AutoCloner

Multiple sequence alignment - TraesCS2A01G346000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G346000	chr2A	100.000	3878	0	0	1	3878	584509774	584513651	0.000000e+00	7162.0
1	TraesCS2A01G346000	chr2D	95.813	2866	81	16	1040	3878	440767076	440769929	0.000000e+00	4591.0
2	TraesCS2A01G346000	chr2D	97.663	813	19	0	1021	1833	185367959	185368771	0.000000e+00	1397.0
3	TraesCS2A01G346000	chr2D	92.231	1004	47	14	1	985	440765601	440766592	0.000000e+00	1393.0
4	TraesCS2A01G346000	chr2D	85.667	607	80	6	1071	1672	440633990	440634594	1.970000e-177	632.0
5	TraesCS2A01G346000	chr2B	95.493	2485	95	8	1029	3509	518739788	518742259	0.000000e+00	3952.0
6	TraesCS2A01G346000	chr2B	94.955	337	15	2	596	932	518739002	518739336	9.540000e-146	527.0
7	TraesCS2A01G346000	chr2B	91.899	358	17	4	3529	3878	518742419	518742772	1.250000e-134	490.0
8	TraesCS2A01G346000	chr2B	91.667	48	1	3	3336	3380	572592428	572592381	3.230000e-06	63.9
9	TraesCS2A01G346000	chr6D	97.786	813	17	1	1021	1833	100570417	100569606	0.000000e+00	1400.0
10	TraesCS2A01G346000	chr6D	97.540	813	20	0	1021	1833	216836487	216837299	0.000000e+00	1391.0
11	TraesCS2A01G346000	chr6D	89.236	576	39	6	959	1533	67037454	67036901	0.000000e+00	699.0
12	TraesCS2A01G346000	chr3D	97.663	813	19	0	1021	1833	241044646	241043834	0.000000e+00	1397.0
13	TraesCS2A01G346000	chr3D	90.986	588	33	9	959	1545	456355707	456355139	0.000000e+00	774.0
14	TraesCS2A01G346000	chr3D	95.000	40	2	0	3333	3372	595230733	595230772	3.230000e-06	63.9
15	TraesCS2A01G346000	chr7D	96.421	475	16	1	1359	1833	255422881	255423354	0.000000e+00	782.0
16	TraesCS2A01G346000	chr6A	100.000	36	0	0	3336	3371	441426956	441426991	2.500000e-07	67.6
17	TraesCS2A01G346000	chr6B	100.000	35	0	0	3336	3370	470123452	470123486	8.990000e-07	65.8
18	TraesCS2A01G346000	chr6B	100.000	30	0	0	3430	3459	10714899	10714870	5.410000e-04	56.5
19	TraesCS2A01G346000	chr5B	95.000	40	2	0	3333	3372	655296988	655296949	3.230000e-06	63.9
20	TraesCS2A01G346000	chr4D	97.297	37	1	0	3336	3372	85586296	85586332	3.230000e-06	63.9
21	TraesCS2A01G346000	chr4A	84.058	69	7	4	1522	1588	454122292	454122358	3.230000e-06	63.9
22	TraesCS2A01G346000	chr1B	95.000	40	2	0	3333	3372	625095340	625095301	3.230000e-06	63.9
23	TraesCS2A01G346000	chr7B	100.000	29	0	0	3430	3458	69587421	69587393	2.000000e-03	54.7

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G346000	chr2A	584509774	584513651	3877	False	7162.000000	7162	100.000000	1	3878	1	chr2A.!!$F1	3877
1	TraesCS2A01G346000	chr2D	440765601	440769929	4328	False	2992.000000	4591	94.022000	1	3878	2	chr2D.!!$F3	3877
2	TraesCS2A01G346000	chr2D	185367959	185368771	812	False	1397.000000	1397	97.663000	1021	1833	1	chr2D.!!$F1	812
3	TraesCS2A01G346000	chr2D	440633990	440634594	604	False	632.000000	632	85.667000	1071	1672	1	chr2D.!!$F2	601
4	TraesCS2A01G346000	chr2B	518739002	518742772	3770	False	1656.333333	3952	94.115667	596	3878	3	chr2B.!!$F1	3282
5	TraesCS2A01G346000	chr6D	100569606	100570417	811	True	1400.000000	1400	97.786000	1021	1833	1	chr6D.!!$R2	812
6	TraesCS2A01G346000	chr6D	216836487	216837299	812	False	1391.000000	1391	97.540000	1021	1833	1	chr6D.!!$F1	812
7	TraesCS2A01G346000	chr6D	67036901	67037454	553	True	699.000000	699	89.236000	959	1533	1	chr6D.!!$R1	574
8	TraesCS2A01G346000	chr3D	241043834	241044646	812	True	1397.000000	1397	97.663000	1021	1833	1	chr3D.!!$R1	812
9	TraesCS2A01G346000	chr3D	456355139	456355707	568	True	774.000000	774	90.986000	959	1545	1	chr3D.!!$R2	586

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
81	82	0.041090	AAGGGCCCGACATGGAATTT	59.959	50.0	18.44	42.00	1.82	F
362	366	0.301687	GATTGTCCACGCACGCATAG	59.698	55.0	0.00	0.00	2.23	F
584	598	0.591236	GCTGCGTTGTCGAAAGCAAA	60.591	50.0	0.00	44.48	3.68	F
2554	3007	0.038343	TGCGTTTGGGGTCGTACTAC	60.038	55.0	0.00	0.00	2.73	F

Position	MSA Position	Penalty	Sequence	TM	GC	End Stability	Orientation
2079	2532	1.004918	CTCCGACCTGAACGCCTTT	60.005	57.895	3.11	R
2313	2766	1.629861	TGGTGAATCTGTGGCATCTGA	59.370	47.619	3.27	R
2580	3033	1.073964	CATCACTTGACACAGAGGCG	58.926	55.000	5.52	R
3436	3898	0.561184	ATGGTACTCCCTCCGATCCA	59.439	55.000	3.41	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
36	37	3.319755	CGCCTACGTCAAGGAAAACTAA	58.680	45.455	8.62	0.00	39.15	2.24
37	38	3.930848	CGCCTACGTCAAGGAAAACTAAT	59.069	43.478	8.62	0.00	39.15	1.73
45	46	2.749621	CAAGGAAAACTAATGCCGCTCT	59.250	45.455	0.00	0.00	0.00	4.09
81	82	0.041090	AAGGGCCCGACATGGAATTT	59.959	50.000	18.44	0.00	42.00	1.82
87	88	3.186909	GCCCGACATGGAATTTTTAAGC	58.813	45.455	0.00	0.00	42.00	3.09
90	91	4.423732	CCGACATGGAATTTTTAAGCCTG	58.576	43.478	0.00	0.00	42.00	4.85
92	93	5.095490	CGACATGGAATTTTTAAGCCTGAC	58.905	41.667	0.00	0.00	0.00	3.51
119	120	7.474936	GCCCCTCCATTTGTTTCTAGTATCTAT	60.475	40.741	0.00	0.00	0.00	1.98
186	187	3.331150	GTTGTACATGTCCGGTGATGAA	58.669	45.455	18.52	4.05	0.00	2.57
216	217	3.183574	TGCTATGTCCGCGAATTTTATCG	59.816	43.478	8.23	0.00	45.41	2.92
221	222	3.619483	TGTCCGCGAATTTTATCGATGTT	59.381	39.130	8.23	0.00	45.48	2.71
231	232	8.638565	CGAATTTTATCGATGTTTGCTTCTTTT	58.361	29.630	8.54	0.00	45.48	2.27
243	244	5.920193	TTGCTTCTTTTTATGGCTGCTAT	57.080	34.783	3.43	3.43	0.00	2.97
250	251	8.518430	TTCTTTTTATGGCTGCTATGTTGATA	57.482	30.769	8.91	0.00	0.00	2.15
286	287	1.067706	CACGCTTTGCATGGATTTGGA	60.068	47.619	0.00	0.00	0.00	3.53
289	290	1.134610	GCTTTGCATGGATTTGGAGGG	60.135	52.381	0.00	0.00	0.00	4.30
290	291	1.483415	CTTTGCATGGATTTGGAGGGG	59.517	52.381	0.00	0.00	0.00	4.79
291	292	0.325484	TTGCATGGATTTGGAGGGGG	60.325	55.000	0.00	0.00	0.00	5.40
316	317	3.181451	GGAGTATGATGAGGATGGTTGCA	60.181	47.826	0.00	0.00	0.00	4.08
317	318	4.063689	GAGTATGATGAGGATGGTTGCAG	58.936	47.826	0.00	0.00	0.00	4.41
336	337	4.227300	TGCAGACACTAAAATATGAGGGGT	59.773	41.667	0.00	0.00	0.00	4.95
352	356	0.322546	GGGTGACTGGGATTGTCCAC	60.323	60.000	0.00	0.00	38.64	4.02
354	358	1.003839	TGACTGGGATTGTCCACGC	60.004	57.895	0.00	0.00	38.64	5.34
362	366	0.301687	GATTGTCCACGCACGCATAG	59.698	55.000	0.00	0.00	0.00	2.23
438	442	3.128349	GCAACTTCCACTGTTTCGTCTA	58.872	45.455	0.00	0.00	0.00	2.59
440	444	4.369182	CAACTTCCACTGTTTCGTCTAGT	58.631	43.478	0.00	0.00	0.00	2.57
443	447	4.281182	ACTTCCACTGTTTCGTCTAGTCAT	59.719	41.667	0.00	0.00	0.00	3.06
582	596	2.631428	GCTGCGTTGTCGAAAGCA	59.369	55.556	0.00	0.00	43.22	3.91
583	597	1.010125	GCTGCGTTGTCGAAAGCAA	60.010	52.632	0.00	0.00	44.48	3.91
584	598	0.591236	GCTGCGTTGTCGAAAGCAAA	60.591	50.000	0.00	0.00	44.48	3.68
621	635	4.067972	ACAGAAGAACAAAAGGCTACGA	57.932	40.909	0.00	0.00	0.00	3.43
622	636	4.642429	ACAGAAGAACAAAAGGCTACGAT	58.358	39.130	0.00	0.00	0.00	3.73
626	640	4.546829	AGAACAAAAGGCTACGATACCA	57.453	40.909	0.00	0.00	0.00	3.25
700	714	2.693069	CAATCACCACTCACTCAGACC	58.307	52.381	0.00	0.00	0.00	3.85
711	725	2.037367	TCAGACCCAGGGAGTCGG	59.963	66.667	14.54	0.45	39.31	4.79
813	827	1.419387	CCACTTCTCTCCCCATCCATC	59.581	57.143	0.00	0.00	0.00	3.51
814	828	1.419387	CACTTCTCTCCCCATCCATCC	59.581	57.143	0.00	0.00	0.00	3.51
815	829	1.010046	ACTTCTCTCCCCATCCATCCA	59.990	52.381	0.00	0.00	0.00	3.41
1181	1633	2.363172	GCCTCTCCTCCTGGACCAC	61.363	68.421	0.00	0.00	37.46	4.16
1707	2160	2.810486	CGGCCTCGGAATCGTTATC	58.190	57.895	0.00	0.00	37.69	1.75
1890	2343	4.012895	GCACACAACCGACTGGCG	62.013	66.667	0.00	0.00	39.70	5.69
1932	2385	1.134367	CCGATCGTCAAGGTCAAGCTA	59.866	52.381	15.09	0.00	0.00	3.32
2079	2532	1.829849	CACTCATGCCCTCTCTCAGAA	59.170	52.381	0.00	0.00	0.00	3.02
2190	2643	1.576421	GCTGCTGGTGTACAAGCAC	59.424	57.895	16.49	10.80	38.56	4.40
2313	2766	2.200930	TGGCTGCACCATGGGTTT	59.799	55.556	18.09	0.00	46.36	3.27
2466	2919	2.225117	CCCCTTCCTCAATGGTGACTTT	60.225	50.000	0.00	0.00	37.07	2.66
2548	3001	1.942677	TACATATGCGTTTGGGGTCG	58.057	50.000	1.58	0.00	0.00	4.79
2554	3007	0.038343	TGCGTTTGGGGTCGTACTAC	60.038	55.000	0.00	0.00	0.00	2.73
2835	3288	2.234661	TGATGTCTCGGAGCAGTTTGAT	59.765	45.455	0.00	0.00	0.00	2.57
2985	3443	2.969238	GCCGAGACATCCATGGCG	60.969	66.667	6.96	3.27	41.91	5.69
2990	3448	1.737838	GAGACATCCATGGCGAAACA	58.262	50.000	6.96	0.00	41.91	2.83
3276	3734	1.139163	CTTTGTTTGCATGGCCGTTC	58.861	50.000	0.00	0.00	0.00	3.95
3305	3763	5.047660	GCACCCTGTTATCTCCTACTCATAG	60.048	48.000	0.00	0.00	0.00	2.23
3389	3850	5.061311	GGTTTTGTGAATTTGCTCGATGATG	59.939	40.000	0.00	0.00	0.00	3.07
3411	3873	6.716934	TGTACCCTATCTCATTTGTCTCTC	57.283	41.667	0.00	0.00	0.00	3.20
3436	3898	9.300681	TCATTTTGGTCATCTGTCTCTTATTTT	57.699	29.630	0.00	0.00	0.00	1.82
3516	4104	9.788815	TCCCCTATCTCATTCTCATATATTTCA	57.211	33.333	0.00	0.00	0.00	2.69
3586	4189	5.324409	TCCTTCAACATACATTTCCAAGCT	58.676	37.500	0.00	0.00	0.00	3.74
3613	4216	7.284074	TGTGTCTTTGTCCTATACCTTTCAAA	58.716	34.615	0.00	0.00	0.00	2.69
3629	4232	5.510690	CCTTTCAAACCTTGGACCATTTACC	60.511	44.000	0.00	0.00	0.00	2.85
3638	4244	1.282157	GGACCATTTACCAGCCTCTGT	59.718	52.381	0.00	0.00	0.00	3.41
3648	4254	2.237392	ACCAGCCTCTGTTCTGTATTCC	59.763	50.000	0.00	0.00	0.00	3.01
3670	4276	3.848019	CGAAGACCGATTTTGAAGCATTG	59.152	43.478	0.00	0.00	41.76	2.82
3679	4285	5.497439	CGATTTTGAAGCATTGTAATGTGCG	60.497	40.000	6.48	0.00	45.69	5.34
3787	4396	4.162320	GCCCTCCTGCTATATTGTATGCTA	59.838	45.833	0.00	0.00	0.00	3.49

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
15	16	1.792006	AGTTTTCCTTGACGTAGGCG	58.208	50.000	0.00	0.00	44.93	5.52
25	26	3.010420	GAGAGCGGCATTAGTTTTCCTT	58.990	45.455	1.45	0.00	0.00	3.36
81	82	1.298667	GAGGGGCGTCAGGCTTAAA	59.701	57.895	0.00	0.00	42.94	1.52
87	88	1.750399	CAAATGGAGGGGCGTCAGG	60.750	63.158	0.00	0.00	0.00	3.86
90	91	0.526211	GAAACAAATGGAGGGGCGTC	59.474	55.000	0.00	0.00	0.00	5.19
92	93	2.017049	CTAGAAACAAATGGAGGGGCG	58.983	52.381	0.00	0.00	0.00	6.13
140	141	5.561919	CGAACCAAAAGAAATTCATCACCGA	60.562	40.000	0.00	0.00	0.00	4.69
186	187	1.196808	CGCGGACATAGCAACAAAAGT	59.803	47.619	0.00	0.00	34.19	2.66
216	217	5.163923	GCAGCCATAAAAAGAAGCAAACATC	60.164	40.000	0.00	0.00	0.00	3.06
221	222	5.185635	ACATAGCAGCCATAAAAAGAAGCAA	59.814	36.000	0.00	0.00	0.00	3.91
231	232	9.387257	CATAGATTATCAACATAGCAGCCATAA	57.613	33.333	0.00	0.00	0.00	1.90
250	251	8.620416	TGCAAAGCGTGATAAATTACATAGATT	58.380	29.630	0.00	0.00	0.00	2.40
271	272	1.570803	CCCCTCCAAATCCATGCAAA	58.429	50.000	0.00	0.00	0.00	3.68
272	273	0.325484	CCCCCTCCAAATCCATGCAA	60.325	55.000	0.00	0.00	0.00	4.08
291	292	1.912043	CCATCCTCATCATACTCCCCC	59.088	57.143	0.00	0.00	0.00	5.40
292	293	2.625639	ACCATCCTCATCATACTCCCC	58.374	52.381	0.00	0.00	0.00	4.81
293	294	3.808618	GCAACCATCCTCATCATACTCCC	60.809	52.174	0.00	0.00	0.00	4.30
294	295	3.181451	TGCAACCATCCTCATCATACTCC	60.181	47.826	0.00	0.00	0.00	3.85
316	317	5.726793	AGTCACCCCTCATATTTTAGTGTCT	59.273	40.000	0.00	0.00	0.00	3.41
317	318	5.817816	CAGTCACCCCTCATATTTTAGTGTC	59.182	44.000	0.00	0.00	0.00	3.67
336	337	1.003839	GCGTGGACAATCCCAGTCA	60.004	57.895	0.00	0.00	36.78	3.41
352	356	3.673956	TTGACCCCCTATGCGTGCG	62.674	63.158	0.00	0.00	0.00	5.34
354	358	1.762708	AATTTGACCCCCTATGCGTG	58.237	50.000	0.00	0.00	0.00	5.34
362	366	2.299013	GGACTTCACAAATTTGACCCCC	59.701	50.000	24.64	12.68	0.00	5.40
451	455	8.451908	AGTATAACAGAAGTGAAAGTTGCTTT	57.548	30.769	0.00	0.00	36.29	3.51
537	546	2.998772	TGCGCTCAGTTTGATGTTTTC	58.001	42.857	9.73	0.00	0.00	2.29
592	606	5.410067	CCTTTTGTTCTTCTGTTTCAGCAA	58.590	37.500	0.00	0.00	0.00	3.91
621	635	1.202770	GCTGGGCTCCGTAAATGGTAT	60.203	52.381	0.00	0.00	0.00	2.73
622	636	0.179468	GCTGGGCTCCGTAAATGGTA	59.821	55.000	0.00	0.00	0.00	3.25
626	640	0.759346	CTAGGCTGGGCTCCGTAAAT	59.241	55.000	0.00	0.00	0.00	1.40
700	714	4.087892	CCAGTGCCGACTCCCTGG	62.088	72.222	0.00	0.00	38.63	4.45
711	725	0.175989	GCTGACTAGTACCCCAGTGC	59.824	60.000	10.13	0.00	0.00	4.40
844	859	3.339093	GGGTGGGGAGGAGTTGGG	61.339	72.222	0.00	0.00	0.00	4.12
855	870	2.922503	GCTTTGGGTTGGGGTGGG	60.923	66.667	0.00	0.00	0.00	4.61
1698	2151	1.594293	CCCGGCAGCGATAACGATT	60.594	57.895	0.00	0.00	42.66	3.34
1890	2343	1.966451	CTGGAACAAGGACACCGGC	60.966	63.158	0.00	0.00	38.70	6.13
2079	2532	1.004918	CTCCGACCTGAACGCCTTT	60.005	57.895	0.00	0.00	0.00	3.11
2148	2601	3.808618	GCTCCTCCTCAACAACACAGAAT	60.809	47.826	0.00	0.00	0.00	2.40
2310	2763	3.119708	GGTGAATCTGTGGCATCTGAAAC	60.120	47.826	0.00	0.00	0.00	2.78
2313	2766	1.629861	TGGTGAATCTGTGGCATCTGA	59.370	47.619	0.00	0.00	0.00	3.27
2427	2880	1.134068	GGGCTTGTATCTCCACCTTCC	60.134	57.143	0.00	0.00	0.00	3.46
2466	2919	1.549037	GCAACATACCCAAACTCCCCA	60.549	52.381	0.00	0.00	0.00	4.96
2580	3033	1.073964	CATCACTTGACACAGAGGCG	58.926	55.000	0.00	0.00	0.00	5.52
2653	3106	1.065764	CATCGGCGATTCGTCCAGA	59.934	57.895	21.54	14.05	0.00	3.86
2655	3108	2.584970	GCATCGGCGATTCGTCCA	60.585	61.111	21.54	0.67	0.00	4.02
2835	3288	3.211045	GTTATAGGCCAGCGGAAATTCA	58.789	45.455	5.01	0.00	0.00	2.57
2941	3399	2.353889	CTCGATCAATTCAACTGCCAGG	59.646	50.000	0.00	0.00	0.00	4.45
2947	3405	2.787473	TGCCCTCGATCAATTCAACT	57.213	45.000	0.00	0.00	0.00	3.16
2985	3443	8.564574	TGATTATCCGGCAGTAATAATTGTTTC	58.435	33.333	0.00	0.00	0.00	2.78
2990	3448	7.117812	CGAACTGATTATCCGGCAGTAATAATT	59.882	37.037	11.43	5.02	41.65	1.40
3165	3623	2.267324	GACTGGAGAGCAGGCCAC	59.733	66.667	5.01	0.00	0.00	5.01
3276	3734	3.034635	AGGAGATAACAGGGTGCTACAG	58.965	50.000	0.00	0.00	0.00	2.74
3305	3763	7.201679	GGATTAGCATGCTACATAATGACCATC	60.202	40.741	26.87	20.05	0.00	3.51
3389	3850	6.716934	TGAGAGACAAATGAGATAGGGTAC	57.283	41.667	0.00	0.00	0.00	3.34
3411	3873	9.350357	CAAAATAAGAGACAGATGACCAAAATG	57.650	33.333	0.00	0.00	0.00	2.32
3436	3898	0.561184	ATGGTACTCCCTCCGATCCA	59.439	55.000	0.00	0.00	0.00	3.41
3516	4104	1.951510	CCAACAACGCAGAGCACAT	59.048	52.632	0.00	0.00	0.00	3.21
3586	4189	8.141298	TGAAAGGTATAGGACAAAGACACATA	57.859	34.615	0.00	0.00	0.00	2.29
3613	4216	1.272480	GGCTGGTAAATGGTCCAAGGT	60.272	52.381	0.00	0.00	33.06	3.50
3629	4232	2.166459	TCGGAATACAGAACAGAGGCTG	59.834	50.000	0.00	0.00	38.10	4.85
3638	4244	4.730949	AATCGGTCTTCGGAATACAGAA	57.269	40.909	11.71	0.00	39.77	3.02
3648	4254	3.747099	ATGCTTCAAAATCGGTCTTCG	57.253	42.857	0.00	0.00	40.90	3.79
3670	4276	3.366724	TGACGATGTCTTTCGCACATTAC	59.633	43.478	0.00	0.00	42.82	1.89
3720	4329	1.040893	GCGGGTTTAGGGGGAAATGG	61.041	60.000	0.00	0.00	0.00	3.16
3787	4396	6.645790	AGAGCTGACTTTCAAATCAAACAT	57.354	33.333	0.00	0.00	0.00	2.71
3835	4444	2.983030	GGCATGTGCGGTGGAACA	60.983	61.111	0.00	0.00	43.26	3.18
3836	4445	3.747976	GGGCATGTGCGGTGGAAC	61.748	66.667	0.00	0.00	43.26	3.62
3837	4446	4.277009	TGGGCATGTGCGGTGGAA	62.277	61.111	0.00	0.00	43.26	3.53

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.