 3.85
214 221 0.323633 TACGAGACGTTGGGATGGGA 60.324 55.000 1.53 0.00 41.54 4.37
215 222 0.750850 ATACGAGACGTTGGGATGGG 59.249 55.000 1.53 0.00 41.54 4.00
216 223 1.407618 TGATACGAGACGTTGGGATGG 59.592 52.381 1.53 0.00 41.54 3.51
217 224 2.863401 TGATACGAGACGTTGGGATG 57.137 50.000 1.53 0.00 41.54 3.51
218 225 3.506455 CCTATGATACGAGACGTTGGGAT 59.494 47.826 1.53 0.00 41.54 3.85
253 260 2.666098 CGGTGGGAAAGGACGGGAT 61.666 63.158 0.00 0.00 0.00 3.85
1014 1047 1.611673 CCCTTCTTGGACAGCATCGTT 60.612 52.381 0.00 0.00 38.35 3.85
1708 1746 4.382754 GGTTCAAGCTTTTTATCAACAGCG 59.617 41.667 0.00 0.00 37.35 5.18
1761 1799 2.308866 CACAAAGACCCATAACCCTCCT 59.691 50.000 0.00 0.00 0.00 3.69
2002 2065 9.975218 AAGAAAGAAAATACTTGAAGGGCTATA 57.025 29.630 0.00 0.00 0.00 1.31
2226 2289 1.301677 GCACCTTTCTTCCCTCGCTG 61.302 60.000 0.00 0.00 0.00 5.18
2428 2491 9.710979 CAACAAAGAAATGAAACTAGTTTACGA 57.289 29.630 20.58 8.52 32.11 3.43
2477 2540 6.013379 TCTCTGCAGAGGAATTTAGAAGGAAA 60.013 38.462 36.92 14.11 42.30 3.13
2654 2717 2.748388 AGGAAGCTTGGTACCTCGTAT 58.252 47.619 14.36 0.00 0.00 3.06
2666 2729 3.589288 AGTGAATGGTAGGAAGGAAGCTT 59.411 43.478 0.00 0.00 0.00 3.74
2749 2812 4.882842 TTTTTGGTAAGCTCCCCAATTC 57.117 40.909 15.56 0.00 40.28 2.17
2763 2826 7.661847 GCCTAGACTACATAGCATATTTTTGGT 59.338 37.037 0.00 0.00 0.00 3.67
2810 2874 8.792830 TTTATAGATCACATTAGGTGGTAGGT 57.207 34.615 0.00 0.00 42.18 3.08
2880 2944 0.444260 GTCGCTTAAACTGCTGCCTC 59.556 55.000 0.00 0.00 0.00 4.70
3289 3371 5.297278 GCATCAAGAGATCAGCTCAGAAATT 59.703 40.000 0.00 0.00 46.45 1.82
3319 3401 3.244387 TGACACCGATCATTTCAGTTGGA 60.244 43.478 0.00 0.00 0.00 3.53
3335 3417 3.393089 AGTGACTTCATCAGTGACACC 57.607 47.619 0.84 0.00 41.88 4.16
3355 3437 6.620877 ATGTTACCCAAGTACAGAAGATCA 57.379 37.500 0.00 0.00 0.00 2.92
3371 3453 5.367945 TCAAGTTCATCCCCTATGTTACC 57.632 43.478 0.00 0.00 36.89 2.85
3474 3556 6.036953 GGAACAAGTCTGCTCTTATGAATGAG 59.963 42.308 0.00 0.00 0.00 2.90
3574 3656 1.800805 TGCTTTTCTCTGGAAGCTCG 58.199 50.000 9.19 0.00 46.39 5.03
3908 3990 6.485830 TTCCTCGATGTCAGGAATTTCTAT 57.514 37.500 0.00 0.00 43.84 1.98
4238 4323 4.517285 CATACAAGCACACAGGAATAGGT 58.483 43.478 0.00 0.00 0.00 3.08
4307 4392 8.077991 CCATATTACTAACTCATTTGCACCATG 58.922 37.037 0.00 0.00 0.00 3.66
4375 4787 5.163416 CCACTCCCAGTTCTCAAACAAAAAT 60.163 40.000 0.00 0.00 37.88 1.82
4446 4858 0.554792 CAGCCCCTCCCAATTCTCAT 59.445 55.000 0.00 0.00 0.00 2.90
4657 5131 5.977489 TTTCTCTCATCGTTCTGTAGGAA 57.023 39.130 0.00 0.00 0.00 3.36
4658 5132 5.163509 CCATTTCTCTCATCGTTCTGTAGGA 60.164 44.000 0.00 0.00 0.00 2.94
4666 5140 4.440250 CCGTCTACCATTTCTCTCATCGTT 60.440 45.833 0.00 0.00 0.00 3.85
4806 5280 7.115805 GCATAATTGGCTCAATGTTATCACATG 59.884 37.037 0.00 0.00 43.34 3.21
4831 5308 8.834465 ACTAGATGAATGATTGACTTACATTGC 58.166 33.333 0.00 0.00 34.94 3.56
5018 5495 0.613012 AGCTTCCTTGTGGGGATTGC 60.613 55.000 0.00 0.00 35.07 3.56
5065 5542 3.833650 TGGATGCCATTTGTCAGTTCATT 59.166 39.130 0.00 0.00 0.00 2.57
5147 5624 7.390440 TGTTGTTCTTTTCATAGGGTGTATCAG 59.610 37.037 0.00 0.00 0.00 2.90
5286 5763 3.106672 CACCGAGTTTAGATGTAGACGC 58.893 50.000 0.00 0.00 0.00 5.19
5439 5917 9.530633 GCACAAGCAGTATAAACTACTATAAGT 57.469 33.333 0.00 0.00 41.58 2.24
5440 5918 9.751542 AGCACAAGCAGTATAAACTACTATAAG 57.248 33.333 0.00 0.00 45.49 1.73
5441 5919 9.745880 GAGCACAAGCAGTATAAACTACTATAA 57.254 33.333 0.00 0.00 45.49 0.98
5442 5920 8.074370 CGAGCACAAGCAGTATAAACTACTATA 58.926 37.037 0.00 0.00 45.49 1.31
5443 5921 6.918569 CGAGCACAAGCAGTATAAACTACTAT 59.081 38.462 0.00 0.00 45.49 2.12
5444 5922 6.127814 ACGAGCACAAGCAGTATAAACTACTA 60.128 38.462 0.00 0.00 45.49 1.82
5445 5923 5.103000 CGAGCACAAGCAGTATAAACTACT 58.897 41.667 0.00 0.00 45.49 2.57
5446 5924 4.863131 ACGAGCACAAGCAGTATAAACTAC 59.137 41.667 0.00 0.00 45.49 2.73
5788 6266 7.506114 AGAACTCAACTAGGAAACATGTTACA 58.494 34.615 12.39 0.00 0.00 2.41
5833 6314 8.537728 TTTGTATCAATCCATGCCTTTTATCT 57.462 30.769 0.00 0.00 0.00 1.98
5852 6333 6.115446 ACACCGAGTGATTGATCATTTGTAT 58.885 36.000 10.46 0.00 39.30 2.29
5864 6345 3.685139 ATGTCAAGACACCGAGTGATT 57.315 42.857 4.84 3.24 45.05 2.57
5976 6458 3.889196 TGCAAATTTAGAAAGACGCGT 57.111 38.095 13.85 13.85 0.00 6.01
6046 6533 6.698380 ACGTAGTGTGAATCTAAACTGGAAT 58.302 36.000 0.00 0.00 42.51 3.01
6062 6549 3.624410 GTGTTTTGGGAAGAACGTAGTGT 59.376 43.478 0.00 0.00 45.00 3.55
6066 6553 4.008330 TGTTGTGTTTTGGGAAGAACGTA 58.992 39.130 0.00 0.00 0.00 3.57
6068 6555 3.119637 ACTGTTGTGTTTTGGGAAGAACG 60.120 43.478 0.00 0.00 0.00 3.95
6069 6556 4.173256 CACTGTTGTGTTTTGGGAAGAAC 58.827 43.478 0.00 0.00 39.24 3.01
6070 6557 4.448537 CACTGTTGTGTTTTGGGAAGAA 57.551 40.909 0.00 0.00 39.24 2.52
6083 6570 4.842380 AGTATACAAGGGGTACACTGTTGT 59.158 41.667 17.05 17.05 38.29 3.32
6084 6571 5.416271 AGTATACAAGGGGTACACTGTTG 57.584 43.478 5.50 8.64 38.29 3.33
6088 6575 4.654262 CCATCAGTATACAAGGGGTACACT 59.346 45.833 5.50 0.00 40.31 3.55
6089 6576 4.652421 TCCATCAGTATACAAGGGGTACAC 59.348 45.833 5.50 0.00 34.07 2.90
6265 6836 2.413897 GCTGCTGCTAAGAAGTTGAAGC 60.414 50.000 8.53 0.00 30.62 3.86
6360 6935 3.384168 ACTGGCCTGTTACATATCCTCA 58.616 45.455 9.88 0.00 0.00 3.86
6594 7182 5.669164 TTACCAAGAAAAGGCAAAGTGTT 57.331 34.783 0.00 0.00 0.00 3.32
6597 7185 7.066887 CCAAAAATTACCAAGAAAAGGCAAAGT 59.933 33.333 0.00 0.00 0.00 2.66
6600 7188 6.653989 TCCAAAAATTACCAAGAAAAGGCAA 58.346 32.000 0.00 0.00 0.00 4.52
6601 7189 6.240549 TCCAAAAATTACCAAGAAAAGGCA 57.759 33.333 0.00 0.00 0.00 4.75
6602 7190 6.934083 TGATCCAAAAATTACCAAGAAAAGGC 59.066 34.615 0.00 0.00 0.00 4.35
6603 7191 8.900983 TTGATCCAAAAATTACCAAGAAAAGG 57.099 30.769 0.00 0.00 0.00 3.11
6635 7253 3.913163 CCCCCTAAGAATAGAGATTGCCT 59.087 47.826 0.00 0.00 0.00 4.75
6640 7258 4.493819 TGCTCCCCCTAAGAATAGAGAT 57.506 45.455 0.00 0.00 0.00 2.75
6642 7260 3.970640 ACTTGCTCCCCCTAAGAATAGAG 59.029 47.826 0.00 0.00 0.00 2.43
6646 7264 2.507471 CAGACTTGCTCCCCCTAAGAAT 59.493 50.000 0.00 0.00 0.00 2.40
6729 7419 2.239812 TCTCGCGCACTGCATATGC 61.240 57.895 21.09 21.09 46.97 3.14
6746 7444 5.240623 TCCATTTGAAGTATTGTGTGTGGTC 59.759 40.000 0.00 0.00 0.00 4.02
6748 7446 5.473162 TCTCCATTTGAAGTATTGTGTGTGG 59.527 40.000 0.00 0.00 0.00 4.17
6749 7447 6.558771 TCTCCATTTGAAGTATTGTGTGTG 57.441 37.500 0.00 0.00 0.00 3.82
6750 7448 6.942005 TGATCTCCATTTGAAGTATTGTGTGT 59.058 34.615 0.00 0.00 0.00 3.72
6751 7449 7.381766 TGATCTCCATTTGAAGTATTGTGTG 57.618 36.000 0.00 0.00 0.00 3.82
6767 7465 4.831674 TCATTCTGCTCTTTGATCTCCA 57.168 40.909 0.00 0.00 0.00 3.86
6772 7470 7.893658 ACTCATTTTTCATTCTGCTCTTTGAT 58.106 30.769 0.00 0.00 0.00 2.57
6773 7471 7.281040 ACTCATTTTTCATTCTGCTCTTTGA 57.719 32.000 0.00 0.00 0.00 2.69
6774 7472 9.635520 AATACTCATTTTTCATTCTGCTCTTTG 57.364 29.630 0.00 0.00 0.00 2.77
6796 7495 6.622896 GCCAATGACACTTCCACAGTAAATAC 60.623 42.308 0.00 0.00 32.76 1.89
6799 7498 3.568007 GCCAATGACACTTCCACAGTAAA 59.432 43.478 0.00 0.00 32.76 2.01
6800 7499 3.146066 GCCAATGACACTTCCACAGTAA 58.854 45.455 0.00 0.00 32.76 2.24
6801 7500 2.105649 TGCCAATGACACTTCCACAGTA 59.894 45.455 0.00 0.00 32.76 2.74
6803 7502 1.538512 CTGCCAATGACACTTCCACAG 59.461 52.381 0.00 0.00 0.00 3.66
6804 7503 1.142667 TCTGCCAATGACACTTCCACA 59.857 47.619 0.00 0.00 0.00 4.17
6805 7504 1.896220 TCTGCCAATGACACTTCCAC 58.104 50.000 0.00 0.00 0.00 4.02
6806 7505 2.224843 ACATCTGCCAATGACACTTCCA 60.225 45.455 2.69 0.00 0.00 3.53
6807 7506 2.421424 GACATCTGCCAATGACACTTCC 59.579 50.000 2.69 0.00 0.00 3.46
6808 7507 3.076621 TGACATCTGCCAATGACACTTC 58.923 45.455 2.69 0.00 0.00 3.01
6809 7508 3.144657 TGACATCTGCCAATGACACTT 57.855 42.857 2.69 0.00 0.00 3.16
6810 7509 2.865119 TGACATCTGCCAATGACACT 57.135 45.000 2.69 0.00 0.00 3.55
6811 7510 3.011818 TGATGACATCTGCCAATGACAC 58.988 45.455 16.25 0.33 34.90 3.67
6812 7511 3.353370 TGATGACATCTGCCAATGACA 57.647 42.857 16.25 3.28 36.15 3.58
6813 7512 5.530171 AGTTATGATGACATCTGCCAATGAC 59.470 40.000 16.25 7.94 37.87 3.06
6814 7513 5.529800 CAGTTATGATGACATCTGCCAATGA 59.470 40.000 16.25 0.00 37.87 2.57
6815 7514 5.529800 TCAGTTATGATGACATCTGCCAATG 59.470 40.000 16.25 8.40 37.87 2.82
6816 7515 5.687780 TCAGTTATGATGACATCTGCCAAT 58.312 37.500 16.25 4.03 37.87 3.16
6817 7516 5.101648 TCAGTTATGATGACATCTGCCAA 57.898 39.130 16.25 2.94 37.87 4.52
6818 7517 4.758773 TCAGTTATGATGACATCTGCCA 57.241 40.909 16.25 0.00 37.87 4.92
6819 7518 6.261603 TGATTTCAGTTATGATGACATCTGCC 59.738 38.462 16.25 2.62 35.72 4.85
6820 7519 7.255491 TGATTTCAGTTATGATGACATCTGC 57.745 36.000 16.25 4.45 35.72 4.26
6840 7539 8.850156 GCCTCAATTACCACAGTAAATATGATT 58.150 33.333 0.00 0.00 41.68 2.57
6841 7540 7.173218 CGCCTCAATTACCACAGTAAATATGAT 59.827 37.037 0.00 0.00 41.68 2.45
6842 7541 6.481976 CGCCTCAATTACCACAGTAAATATGA 59.518 38.462 0.00 0.00 41.68 2.15
6843 7542 6.658831 CGCCTCAATTACCACAGTAAATATG 58.341 40.000 0.00 0.00 41.68 1.78
6844 7543 5.238650 GCGCCTCAATTACCACAGTAAATAT 59.761 40.000 0.00 0.00 41.68 1.28
6845 7544 4.573201 GCGCCTCAATTACCACAGTAAATA 59.427 41.667 0.00 0.00 41.68 1.40
6846 7545 3.377172 GCGCCTCAATTACCACAGTAAAT 59.623 43.478 0.00 0.00 41.68 1.40
6847 7546 2.745281 GCGCCTCAATTACCACAGTAAA 59.255 45.455 0.00 0.00 41.68 2.01
6848 7547 2.027561 AGCGCCTCAATTACCACAGTAA 60.028 45.455 2.29 0.00 42.54 2.24
6852 7551 0.323302 TGAGCGCCTCAATTACCACA 59.677 50.000 2.29 0.00 37.57 4.17
6853 7552 1.009829 CTGAGCGCCTCAATTACCAC 58.990 55.000 2.29 0.00 40.18 4.16
6854 7553 0.613260 ACTGAGCGCCTCAATTACCA 59.387 50.000 2.29 0.00 40.18 3.25
6855 7554 1.739067 AACTGAGCGCCTCAATTACC 58.261 50.000 2.29 0.00 40.18 2.85
6856 7555 2.159517 CCAAACTGAGCGCCTCAATTAC 60.160 50.000 2.29 0.00 40.18 1.89
6857 7556 2.083774 CCAAACTGAGCGCCTCAATTA 58.916 47.619 2.29 0.00 40.18 1.40
6903 7613 8.850156 GCCTCAATTACCACAGTAAATATGATT 58.150 33.333 0.00 0.00 41.68 2.57
6904 7614 7.173218 CGCCTCAATTACCACAGTAAATATGAT 59.827 37.037 0.00 0.00 41.68 2.45
6905 7615 6.481976 CGCCTCAATTACCACAGTAAATATGA 59.518 38.462 0.00 0.00 41.68 2.15
6906 7616 6.658831 CGCCTCAATTACCACAGTAAATATG 58.341 40.000 0.00 0.00 41.68 1.78
6907 7617 5.238650 GCGCCTCAATTACCACAGTAAATAT 59.761 40.000 0.00 0.00 41.68 1.28
6908 7618 4.573201 GCGCCTCAATTACCACAGTAAATA 59.427 41.667 0.00 0.00 41.68 1.40
6909 7619 3.377172 GCGCCTCAATTACCACAGTAAAT 59.623 43.478 0.00 0.00 41.68 1.40
6910 7620 2.745281 GCGCCTCAATTACCACAGTAAA 59.255 45.455 0.00 0.00 41.68 2.01
6911 7621 2.027561 AGCGCCTCAATTACCACAGTAA 60.028 45.455 2.29 0.00 42.54 2.24
6912 7622 1.553248 AGCGCCTCAATTACCACAGTA 59.447 47.619 2.29 0.00 0.00 2.74
6913 7623 0.324943 AGCGCCTCAATTACCACAGT 59.675 50.000 2.29 0.00 0.00 3.55
6914 7624 1.009829 GAGCGCCTCAATTACCACAG 58.990 55.000 2.29 0.00 0.00 3.66
6915 7625 0.323302 TGAGCGCCTCAATTACCACA 59.677 50.000 2.29 0.00 37.57 4.17
6916 7626 1.009829 CTGAGCGCCTCAATTACCAC 58.990 55.000 2.29 0.00 40.18 4.16
6917 7627 0.613260 ACTGAGCGCCTCAATTACCA 59.387 50.000 2.29 0.00 40.18 3.25
6918 7628 1.739067 AACTGAGCGCCTCAATTACC 58.261 50.000 2.29 0.00 40.18 2.85
6919 7629 2.159517 CCAAACTGAGCGCCTCAATTAC 60.160 50.000 2.29 0.00 40.18 1.89
6920 7630 2.083774 CCAAACTGAGCGCCTCAATTA 58.916 47.619 2.29 0.00 40.18 1.40
6921 7631 0.883833 CCAAACTGAGCGCCTCAATT 59.116 50.000 2.29 0.20 40.18 2.32
6922 7632 1.589716 GCCAAACTGAGCGCCTCAAT 61.590 55.000 2.29 0.00 40.18 2.57
6923 7633 2.260869 GCCAAACTGAGCGCCTCAA 61.261 57.895 2.29 0.00 40.18 3.02
6924 7634 2.669569 GCCAAACTGAGCGCCTCA 60.670 61.111 2.29 6.58 38.25 3.86
6925 7635 3.435186 GGCCAAACTGAGCGCCTC 61.435 66.667 2.29 1.22 38.41 4.70
6929 7639 3.950794 TAGGCGGCCAAACTGAGCG 62.951 63.158 23.09 0.00 0.00 5.03
6930 7640 1.032114 AATAGGCGGCCAAACTGAGC 61.032 55.000 23.09 0.00 0.00 4.26
6931 7641 1.133025 CAAATAGGCGGCCAAACTGAG 59.867 52.381 23.09 0.54 0.00 3.35
6932 7642 1.173043 CAAATAGGCGGCCAAACTGA 58.827 50.000 23.09 0.00 0.00 3.41
6933 7643 0.173255 CCAAATAGGCGGCCAAACTG 59.827 55.000 23.09 12.46 0.00 3.16
6934 7644 0.970427 CCCAAATAGGCGGCCAAACT 60.970 55.000 23.09 2.24 35.39 2.66
6935 7645 1.254975 ACCCAAATAGGCGGCCAAAC 61.255 55.000 23.09 0.00 35.39 2.93
6936 7646 0.331954 TACCCAAATAGGCGGCCAAA 59.668 50.000 23.09 9.35 35.39 3.28
6937 7647 0.553819 ATACCCAAATAGGCGGCCAA 59.446 50.000 23.09 0.00 35.39 4.52
6938 7648 0.179004 CATACCCAAATAGGCGGCCA 60.179 55.000 23.09 7.74 35.39 5.36
6939 7649 0.109723 TCATACCCAAATAGGCGGCC 59.890 55.000 12.11 12.11 35.39 6.13
6940 7650 2.200373 ATCATACCCAAATAGGCGGC 57.800 50.000 0.00 0.00 35.39 6.53
6941 7651 4.695455 CAGTTATCATACCCAAATAGGCGG 59.305 45.833 0.00 0.00 35.39 6.13
6942 7652 5.547465 TCAGTTATCATACCCAAATAGGCG 58.453 41.667 0.00 0.00 35.39 5.52
6943 7653 6.998673 AGTTCAGTTATCATACCCAAATAGGC 59.001 38.462 0.00 0.00 35.39 3.93
6944 7654 8.210946 TGAGTTCAGTTATCATACCCAAATAGG 58.789 37.037 0.00 0.00 37.03 2.57
6945 7655 9.784531 ATGAGTTCAGTTATCATACCCAAATAG 57.215 33.333 0.00 0.00 32.01 1.73
6999 7709 9.453572 ACAATTCATGTATGTGTCAATAACTCT 57.546 29.630 0.00 0.00 41.63 3.24
7000 7710 9.494479 CACAATTCATGTATGTGTCAATAACTC 57.506 33.333 15.40 0.00 41.46 3.01
7011 7721 4.321899 GCAACCCACACAATTCATGTATGT 60.322 41.667 0.00 0.00 41.46 2.29
7012 7722 4.175516 GCAACCCACACAATTCATGTATG 58.824 43.478 0.00 0.00 41.46 2.39
7013 7723 3.195396 GGCAACCCACACAATTCATGTAT 59.805 43.478 0.00 0.00 41.46 2.29
7014 7724 2.560542 GGCAACCCACACAATTCATGTA 59.439 45.455 0.00 0.00 41.46 2.29
7015 7725 1.344114 GGCAACCCACACAATTCATGT 59.656 47.619 0.00 0.00 45.34 3.21
7016 7726 2.083167 GGCAACCCACACAATTCATG 57.917 50.000 0.00 0.00 0.00 3.07
7044 7754 9.921637 CTGTTTTTAACTTAAGCCCAATGATAA 57.078 29.630 1.29 0.00 0.00 1.75
7045 7755 9.303116 TCTGTTTTTAACTTAAGCCCAATGATA 57.697 29.630 1.29 0.00 0.00 2.15
7046 7756 8.189119 TCTGTTTTTAACTTAAGCCCAATGAT 57.811 30.769 1.29 0.00 0.00 2.45
7047 7757 7.504238 TCTCTGTTTTTAACTTAAGCCCAATGA 59.496 33.333 1.29 0.00 0.00 2.57
7048 7758 7.657336 TCTCTGTTTTTAACTTAAGCCCAATG 58.343 34.615 1.29 0.00 0.00 2.82
7049 7759 7.833285 TCTCTGTTTTTAACTTAAGCCCAAT 57.167 32.000 1.29 0.00 0.00 3.16
7050 7760 7.504238 TGATCTCTGTTTTTAACTTAAGCCCAA 59.496 33.333 1.29 0.00 0.00 4.12
7051 7761 7.001674 TGATCTCTGTTTTTAACTTAAGCCCA 58.998 34.615 1.29 0.00 0.00 5.36
7052 7762 7.175119 AGTGATCTCTGTTTTTAACTTAAGCCC 59.825 37.037 1.29 0.00 0.00 5.19
7053 7763 8.100508 AGTGATCTCTGTTTTTAACTTAAGCC 57.899 34.615 1.29 0.00 0.00 4.35
7077 7787 2.414293 CCTTCACGGTCACTTACGAGAG 60.414 54.545 0.00 0.00 31.86 3.20
7078 7788 1.538512 CCTTCACGGTCACTTACGAGA 59.461 52.381 0.00 0.00 0.00 4.04
7079 7789 1.402456 CCCTTCACGGTCACTTACGAG 60.402 57.143 0.00 0.00 0.00 4.18
7080 7790 0.599558 CCCTTCACGGTCACTTACGA 59.400 55.000 0.00 0.00 0.00 3.43
7081 7791 0.599558 TCCCTTCACGGTCACTTACG 59.400 55.000 0.00 0.00 0.00 3.18
7082 7792 3.000727 CAATCCCTTCACGGTCACTTAC 58.999 50.000 0.00 0.00 0.00 2.34
7083 7793 2.901192 TCAATCCCTTCACGGTCACTTA 59.099 45.455 0.00 0.00 0.00 2.24
7084 7794 1.697432 TCAATCCCTTCACGGTCACTT 59.303 47.619 0.00 0.00 0.00 3.16
7085 7795 1.002087 GTCAATCCCTTCACGGTCACT 59.998 52.381 0.00 0.00 0.00 3.41
7086 7796 1.270625 TGTCAATCCCTTCACGGTCAC 60.271 52.381 0.00 0.00 0.00 3.67
7087 7797 1.052617 TGTCAATCCCTTCACGGTCA 58.947 50.000 0.00 0.00 0.00 4.02
7088 7798 1.804748 GTTGTCAATCCCTTCACGGTC 59.195 52.381 0.00 0.00 0.00 4.79
7089 7799 1.544759 GGTTGTCAATCCCTTCACGGT 60.545 52.381 0.00 0.00 0.00 4.83
7090 7800 1.165270 GGTTGTCAATCCCTTCACGG 58.835 55.000 0.00 0.00 0.00 4.94
7091 7801 1.165270 GGGTTGTCAATCCCTTCACG 58.835 55.000 3.15 0.00 40.48 4.35
7092 7802 1.545841 GGGGTTGTCAATCCCTTCAC 58.454 55.000 24.72 0.00 43.00 3.18
7097 7807 1.763968 GCTTAGGGGTTGTCAATCCC 58.236 55.000 24.64 24.64 42.73 3.85
7098 7808 1.339727 ACGCTTAGGGGTTGTCAATCC 60.340 52.381 6.29 6.29 34.95 3.01
7099 7809 2.109425 ACGCTTAGGGGTTGTCAATC 57.891 50.000 0.55 0.00 34.95 2.67
7100 7810 2.579410 AACGCTTAGGGGTTGTCAAT 57.421 45.000 6.49 0.00 44.93 2.57
7107 7817 1.602605 GCAACCAACGCTTAGGGGT 60.603 57.895 0.55 0.00 40.41 4.95
7108 7818 2.686816 CGCAACCAACGCTTAGGGG 61.687 63.158 0.55 0.00 0.00 4.79
7109 7819 1.635663 CTCGCAACCAACGCTTAGGG 61.636 60.000 0.00 0.00 0.00 3.53
7110 7820 0.949105 ACTCGCAACCAACGCTTAGG 60.949 55.000 0.00 0.00 0.00 2.69
7111 7821 0.865769 AACTCGCAACCAACGCTTAG 59.134 50.000 0.00 0.00 0.00 2.18
7112 7822 0.584396 CAACTCGCAACCAACGCTTA 59.416 50.000 0.00 0.00 0.00 3.09
7113 7823 1.355210 CAACTCGCAACCAACGCTT 59.645 52.632 0.00 0.00 0.00 4.68
7114 7824 3.022287 CAACTCGCAACCAACGCT 58.978 55.556 0.00 0.00 0.00 5.07
7115 7825 1.837538 TAGCAACTCGCAACCAACGC 61.838 55.000 0.00 0.00 46.13 4.84
7116 7826 0.110823 GTAGCAACTCGCAACCAACG 60.111 55.000 0.00 0.00 46.13 4.10
7117 7827 0.237498 GGTAGCAACTCGCAACCAAC 59.763 55.000 0.00 0.00 46.13 3.77
7118 7828 1.225376 CGGTAGCAACTCGCAACCAA 61.225 55.000 0.00 0.00 46.13 3.67
7119 7829 1.666553 CGGTAGCAACTCGCAACCA 60.667 57.895 0.00 0.00 46.13 3.67
7120 7830 1.226030 AACGGTAGCAACTCGCAACC 61.226 55.000 0.00 0.00 46.13 3.77
7121 7831 0.584876 AAACGGTAGCAACTCGCAAC 59.415 50.000 0.00 0.00 46.13 4.17
7122 7832 1.003331 CAAAACGGTAGCAACTCGCAA 60.003 47.619 0.00 0.00 46.13 4.85
7123 7833 0.584396 CAAAACGGTAGCAACTCGCA 59.416 50.000 0.00 0.00 46.13 5.10
7124 7834 0.584876 ACAAAACGGTAGCAACTCGC 59.415 50.000 0.00 0.00 42.91 5.03
7125 7835 1.659211 GCACAAAACGGTAGCAACTCG 60.659 52.381 0.00 0.00 0.00 4.18
7126 7836 1.332375 TGCACAAAACGGTAGCAACTC 59.668 47.619 0.00 0.00 31.42 3.01
7127 7837 1.333619 CTGCACAAAACGGTAGCAACT 59.666 47.619 0.00 0.00 34.45 3.16
7128 7838 1.599419 CCTGCACAAAACGGTAGCAAC 60.599 52.381 0.00 0.00 34.45 4.17
7129 7839 0.665835 CCTGCACAAAACGGTAGCAA 59.334 50.000 0.00 0.00 34.45 3.91
7130 7840 0.464735 ACCTGCACAAAACGGTAGCA 60.465 50.000 0.00 0.00 0.00 3.49
7131 7841 1.196127 GTACCTGCACAAAACGGTAGC 59.804 52.381 0.75 0.00 33.02 3.58
7132 7842 1.458064 CGTACCTGCACAAAACGGTAG 59.542 52.381 0.75 0.00 33.02 3.18
7133 7843 1.068281 TCGTACCTGCACAAAACGGTA 59.932 47.619 0.00 0.00 34.47 4.02
7134 7844 0.179078 TCGTACCTGCACAAAACGGT 60.179 50.000 0.00 0.00 34.47 4.83
7135 7845 0.511221 CTCGTACCTGCACAAAACGG 59.489 55.000 6.36 0.00 34.47 4.44
7136 7846 0.511221 CCTCGTACCTGCACAAAACG 59.489 55.000 0.00 0.00 34.99 3.60
7137 7847 0.872388 CCCTCGTACCTGCACAAAAC 59.128 55.000 0.00 0.00 0.00 2.43
7138 7848 0.759959 TCCCTCGTACCTGCACAAAA 59.240 50.000 0.00 0.00 0.00 2.44
7139 7849 0.034337 GTCCCTCGTACCTGCACAAA 59.966 55.000 0.00 0.00 0.00 2.83
7140 7850 0.830444 AGTCCCTCGTACCTGCACAA 60.830 55.000 0.00 0.00 0.00 3.33
7141 7851 0.830444 AAGTCCCTCGTACCTGCACA 60.830 55.000 0.00 0.00 0.00 4.57
7142 7852 0.389948 CAAGTCCCTCGTACCTGCAC 60.390 60.000 0.00 0.00 0.00 4.57
7143 7853 1.972198 CAAGTCCCTCGTACCTGCA 59.028 57.895 0.00 0.00 0.00 4.41
7144 7854 1.448013 GCAAGTCCCTCGTACCTGC 60.448 63.158 0.00 0.00 0.00 4.85
7145 7855 1.153823 CGCAAGTCCCTCGTACCTG 60.154 63.158 0.00 0.00 0.00 4.00
7146 7856 3.003113 GCGCAAGTCCCTCGTACCT 62.003 63.158 0.30 0.00 41.68 3.08
7147 7857 2.508663 GCGCAAGTCCCTCGTACC 60.509 66.667 0.30 0.00 41.68 3.34
7148 7858 2.879462 CGCGCAAGTCCCTCGTAC 60.879 66.667 8.75 0.00 41.68 3.67
7149 7859 3.367743 ACGCGCAAGTCCCTCGTA 61.368 61.111 5.73 0.00 41.68 3.43
7151 7861 4.717629 TCACGCGCAAGTCCCTCG 62.718 66.667 5.73 0.00 41.68 4.63
7152 7862 3.112709 GTCACGCGCAAGTCCCTC 61.113 66.667 5.73 0.00 41.68 4.30
7153 7863 4.681978 GGTCACGCGCAAGTCCCT 62.682 66.667 5.73 0.00 41.68 4.20
7154 7864 4.681978 AGGTCACGCGCAAGTCCC 62.682 66.667 5.73 0.00 41.68 4.46
7155 7865 3.112709 GAGGTCACGCGCAAGTCC 61.113 66.667 5.73 6.21 41.68 3.85
7156 7866 2.209064 TAGGAGGTCACGCGCAAGTC 62.209 60.000 5.73 0.00 41.68 3.01
7157 7867 2.273179 TAGGAGGTCACGCGCAAGT 61.273 57.895 5.73 0.00 41.68 3.16
7158 7868 1.805945 GTAGGAGGTCACGCGCAAG 60.806 63.158 5.73 0.00 43.44 4.01
7159 7869 2.260434 GTAGGAGGTCACGCGCAA 59.740 61.111 5.73 0.00 0.00 4.85
7160 7870 2.675423 AGTAGGAGGTCACGCGCA 60.675 61.111 5.73 0.00 0.00 6.09
7161 7871 2.202623 CAGTAGGAGGTCACGCGC 60.203 66.667 5.73 0.00 0.00 6.86
7162 7872 2.044555 TCCAGTAGGAGGTCACGCG 61.045 63.158 3.53 3.53 39.61 6.01
7163 7873 4.013702 TCCAGTAGGAGGTCACGC 57.986 61.111 0.00 0.00 39.61 5.34
7172 7882 5.131142 AGAACCAAGGTATCAATCCAGTAGG 59.869 44.000 0.00 0.00 0.00 3.18
7173 7883 6.127054 TGAGAACCAAGGTATCAATCCAGTAG 60.127 42.308 4.99 0.00 0.00 2.57
7174 7884 5.724370 TGAGAACCAAGGTATCAATCCAGTA 59.276 40.000 4.99 0.00 0.00 2.74
7175 7885 4.536090 TGAGAACCAAGGTATCAATCCAGT 59.464 41.667 4.99 0.00 0.00 4.00
7176 7886 5.102953 TGAGAACCAAGGTATCAATCCAG 57.897 43.478 4.99 0.00 0.00 3.86
7177 7887 5.512942 TTGAGAACCAAGGTATCAATCCA 57.487 39.130 13.02 0.00 32.60 3.41
7178 7888 6.834168 TTTTGAGAACCAAGGTATCAATCC 57.166 37.500 16.11 0.00 35.41 3.01
7179 7889 7.809806 CAGTTTTTGAGAACCAAGGTATCAATC 59.190 37.037 16.11 11.55 35.41 2.67
7180 7890 7.505585 TCAGTTTTTGAGAACCAAGGTATCAAT 59.494 33.333 16.11 4.02 35.41 2.57
7181 7891 6.831353 TCAGTTTTTGAGAACCAAGGTATCAA 59.169 34.615 13.02 13.02 35.94 2.57
7182 7892 6.361433 TCAGTTTTTGAGAACCAAGGTATCA 58.639 36.000 0.00 0.00 35.94 2.15
7183 7893 6.877611 TCAGTTTTTGAGAACCAAGGTATC 57.122 37.500 0.00 0.00 35.94 2.24
7195 7905 7.834316 GCGTAAGTATTTCCCTCAGTTTTTGAG 60.834 40.741 0.00 0.00 46.36 3.02
7196 7906 6.072893 GCGTAAGTATTTCCCTCAGTTTTTGA 60.073 38.462 0.00 0.00 41.68 2.69
7197 7907 6.072673 AGCGTAAGTATTTCCCTCAGTTTTTG 60.073 38.462 0.00 0.00 41.68 2.44
7198 7908 6.002082 AGCGTAAGTATTTCCCTCAGTTTTT 58.998 36.000 0.00 0.00 41.68 1.94
7199 7909 5.557866 AGCGTAAGTATTTCCCTCAGTTTT 58.442 37.500 0.00 0.00 41.68 2.43
7200 7910 5.161943 AGCGTAAGTATTTCCCTCAGTTT 57.838 39.130 0.00 0.00 41.68 2.66
7201 7911 4.820894 AGCGTAAGTATTTCCCTCAGTT 57.179 40.909 0.00 0.00 41.68 3.16
7202 7912 4.954826 AGTAGCGTAAGTATTTCCCTCAGT 59.045 41.667 0.00 0.00 41.68 3.41
7203 7913 5.163540 ACAGTAGCGTAAGTATTTCCCTCAG 60.164 44.000 0.00 0.00 41.68 3.35
7204 7914 4.708421 ACAGTAGCGTAAGTATTTCCCTCA 59.292 41.667 0.00 0.00 41.68 3.86
7205 7915 5.041940 CACAGTAGCGTAAGTATTTCCCTC 58.958 45.833 0.00 0.00 41.68 4.30
7206 7916 4.679905 GCACAGTAGCGTAAGTATTTCCCT 60.680 45.833 0.00 0.00 41.68 4.20
7207 7917 3.554731 GCACAGTAGCGTAAGTATTTCCC 59.445 47.826 0.00 0.00 41.68 3.97
7208 7918 4.267928 CAGCACAGTAGCGTAAGTATTTCC 59.732 45.833 0.00 0.00 40.15 3.13
7209 7919 4.259850 GCAGCACAGTAGCGTAAGTATTTC 60.260 45.833 0.00 0.00 40.15 2.17
7210 7920 3.617263 GCAGCACAGTAGCGTAAGTATTT 59.383 43.478 0.00 0.00 40.15 1.40
7211 7921 3.187700 GCAGCACAGTAGCGTAAGTATT 58.812 45.455 0.00 0.00 40.15 1.89
7212 7922 2.165641 TGCAGCACAGTAGCGTAAGTAT 59.834 45.455 0.00 0.00 40.15 2.12
7213 7923 1.542472 TGCAGCACAGTAGCGTAAGTA 59.458 47.619 0.00 0.00 40.15 2.24
7214 7924 0.317160 TGCAGCACAGTAGCGTAAGT 59.683 50.000 0.00 0.00 40.15 2.24
7215 7925 1.590238 GATGCAGCACAGTAGCGTAAG 59.410 52.381 0.00 0.00 40.15 2.34
7216 7926 1.067213 TGATGCAGCACAGTAGCGTAA 60.067 47.619 0.00 0.00 40.15 3.18
7217 7927 0.530288 TGATGCAGCACAGTAGCGTA 59.470 50.000 0.00 0.00 40.15 4.42
7218 7928 1.016130 GTGATGCAGCACAGTAGCGT 61.016 55.000 29.13 0.00 38.63 5.07
7219 7929 1.699656 GGTGATGCAGCACAGTAGCG 61.700 60.000 33.62 0.00 40.52 4.26
7220 7930 1.372087 GGGTGATGCAGCACAGTAGC 61.372 60.000 33.62 17.32 40.52 3.58
7221 7931 0.745845 GGGGTGATGCAGCACAGTAG 60.746 60.000 33.62 0.00 40.52 2.57
7222 7932 1.299648 GGGGTGATGCAGCACAGTA 59.700 57.895 33.62 0.00 40.52 2.74
7223 7933 2.034687 GGGGTGATGCAGCACAGT 59.965 61.111 33.62 0.00 40.52 3.55
7224 7934 2.753043 GGGGGTGATGCAGCACAG 60.753 66.667 33.62 0.00 36.95 3.66
7225 7935 3.259314 AGGGGGTGATGCAGCACA 61.259 61.111 33.62 11.85 36.95 4.57
7226 7936 2.439156 GAGGGGGTGATGCAGCAC 60.439 66.667 26.53 26.53 38.05 4.40
7227 7937 3.731728 GGAGGGGGTGATGCAGCA 61.732 66.667 0.00 0.00 33.07 4.41
7228 7938 3.412624 GAGGAGGGGGTGATGCAGC 62.413 68.421 0.00 0.00 0.00 5.25
7229 7939 1.277580 AAGAGGAGGGGGTGATGCAG 61.278 60.000 0.00 0.00 0.00 4.41
7230 7940 1.229951 AAGAGGAGGGGGTGATGCA 60.230 57.895 0.00 0.00 0.00 3.96
7231 7941 1.529309 GAAGAGGAGGGGGTGATGC 59.471 63.158 0.00 0.00 0.00 3.91
7232 7942 1.690219 CCGAAGAGGAGGGGGTGATG 61.690 65.000 0.00 0.00 45.00 3.07
7233 7943 1.383248 CCGAAGAGGAGGGGGTGAT 60.383 63.158 0.00 0.00 45.00 3.06
7234 7944 2.038975 CCGAAGAGGAGGGGGTGA 59.961 66.667 0.00 0.00 45.00 4.02
7235 7945 2.038975 TCCGAAGAGGAGGGGGTG 59.961 66.667 0.00 0.00 45.98 4.61
7243 7953 1.798813 CGTTGGTTTTCTCCGAAGAGG 59.201 52.381 0.00 0.00 40.83 3.69
7244 7954 1.194772 GCGTTGGTTTTCTCCGAAGAG 59.805 52.381 0.00 0.00 41.93 2.85
7245 7955 1.202604 AGCGTTGGTTTTCTCCGAAGA 60.203 47.619 0.00 0.00 0.00 2.87
7246 7956 1.226746 AGCGTTGGTTTTCTCCGAAG 58.773 50.000 0.00 0.00 0.00 3.79
7247 7957 2.409975 CTAGCGTTGGTTTTCTCCGAA 58.590 47.619 0.00 0.00 0.00 4.30
7248 7958 1.938016 GCTAGCGTTGGTTTTCTCCGA 60.938 52.381 0.00 0.00 0.00 4.55
7249 7959 0.442699 GCTAGCGTTGGTTTTCTCCG 59.557 55.000 0.00 0.00 0.00 4.63
7250 7960 1.732809 GAGCTAGCGTTGGTTTTCTCC 59.267 52.381 9.55 0.00 0.00 3.71
7251 7961 1.390463 CGAGCTAGCGTTGGTTTTCTC 59.610 52.381 9.55 0.00 0.00 2.87
7252 7962 1.000506 TCGAGCTAGCGTTGGTTTTCT 59.999 47.619 9.55 0.00 0.00 2.52
7253 7963 1.390463 CTCGAGCTAGCGTTGGTTTTC 59.610 52.381 9.55 0.00 0.00 2.29
7254 7964 1.000506 TCTCGAGCTAGCGTTGGTTTT 59.999 47.619 7.81 0.00 0.00 2.43
7255 7965 0.601558 TCTCGAGCTAGCGTTGGTTT 59.398 50.000 7.81 0.00 0.00 3.27
7256 7966 0.109226 GTCTCGAGCTAGCGTTGGTT 60.109 55.000 7.81 0.00 0.00 3.67
7257 7967 1.507174 GTCTCGAGCTAGCGTTGGT 59.493 57.895 7.81 0.00 0.00 3.67
7258 7968 1.583967 CGTCTCGAGCTAGCGTTGG 60.584 63.158 7.81 1.83 0.00 3.77
7259 7969 0.372679 TACGTCTCGAGCTAGCGTTG 59.627 55.000 21.68 3.20 37.05 4.10
7260 7970 0.651551 CTACGTCTCGAGCTAGCGTT 59.348 55.000 21.68 0.00 37.05 4.84
7261 7971 2.299562 CTACGTCTCGAGCTAGCGT 58.700 57.895 20.81 20.81 39.23 5.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.