Multiple sequence alignment - TraesCS2A01G345400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G345400 chr2A 100.000 6145 0 0 1 6145 583836934 583843078 0.000000e+00 11348.0
1 TraesCS2A01G345400 chr2A 82.166 157 22 3 4178 4328 634888548 634888704 5.000000e-26 130.0
2 TraesCS2A01G345400 chr2A 96.875 32 1 0 5634 5665 75637165 75637134 3.000000e-03 54.7
3 TraesCS2A01G345400 chr2D 93.423 2007 56 24 2036 4002 440322798 440324768 0.000000e+00 2905.0
4 TraesCS2A01G345400 chr2D 90.961 1228 64 22 587 1786 440321254 440322462 0.000000e+00 1609.0
5 TraesCS2A01G345400 chr2D 95.409 806 28 5 4166 4964 440324766 440325569 0.000000e+00 1275.0
6 TraesCS2A01G345400 chr2D 94.006 684 18 17 4961 5638 440325618 440326284 0.000000e+00 1014.0
7 TraesCS2A01G345400 chr2D 94.634 410 22 0 5736 6145 440326276 440326685 2.420000e-178 636.0
8 TraesCS2A01G345400 chr2D 96.471 255 5 1 1786 2036 440322508 440322762 9.530000e-113 418.0
9 TraesCS2A01G345400 chr2D 87.179 312 30 6 278 580 529692981 529693291 4.560000e-91 346.0
10 TraesCS2A01G345400 chr2D 88.980 245 20 2 4169 4411 592616127 592616366 4.660000e-76 296.0
11 TraesCS2A01G345400 chr2D 86.179 246 15 6 4177 4403 537931888 537931643 1.320000e-61 248.0
12 TraesCS2A01G345400 chr2D 86.307 241 5 2 57 269 440321018 440321258 2.860000e-58 237.0
13 TraesCS2A01G345400 chr2D 88.889 45 2 3 5638 5681 533886380 533886338 1.100000e-02 52.8
14 TraesCS2A01G345400 chr5A 89.906 743 46 12 992 1725 467782670 467781948 0.000000e+00 929.0
15 TraesCS2A01G345400 chr5A 89.324 740 53 11 992 1725 107891356 107892075 0.000000e+00 905.0
16 TraesCS2A01G345400 chr5A 86.503 326 31 9 265 580 366030485 366030807 4.560000e-91 346.0
17 TraesCS2A01G345400 chr5A 86.520 319 32 7 278 586 28681915 28681598 2.120000e-89 340.0
18 TraesCS2A01G345400 chr5A 88.983 236 18 3 4176 4408 355160703 355160473 1.010000e-72 285.0
19 TraesCS2A01G345400 chr5A 93.529 170 7 2 4000 4169 320214243 320214408 3.680000e-62 250.0
20 TraesCS2A01G345400 chr5A 90.960 177 12 2 3998 4174 688327044 688327216 1.030000e-57 235.0
21 TraesCS2A01G345400 chr5A 83.077 130 15 5 4183 4310 573080951 573080827 1.810000e-20 111.0
22 TraesCS2A01G345400 chr5A 100.000 32 0 0 5634 5665 590666071 590666102 6.650000e-05 60.2
23 TraesCS2A01G345400 chr2B 87.284 810 39 24 577 1359 518045277 518046049 0.000000e+00 867.0
24 TraesCS2A01G345400 chr2B 88.296 581 20 16 4998 5559 518050383 518050934 0.000000e+00 652.0
25 TraesCS2A01G345400 chr2B 95.332 407 19 0 5739 6145 518053608 518054014 0.000000e+00 647.0
26 TraesCS2A01G345400 chr2B 91.775 462 31 5 4494 4954 518049530 518049985 2.420000e-178 636.0
27 TraesCS2A01G345400 chr2B 91.883 308 17 4 2703 3002 518047708 518048015 2.050000e-114 424.0
28 TraesCS2A01G345400 chr2B 88.496 226 25 1 3241 3466 518048441 518048665 7.850000e-69 272.0
29 TraesCS2A01G345400 chr2B 91.954 174 13 1 3999 4171 744854600 744854773 6.150000e-60 243.0
30 TraesCS2A01G345400 chr2B 81.481 297 29 13 3695 3982 518049196 518049475 2.880000e-53 220.0
31 TraesCS2A01G345400 chr2B 100.000 30 0 0 3468 3497 518048828 518048857 8.600000e-04 56.5
32 TraesCS2A01G345400 chr4A 88.197 305 28 4 280 576 535469080 535468776 2.110000e-94 357.0
33 TraesCS2A01G345400 chr4A 100.000 32 0 0 2455 2486 602248884 602248853 6.650000e-05 60.2
34 TraesCS2A01G345400 chr7A 88.079 302 26 7 278 570 85765749 85765449 3.520000e-92 350.0
35 TraesCS2A01G345400 chr7A 87.220 313 29 7 277 580 693213039 693212729 4.560000e-91 346.0
36 TraesCS2A01G345400 chr7A 87.013 308 32 5 286 586 620420382 620420688 2.120000e-89 340.0
37 TraesCS2A01G345400 chr7A 92.941 170 9 1 3996 4165 494786995 494786829 1.710000e-60 244.0
38 TraesCS2A01G345400 chr7A 85.039 254 19 8 4170 4404 297943267 297943014 2.210000e-59 241.0
39 TraesCS2A01G345400 chr7A 90.476 42 1 3 5639 5679 138965502 138965463 1.100000e-02 52.8
40 TraesCS2A01G345400 chr3D 87.138 311 32 4 278 580 582120105 582119795 4.560000e-91 346.0
41 TraesCS2A01G345400 chr3D 93.605 172 8 1 3998 4169 87925997 87926165 2.840000e-63 254.0
42 TraesCS2A01G345400 chr3D 84.519 239 31 2 4177 4409 343492677 343492915 1.330000e-56 231.0
43 TraesCS2A01G345400 chr3D 100.000 32 0 0 2455 2486 3990336 3990367 6.650000e-05 60.2
44 TraesCS2A01G345400 chr3A 86.901 313 30 7 278 580 175300971 175301282 2.120000e-89 340.0
45 TraesCS2A01G345400 chr3A 91.160 181 11 3 3997 4175 600923244 600923067 2.210000e-59 241.0
46 TraesCS2A01G345400 chr7D 93.023 172 11 1 3997 4168 465477950 465477780 3.680000e-62 250.0
47 TraesCS2A01G345400 chr7D 97.222 36 1 0 2454 2489 316401626 316401591 1.850000e-05 62.1
48 TraesCS2A01G345400 chr7D 100.000 32 0 0 2455 2486 96769745 96769776 6.650000e-05 60.2
49 TraesCS2A01G345400 chr7D 100.000 28 0 0 5639 5666 48534390 48534417 1.100000e-02 52.8
50 TraesCS2A01G345400 chr3B 85.317 252 18 8 4178 4410 559885263 559885514 6.150000e-60 243.0
51 TraesCS2A01G345400 chr3B 100.000 31 0 0 5635 5665 133131488 133131458 2.390000e-04 58.4
52 TraesCS2A01G345400 chr3B 96.875 32 1 0 5634 5665 829125058 829125027 3.000000e-03 54.7
53 TraesCS2A01G345400 chr6D 92.899 169 7 3 4001 4169 431160668 431160831 2.210000e-59 241.0
54 TraesCS2A01G345400 chr5D 88.144 194 17 4 3974 4165 59947654 59947843 6.200000e-55 226.0
55 TraesCS2A01G345400 chr6B 82.890 263 24 8 4170 4411 624777676 624777414 3.730000e-52 217.0
56 TraesCS2A01G345400 chr6B 84.848 66 3 4 2427 2486 82186864 82186800 6.650000e-05 60.2
57 TraesCS2A01G345400 chr6B 100.000 28 0 0 5638 5665 213675021 213674994 1.100000e-02 52.8
58 TraesCS2A01G345400 chr6B 100.000 28 0 0 5639 5666 500891861 500891888 1.100000e-02 52.8
59 TraesCS2A01G345400 chr6B 100.000 28 0 0 5638 5665 518530938 518530911 1.100000e-02 52.8
60 TraesCS2A01G345400 chr5B 82.540 252 21 9 4176 4408 302843521 302843274 3.760000e-47 200.0
61 TraesCS2A01G345400 chr5B 96.875 32 1 0 5634 5665 518488876 518488907 3.000000e-03 54.7
62 TraesCS2A01G345400 chrUn 82.949 217 28 4 4204 4418 51484014 51484223 2.920000e-43 187.0
63 TraesCS2A01G345400 chr4B 89.041 146 14 2 4266 4409 672375 672230 4.890000e-41 180.0
64 TraesCS2A01G345400 chr4B 100.000 28 0 0 5638 5665 13941730 13941703 1.100000e-02 52.8
65 TraesCS2A01G345400 chr7B 93.023 43 3 0 635 677 568091546 568091588 5.140000e-06 63.9
66 TraesCS2A01G345400 chr7B 94.872 39 2 0 2454 2492 286834682 286834644 1.850000e-05 62.1
67 TraesCS2A01G345400 chr7B 100.000 32 0 0 2455 2486 51082102 51082133 6.650000e-05 60.2
68 TraesCS2A01G345400 chr7B 96.774 31 1 0 5635 5665 23586343 23586373 1.100000e-02 52.8
69 TraesCS2A01G345400 chr6A 100.000 28 0 0 5638 5665 56067293 56067266 1.100000e-02 52.8
70 TraesCS2A01G345400 chr1B 100.000 28 0 0 5638 5665 645732018 645732045 1.100000e-02 52.8
71 TraesCS2A01G345400 chr1A 87.234 47 4 2 2459 2505 306866008 306865964 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G345400 chr2A 583836934 583843078 6144 False 11348.000000 11348 100.000000 1 6145 1 chr2A.!!$F1 6144
1 TraesCS2A01G345400 chr2D 440321018 440326685 5667 False 1156.285714 2905 93.030143 57 6145 7 chr2D.!!$F3 6088
2 TraesCS2A01G345400 chr5A 467781948 467782670 722 True 929.000000 929 89.906000 992 1725 1 chr5A.!!$R3 733
3 TraesCS2A01G345400 chr5A 107891356 107892075 719 False 905.000000 905 89.324000 992 1725 1 chr5A.!!$F1 733
4 TraesCS2A01G345400 chr2B 518045277 518054014 8737 False 471.812500 867 90.568375 577 6145 8 chr2B.!!$F2 5568

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
82 83 0.532115 ATGCCCCAAACTGAAATCGC 59.468 50.000 0.00 0.00 0.00 4.58 F
1101 1163 0.107945 CCTGGTGAGCTAGTTGCCTC 60.108 60.000 0.00 0.00 44.23 4.70 F
1102 1164 0.107945 CTGGTGAGCTAGTTGCCTCC 60.108 60.000 0.00 0.00 44.23 4.30 F
1108 1170 0.547712 AGCTAGTTGCCTCCCCTCAA 60.548 55.000 0.00 0.00 44.23 3.02 F
1147 1209 1.443872 CCGCGTTACAGTTCTCGCT 60.444 57.895 4.92 0.00 45.25 4.93 F
1365 1434 1.447140 GGCGGATCAGTTGCGTACA 60.447 57.895 0.00 0.00 41.84 2.90 F
2445 3044 0.108281 GTACTCCCTCCGTTCCAAGC 60.108 60.000 0.00 0.00 0.00 4.01 F
2606 3261 0.332972 GAGGTGGCCTTCCATTTCCT 59.667 55.000 17.31 6.66 45.62 3.36 F
4230 5456 0.534203 ACATGGCAACTCCGAACGTT 60.534 50.000 0.00 0.00 37.80 3.99 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1364 1433 0.320247 GCGAGGATCCACAGCCTATG 60.320 60.000 15.82 0.0 39.13 2.23 R
2104 2694 0.694105 ATAAAAATGGGGCAGGGGGC 60.694 55.000 0.00 0.0 43.74 5.80 R
2158 2748 1.018148 TTGTGGTGGCTTTACACACG 58.982 50.000 0.00 0.0 43.99 4.49 R
2184 2774 1.069204 CGATACCCTCTGGATGTGTGG 59.931 57.143 0.00 0.0 34.81 4.17 R
2367 2959 2.892852 TGTTCTCAAATTTCTGCCCTGG 59.107 45.455 0.00 0.0 0.00 4.45 R
2710 3366 3.525800 ACCAGTTTACCCATGCTTCTT 57.474 42.857 0.00 0.0 0.00 2.52 R
4377 5609 0.255890 AAGTGCCACAAGTCAGGTGT 59.744 50.000 0.00 0.0 34.46 4.16 R
4417 5649 3.575630 TGACGTCACACTTCTATGCTTC 58.424 45.455 15.76 0.0 0.00 3.86 R
5843 10115 0.827925 AGCTGGACGACTTCCTCACA 60.828 55.000 0.00 0.0 46.10 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 6.257169 GTTTATACGAGTGAGTGTATGCAC 57.743 41.667 5.71 5.71 45.57 4.57
45 46 5.969970 GTGTATGCACGTGTATATAGACG 57.030 43.478 25.81 25.76 46.73 4.18
46 47 4.320164 GTGTATGCACGTGTATATAGACGC 59.680 45.833 26.90 18.85 45.47 5.19
47 48 3.917329 ATGCACGTGTATATAGACGCT 57.083 42.857 26.90 14.50 45.47 5.07
48 49 3.703286 TGCACGTGTATATAGACGCTT 57.297 42.857 26.90 10.36 45.47 4.68
49 50 3.368495 TGCACGTGTATATAGACGCTTG 58.632 45.455 26.90 20.43 45.47 4.01
50 51 2.153247 GCACGTGTATATAGACGCTTGC 59.847 50.000 26.90 24.78 45.47 4.01
51 52 2.400735 CACGTGTATATAGACGCTTGCG 59.599 50.000 26.90 13.70 45.47 4.85
52 53 2.032550 ACGTGTATATAGACGCTTGCGT 59.967 45.455 26.90 20.76 45.47 5.24
53 54 3.248363 ACGTGTATATAGACGCTTGCGTA 59.752 43.478 26.90 6.86 45.47 4.42
54 55 4.213674 CGTGTATATAGACGCTTGCGTAA 58.786 43.478 20.67 12.27 36.20 3.18
55 56 4.671964 CGTGTATATAGACGCTTGCGTAAA 59.328 41.667 20.67 11.92 36.20 2.01
82 83 0.532115 ATGCCCCAAACTGAAATCGC 59.468 50.000 0.00 0.00 0.00 4.58
214 243 1.867233 CTCGAACCACCTCAACACTTG 59.133 52.381 0.00 0.00 0.00 3.16
259 288 1.470979 GCTCAAATCTAGCGACCCGAA 60.471 52.381 0.00 0.00 0.00 4.30
269 298 1.070758 AGCGACCCGAAGCATATTCAT 59.929 47.619 0.00 0.00 35.48 2.57
270 299 1.461127 GCGACCCGAAGCATATTCATC 59.539 52.381 0.00 0.00 0.00 2.92
271 300 2.069273 CGACCCGAAGCATATTCATCC 58.931 52.381 0.00 0.00 0.00 3.51
272 301 2.547855 CGACCCGAAGCATATTCATCCA 60.548 50.000 0.00 0.00 0.00 3.41
273 302 2.808543 GACCCGAAGCATATTCATCCAC 59.191 50.000 0.00 0.00 0.00 4.02
274 303 1.800586 CCCGAAGCATATTCATCCACG 59.199 52.381 0.00 0.00 0.00 4.94
275 304 2.547855 CCCGAAGCATATTCATCCACGA 60.548 50.000 0.00 0.00 0.00 4.35
276 305 2.733552 CCGAAGCATATTCATCCACGAG 59.266 50.000 0.00 0.00 0.00 4.18
277 306 3.384668 CGAAGCATATTCATCCACGAGT 58.615 45.455 0.00 0.00 0.00 4.18
278 307 4.546570 CGAAGCATATTCATCCACGAGTA 58.453 43.478 0.00 0.00 0.00 2.59
279 308 4.982295 CGAAGCATATTCATCCACGAGTAA 59.018 41.667 0.00 0.00 0.00 2.24
280 309 5.117745 CGAAGCATATTCATCCACGAGTAAG 59.882 44.000 0.00 0.00 0.00 2.34
281 310 4.887748 AGCATATTCATCCACGAGTAAGG 58.112 43.478 0.00 0.00 0.00 2.69
282 311 3.433615 GCATATTCATCCACGAGTAAGGC 59.566 47.826 0.00 0.00 0.00 4.35
283 312 2.622064 ATTCATCCACGAGTAAGGCC 57.378 50.000 0.00 0.00 0.00 5.19
284 313 1.568504 TTCATCCACGAGTAAGGCCT 58.431 50.000 0.00 0.00 0.00 5.19
285 314 1.568504 TCATCCACGAGTAAGGCCTT 58.431 50.000 24.18 24.18 0.00 4.35
286 315 1.906574 TCATCCACGAGTAAGGCCTTT 59.093 47.619 26.08 6.29 0.00 3.11
287 316 2.304761 TCATCCACGAGTAAGGCCTTTT 59.695 45.455 26.08 12.93 0.00 2.27
288 317 2.178912 TCCACGAGTAAGGCCTTTTG 57.821 50.000 26.08 13.24 0.00 2.44
289 318 1.165270 CCACGAGTAAGGCCTTTTGG 58.835 55.000 26.08 17.62 44.18 3.28
290 319 1.544759 CCACGAGTAAGGCCTTTTGGT 60.545 52.381 26.08 16.50 42.99 3.67
291 320 2.227194 CACGAGTAAGGCCTTTTGGTT 58.773 47.619 26.08 0.00 42.99 3.67
292 321 2.621526 CACGAGTAAGGCCTTTTGGTTT 59.378 45.455 26.08 0.00 42.99 3.27
293 322 2.882761 ACGAGTAAGGCCTTTTGGTTTC 59.117 45.455 26.08 11.21 42.99 2.78
294 323 2.882137 CGAGTAAGGCCTTTTGGTTTCA 59.118 45.455 26.08 0.00 42.99 2.69
295 324 3.316868 CGAGTAAGGCCTTTTGGTTTCAA 59.683 43.478 26.08 0.00 42.99 2.69
296 325 4.556699 CGAGTAAGGCCTTTTGGTTTCAAG 60.557 45.833 26.08 0.93 42.99 3.02
297 326 3.641436 AGTAAGGCCTTTTGGTTTCAAGG 59.359 43.478 26.08 0.00 42.39 3.61
298 327 2.470057 AGGCCTTTTGGTTTCAAGGA 57.530 45.000 0.00 0.00 42.11 3.36
299 328 2.319844 AGGCCTTTTGGTTTCAAGGAG 58.680 47.619 0.00 0.00 42.11 3.69
300 329 2.039418 GGCCTTTTGGTTTCAAGGAGT 58.961 47.619 0.00 0.00 42.11 3.85
301 330 2.434336 GGCCTTTTGGTTTCAAGGAGTT 59.566 45.455 0.00 0.00 42.11 3.01
302 331 3.118408 GGCCTTTTGGTTTCAAGGAGTTT 60.118 43.478 0.00 0.00 42.11 2.66
303 332 4.119862 GCCTTTTGGTTTCAAGGAGTTTC 58.880 43.478 1.99 0.00 42.11 2.78
304 333 4.382577 GCCTTTTGGTTTCAAGGAGTTTCA 60.383 41.667 1.99 0.00 42.11 2.69
305 334 5.684813 GCCTTTTGGTTTCAAGGAGTTTCAT 60.685 40.000 1.99 0.00 42.11 2.57
306 335 6.462347 GCCTTTTGGTTTCAAGGAGTTTCATA 60.462 38.462 1.99 0.00 42.11 2.15
307 336 7.496747 CCTTTTGGTTTCAAGGAGTTTCATAA 58.503 34.615 0.00 0.00 42.11 1.90
308 337 7.984617 CCTTTTGGTTTCAAGGAGTTTCATAAA 59.015 33.333 0.00 0.00 42.11 1.40
309 338 9.377312 CTTTTGGTTTCAAGGAGTTTCATAAAA 57.623 29.630 0.00 0.00 33.98 1.52
310 339 9.726438 TTTTGGTTTCAAGGAGTTTCATAAAAA 57.274 25.926 0.00 0.00 33.98 1.94
311 340 9.898152 TTTGGTTTCAAGGAGTTTCATAAAAAT 57.102 25.926 0.00 0.00 33.98 1.82
312 341 9.898152 TTGGTTTCAAGGAGTTTCATAAAAATT 57.102 25.926 0.00 0.00 0.00 1.82
313 342 9.541143 TGGTTTCAAGGAGTTTCATAAAAATTC 57.459 29.630 0.00 0.00 0.00 2.17
314 343 9.764363 GGTTTCAAGGAGTTTCATAAAAATTCT 57.236 29.630 0.00 0.00 29.55 2.40
359 388 7.564128 GGATTGTTTCCTTTAAAGCTTTTTCG 58.436 34.615 18.47 5.72 41.78 3.46
360 389 7.223971 GGATTGTTTCCTTTAAAGCTTTTTCGT 59.776 33.333 18.47 0.00 41.78 3.85
361 390 7.892778 TTGTTTCCTTTAAAGCTTTTTCGTT 57.107 28.000 18.47 0.00 0.00 3.85
362 391 7.892778 TGTTTCCTTTAAAGCTTTTTCGTTT 57.107 28.000 18.47 0.00 0.00 3.60
363 392 8.983307 TGTTTCCTTTAAAGCTTTTTCGTTTA 57.017 26.923 18.47 0.00 0.00 2.01
364 393 9.589111 TGTTTCCTTTAAAGCTTTTTCGTTTAT 57.411 25.926 18.47 0.00 0.00 1.40
377 406 9.967245 GCTTTTTCGTTTATAAAAATGGATTCC 57.033 29.630 0.00 0.00 35.79 3.01
466 495 6.729690 AAAAATCTCCTTGGTGTCAATCAA 57.270 33.333 0.00 0.00 31.75 2.57
467 496 6.729690 AAAATCTCCTTGGTGTCAATCAAA 57.270 33.333 0.00 0.00 31.75 2.69
468 497 6.923199 AAATCTCCTTGGTGTCAATCAAAT 57.077 33.333 0.00 0.00 31.75 2.32
469 498 5.909621 ATCTCCTTGGTGTCAATCAAATG 57.090 39.130 0.00 0.00 31.75 2.32
470 499 4.984295 TCTCCTTGGTGTCAATCAAATGA 58.016 39.130 0.00 0.00 31.75 2.57
494 523 9.010029 TGACATTTTGTTTCCTATTCTTACTCC 57.990 33.333 0.00 0.00 0.00 3.85
495 524 9.232473 GACATTTTGTTTCCTATTCTTACTCCT 57.768 33.333 0.00 0.00 0.00 3.69
498 527 9.907229 ATTTTGTTTCCTATTCTTACTCCTAGG 57.093 33.333 0.82 0.82 33.46 3.02
499 528 8.674925 TTTGTTTCCTATTCTTACTCCTAGGA 57.325 34.615 11.98 11.98 38.34 2.94
500 529 8.855804 TTGTTTCCTATTCTTACTCCTAGGAT 57.144 34.615 13.12 5.46 39.49 3.24
501 530 8.855804 TGTTTCCTATTCTTACTCCTAGGATT 57.144 34.615 13.12 9.70 39.49 3.01
502 531 9.280456 TGTTTCCTATTCTTACTCCTAGGATTT 57.720 33.333 13.12 5.04 39.49 2.17
503 532 9.549078 GTTTCCTATTCTTACTCCTAGGATTTG 57.451 37.037 13.12 3.13 39.49 2.32
504 533 9.502035 TTTCCTATTCTTACTCCTAGGATTTGA 57.498 33.333 13.12 6.21 39.49 2.69
505 534 8.713708 TCCTATTCTTACTCCTAGGATTTGAG 57.286 38.462 13.12 8.79 35.86 3.02
506 535 8.511969 TCCTATTCTTACTCCTAGGATTTGAGA 58.488 37.037 13.12 11.00 35.86 3.27
507 536 9.320295 CCTATTCTTACTCCTAGGATTTGAGAT 57.680 37.037 13.12 6.04 33.93 2.75
510 539 9.661954 ATTCTTACTCCTAGGATTTGAGATACA 57.338 33.333 13.12 0.49 0.00 2.29
511 540 9.661954 TTCTTACTCCTAGGATTTGAGATACAT 57.338 33.333 13.12 0.00 0.00 2.29
512 541 9.083422 TCTTACTCCTAGGATTTGAGATACATG 57.917 37.037 13.12 0.00 0.00 3.21
513 542 8.783660 TTACTCCTAGGATTTGAGATACATGT 57.216 34.615 13.12 2.69 0.00 3.21
514 543 7.296628 ACTCCTAGGATTTGAGATACATGTC 57.703 40.000 13.12 0.00 0.00 3.06
515 544 6.841229 ACTCCTAGGATTTGAGATACATGTCA 59.159 38.462 13.12 0.00 0.00 3.58
516 545 7.512058 ACTCCTAGGATTTGAGATACATGTCAT 59.488 37.037 13.12 0.00 29.66 3.06
517 546 7.901029 TCCTAGGATTTGAGATACATGTCATC 58.099 38.462 7.62 4.47 29.66 2.92
518 547 7.732140 TCCTAGGATTTGAGATACATGTCATCT 59.268 37.037 7.62 9.42 35.43 2.90
519 548 8.034215 CCTAGGATTTGAGATACATGTCATCTC 58.966 40.741 24.04 24.04 45.76 2.75
528 557 8.755696 GAGATACATGTCATCTCATTTCCTAC 57.244 38.462 24.95 8.46 45.17 3.18
529 558 8.255111 AGATACATGTCATCTCATTTCCTACA 57.745 34.615 0.00 0.00 0.00 2.74
530 559 8.708378 AGATACATGTCATCTCATTTCCTACAA 58.292 33.333 0.00 0.00 0.00 2.41
531 560 9.330063 GATACATGTCATCTCATTTCCTACAAA 57.670 33.333 0.00 0.00 0.00 2.83
532 561 9.685276 ATACATGTCATCTCATTTCCTACAAAA 57.315 29.630 0.00 0.00 0.00 2.44
533 562 8.585471 ACATGTCATCTCATTTCCTACAAAAT 57.415 30.769 0.00 0.00 0.00 1.82
534 563 9.028284 ACATGTCATCTCATTTCCTACAAAATT 57.972 29.630 0.00 0.00 0.00 1.82
535 564 9.512435 CATGTCATCTCATTTCCTACAAAATTC 57.488 33.333 0.00 0.00 0.00 2.17
536 565 8.055279 TGTCATCTCATTTCCTACAAAATTCC 57.945 34.615 0.00 0.00 0.00 3.01
537 566 7.890127 TGTCATCTCATTTCCTACAAAATTCCT 59.110 33.333 0.00 0.00 0.00 3.36
538 567 9.396022 GTCATCTCATTTCCTACAAAATTCCTA 57.604 33.333 0.00 0.00 0.00 2.94
542 571 9.408648 TCTCATTTCCTACAAAATTCCTATTCC 57.591 33.333 0.00 0.00 0.00 3.01
543 572 9.413734 CTCATTTCCTACAAAATTCCTATTCCT 57.586 33.333 0.00 0.00 0.00 3.36
546 575 8.726870 TTTCCTACAAAATTCCTATTCCTACG 57.273 34.615 0.00 0.00 0.00 3.51
547 576 7.664552 TCCTACAAAATTCCTATTCCTACGA 57.335 36.000 0.00 0.00 0.00 3.43
548 577 8.258850 TCCTACAAAATTCCTATTCCTACGAT 57.741 34.615 0.00 0.00 0.00 3.73
549 578 9.370930 TCCTACAAAATTCCTATTCCTACGATA 57.629 33.333 0.00 0.00 0.00 2.92
550 579 9.991906 CCTACAAAATTCCTATTCCTACGATAA 57.008 33.333 0.00 0.00 0.00 1.75
553 582 9.503399 ACAAAATTCCTATTCCTACGATAATCC 57.497 33.333 0.00 0.00 0.00 3.01
554 583 9.726438 CAAAATTCCTATTCCTACGATAATCCT 57.274 33.333 0.00 0.00 0.00 3.24
558 587 8.763984 TTCCTATTCCTACGATAATCCTATCC 57.236 38.462 0.00 0.00 31.68 2.59
559 588 8.115490 TCCTATTCCTACGATAATCCTATCCT 57.885 38.462 0.00 0.00 31.68 3.24
560 589 9.234086 TCCTATTCCTACGATAATCCTATCCTA 57.766 37.037 0.00 0.00 31.68 2.94
575 604 9.746457 AATCCTATCCTATAAATCAAAAGAGGC 57.254 33.333 0.00 0.00 0.00 4.70
602 633 4.487714 TGTTCATTCACCCACTCTATCC 57.512 45.455 0.00 0.00 0.00 2.59
752 784 3.509296 CTCGCGTCGGTCGATCTCC 62.509 68.421 5.77 0.00 42.86 3.71
765 797 2.948840 GATCTCCGTGGGCCGTAACG 62.949 65.000 15.17 15.17 39.48 3.18
843 885 4.261572 GCAGAATTTACCAAAGCACACAGA 60.262 41.667 0.00 0.00 0.00 3.41
915 971 3.330720 CCCCTCCCGTTGCTTCCT 61.331 66.667 0.00 0.00 0.00 3.36
1098 1160 0.674895 CCACCTGGTGAGCTAGTTGC 60.675 60.000 27.94 0.00 43.29 4.17
1099 1161 0.674895 CACCTGGTGAGCTAGTTGCC 60.675 60.000 22.33 0.00 44.23 4.52
1100 1162 0.838122 ACCTGGTGAGCTAGTTGCCT 60.838 55.000 0.00 0.00 44.23 4.75
1101 1163 0.107945 CCTGGTGAGCTAGTTGCCTC 60.108 60.000 0.00 0.00 44.23 4.70
1102 1164 0.107945 CTGGTGAGCTAGTTGCCTCC 60.108 60.000 0.00 0.00 44.23 4.30
1103 1165 1.222113 GGTGAGCTAGTTGCCTCCC 59.778 63.158 0.00 0.00 44.23 4.30
1104 1166 1.222113 GTGAGCTAGTTGCCTCCCC 59.778 63.158 0.00 0.00 44.23 4.81
1105 1167 1.081092 TGAGCTAGTTGCCTCCCCT 59.919 57.895 0.00 0.00 44.23 4.79
1106 1168 0.978146 TGAGCTAGTTGCCTCCCCTC 60.978 60.000 0.00 0.00 44.23 4.30
1107 1169 0.978146 GAGCTAGTTGCCTCCCCTCA 60.978 60.000 0.00 0.00 44.23 3.86
1108 1170 0.547712 AGCTAGTTGCCTCCCCTCAA 60.548 55.000 0.00 0.00 44.23 3.02
1144 1206 2.098831 GCCCCGCGTTACAGTTCTC 61.099 63.158 4.92 0.00 0.00 2.87
1147 1209 1.443872 CCGCGTTACAGTTCTCGCT 60.444 57.895 4.92 0.00 45.25 4.93
1150 1212 1.630148 GCGTTACAGTTCTCGCTGAT 58.370 50.000 8.69 0.00 44.28 2.90
1220 1288 2.202349 GGCAGCGCGTGTGATTTC 60.202 61.111 8.43 0.00 0.00 2.17
1297 1365 4.141620 GGATTTGAGACCTGCTAGGAATGA 60.142 45.833 8.91 0.00 37.67 2.57
1359 1428 5.666969 TTAATAATTCGGCGGATCAGTTG 57.333 39.130 7.21 0.00 0.00 3.16
1364 1433 2.514013 CGGCGGATCAGTTGCGTAC 61.514 63.158 0.00 0.00 41.84 3.67
1365 1434 1.447140 GGCGGATCAGTTGCGTACA 60.447 57.895 0.00 0.00 41.84 2.90
1432 1548 2.170985 CGTTTCGCTTCGCTGTGG 59.829 61.111 0.00 0.00 0.00 4.17
1447 1563 2.223829 GCTGTGGTAGTATGATCTGCGT 60.224 50.000 0.00 0.00 0.00 5.24
1449 1565 2.032924 TGTGGTAGTATGATCTGCGTCG 59.967 50.000 0.00 0.00 0.00 5.12
1489 1611 4.749099 GCTATTCATGAACCACTAGCAGAG 59.251 45.833 24.23 5.12 33.49 3.35
1566 1689 2.934553 GGACGAATGCTTACAGTTACCC 59.065 50.000 0.00 0.00 0.00 3.69
1605 1983 2.357637 TGCCAGAAGTTTGTGTACTTGC 59.642 45.455 0.00 0.00 38.43 4.01
1628 2007 2.093783 CGGTATGTTTTCGTCTGGAAGC 59.906 50.000 0.00 0.00 35.70 3.86
1820 2361 6.723977 TCCTTATTTTGGTTCTAATGCCACTT 59.276 34.615 0.00 0.00 34.02 3.16
1882 2425 2.549633 ATGTATGTTCGCTGCAAAGC 57.450 45.000 0.00 0.00 0.00 3.51
1993 2537 7.916914 ATTGTTGGTACTAAACTATGGACAC 57.083 36.000 11.53 0.00 0.00 3.67
2037 2585 2.906389 TGCTAGATCTGTGACCCTGTTT 59.094 45.455 5.18 0.00 0.00 2.83
2039 2587 4.202461 TGCTAGATCTGTGACCCTGTTTTT 60.202 41.667 5.18 0.00 0.00 1.94
2083 2672 7.120285 AGGATTGTAGACAATTTGTGATGTCAG 59.880 37.037 6.80 0.00 45.72 3.51
2121 2711 2.610546 GCCCCCTGCCCCATTTTT 60.611 61.111 0.00 0.00 0.00 1.94
2125 2715 2.204463 CCCCCTGCCCCATTTTTATTT 58.796 47.619 0.00 0.00 0.00 1.40
2184 2774 2.908688 AAAGCCACCACAAATTGACC 57.091 45.000 0.00 0.00 0.00 4.02
2192 2783 2.627699 ACCACAAATTGACCCACACATC 59.372 45.455 0.00 0.00 0.00 3.06
2195 2786 2.892852 ACAAATTGACCCACACATCCAG 59.107 45.455 0.00 0.00 0.00 3.86
2367 2959 3.244976 GCACAAACACCTGAATATGCAC 58.755 45.455 0.00 0.00 0.00 4.57
2444 3043 1.263356 TGTACTCCCTCCGTTCCAAG 58.737 55.000 0.00 0.00 0.00 3.61
2445 3044 0.108281 GTACTCCCTCCGTTCCAAGC 60.108 60.000 0.00 0.00 0.00 4.01
2447 3046 1.078848 CTCCCTCCGTTCCAAGCTG 60.079 63.158 0.00 0.00 0.00 4.24
2448 3047 1.831652 CTCCCTCCGTTCCAAGCTGT 61.832 60.000 0.00 0.00 0.00 4.40
2450 3049 1.237285 CCCTCCGTTCCAAGCTGTTG 61.237 60.000 0.00 0.00 0.00 3.33
2451 3050 0.535102 CCTCCGTTCCAAGCTGTTGT 60.535 55.000 0.00 0.00 30.95 3.32
2452 3051 0.868406 CTCCGTTCCAAGCTGTTGTC 59.132 55.000 0.00 0.00 30.95 3.18
2453 3052 0.878523 TCCGTTCCAAGCTGTTGTCG 60.879 55.000 0.00 0.00 30.95 4.35
2486 3141 3.240302 ACTAATATGGAACGGAGGGAGG 58.760 50.000 0.00 0.00 0.00 4.30
2572 3227 4.637534 GCTGGTGCCTTGGTATATATGATG 59.362 45.833 0.00 0.00 0.00 3.07
2606 3261 0.332972 GAGGTGGCCTTCCATTTCCT 59.667 55.000 17.31 6.66 45.62 3.36
2672 3327 5.291971 AGGATTGTGTTTCAAATTGCACTC 58.708 37.500 0.00 0.00 39.62 3.51
2761 3417 8.279970 ACATGCTAAAATGTTGCTTATCACTA 57.720 30.769 0.00 0.00 37.50 2.74
2982 3645 1.877637 TGCATGTGTGGTGAGTACAC 58.122 50.000 0.00 0.00 46.52 2.90
3055 3718 9.944376 TTAAGACTTGACTACTTCTATTGCATT 57.056 29.630 0.00 0.00 0.00 3.56
3111 3890 4.712191 TGCATTCATTTGTTTGCTTTCG 57.288 36.364 0.00 0.00 36.10 3.46
3116 3895 6.575132 CATTCATTTGTTTGCTTTCGTCTTC 58.425 36.000 0.00 0.00 0.00 2.87
3177 3961 3.989167 TGAAATTTGCTGCTGTATGTTGC 59.011 39.130 0.00 0.00 0.00 4.17
3181 3965 0.798159 TGCTGCTGTATGTTGCGAAG 59.202 50.000 0.00 0.00 0.00 3.79
3294 4170 4.466015 ACATGTATGCCTAAAACCTTTGGG 59.534 41.667 0.00 0.00 38.88 4.12
3386 4262 5.046304 TCAGTCTCATCCTAAAAGGTCTTGG 60.046 44.000 0.00 0.00 36.53 3.61
3406 4282 3.245229 TGGGACTTGTGGTGAAATAGCAT 60.245 43.478 0.00 0.00 39.30 3.79
3430 4306 2.112718 CTAGCATGGGAGGCTGCC 59.887 66.667 19.41 19.41 42.62 4.85
3671 4753 7.517614 TCATAATGCTGGAAACAACACTTAA 57.482 32.000 0.00 0.00 39.65 1.85
3759 4959 5.569059 GCATGTTCAATGTGCAGTAAGTTAC 59.431 40.000 4.78 4.78 38.68 2.50
3938 5140 8.974060 TGGACTTGATTAACTACTTTTTCACT 57.026 30.769 0.00 0.00 0.00 3.41
4002 5228 9.349713 TGTTTAGAAATCCCCATTGACATATAC 57.650 33.333 0.00 0.00 0.00 1.47
4003 5229 9.574516 GTTTAGAAATCCCCATTGACATATACT 57.425 33.333 0.00 0.00 0.00 2.12
4004 5230 9.793259 TTTAGAAATCCCCATTGACATATACTC 57.207 33.333 0.00 0.00 0.00 2.59
4005 5231 6.784031 AGAAATCCCCATTGACATATACTCC 58.216 40.000 0.00 0.00 0.00 3.85
4006 5232 5.520748 AATCCCCATTGACATATACTCCC 57.479 43.478 0.00 0.00 0.00 4.30
4007 5233 4.228237 TCCCCATTGACATATACTCCCT 57.772 45.455 0.00 0.00 0.00 4.20
4008 5234 4.168101 TCCCCATTGACATATACTCCCTC 58.832 47.826 0.00 0.00 0.00 4.30
4009 5235 3.909995 CCCCATTGACATATACTCCCTCA 59.090 47.826 0.00 0.00 0.00 3.86
4010 5236 4.019860 CCCCATTGACATATACTCCCTCAG 60.020 50.000 0.00 0.00 0.00 3.35
4011 5237 4.594920 CCCATTGACATATACTCCCTCAGT 59.405 45.833 0.00 0.00 39.41 3.41
4012 5238 5.072329 CCCATTGACATATACTCCCTCAGTT 59.928 44.000 0.00 0.00 36.43 3.16
4013 5239 6.226787 CCATTGACATATACTCCCTCAGTTC 58.773 44.000 0.00 0.00 36.43 3.01
4014 5240 5.871396 TTGACATATACTCCCTCAGTTCC 57.129 43.478 0.00 0.00 36.43 3.62
4015 5241 5.144159 TGACATATACTCCCTCAGTTCCT 57.856 43.478 0.00 0.00 36.43 3.36
4016 5242 6.275692 TGACATATACTCCCTCAGTTCCTA 57.724 41.667 0.00 0.00 36.43 2.94
4017 5243 6.679542 TGACATATACTCCCTCAGTTCCTAA 58.320 40.000 0.00 0.00 36.43 2.69
4018 5244 7.130099 TGACATATACTCCCTCAGTTCCTAAA 58.870 38.462 0.00 0.00 36.43 1.85
4019 5245 7.789831 TGACATATACTCCCTCAGTTCCTAAAT 59.210 37.037 0.00 0.00 36.43 1.40
4020 5246 9.310449 GACATATACTCCCTCAGTTCCTAAATA 57.690 37.037 0.00 0.00 36.43 1.40
4021 5247 9.845214 ACATATACTCCCTCAGTTCCTAAATAT 57.155 33.333 0.00 0.00 36.43 1.28
4025 5251 9.900112 ATACTCCCTCAGTTCCTAAATATAAGT 57.100 33.333 0.00 0.00 36.43 2.24
4026 5252 8.252624 ACTCCCTCAGTTCCTAAATATAAGTC 57.747 38.462 0.00 0.00 26.56 3.01
4027 5253 8.068733 ACTCCCTCAGTTCCTAAATATAAGTCT 58.931 37.037 0.00 0.00 26.56 3.24
4028 5254 8.855804 TCCCTCAGTTCCTAAATATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
4029 5255 9.280456 TCCCTCAGTTCCTAAATATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
4030 5256 9.907229 CCCTCAGTTCCTAAATATAAGTCTTTT 57.093 33.333 0.00 0.00 0.00 2.27
4060 5286 5.977489 TCCAATATGGACTACATACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
4061 5287 5.391256 TCCAATATGGACTACATACGGAGT 58.609 41.667 0.00 0.00 42.67 3.85
4062 5288 6.545567 TCCAATATGGACTACATACGGAGTA 58.454 40.000 0.00 0.00 45.10 2.59
4063 5289 7.005902 TCCAATATGGACTACATACGGAGTAA 58.994 38.462 0.00 0.00 44.48 2.24
4064 5290 7.506599 TCCAATATGGACTACATACGGAGTAAA 59.493 37.037 0.00 0.00 44.48 2.01
4065 5291 8.145767 CCAATATGGACTACATACGGAGTAAAA 58.854 37.037 0.00 0.00 43.87 1.52
4079 5305 6.931838 ACGGAGTAAAATGAGTGAATCTACA 58.068 36.000 0.00 0.00 41.94 2.74
4080 5306 6.812160 ACGGAGTAAAATGAGTGAATCTACAC 59.188 38.462 0.00 0.00 41.94 2.90
4159 5385 8.591072 TGGACTTATAATATTTAGGAACGGAGG 58.409 37.037 0.00 0.00 0.00 4.30
4160 5386 8.039538 GGACTTATAATATTTAGGAACGGAGGG 58.960 40.741 0.00 0.00 0.00 4.30
4161 5387 8.731591 ACTTATAATATTTAGGAACGGAGGGA 57.268 34.615 0.00 0.00 0.00 4.20
4162 5388 8.813951 ACTTATAATATTTAGGAACGGAGGGAG 58.186 37.037 0.00 0.00 0.00 4.30
4163 5389 8.731591 TTATAATATTTAGGAACGGAGGGAGT 57.268 34.615 0.00 0.00 0.00 3.85
4164 5390 9.827198 TTATAATATTTAGGAACGGAGGGAGTA 57.173 33.333 0.00 0.00 0.00 2.59
4165 5391 8.731591 ATAATATTTAGGAACGGAGGGAGTAA 57.268 34.615 0.00 0.00 0.00 2.24
4229 5455 1.070786 ACATGGCAACTCCGAACGT 59.929 52.632 0.00 0.00 37.80 3.99
4230 5456 0.534203 ACATGGCAACTCCGAACGTT 60.534 50.000 0.00 0.00 37.80 3.99
4234 5460 2.983604 TGGCAACTCCGAACGTTTTCG 61.984 52.381 0.46 1.74 46.11 3.46
4289 5519 5.050837 GGCAACTTTTGTGCTTCAGTTTATG 60.051 40.000 0.00 0.00 0.00 1.90
4294 5524 7.319646 ACTTTTGTGCTTCAGTTTATGTTTGA 58.680 30.769 0.00 0.00 0.00 2.69
4336 5568 1.202114 GAATTTGCCATCCTTGCGTGA 59.798 47.619 0.00 0.00 0.00 4.35
4394 5626 2.024918 CACACCTGACTTGTGGCAC 58.975 57.895 11.55 11.55 40.66 5.01
4411 5643 5.540337 TGTGGCACTTATCATTTGGGTAAAA 59.460 36.000 19.83 0.00 0.00 1.52
4417 5649 8.925700 GCACTTATCATTTGGGTAAAAGAAAAG 58.074 33.333 0.00 0.00 28.62 2.27
4448 5680 2.942376 AGTGTGACGTCATTTTCTTGCA 59.058 40.909 23.12 9.36 0.00 4.08
4681 5914 5.334724 GCTCACATGCTTTAGCTTCCATATC 60.335 44.000 0.00 0.00 42.66 1.63
4695 5928 5.126061 GCTTCCATATCTTGATGTTTGTGGT 59.874 40.000 0.00 0.00 0.00 4.16
4793 6026 3.822167 TCAAGAGCATCATTTTGTGAGCA 59.178 39.130 0.00 0.00 40.92 4.26
4795 6028 4.859304 AGAGCATCATTTTGTGAGCAAA 57.141 36.364 0.00 0.00 40.92 3.68
4809 6042 3.003275 GTGAGCAAATTCAACGGTTCTCA 59.997 43.478 3.03 3.03 0.00 3.27
4871 6104 4.328169 GCTCCAAAGCTGCAATTATTGAAC 59.672 41.667 9.36 0.00 45.55 3.18
4980 6265 1.224965 GCTCATCTCGGAAGATTGGC 58.775 55.000 0.00 0.00 40.38 4.52
5147 6754 4.162509 GCTCTGGGGAGTTACACTTAGATT 59.837 45.833 0.00 0.00 41.38 2.40
5229 6836 6.432607 AGCTCATCTTTGATGTAATGTGTG 57.567 37.500 7.33 0.00 0.00 3.82
5321 6930 2.867109 AGCTTCAGTTGGTGCTGTAT 57.133 45.000 0.00 0.00 37.70 2.29
5352 6961 4.385825 TGTTTGCTGTCGATTAGAACCTT 58.614 39.130 4.07 0.00 0.00 3.50
5356 6965 3.109619 GCTGTCGATTAGAACCTTCTCG 58.890 50.000 4.07 0.00 38.70 4.04
5391 7000 6.709018 TGCTGTACAACTAGCAGTGATATA 57.291 37.500 3.57 0.00 44.36 0.86
5392 7001 6.504398 TGCTGTACAACTAGCAGTGATATAC 58.496 40.000 3.57 0.00 44.36 1.47
5393 7002 6.321435 TGCTGTACAACTAGCAGTGATATACT 59.679 38.462 3.57 0.00 44.36 2.12
5472 7081 7.691213 TCCACTTTCTGGGTACACAATTATTA 58.309 34.615 0.00 0.00 41.06 0.98
5572 7196 9.478019 CTAACGCAACTTTTCATAGTAATTCTG 57.522 33.333 0.00 0.00 0.00 3.02
5573 7197 6.314784 ACGCAACTTTTCATAGTAATTCTGC 58.685 36.000 0.00 0.00 0.00 4.26
5574 7198 6.149474 ACGCAACTTTTCATAGTAATTCTGCT 59.851 34.615 0.00 0.00 29.15 4.24
5597 7223 6.572898 GCTCTCTCTCTCCCAGATGATTATTG 60.573 46.154 0.00 0.00 0.00 1.90
5623 7249 2.348411 AGCAACACAGCCAACTTAGT 57.652 45.000 0.00 0.00 34.23 2.24
5624 7250 3.485463 AGCAACACAGCCAACTTAGTA 57.515 42.857 0.00 0.00 34.23 1.82
5625 7251 3.403038 AGCAACACAGCCAACTTAGTAG 58.597 45.455 0.00 0.00 34.23 2.57
5626 7252 3.139077 GCAACACAGCCAACTTAGTAGT 58.861 45.455 0.00 0.00 35.68 2.73
5627 7253 4.039973 AGCAACACAGCCAACTTAGTAGTA 59.960 41.667 0.00 0.00 31.95 1.82
5628 7254 4.151867 GCAACACAGCCAACTTAGTAGTAC 59.848 45.833 0.00 0.00 33.17 2.73
5629 7255 5.539048 CAACACAGCCAACTTAGTAGTACT 58.461 41.667 8.14 8.14 33.17 2.73
5630 7256 6.684686 CAACACAGCCAACTTAGTAGTACTA 58.315 40.000 5.90 5.90 33.17 1.82
5631 7257 7.321153 CAACACAGCCAACTTAGTAGTACTAT 58.679 38.462 10.82 0.00 33.17 2.12
5632 7258 6.864342 ACACAGCCAACTTAGTAGTACTATG 58.136 40.000 17.46 17.46 33.17 2.23
5633 7259 6.436532 ACACAGCCAACTTAGTAGTACTATGT 59.563 38.462 18.52 18.52 39.73 2.29
5634 7260 7.613022 ACACAGCCAACTTAGTAGTACTATGTA 59.387 37.037 22.43 5.03 37.88 2.29
5635 7261 8.630917 CACAGCCAACTTAGTAGTACTATGTAT 58.369 37.037 22.43 13.44 37.88 2.29
5636 7262 9.198475 ACAGCCAACTTAGTAGTACTATGTATT 57.802 33.333 22.43 10.49 37.88 1.89
5665 7291 2.331194 CGACAAGTATTTTCGGACGGT 58.669 47.619 0.00 0.00 0.00 4.83
5666 7292 3.500982 CGACAAGTATTTTCGGACGGTA 58.499 45.455 0.00 0.00 0.00 4.02
5667 7293 4.107622 CGACAAGTATTTTCGGACGGTAT 58.892 43.478 0.00 0.00 0.00 2.73
5668 7294 4.027132 CGACAAGTATTTTCGGACGGTATG 60.027 45.833 0.00 0.00 0.00 2.39
5669 7295 4.824289 ACAAGTATTTTCGGACGGTATGT 58.176 39.130 0.00 0.00 0.00 2.29
5670 7296 5.964758 ACAAGTATTTTCGGACGGTATGTA 58.035 37.500 0.00 0.00 0.00 2.29
5671 7297 6.576185 ACAAGTATTTTCGGACGGTATGTAT 58.424 36.000 0.00 0.00 0.00 2.29
5672 7298 7.043565 ACAAGTATTTTCGGACGGTATGTATT 58.956 34.615 0.00 0.00 0.00 1.89
5673 7299 7.550196 ACAAGTATTTTCGGACGGTATGTATTT 59.450 33.333 0.00 0.00 0.00 1.40
5674 7300 9.033481 CAAGTATTTTCGGACGGTATGTATTTA 57.967 33.333 0.00 0.00 0.00 1.40
5675 7301 9.768662 AAGTATTTTCGGACGGTATGTATTTAT 57.231 29.630 0.00 0.00 0.00 1.40
5676 7302 9.768662 AGTATTTTCGGACGGTATGTATTTATT 57.231 29.630 0.00 0.00 0.00 1.40
5679 7305 8.721019 TTTTCGGACGGTATGTATTTATTTCT 57.279 30.769 0.00 0.00 0.00 2.52
5680 7306 8.721019 TTTCGGACGGTATGTATTTATTTCTT 57.279 30.769 0.00 0.00 0.00 2.52
5681 7307 7.935338 TCGGACGGTATGTATTTATTTCTTC 57.065 36.000 0.00 0.00 0.00 2.87
5682 7308 6.638063 TCGGACGGTATGTATTTATTTCTTCG 59.362 38.462 0.00 0.00 0.00 3.79
5683 7309 6.638063 CGGACGGTATGTATTTATTTCTTCGA 59.362 38.462 0.00 0.00 0.00 3.71
5684 7310 7.357859 CGGACGGTATGTATTTATTTCTTCGAC 60.358 40.741 0.00 0.00 0.00 4.20
5685 7311 7.650903 GGACGGTATGTATTTATTTCTTCGACT 59.349 37.037 0.00 0.00 0.00 4.18
5686 7312 9.669353 GACGGTATGTATTTATTTCTTCGACTA 57.331 33.333 0.00 0.00 0.00 2.59
5696 7322 5.796350 ATTTCTTCGACTATTTTGGGACG 57.204 39.130 0.00 0.00 0.00 4.79
5697 7323 3.241067 TCTTCGACTATTTTGGGACGG 57.759 47.619 0.00 0.00 0.00 4.79
5698 7324 2.827322 TCTTCGACTATTTTGGGACGGA 59.173 45.455 0.00 0.00 0.00 4.69
5699 7325 3.449737 TCTTCGACTATTTTGGGACGGAT 59.550 43.478 0.00 0.00 0.00 4.18
5700 7326 3.173668 TCGACTATTTTGGGACGGATG 57.826 47.619 0.00 0.00 0.00 3.51
5701 7327 2.159014 TCGACTATTTTGGGACGGATGG 60.159 50.000 0.00 0.00 0.00 3.51
5702 7328 2.159014 CGACTATTTTGGGACGGATGGA 60.159 50.000 0.00 0.00 0.00 3.41
5703 7329 3.467803 GACTATTTTGGGACGGATGGAG 58.532 50.000 0.00 0.00 0.00 3.86
5704 7330 2.844348 ACTATTTTGGGACGGATGGAGT 59.156 45.455 0.00 0.00 0.00 3.85
5705 7331 4.035112 ACTATTTTGGGACGGATGGAGTA 58.965 43.478 0.00 0.00 0.00 2.59
5706 7332 4.658901 ACTATTTTGGGACGGATGGAGTAT 59.341 41.667 0.00 0.00 0.00 2.12
5707 7333 3.275617 TTTTGGGACGGATGGAGTATG 57.724 47.619 0.00 0.00 0.00 2.39
5708 7334 1.874129 TTGGGACGGATGGAGTATGT 58.126 50.000 0.00 0.00 0.00 2.29
5709 7335 2.759839 TGGGACGGATGGAGTATGTA 57.240 50.000 0.00 0.00 0.00 2.29
5710 7336 3.254093 TGGGACGGATGGAGTATGTAT 57.746 47.619 0.00 0.00 0.00 2.29
5711 7337 3.583228 TGGGACGGATGGAGTATGTATT 58.417 45.455 0.00 0.00 0.00 1.89
5712 7338 3.971305 TGGGACGGATGGAGTATGTATTT 59.029 43.478 0.00 0.00 0.00 1.40
5713 7339 4.202315 TGGGACGGATGGAGTATGTATTTG 60.202 45.833 0.00 0.00 0.00 2.32
5714 7340 4.202326 GGGACGGATGGAGTATGTATTTGT 60.202 45.833 0.00 0.00 0.00 2.83
5715 7341 4.750098 GGACGGATGGAGTATGTATTTGTG 59.250 45.833 0.00 0.00 0.00 3.33
5716 7342 5.353394 ACGGATGGAGTATGTATTTGTGT 57.647 39.130 0.00 0.00 0.00 3.72
5717 7343 6.461927 GGACGGATGGAGTATGTATTTGTGTA 60.462 42.308 0.00 0.00 0.00 2.90
5718 7344 7.062749 ACGGATGGAGTATGTATTTGTGTAT 57.937 36.000 0.00 0.00 0.00 2.29
5719 7345 6.929049 ACGGATGGAGTATGTATTTGTGTATG 59.071 38.462 0.00 0.00 0.00 2.39
5720 7346 6.128553 CGGATGGAGTATGTATTTGTGTATGC 60.129 42.308 0.00 0.00 0.00 3.14
5721 7347 6.710295 GGATGGAGTATGTATTTGTGTATGCA 59.290 38.462 0.00 0.00 0.00 3.96
5722 7348 7.391554 GGATGGAGTATGTATTTGTGTATGCAT 59.608 37.037 3.79 3.79 35.45 3.96
5723 7349 7.495135 TGGAGTATGTATTTGTGTATGCATG 57.505 36.000 10.16 0.00 33.67 4.06
5724 7350 6.486320 TGGAGTATGTATTTGTGTATGCATGG 59.514 38.462 10.16 0.00 33.67 3.66
5725 7351 6.710295 GGAGTATGTATTTGTGTATGCATGGA 59.290 38.462 10.16 0.00 33.67 3.41
5726 7352 7.307989 GGAGTATGTATTTGTGTATGCATGGAC 60.308 40.741 10.16 6.21 33.67 4.02
5727 7353 4.873768 TGTATTTGTGTATGCATGGACG 57.126 40.909 10.16 0.00 0.00 4.79
5728 7354 3.625313 TGTATTTGTGTATGCATGGACGG 59.375 43.478 10.16 0.00 0.00 4.79
5729 7355 2.481289 TTTGTGTATGCATGGACGGA 57.519 45.000 10.16 0.00 0.00 4.69
5730 7356 2.708216 TTGTGTATGCATGGACGGAT 57.292 45.000 10.16 0.00 0.00 4.18
5731 7357 1.952193 TGTGTATGCATGGACGGATG 58.048 50.000 10.16 0.00 0.00 3.51
5732 7358 1.229428 GTGTATGCATGGACGGATGG 58.771 55.000 10.16 0.00 0.00 3.51
5733 7359 1.127343 TGTATGCATGGACGGATGGA 58.873 50.000 10.16 0.00 0.00 3.41
5734 7360 1.070601 TGTATGCATGGACGGATGGAG 59.929 52.381 10.16 0.00 0.00 3.86
5747 10019 4.127171 ACGGATGGAGTATGTATTTGTGC 58.873 43.478 0.00 0.00 0.00 4.57
5819 10091 2.273449 CCTCTGGGATGGTGCACC 59.727 66.667 29.67 29.67 33.58 5.01
5890 10162 2.456119 CGCACTGCCGGATGAAGAC 61.456 63.158 5.05 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 8.145714 GTGCATACACTCACTCGTATAAACGTA 61.146 40.741 0.00 0.00 45.32 3.57
7 8 7.378882 GTGCATACACTCACTCGTATAAACGT 61.379 42.308 0.00 0.00 45.32 3.99
8 9 5.052567 GTGCATACACTCACTCGTATAAACG 60.053 44.000 0.00 0.00 45.90 3.60
9 10 5.052567 CGTGCATACACTCACTCGTATAAAC 60.053 44.000 0.00 0.00 45.10 2.01
10 11 5.032220 CGTGCATACACTCACTCGTATAAA 58.968 41.667 0.00 0.00 45.10 1.40
11 12 4.095334 ACGTGCATACACTCACTCGTATAA 59.905 41.667 0.00 0.00 45.10 0.98
12 13 3.624410 ACGTGCATACACTCACTCGTATA 59.376 43.478 0.00 0.00 45.10 1.47
13 14 2.422479 ACGTGCATACACTCACTCGTAT 59.578 45.455 0.00 0.00 45.10 3.06
14 15 1.808343 ACGTGCATACACTCACTCGTA 59.192 47.619 0.00 0.00 45.10 3.43
15 16 0.596577 ACGTGCATACACTCACTCGT 59.403 50.000 0.00 0.00 45.10 4.18
16 17 0.984829 CACGTGCATACACTCACTCG 59.015 55.000 0.82 0.00 45.10 4.18
17 18 2.065993 ACACGTGCATACACTCACTC 57.934 50.000 17.22 0.00 45.10 3.51
18 19 3.868757 ATACACGTGCATACACTCACT 57.131 42.857 17.22 0.00 45.10 3.41
19 20 6.577800 GTCTATATACACGTGCATACACTCAC 59.422 42.308 17.22 2.91 45.10 3.51
20 21 6.565247 CGTCTATATACACGTGCATACACTCA 60.565 42.308 17.22 0.00 45.10 3.41
21 22 5.789021 CGTCTATATACACGTGCATACACTC 59.211 44.000 17.22 4.46 45.10 3.51
22 23 5.686834 CGTCTATATACACGTGCATACACT 58.313 41.667 17.22 0.36 45.10 3.55
23 24 4.320164 GCGTCTATATACACGTGCATACAC 59.680 45.833 17.22 9.43 43.76 2.90
24 25 4.214758 AGCGTCTATATACACGTGCATACA 59.785 41.667 17.22 0.13 38.32 2.29
25 26 4.720090 AGCGTCTATATACACGTGCATAC 58.280 43.478 17.22 2.28 38.32 2.39
26 27 5.151389 CAAGCGTCTATATACACGTGCATA 58.849 41.667 17.22 13.68 38.32 3.14
27 28 3.917329 AGCGTCTATATACACGTGCAT 57.083 42.857 17.22 11.52 38.32 3.96
28 29 3.368495 CAAGCGTCTATATACACGTGCA 58.632 45.455 17.22 2.06 38.32 4.57
29 30 2.153247 GCAAGCGTCTATATACACGTGC 59.847 50.000 17.22 10.28 38.32 5.34
30 31 2.400735 CGCAAGCGTCTATATACACGTG 59.599 50.000 15.48 15.48 38.32 4.49
31 32 2.647337 CGCAAGCGTCTATATACACGT 58.353 47.619 11.44 0.00 38.32 4.49
55 56 2.432510 TCAGTTTGGGGCATTCGTTTTT 59.567 40.909 0.00 0.00 0.00 1.94
59 60 1.698506 TTTCAGTTTGGGGCATTCGT 58.301 45.000 0.00 0.00 0.00 3.85
82 83 0.930310 CAGATACCGTGACATTGCCG 59.070 55.000 0.00 0.00 0.00 5.69
124 130 2.260869 CGTGTTGCTTGAGGTGGGG 61.261 63.158 0.00 0.00 0.00 4.96
259 288 4.800914 GCCTTACTCGTGGATGAATATGCT 60.801 45.833 0.00 0.00 0.00 3.79
269 298 1.271163 CCAAAAGGCCTTACTCGTGGA 60.271 52.381 20.84 0.00 0.00 4.02
270 299 1.165270 CCAAAAGGCCTTACTCGTGG 58.835 55.000 20.84 16.62 0.00 4.94
271 300 1.892209 ACCAAAAGGCCTTACTCGTG 58.108 50.000 20.84 11.69 0.00 4.35
272 301 2.651382 AACCAAAAGGCCTTACTCGT 57.349 45.000 20.84 9.95 0.00 4.18
273 302 2.882137 TGAAACCAAAAGGCCTTACTCG 59.118 45.455 20.84 9.27 0.00 4.18
274 303 4.262036 CCTTGAAACCAAAAGGCCTTACTC 60.262 45.833 20.84 9.59 36.78 2.59
275 304 3.641436 CCTTGAAACCAAAAGGCCTTACT 59.359 43.478 20.84 6.27 36.78 2.24
276 305 3.639561 TCCTTGAAACCAAAAGGCCTTAC 59.360 43.478 20.84 5.33 42.35 2.34
277 306 3.895041 CTCCTTGAAACCAAAAGGCCTTA 59.105 43.478 20.84 0.00 42.35 2.69
278 307 2.700371 CTCCTTGAAACCAAAAGGCCTT 59.300 45.455 13.78 13.78 42.35 4.35
279 308 2.319844 CTCCTTGAAACCAAAAGGCCT 58.680 47.619 0.00 0.00 42.35 5.19
280 309 2.039418 ACTCCTTGAAACCAAAAGGCC 58.961 47.619 0.00 0.00 42.35 5.19
281 310 3.819564 AACTCCTTGAAACCAAAAGGC 57.180 42.857 0.00 0.00 42.35 4.35
282 311 5.337578 TGAAACTCCTTGAAACCAAAAGG 57.662 39.130 0.00 0.00 43.72 3.11
283 312 8.940768 TTTATGAAACTCCTTGAAACCAAAAG 57.059 30.769 0.00 0.00 0.00 2.27
284 313 9.726438 TTTTTATGAAACTCCTTGAAACCAAAA 57.274 25.926 0.00 0.00 0.00 2.44
285 314 9.898152 ATTTTTATGAAACTCCTTGAAACCAAA 57.102 25.926 0.00 0.00 0.00 3.28
286 315 9.898152 AATTTTTATGAAACTCCTTGAAACCAA 57.102 25.926 0.00 0.00 0.00 3.67
287 316 9.541143 GAATTTTTATGAAACTCCTTGAAACCA 57.459 29.630 0.00 0.00 0.00 3.67
288 317 9.764363 AGAATTTTTATGAAACTCCTTGAAACC 57.236 29.630 0.00 0.00 0.00 3.27
335 364 8.126871 ACGAAAAAGCTTTAAAGGAAACAATC 57.873 30.769 13.10 0.00 0.00 2.67
336 365 8.487313 AACGAAAAAGCTTTAAAGGAAACAAT 57.513 26.923 13.10 0.00 0.00 2.71
337 366 7.892778 AACGAAAAAGCTTTAAAGGAAACAA 57.107 28.000 13.10 0.00 0.00 2.83
338 367 7.892778 AAACGAAAAAGCTTTAAAGGAAACA 57.107 28.000 13.10 0.00 0.00 2.83
351 380 9.967245 GGAATCCATTTTTATAAACGAAAAAGC 57.033 29.630 0.00 0.00 38.71 3.51
443 472 6.729690 TTGATTGACACCAAGGAGATTTTT 57.270 33.333 0.00 0.00 35.48 1.94
444 473 6.729690 TTTGATTGACACCAAGGAGATTTT 57.270 33.333 0.00 0.00 35.48 1.82
445 474 6.494491 TCATTTGATTGACACCAAGGAGATTT 59.506 34.615 0.00 0.00 35.48 2.17
446 475 6.012113 TCATTTGATTGACACCAAGGAGATT 58.988 36.000 0.00 0.00 35.48 2.40
447 476 5.416952 GTCATTTGATTGACACCAAGGAGAT 59.583 40.000 0.00 0.00 44.38 2.75
448 477 4.761739 GTCATTTGATTGACACCAAGGAGA 59.238 41.667 0.00 0.00 44.38 3.71
449 478 5.051891 GTCATTTGATTGACACCAAGGAG 57.948 43.478 0.00 0.00 44.38 3.69
458 487 8.369218 AGGAAACAAAATGTCATTTGATTGAC 57.631 30.769 11.54 6.32 45.05 3.18
468 497 9.010029 GGAGTAAGAATAGGAAACAAAATGTCA 57.990 33.333 0.00 0.00 0.00 3.58
469 498 9.232473 AGGAGTAAGAATAGGAAACAAAATGTC 57.768 33.333 0.00 0.00 0.00 3.06
472 501 9.907229 CCTAGGAGTAAGAATAGGAAACAAAAT 57.093 33.333 1.05 0.00 37.57 1.82
473 502 9.108111 TCCTAGGAGTAAGAATAGGAAACAAAA 57.892 33.333 7.62 0.00 40.60 2.44
474 503 8.674925 TCCTAGGAGTAAGAATAGGAAACAAA 57.325 34.615 7.62 0.00 40.60 2.83
475 504 8.855804 ATCCTAGGAGTAAGAATAGGAAACAA 57.144 34.615 18.34 0.00 45.18 2.83
476 505 8.855804 AATCCTAGGAGTAAGAATAGGAAACA 57.144 34.615 18.34 0.00 45.18 2.83
477 506 9.549078 CAAATCCTAGGAGTAAGAATAGGAAAC 57.451 37.037 18.34 0.00 45.18 2.78
478 507 9.502035 TCAAATCCTAGGAGTAAGAATAGGAAA 57.498 33.333 18.34 0.00 45.18 3.13
479 508 9.148879 CTCAAATCCTAGGAGTAAGAATAGGAA 57.851 37.037 18.34 0.00 45.18 3.36
480 509 8.511969 TCTCAAATCCTAGGAGTAAGAATAGGA 58.488 37.037 18.34 7.26 45.88 2.94
481 510 8.713708 TCTCAAATCCTAGGAGTAAGAATAGG 57.286 38.462 18.34 5.19 36.85 2.57
484 513 9.661954 TGTATCTCAAATCCTAGGAGTAAGAAT 57.338 33.333 21.36 15.40 0.00 2.40
485 514 9.661954 ATGTATCTCAAATCCTAGGAGTAAGAA 57.338 33.333 21.36 10.73 0.00 2.52
486 515 9.083422 CATGTATCTCAAATCCTAGGAGTAAGA 57.917 37.037 20.34 20.34 0.00 2.10
487 516 8.865090 ACATGTATCTCAAATCCTAGGAGTAAG 58.135 37.037 18.34 15.15 0.00 2.34
488 517 8.783660 ACATGTATCTCAAATCCTAGGAGTAA 57.216 34.615 18.34 5.87 0.00 2.24
489 518 8.004801 TGACATGTATCTCAAATCCTAGGAGTA 58.995 37.037 18.34 0.00 0.00 2.59
490 519 6.841229 TGACATGTATCTCAAATCCTAGGAGT 59.159 38.462 18.34 12.51 0.00 3.85
491 520 7.295322 TGACATGTATCTCAAATCCTAGGAG 57.705 40.000 18.34 3.73 0.00 3.69
492 521 7.732140 AGATGACATGTATCTCAAATCCTAGGA 59.268 37.037 15.46 15.46 29.05 2.94
493 522 7.905265 AGATGACATGTATCTCAAATCCTAGG 58.095 38.462 0.82 0.82 29.05 3.02
494 523 8.984891 GAGATGACATGTATCTCAAATCCTAG 57.015 38.462 24.95 0.00 46.22 3.02
503 532 8.363390 TGTAGGAAATGAGATGACATGTATCTC 58.637 37.037 24.04 24.04 46.82 2.75
504 533 8.255111 TGTAGGAAATGAGATGACATGTATCT 57.745 34.615 14.05 14.05 37.59 1.98
505 534 8.893219 TTGTAGGAAATGAGATGACATGTATC 57.107 34.615 0.00 2.87 0.00 2.24
506 535 9.685276 TTTTGTAGGAAATGAGATGACATGTAT 57.315 29.630 0.00 0.00 0.00 2.29
507 536 9.685276 ATTTTGTAGGAAATGAGATGACATGTA 57.315 29.630 0.00 0.00 0.00 2.29
508 537 8.585471 ATTTTGTAGGAAATGAGATGACATGT 57.415 30.769 0.00 0.00 0.00 3.21
509 538 9.512435 GAATTTTGTAGGAAATGAGATGACATG 57.488 33.333 0.00 0.00 30.06 3.21
510 539 8.689972 GGAATTTTGTAGGAAATGAGATGACAT 58.310 33.333 0.00 0.00 30.06 3.06
511 540 7.890127 AGGAATTTTGTAGGAAATGAGATGACA 59.110 33.333 0.00 0.00 30.06 3.58
512 541 8.286191 AGGAATTTTGTAGGAAATGAGATGAC 57.714 34.615 0.00 0.00 30.06 3.06
516 545 9.408648 GGAATAGGAATTTTGTAGGAAATGAGA 57.591 33.333 0.00 0.00 30.06 3.27
517 546 9.413734 AGGAATAGGAATTTTGTAGGAAATGAG 57.586 33.333 0.00 0.00 30.06 2.90
520 549 9.338622 CGTAGGAATAGGAATTTTGTAGGAAAT 57.661 33.333 0.00 0.00 0.00 2.17
521 550 8.542080 TCGTAGGAATAGGAATTTTGTAGGAAA 58.458 33.333 0.00 0.00 0.00 3.13
522 551 8.081517 TCGTAGGAATAGGAATTTTGTAGGAA 57.918 34.615 0.00 0.00 0.00 3.36
523 552 7.664552 TCGTAGGAATAGGAATTTTGTAGGA 57.335 36.000 0.00 0.00 0.00 2.94
524 553 9.991906 TTATCGTAGGAATAGGAATTTTGTAGG 57.008 33.333 0.00 0.00 0.00 3.18
527 556 9.503399 GGATTATCGTAGGAATAGGAATTTTGT 57.497 33.333 0.00 0.00 0.00 2.83
528 557 9.726438 AGGATTATCGTAGGAATAGGAATTTTG 57.274 33.333 0.00 0.00 0.00 2.44
532 561 9.369672 GGATAGGATTATCGTAGGAATAGGAAT 57.630 37.037 1.23 0.00 37.20 3.01
533 562 8.566979 AGGATAGGATTATCGTAGGAATAGGAA 58.433 37.037 1.23 0.00 37.20 3.36
534 563 8.115490 AGGATAGGATTATCGTAGGAATAGGA 57.885 38.462 1.23 0.00 37.20 2.94
549 578 9.746457 GCCTCTTTTGATTTATAGGATAGGATT 57.254 33.333 0.00 0.00 0.00 3.01
550 579 8.043710 CGCCTCTTTTGATTTATAGGATAGGAT 58.956 37.037 0.00 0.00 0.00 3.24
551 580 7.016268 ACGCCTCTTTTGATTTATAGGATAGGA 59.984 37.037 0.00 0.00 0.00 2.94
552 581 7.162082 ACGCCTCTTTTGATTTATAGGATAGG 58.838 38.462 0.00 0.00 0.00 2.57
553 582 9.706691 TTACGCCTCTTTTGATTTATAGGATAG 57.293 33.333 0.00 0.00 0.00 2.08
555 584 9.574516 AATTACGCCTCTTTTGATTTATAGGAT 57.425 29.630 0.00 0.00 0.00 3.24
556 585 8.836413 CAATTACGCCTCTTTTGATTTATAGGA 58.164 33.333 0.00 0.00 0.00 2.94
557 586 8.621286 ACAATTACGCCTCTTTTGATTTATAGG 58.379 33.333 0.00 0.00 0.00 2.57
559 588 9.997482 GAACAATTACGCCTCTTTTGATTTATA 57.003 29.630 0.00 0.00 0.00 0.98
560 589 8.519526 TGAACAATTACGCCTCTTTTGATTTAT 58.480 29.630 0.00 0.00 0.00 1.40
561 590 7.877003 TGAACAATTACGCCTCTTTTGATTTA 58.123 30.769 0.00 0.00 0.00 1.40
562 591 6.744112 TGAACAATTACGCCTCTTTTGATTT 58.256 32.000 0.00 0.00 0.00 2.17
563 592 6.325919 TGAACAATTACGCCTCTTTTGATT 57.674 33.333 0.00 0.00 0.00 2.57
564 593 5.957842 TGAACAATTACGCCTCTTTTGAT 57.042 34.783 0.00 0.00 0.00 2.57
565 594 5.957842 ATGAACAATTACGCCTCTTTTGA 57.042 34.783 0.00 0.00 0.00 2.69
566 595 6.088085 GTGAATGAACAATTACGCCTCTTTTG 59.912 38.462 0.00 0.00 0.00 2.44
567 596 6.149633 GTGAATGAACAATTACGCCTCTTTT 58.850 36.000 0.00 0.00 0.00 2.27
568 597 5.335661 GGTGAATGAACAATTACGCCTCTTT 60.336 40.000 0.00 0.00 0.00 2.52
569 598 4.156008 GGTGAATGAACAATTACGCCTCTT 59.844 41.667 0.00 0.00 0.00 2.85
570 599 3.689649 GGTGAATGAACAATTACGCCTCT 59.310 43.478 0.00 0.00 0.00 3.69
571 600 3.181500 GGGTGAATGAACAATTACGCCTC 60.181 47.826 0.00 0.00 31.74 4.70
572 601 2.752903 GGGTGAATGAACAATTACGCCT 59.247 45.455 0.00 0.00 31.74 5.52
573 602 2.490115 TGGGTGAATGAACAATTACGCC 59.510 45.455 0.00 0.00 0.00 5.68
574 603 3.190535 AGTGGGTGAATGAACAATTACGC 59.809 43.478 0.00 0.00 0.00 4.42
575 604 4.695455 AGAGTGGGTGAATGAACAATTACG 59.305 41.667 0.00 0.00 0.00 3.18
602 633 2.423446 GGACGGCTGGCTAGGATG 59.577 66.667 0.00 0.00 0.00 3.51
765 797 2.619646 CCTCCTTCTACTAGTCTTCGGC 59.380 54.545 0.00 0.00 0.00 5.54
843 885 1.341581 CCTCTCCCTCTCGTTCTCCTT 60.342 57.143 0.00 0.00 0.00 3.36
1095 1157 2.231380 GGGAGTTGAGGGGAGGCAA 61.231 63.158 0.00 0.00 0.00 4.52
1098 1160 1.690985 GAGGGGAGTTGAGGGGAGG 60.691 68.421 0.00 0.00 0.00 4.30
1099 1161 1.690985 GGAGGGGAGTTGAGGGGAG 60.691 68.421 0.00 0.00 0.00 4.30
1100 1162 2.454941 GGAGGGGAGTTGAGGGGA 59.545 66.667 0.00 0.00 0.00 4.81
1101 1163 2.692741 GGGAGGGGAGTTGAGGGG 60.693 72.222 0.00 0.00 0.00 4.79
1102 1164 2.692741 GGGGAGGGGAGTTGAGGG 60.693 72.222 0.00 0.00 0.00 4.30
1103 1165 1.690985 GAGGGGAGGGGAGTTGAGG 60.691 68.421 0.00 0.00 0.00 3.86
1104 1166 1.690985 GGAGGGGAGGGGAGTTGAG 60.691 68.421 0.00 0.00 0.00 3.02
1105 1167 2.454941 GGAGGGGAGGGGAGTTGA 59.545 66.667 0.00 0.00 0.00 3.18
1106 1168 2.692741 GGGAGGGGAGGGGAGTTG 60.693 72.222 0.00 0.00 0.00 3.16
1107 1169 4.040198 GGGGAGGGGAGGGGAGTT 62.040 72.222 0.00 0.00 0.00 3.01
1144 1206 2.753966 CGGAGCCAAACCATCAGCG 61.754 63.158 0.00 0.00 0.00 5.18
1205 1273 2.096406 CCGAAATCACACGCGCTG 59.904 61.111 5.73 6.58 0.00 5.18
1220 1288 3.313007 TACGAACTCGCGACCACCG 62.313 63.158 3.71 9.29 44.43 4.94
1331 1399 5.411361 TGATCCGCCGAATTATTAATGAAGG 59.589 40.000 0.00 0.00 0.00 3.46
1332 1400 6.147821 ACTGATCCGCCGAATTATTAATGAAG 59.852 38.462 0.00 0.00 0.00 3.02
1336 1404 5.334879 GCAACTGATCCGCCGAATTATTAAT 60.335 40.000 0.00 0.00 0.00 1.40
1339 1408 2.290641 GCAACTGATCCGCCGAATTATT 59.709 45.455 0.00 0.00 0.00 1.40
1359 1428 1.605712 GGATCCACAGCCTATGTACGC 60.606 57.143 6.95 0.00 41.41 4.42
1364 1433 0.320247 GCGAGGATCCACAGCCTATG 60.320 60.000 15.82 0.00 39.13 2.23
1365 1434 1.810606 CGCGAGGATCCACAGCCTAT 61.811 60.000 15.82 0.00 39.13 2.57
1432 1548 3.546617 CAGTCGACGCAGATCATACTAC 58.453 50.000 10.46 0.00 0.00 2.73
1489 1611 3.614588 GTTTGCCTCGTTGACAAAGTAC 58.385 45.455 0.98 0.00 34.19 2.73
1539 1662 2.673368 CTGTAAGCATTCGTCCAACTCC 59.327 50.000 0.00 0.00 0.00 3.85
1605 1983 3.226346 TCCAGACGAAAACATACCGAG 57.774 47.619 0.00 0.00 0.00 4.63
1628 2007 5.055144 CCTCATGACTAATGTGATCCACTG 58.945 45.833 0.00 0.00 37.56 3.66
1725 2125 3.376234 CAGTAGAACCAGAATGCATGTGG 59.624 47.826 21.62 21.62 37.38 4.17
1882 2425 4.919677 AAAGTTCAAAAACAAAGCCACG 57.080 36.364 0.00 0.00 37.88 4.94
1993 2537 1.517832 CACTGAGGGTAGGGCTTCG 59.482 63.158 0.00 0.00 0.00 3.79
2104 2694 0.694105 ATAAAAATGGGGCAGGGGGC 60.694 55.000 0.00 0.00 43.74 5.80
2158 2748 1.018148 TTGTGGTGGCTTTACACACG 58.982 50.000 0.00 0.00 43.99 4.49
2184 2774 1.069204 CGATACCCTCTGGATGTGTGG 59.931 57.143 0.00 0.00 34.81 4.17
2192 2783 6.941436 AGTTACTATAAGTCGATACCCTCTGG 59.059 42.308 0.00 0.00 37.80 3.86
2195 2786 6.206243 TGCAGTTACTATAAGTCGATACCCTC 59.794 42.308 0.00 0.00 0.00 4.30
2367 2959 2.892852 TGTTCTCAAATTTCTGCCCTGG 59.107 45.455 0.00 0.00 0.00 4.45
2451 3050 4.982295 CCATATTAGTTGTCGCTGATTCGA 59.018 41.667 0.00 0.00 35.95 3.71
2452 3051 4.982295 TCCATATTAGTTGTCGCTGATTCG 59.018 41.667 0.00 0.00 0.00 3.34
2453 3052 6.562270 CGTTCCATATTAGTTGTCGCTGATTC 60.562 42.308 0.00 0.00 0.00 2.52
2486 3141 6.865726 CCTCTTACATGCTACTACACATCATC 59.134 42.308 0.00 0.00 0.00 2.92
2572 3227 5.597594 AGGCCACCTCTTACATACTACTAAC 59.402 44.000 5.01 0.00 0.00 2.34
2672 3327 6.648192 TCCAAAAATTATATGGGTTTGCAGG 58.352 36.000 4.73 0.00 34.89 4.85
2709 3365 3.844640 ACCAGTTTACCCATGCTTCTTT 58.155 40.909 0.00 0.00 0.00 2.52
2710 3366 3.525800 ACCAGTTTACCCATGCTTCTT 57.474 42.857 0.00 0.00 0.00 2.52
2756 3412 6.099701 ACCAAATGCATACAGTAGGATAGTGA 59.900 38.462 0.00 0.00 44.82 3.41
2761 3417 5.116084 ACACCAAATGCATACAGTAGGAT 57.884 39.130 0.00 0.00 0.00 3.24
2982 3645 9.249457 TGAGTACATAATAAAGAATCTCAAGCG 57.751 33.333 0.00 0.00 0.00 4.68
3085 3864 7.266756 CGAAAGCAAACAAATGAATGCAAATAC 59.733 33.333 14.23 0.00 41.18 1.89
3111 3890 5.005586 CGCATGAAATCAGAAGAGAGAAGAC 59.994 44.000 0.00 0.00 0.00 3.01
3116 3895 6.215121 AGTATCGCATGAAATCAGAAGAGAG 58.785 40.000 0.00 0.00 0.00 3.20
3298 4174 4.374843 GCATCATGCATCACCTACAAAA 57.625 40.909 4.20 0.00 44.26 2.44
3386 4262 6.498304 CATAATGCTATTTCACCACAAGTCC 58.502 40.000 0.00 0.00 0.00 3.85
3430 4306 5.011533 AGCTTATAATCAGGACAGCCACTAG 59.988 44.000 0.00 0.00 36.29 2.57
3709 4897 8.724229 CATAACAACAGAACAATCTCAATCTCA 58.276 33.333 0.00 0.00 32.03 3.27
3759 4959 0.531311 TGCTCCTCATACTGCATGCG 60.531 55.000 14.09 10.50 34.35 4.73
3938 5140 7.972832 ATCTAAATTTCCTGTTCACACGTTA 57.027 32.000 0.00 0.00 0.00 3.18
3971 5173 7.671819 TGTCAATGGGGATTTCTAAACATACAA 59.328 33.333 0.00 0.00 0.00 2.41
3982 5184 5.946377 GGGAGTATATGTCAATGGGGATTTC 59.054 44.000 0.00 0.00 0.00 2.17
3984 5210 5.173246 AGGGAGTATATGTCAATGGGGATT 58.827 41.667 0.00 0.00 0.00 3.01
4000 5226 9.364653 GACTTATATTTAGGAACTGAGGGAGTA 57.635 37.037 0.00 0.00 41.52 2.59
4001 5227 8.068733 AGACTTATATTTAGGAACTGAGGGAGT 58.931 37.037 0.00 0.00 41.52 3.85
4002 5228 8.485578 AGACTTATATTTAGGAACTGAGGGAG 57.514 38.462 0.00 0.00 41.52 4.30
4003 5229 8.855804 AAGACTTATATTTAGGAACTGAGGGA 57.144 34.615 0.00 0.00 41.52 4.20
4004 5230 9.907229 AAAAGACTTATATTTAGGAACTGAGGG 57.093 33.333 0.00 0.00 41.52 4.30
4038 5264 5.391256 ACTCCGTATGTAGTCCATATTGGA 58.609 41.667 0.00 0.00 45.98 3.53
4039 5265 5.723672 ACTCCGTATGTAGTCCATATTGG 57.276 43.478 0.00 0.00 38.29 3.16
4040 5266 9.706691 ATTTTACTCCGTATGTAGTCCATATTG 57.293 33.333 0.00 0.00 38.29 1.90
4041 5267 9.706691 CATTTTACTCCGTATGTAGTCCATATT 57.293 33.333 0.00 0.00 38.29 1.28
4042 5268 9.085645 TCATTTTACTCCGTATGTAGTCCATAT 57.914 33.333 0.00 0.00 38.29 1.78
4043 5269 8.467963 TCATTTTACTCCGTATGTAGTCCATA 57.532 34.615 0.00 0.00 34.86 2.74
4044 5270 7.069578 ACTCATTTTACTCCGTATGTAGTCCAT 59.930 37.037 0.00 0.00 37.58 3.41
4045 5271 6.379133 ACTCATTTTACTCCGTATGTAGTCCA 59.621 38.462 0.00 0.00 0.00 4.02
4046 5272 6.696148 CACTCATTTTACTCCGTATGTAGTCC 59.304 42.308 0.00 0.00 0.00 3.85
4047 5273 7.478322 TCACTCATTTTACTCCGTATGTAGTC 58.522 38.462 0.00 0.00 0.00 2.59
4048 5274 7.400599 TCACTCATTTTACTCCGTATGTAGT 57.599 36.000 0.00 0.00 0.00 2.73
4049 5275 8.873215 ATTCACTCATTTTACTCCGTATGTAG 57.127 34.615 0.00 0.00 0.00 2.74
4050 5276 8.692710 AGATTCACTCATTTTACTCCGTATGTA 58.307 33.333 0.00 0.00 0.00 2.29
4051 5277 7.556844 AGATTCACTCATTTTACTCCGTATGT 58.443 34.615 0.00 0.00 0.00 2.29
4052 5278 8.969267 GTAGATTCACTCATTTTACTCCGTATG 58.031 37.037 0.00 0.00 0.00 2.39
4053 5279 8.692710 TGTAGATTCACTCATTTTACTCCGTAT 58.307 33.333 0.00 0.00 0.00 3.06
4054 5280 7.972277 GTGTAGATTCACTCATTTTACTCCGTA 59.028 37.037 0.00 0.00 35.68 4.02
4055 5281 6.812160 GTGTAGATTCACTCATTTTACTCCGT 59.188 38.462 0.00 0.00 35.68 4.69
4056 5282 7.036220 AGTGTAGATTCACTCATTTTACTCCG 58.964 38.462 0.00 0.00 44.07 4.63
4133 5359 8.591072 CCTCCGTTCCTAAATATTATAAGTCCA 58.409 37.037 0.00 0.00 0.00 4.02
4134 5360 8.039538 CCCTCCGTTCCTAAATATTATAAGTCC 58.960 40.741 0.00 0.00 0.00 3.85
4135 5361 8.810041 TCCCTCCGTTCCTAAATATTATAAGTC 58.190 37.037 0.00 0.00 0.00 3.01
4136 5362 8.731591 TCCCTCCGTTCCTAAATATTATAAGT 57.268 34.615 0.00 0.00 0.00 2.24
4137 5363 8.813951 ACTCCCTCCGTTCCTAAATATTATAAG 58.186 37.037 0.00 0.00 0.00 1.73
4138 5364 8.731591 ACTCCCTCCGTTCCTAAATATTATAA 57.268 34.615 0.00 0.00 0.00 0.98
4139 5365 9.827198 TTACTCCCTCCGTTCCTAAATATTATA 57.173 33.333 0.00 0.00 0.00 0.98
4140 5366 8.731591 TTACTCCCTCCGTTCCTAAATATTAT 57.268 34.615 0.00 0.00 0.00 1.28
4141 5367 8.731591 ATTACTCCCTCCGTTCCTAAATATTA 57.268 34.615 0.00 0.00 0.00 0.98
4142 5368 7.628501 ATTACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
4143 5369 8.731591 TTATTACTCCCTCCGTTCCTAAATAT 57.268 34.615 0.00 0.00 0.00 1.28
4144 5370 8.731591 ATTATTACTCCCTCCGTTCCTAAATA 57.268 34.615 0.00 0.00 0.00 1.40
4145 5371 7.628501 ATTATTACTCCCTCCGTTCCTAAAT 57.371 36.000 0.00 0.00 0.00 1.40
4146 5372 8.551682 TTATTATTACTCCCTCCGTTCCTAAA 57.448 34.615 0.00 0.00 0.00 1.85
4147 5373 8.551682 TTTATTATTACTCCCTCCGTTCCTAA 57.448 34.615 0.00 0.00 0.00 2.69
4148 5374 8.006564 TCTTTATTATTACTCCCTCCGTTCCTA 58.993 37.037 0.00 0.00 0.00 2.94
4149 5375 6.842807 TCTTTATTATTACTCCCTCCGTTCCT 59.157 38.462 0.00 0.00 0.00 3.36
4150 5376 7.059202 TCTTTATTATTACTCCCTCCGTTCC 57.941 40.000 0.00 0.00 0.00 3.62
4151 5377 8.953368 TTTCTTTATTATTACTCCCTCCGTTC 57.047 34.615 0.00 0.00 0.00 3.95
4152 5378 7.991460 CCTTTCTTTATTATTACTCCCTCCGTT 59.009 37.037 0.00 0.00 0.00 4.44
4153 5379 7.346436 TCCTTTCTTTATTATTACTCCCTCCGT 59.654 37.037 0.00 0.00 0.00 4.69
4154 5380 7.656542 GTCCTTTCTTTATTATTACTCCCTCCG 59.343 40.741 0.00 0.00 0.00 4.63
4155 5381 7.937942 GGTCCTTTCTTTATTATTACTCCCTCC 59.062 40.741 0.00 0.00 0.00 4.30
4156 5382 7.937942 GGGTCCTTTCTTTATTATTACTCCCTC 59.062 40.741 0.00 0.00 0.00 4.30
4157 5383 7.632164 AGGGTCCTTTCTTTATTATTACTCCCT 59.368 37.037 0.00 0.00 33.98 4.20
4158 5384 7.720074 CAGGGTCCTTTCTTTATTATTACTCCC 59.280 40.741 0.00 0.00 0.00 4.30
4159 5385 8.491958 TCAGGGTCCTTTCTTTATTATTACTCC 58.508 37.037 0.00 0.00 0.00 3.85
4206 5432 2.743752 CGGAGTTGCCATGTGCTCG 61.744 63.158 7.54 0.00 42.00 5.03
4210 5436 1.227999 ACGTTCGGAGTTGCCATGTG 61.228 55.000 0.00 0.00 35.94 3.21
4229 5455 6.090129 GCATAACTAAACTTGCCATCGAAAA 58.910 36.000 0.00 0.00 0.00 2.29
4230 5456 5.636837 GCATAACTAAACTTGCCATCGAAA 58.363 37.500 0.00 0.00 0.00 3.46
4234 5460 4.260784 CCTCGCATAACTAAACTTGCCATC 60.261 45.833 0.00 0.00 0.00 3.51
4251 5477 3.565961 TTGCCTTGGCATCCTCGCA 62.566 57.895 15.58 0.00 0.00 5.10
4289 5519 2.159435 ACACGGCAAGTTTCTGTCAAAC 60.159 45.455 0.00 0.00 0.00 2.93
4294 5524 1.014352 GTGACACGGCAAGTTTCTGT 58.986 50.000 0.00 0.00 31.12 3.41
4336 5568 6.051348 ACGTTTTTCGATGGCAATTCCAGT 62.051 41.667 0.00 0.00 45.10 4.00
4377 5609 0.255890 AAGTGCCACAAGTCAGGTGT 59.744 50.000 0.00 0.00 34.46 4.16
4411 5643 5.406780 CGTCACACTTCTATGCTTCTTTTCT 59.593 40.000 0.00 0.00 0.00 2.52
4417 5649 3.575630 TGACGTCACACTTCTATGCTTC 58.424 45.455 15.76 0.00 0.00 3.86
4418 5650 3.660501 TGACGTCACACTTCTATGCTT 57.339 42.857 15.76 0.00 0.00 3.91
4448 5680 7.947890 TGGGTAAACAGGACAAAATTATCTCTT 59.052 33.333 0.00 0.00 0.00 2.85
4681 5914 3.713858 TGCAAGACCACAAACATCAAG 57.286 42.857 0.00 0.00 0.00 3.02
4695 5928 6.707440 TCACATTTTCCTTAACTTGCAAGA 57.293 33.333 32.50 8.75 0.00 3.02
4793 6026 9.927668 ATGAATTATTTGAGAACCGTTGAATTT 57.072 25.926 0.00 0.00 0.00 1.82
5007 6611 7.115553 CGCATATCAGCTAATCATTGTTATCG 58.884 38.462 0.00 0.00 0.00 2.92
5024 6631 3.959535 TCCAGCATATCACGCATATCA 57.040 42.857 0.00 0.00 0.00 2.15
5147 6754 8.797350 ATATCTGATGATCAAATATTGCCGAA 57.203 30.769 0.00 0.00 34.32 4.30
5321 6930 4.718940 TCGACAGCAAACATCTCAGATA 57.281 40.909 0.00 0.00 0.00 1.98
5352 6961 2.942376 ACAGCAAACATTCAACACGAGA 59.058 40.909 0.00 0.00 0.00 4.04
5356 6965 5.339990 AGTTGTACAGCAAACATTCAACAC 58.660 37.500 12.54 0.00 39.03 3.32
5391 7000 6.782082 TCACTTCTCAAGCTACATATCAGT 57.218 37.500 0.00 0.00 0.00 3.41
5392 7001 6.645827 CCATCACTTCTCAAGCTACATATCAG 59.354 42.308 0.00 0.00 0.00 2.90
5393 7002 6.098838 ACCATCACTTCTCAAGCTACATATCA 59.901 38.462 0.00 0.00 0.00 2.15
5395 7004 6.491714 ACCATCACTTCTCAAGCTACATAT 57.508 37.500 0.00 0.00 0.00 1.78
5397 7006 4.833478 ACCATCACTTCTCAAGCTACAT 57.167 40.909 0.00 0.00 0.00 2.29
5398 7007 4.284490 AGAACCATCACTTCTCAAGCTACA 59.716 41.667 0.00 0.00 0.00 2.74
5399 7008 4.629200 CAGAACCATCACTTCTCAAGCTAC 59.371 45.833 0.00 0.00 0.00 3.58
5400 7009 4.528206 TCAGAACCATCACTTCTCAAGCTA 59.472 41.667 0.00 0.00 0.00 3.32
5567 7191 2.244510 TCTGGGAGAGAGAGAGCAGAAT 59.755 50.000 0.00 0.00 0.00 2.40
5568 7192 1.638070 TCTGGGAGAGAGAGAGCAGAA 59.362 52.381 0.00 0.00 0.00 3.02
5569 7193 1.294041 TCTGGGAGAGAGAGAGCAGA 58.706 55.000 0.00 0.00 0.00 4.26
5570 7194 1.958579 CATCTGGGAGAGAGAGAGCAG 59.041 57.143 0.00 0.00 32.80 4.24
5572 7196 2.363306 TCATCTGGGAGAGAGAGAGC 57.637 55.000 0.00 0.00 32.80 4.09
5573 7197 6.494491 ACAATAATCATCTGGGAGAGAGAGAG 59.506 42.308 0.00 0.00 32.80 3.20
5574 7198 6.267242 CACAATAATCATCTGGGAGAGAGAGA 59.733 42.308 0.00 0.00 32.80 3.10
5645 7271 2.331194 ACCGTCCGAAAATACTTGTCG 58.669 47.619 0.00 0.00 34.58 4.35
5646 7272 4.866486 ACATACCGTCCGAAAATACTTGTC 59.134 41.667 0.00 0.00 0.00 3.18
5647 7273 4.824289 ACATACCGTCCGAAAATACTTGT 58.176 39.130 0.00 0.00 0.00 3.16
5648 7274 7.473027 AATACATACCGTCCGAAAATACTTG 57.527 36.000 0.00 0.00 0.00 3.16
5649 7275 9.768662 ATAAATACATACCGTCCGAAAATACTT 57.231 29.630 0.00 0.00 0.00 2.24
5650 7276 9.768662 AATAAATACATACCGTCCGAAAATACT 57.231 29.630 0.00 0.00 0.00 2.12
5653 7279 9.333724 AGAAATAAATACATACCGTCCGAAAAT 57.666 29.630 0.00 0.00 0.00 1.82
5654 7280 8.721019 AGAAATAAATACATACCGTCCGAAAA 57.279 30.769 0.00 0.00 0.00 2.29
5655 7281 8.721019 AAGAAATAAATACATACCGTCCGAAA 57.279 30.769 0.00 0.00 0.00 3.46
5656 7282 7.167968 CGAAGAAATAAATACATACCGTCCGAA 59.832 37.037 0.00 0.00 0.00 4.30
5657 7283 6.638063 CGAAGAAATAAATACATACCGTCCGA 59.362 38.462 0.00 0.00 0.00 4.55
5658 7284 6.638063 TCGAAGAAATAAATACATACCGTCCG 59.362 38.462 0.00 0.00 0.00 4.79
5659 7285 7.650903 AGTCGAAGAAATAAATACATACCGTCC 59.349 37.037 0.00 0.00 39.69 4.79
5660 7286 8.571461 AGTCGAAGAAATAAATACATACCGTC 57.429 34.615 0.00 0.00 39.69 4.79
5670 7296 8.395633 CGTCCCAAAATAGTCGAAGAAATAAAT 58.604 33.333 0.00 0.00 39.69 1.40
5671 7297 7.148373 CCGTCCCAAAATAGTCGAAGAAATAAA 60.148 37.037 0.00 0.00 39.69 1.40
5672 7298 6.314400 CCGTCCCAAAATAGTCGAAGAAATAA 59.686 38.462 0.00 0.00 39.69 1.40
5673 7299 5.813672 CCGTCCCAAAATAGTCGAAGAAATA 59.186 40.000 0.00 0.00 39.69 1.40
5674 7300 4.634443 CCGTCCCAAAATAGTCGAAGAAAT 59.366 41.667 0.00 0.00 39.69 2.17
5675 7301 3.998341 CCGTCCCAAAATAGTCGAAGAAA 59.002 43.478 0.00 0.00 39.69 2.52
5676 7302 3.258872 TCCGTCCCAAAATAGTCGAAGAA 59.741 43.478 0.00 0.00 39.69 2.52
5677 7303 2.827322 TCCGTCCCAAAATAGTCGAAGA 59.173 45.455 0.00 0.00 0.00 2.87
5678 7304 3.241067 TCCGTCCCAAAATAGTCGAAG 57.759 47.619 0.00 0.00 0.00 3.79
5679 7305 3.527533 CATCCGTCCCAAAATAGTCGAA 58.472 45.455 0.00 0.00 0.00 3.71
5680 7306 2.159014 CCATCCGTCCCAAAATAGTCGA 60.159 50.000 0.00 0.00 0.00 4.20
5681 7307 2.159014 TCCATCCGTCCCAAAATAGTCG 60.159 50.000 0.00 0.00 0.00 4.18
5682 7308 3.118371 ACTCCATCCGTCCCAAAATAGTC 60.118 47.826 0.00 0.00 0.00 2.59
5683 7309 2.844348 ACTCCATCCGTCCCAAAATAGT 59.156 45.455 0.00 0.00 0.00 2.12
5684 7310 3.560636 ACTCCATCCGTCCCAAAATAG 57.439 47.619 0.00 0.00 0.00 1.73
5685 7311 4.410883 ACATACTCCATCCGTCCCAAAATA 59.589 41.667 0.00 0.00 0.00 1.40
5686 7312 3.202151 ACATACTCCATCCGTCCCAAAAT 59.798 43.478 0.00 0.00 0.00 1.82
5687 7313 2.574369 ACATACTCCATCCGTCCCAAAA 59.426 45.455 0.00 0.00 0.00 2.44
5688 7314 2.193127 ACATACTCCATCCGTCCCAAA 58.807 47.619 0.00 0.00 0.00 3.28
5689 7315 1.874129 ACATACTCCATCCGTCCCAA 58.126 50.000 0.00 0.00 0.00 4.12
5690 7316 2.759839 TACATACTCCATCCGTCCCA 57.240 50.000 0.00 0.00 0.00 4.37
5691 7317 4.202326 ACAAATACATACTCCATCCGTCCC 60.202 45.833 0.00 0.00 0.00 4.46
5692 7318 4.750098 CACAAATACATACTCCATCCGTCC 59.250 45.833 0.00 0.00 0.00 4.79
5693 7319 5.357257 ACACAAATACATACTCCATCCGTC 58.643 41.667 0.00 0.00 0.00 4.79
5694 7320 5.353394 ACACAAATACATACTCCATCCGT 57.647 39.130 0.00 0.00 0.00 4.69
5695 7321 6.128553 GCATACACAAATACATACTCCATCCG 60.129 42.308 0.00 0.00 0.00 4.18
5696 7322 6.710295 TGCATACACAAATACATACTCCATCC 59.290 38.462 0.00 0.00 0.00 3.51
5697 7323 7.728847 TGCATACACAAATACATACTCCATC 57.271 36.000 0.00 0.00 0.00 3.51
5698 7324 7.175467 CCATGCATACACAAATACATACTCCAT 59.825 37.037 0.00 0.00 0.00 3.41
5699 7325 6.486320 CCATGCATACACAAATACATACTCCA 59.514 38.462 0.00 0.00 0.00 3.86
5700 7326 6.710295 TCCATGCATACACAAATACATACTCC 59.290 38.462 0.00 0.00 0.00 3.85
5701 7327 7.569408 CGTCCATGCATACACAAATACATACTC 60.569 40.741 0.00 0.00 0.00 2.59
5702 7328 6.202762 CGTCCATGCATACACAAATACATACT 59.797 38.462 0.00 0.00 0.00 2.12
5703 7329 6.362686 CGTCCATGCATACACAAATACATAC 58.637 40.000 0.00 0.00 0.00 2.39
5704 7330 5.468409 CCGTCCATGCATACACAAATACATA 59.532 40.000 0.00 0.00 0.00 2.29
5705 7331 4.275689 CCGTCCATGCATACACAAATACAT 59.724 41.667 0.00 0.00 0.00 2.29
5706 7332 3.625313 CCGTCCATGCATACACAAATACA 59.375 43.478 0.00 0.00 0.00 2.29
5707 7333 3.874543 TCCGTCCATGCATACACAAATAC 59.125 43.478 0.00 0.00 0.00 1.89
5708 7334 4.143986 TCCGTCCATGCATACACAAATA 57.856 40.909 0.00 0.00 0.00 1.40
5709 7335 2.997980 TCCGTCCATGCATACACAAAT 58.002 42.857 0.00 0.00 0.00 2.32
5710 7336 2.481289 TCCGTCCATGCATACACAAA 57.519 45.000 0.00 0.00 0.00 2.83
5711 7337 2.287769 CATCCGTCCATGCATACACAA 58.712 47.619 0.00 0.00 0.00 3.33
5712 7338 1.474855 CCATCCGTCCATGCATACACA 60.475 52.381 0.00 0.00 0.00 3.72
5713 7339 1.202639 TCCATCCGTCCATGCATACAC 60.203 52.381 0.00 0.00 0.00 2.90
5714 7340 1.070601 CTCCATCCGTCCATGCATACA 59.929 52.381 0.00 0.00 0.00 2.29
5715 7341 1.070758 ACTCCATCCGTCCATGCATAC 59.929 52.381 0.00 0.00 0.00 2.39
5716 7342 1.423584 ACTCCATCCGTCCATGCATA 58.576 50.000 0.00 0.00 0.00 3.14
5717 7343 1.423584 TACTCCATCCGTCCATGCAT 58.576 50.000 0.00 0.00 0.00 3.96
5718 7344 1.070601 CATACTCCATCCGTCCATGCA 59.929 52.381 0.00 0.00 0.00 3.96
5719 7345 1.070758 ACATACTCCATCCGTCCATGC 59.929 52.381 0.00 0.00 0.00 4.06
5720 7346 4.808414 ATACATACTCCATCCGTCCATG 57.192 45.455 0.00 0.00 0.00 3.66
5721 7347 5.071788 ACAAATACATACTCCATCCGTCCAT 59.928 40.000 0.00 0.00 0.00 3.41
5722 7348 4.407621 ACAAATACATACTCCATCCGTCCA 59.592 41.667 0.00 0.00 0.00 4.02
5723 7349 4.750098 CACAAATACATACTCCATCCGTCC 59.250 45.833 0.00 0.00 0.00 4.79
5724 7350 4.211374 GCACAAATACATACTCCATCCGTC 59.789 45.833 0.00 0.00 0.00 4.79
5725 7351 4.127171 GCACAAATACATACTCCATCCGT 58.873 43.478 0.00 0.00 0.00 4.69
5726 7352 4.126437 TGCACAAATACATACTCCATCCG 58.874 43.478 0.00 0.00 0.00 4.18
5727 7353 5.563475 GCATGCACAAATACATACTCCATCC 60.563 44.000 14.21 0.00 0.00 3.51
5728 7354 5.008911 TGCATGCACAAATACATACTCCATC 59.991 40.000 18.46 0.00 0.00 3.51
5729 7355 4.888823 TGCATGCACAAATACATACTCCAT 59.111 37.500 18.46 0.00 0.00 3.41
5730 7356 4.268359 TGCATGCACAAATACATACTCCA 58.732 39.130 18.46 0.00 0.00 3.86
5731 7357 4.898829 TGCATGCACAAATACATACTCC 57.101 40.909 18.46 0.00 0.00 3.85
5732 7358 5.684184 CACATGCATGCACAAATACATACTC 59.316 40.000 25.37 0.00 0.00 2.59
5733 7359 5.450826 CCACATGCATGCACAAATACATACT 60.451 40.000 25.37 0.00 0.00 2.12
5734 7360 4.741185 CCACATGCATGCACAAATACATAC 59.259 41.667 25.37 0.00 0.00 2.39
5819 10091 2.279517 GCCTACGGCCTCATCGTG 60.280 66.667 0.00 0.00 44.06 4.35
5837 10109 1.546476 GACGACTTCCTCACACTGGAT 59.454 52.381 0.00 0.00 33.09 3.41
5843 10115 0.827925 AGCTGGACGACTTCCTCACA 60.828 55.000 0.00 0.00 46.10 3.58
6095 10367 2.380410 CGTGCCGCTGTACAACCTC 61.380 63.158 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.