Multiple sequence alignment - TraesCS2A01G343700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G343700 chr2A 100.000 2324 0 0 1 2324 580508712 580511035 0.000000e+00 4292.0
1 TraesCS2A01G343700 chr2A 89.020 929 85 11 1406 2321 580388698 580389622 0.000000e+00 1134.0
2 TraesCS2A01G343700 chr2A 87.846 938 91 16 1406 2324 561594269 561595202 0.000000e+00 1079.0
3 TraesCS2A01G343700 chr2A 94.737 399 21 0 1013 1411 419794900 419794502 2.540000e-174 621.0
4 TraesCS2A01G343700 chr2D 92.551 886 60 6 1 885 375739974 375740854 0.000000e+00 1266.0
5 TraesCS2A01G343700 chr2D 95.477 398 18 0 1014 1411 33931021 33931418 9.060000e-179 636.0
6 TraesCS2A01G343700 chr6D 92.446 887 60 7 1 885 128874840 128875721 0.000000e+00 1260.0
7 TraesCS2A01G343700 chr6D 92.099 886 60 6 1 885 315781405 315782281 0.000000e+00 1240.0
8 TraesCS2A01G343700 chr6D 94.262 122 7 0 889 1010 389244626 389244505 1.100000e-43 187.0
9 TraesCS2A01G343700 chr1D 92.316 885 62 4 1 885 69087079 69087957 0.000000e+00 1253.0
10 TraesCS2A01G343700 chr1D 92.221 887 64 5 1 885 367767097 367767980 0.000000e+00 1251.0
11 TraesCS2A01G343700 chr1D 94.089 406 23 1 1014 1418 180357708 180358113 1.180000e-172 616.0
12 TraesCS2A01G343700 chr1D 95.082 122 6 0 889 1010 254380805 254380684 2.360000e-45 193.0
13 TraesCS2A01G343700 chr1B 92.230 888 61 5 1 885 434076341 434077223 0.000000e+00 1251.0
14 TraesCS2A01G343700 chr5A 92.099 886 65 5 1 885 86650937 86651818 0.000000e+00 1243.0
15 TraesCS2A01G343700 chr3D 92.090 885 65 3 1 885 424068711 424067832 0.000000e+00 1242.0
16 TraesCS2A01G343700 chr3D 91.977 885 68 2 1 885 279226457 279225576 0.000000e+00 1238.0
17 TraesCS2A01G343700 chr3D 88.191 940 86 17 1406 2324 502300959 502301894 0.000000e+00 1098.0
18 TraesCS2A01G343700 chr3D 88.034 936 89 22 1406 2324 302680753 302681682 0.000000e+00 1086.0
19 TraesCS2A01G343700 chr7D 88.593 938 85 13 1406 2324 433329320 433330254 0.000000e+00 1120.0
20 TraesCS2A01G343700 chr7D 87.768 932 96 13 1406 2324 91578335 91577409 0.000000e+00 1074.0
21 TraesCS2A01G343700 chr7D 92.913 127 9 0 884 1010 88643844 88643970 3.940000e-43 185.0
22 TraesCS2A01G343700 chr7D 92.913 127 9 0 884 1010 231564138 231564012 3.940000e-43 185.0
23 TraesCS2A01G343700 chr4D 88.185 931 89 16 1406 2320 32551395 32552320 0.000000e+00 1090.0
24 TraesCS2A01G343700 chr2B 88.534 907 86 12 1408 2299 486923182 486924085 0.000000e+00 1083.0
25 TraesCS2A01G343700 chr2B 93.750 128 8 0 883 1010 1453231 1453104 2.360000e-45 193.0
26 TraesCS2A01G343700 chr3B 87.714 936 90 22 1406 2324 117953634 117954561 0.000000e+00 1068.0
27 TraesCS2A01G343700 chr3B 95.729 398 17 0 1014 1411 201491689 201491292 1.950000e-180 641.0
28 TraesCS2A01G343700 chr3B 92.969 128 9 0 883 1010 201616146 201616273 1.100000e-43 187.0
29 TraesCS2A01G343700 chr3B 97.727 44 1 0 2281 2324 405882034 405882077 2.480000e-10 76.8
30 TraesCS2A01G343700 chrUn 95.980 398 16 0 1014 1411 432961813 432962210 0.000000e+00 647.0
31 TraesCS2A01G343700 chr5D 95.980 398 16 0 1014 1411 6237213 6237610 0.000000e+00 647.0
32 TraesCS2A01G343700 chr5D 95.477 398 18 0 1014 1411 503329597 503329200 9.060000e-179 636.0
33 TraesCS2A01G343700 chr4A 95.729 398 17 0 1014 1411 141128927 141128530 1.950000e-180 641.0
34 TraesCS2A01G343700 chr1A 95.729 398 17 0 1014 1411 554449259 554449656 1.950000e-180 641.0
35 TraesCS2A01G343700 chr1A 92.913 127 9 0 884 1010 532074882 532075008 3.940000e-43 185.0
36 TraesCS2A01G343700 chr5B 92.969 128 9 0 883 1010 127809623 127809750 1.100000e-43 187.0
37 TraesCS2A01G343700 chr5B 92.913 127 9 0 884 1010 44990092 44990218 3.940000e-43 185.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G343700 chr2A 580508712 580511035 2323 False 4292 4292 100.000 1 2324 1 chr2A.!!$F3 2323
1 TraesCS2A01G343700 chr2A 580388698 580389622 924 False 1134 1134 89.020 1406 2321 1 chr2A.!!$F2 915
2 TraesCS2A01G343700 chr2A 561594269 561595202 933 False 1079 1079 87.846 1406 2324 1 chr2A.!!$F1 918
3 TraesCS2A01G343700 chr2D 375739974 375740854 880 False 1266 1266 92.551 1 885 1 chr2D.!!$F2 884
4 TraesCS2A01G343700 chr6D 128874840 128875721 881 False 1260 1260 92.446 1 885 1 chr6D.!!$F1 884
5 TraesCS2A01G343700 chr6D 315781405 315782281 876 False 1240 1240 92.099 1 885 1 chr6D.!!$F2 884
6 TraesCS2A01G343700 chr1D 69087079 69087957 878 False 1253 1253 92.316 1 885 1 chr1D.!!$F1 884
7 TraesCS2A01G343700 chr1D 367767097 367767980 883 False 1251 1251 92.221 1 885 1 chr1D.!!$F3 884
8 TraesCS2A01G343700 chr1B 434076341 434077223 882 False 1251 1251 92.230 1 885 1 chr1B.!!$F1 884
9 TraesCS2A01G343700 chr5A 86650937 86651818 881 False 1243 1243 92.099 1 885 1 chr5A.!!$F1 884
10 TraesCS2A01G343700 chr3D 424067832 424068711 879 True 1242 1242 92.090 1 885 1 chr3D.!!$R2 884
11 TraesCS2A01G343700 chr3D 279225576 279226457 881 True 1238 1238 91.977 1 885 1 chr3D.!!$R1 884
12 TraesCS2A01G343700 chr3D 502300959 502301894 935 False 1098 1098 88.191 1406 2324 1 chr3D.!!$F2 918
13 TraesCS2A01G343700 chr3D 302680753 302681682 929 False 1086 1086 88.034 1406 2324 1 chr3D.!!$F1 918
14 TraesCS2A01G343700 chr7D 433329320 433330254 934 False 1120 1120 88.593 1406 2324 1 chr7D.!!$F2 918
15 TraesCS2A01G343700 chr7D 91577409 91578335 926 True 1074 1074 87.768 1406 2324 1 chr7D.!!$R1 918
16 TraesCS2A01G343700 chr4D 32551395 32552320 925 False 1090 1090 88.185 1406 2320 1 chr4D.!!$F1 914
17 TraesCS2A01G343700 chr2B 486923182 486924085 903 False 1083 1083 88.534 1408 2299 1 chr2B.!!$F1 891
18 TraesCS2A01G343700 chr3B 117953634 117954561 927 False 1068 1068 87.714 1406 2324 1 chr3B.!!$F1 918

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 700 0.17904 GTTGGTCCGGTCCACTTCAA 60.179 55.0 20.69 2.12 37.2 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1803 1831 0.326238 AGGATTCGGCCTACTTGGGA 60.326 55.0 0.0 0.0 36.22 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 152 6.005823 TGCTTTTGATCTCCATCTTCAAAGA 58.994 36.000 0.00 0.00 39.67 2.52
154 155 8.033626 GCTTTTGATCTCCATCTTCAAAGAATT 58.966 33.333 0.00 0.00 39.67 2.17
211 212 1.521450 CTCCATCATTGCATCGGGGC 61.521 60.000 0.00 0.00 0.00 5.80
236 237 4.938226 GTCTTGCCAACTATTGCTTCTACT 59.062 41.667 0.00 0.00 0.00 2.57
243 244 8.265055 TGCCAACTATTGCTTCTACTACTATTT 58.735 33.333 0.00 0.00 0.00 1.40
275 276 7.534239 GCATAGCGATAAAGTAAAGCAATTACC 59.466 37.037 8.34 0.00 44.17 2.85
322 323 2.632763 AGAGACAACCCTAAGGCTCT 57.367 50.000 0.00 0.00 36.11 4.09
411 413 6.000246 ACCATATCACATCACAACATACCA 58.000 37.500 0.00 0.00 0.00 3.25
442 444 7.516198 AACAAGTTAGACGTCCTCTACTTTA 57.484 36.000 13.01 0.00 30.56 1.85
445 447 9.236006 ACAAGTTAGACGTCCTCTACTTTATTA 57.764 33.333 13.01 0.00 30.56 0.98
613 618 3.626924 GACACCCGTCAGCCACCT 61.627 66.667 0.00 0.00 42.13 4.00
663 668 1.003839 GGAACCGGTCTCATGTGCA 60.004 57.895 8.04 0.00 0.00 4.57
686 691 1.002773 GACATGTAAGGTTGGTCCGGT 59.997 52.381 0.00 0.00 41.99 5.28
689 694 0.763604 TGTAAGGTTGGTCCGGTCCA 60.764 55.000 17.04 17.04 41.99 4.02
695 700 0.179040 GTTGGTCCGGTCCACTTCAA 60.179 55.000 20.69 2.12 37.20 2.69
706 711 3.482436 GTCCACTTCAACCCACAATACA 58.518 45.455 0.00 0.00 0.00 2.29
707 712 4.079253 GTCCACTTCAACCCACAATACAT 58.921 43.478 0.00 0.00 0.00 2.29
793 799 6.262273 TGTTCTACTCGTGCATATCATCTACA 59.738 38.462 0.00 0.00 0.00 2.74
847 854 6.405176 GGAAACATTGCATGGAAAACCAAAAA 60.405 34.615 2.94 0.00 33.60 1.94
880 887 3.190744 CACATGCAAGATCTATCCATGGC 59.809 47.826 23.14 10.11 38.02 4.40
894 901 1.957668 CATGGCGATGGAAGATGTCA 58.042 50.000 0.00 0.00 0.00 3.58
895 902 1.871676 CATGGCGATGGAAGATGTCAG 59.128 52.381 0.00 0.00 0.00 3.51
896 903 0.462581 TGGCGATGGAAGATGTCAGC 60.463 55.000 0.00 0.00 0.00 4.26
897 904 1.493950 GGCGATGGAAGATGTCAGCG 61.494 60.000 0.00 0.00 44.27 5.18
898 905 1.493950 GCGATGGAAGATGTCAGCGG 61.494 60.000 0.00 0.00 42.14 5.52
899 906 0.179100 CGATGGAAGATGTCAGCGGT 60.179 55.000 0.00 0.00 38.84 5.68
900 907 1.740380 CGATGGAAGATGTCAGCGGTT 60.740 52.381 0.00 0.00 38.84 4.44
901 908 1.936547 GATGGAAGATGTCAGCGGTTC 59.063 52.381 0.00 0.00 0.00 3.62
902 909 0.684535 TGGAAGATGTCAGCGGTTCA 59.315 50.000 0.00 0.00 0.00 3.18
903 910 1.071542 TGGAAGATGTCAGCGGTTCAA 59.928 47.619 0.00 0.00 0.00 2.69
904 911 1.734465 GGAAGATGTCAGCGGTTCAAG 59.266 52.381 0.00 0.00 0.00 3.02
905 912 2.417719 GAAGATGTCAGCGGTTCAAGT 58.582 47.619 0.00 0.00 0.00 3.16
906 913 2.550830 AGATGTCAGCGGTTCAAGTT 57.449 45.000 0.00 0.00 0.00 2.66
907 914 2.417719 AGATGTCAGCGGTTCAAGTTC 58.582 47.619 0.00 0.00 0.00 3.01
908 915 1.126846 GATGTCAGCGGTTCAAGTTCG 59.873 52.381 0.00 0.00 0.00 3.95
914 921 2.437308 GCGGTTCAAGTTCGCTTATC 57.563 50.000 0.00 0.00 45.16 1.75
915 922 2.000447 GCGGTTCAAGTTCGCTTATCT 59.000 47.619 0.00 0.00 45.16 1.98
916 923 2.029365 GCGGTTCAAGTTCGCTTATCTC 59.971 50.000 0.00 0.00 45.16 2.75
917 924 3.512680 CGGTTCAAGTTCGCTTATCTCT 58.487 45.455 0.00 0.00 35.31 3.10
918 925 4.669318 CGGTTCAAGTTCGCTTATCTCTA 58.331 43.478 0.00 0.00 35.31 2.43
919 926 4.735822 CGGTTCAAGTTCGCTTATCTCTAG 59.264 45.833 0.00 0.00 35.31 2.43
920 927 4.504826 GGTTCAAGTTCGCTTATCTCTAGC 59.495 45.833 0.00 0.00 35.31 3.42
921 928 4.308899 TCAAGTTCGCTTATCTCTAGCC 57.691 45.455 0.00 0.00 35.31 3.93
922 929 3.068307 TCAAGTTCGCTTATCTCTAGCCC 59.932 47.826 0.00 0.00 35.31 5.19
923 930 1.609555 AGTTCGCTTATCTCTAGCCCG 59.390 52.381 0.00 0.00 35.18 6.13
924 931 1.337387 GTTCGCTTATCTCTAGCCCGT 59.663 52.381 0.00 0.00 35.18 5.28
925 932 0.952280 TCGCTTATCTCTAGCCCGTG 59.048 55.000 0.00 0.00 35.18 4.94
926 933 0.952280 CGCTTATCTCTAGCCCGTGA 59.048 55.000 0.00 0.00 35.18 4.35
927 934 1.337071 CGCTTATCTCTAGCCCGTGAA 59.663 52.381 0.00 0.00 35.18 3.18
928 935 2.745102 GCTTATCTCTAGCCCGTGAAC 58.255 52.381 0.00 0.00 32.45 3.18
929 936 2.362717 GCTTATCTCTAGCCCGTGAACT 59.637 50.000 0.00 0.00 32.45 3.01
930 937 3.181474 GCTTATCTCTAGCCCGTGAACTT 60.181 47.826 0.00 0.00 32.45 2.66
931 938 4.037684 GCTTATCTCTAGCCCGTGAACTTA 59.962 45.833 0.00 0.00 32.45 2.24
932 939 5.764131 CTTATCTCTAGCCCGTGAACTTAG 58.236 45.833 0.00 0.00 0.00 2.18
933 940 1.749634 TCTCTAGCCCGTGAACTTAGC 59.250 52.381 0.00 0.00 0.00 3.09
934 941 0.454600 TCTAGCCCGTGAACTTAGCG 59.545 55.000 0.00 0.00 0.00 4.26
935 942 0.527817 CTAGCCCGTGAACTTAGCGG 60.528 60.000 0.00 0.00 44.55 5.52
947 954 8.823584 CGTGAACTTAGCGGATACTATTATAG 57.176 38.462 0.00 0.00 0.00 1.31
948 955 7.428761 CGTGAACTTAGCGGATACTATTATAGC 59.571 40.741 0.00 0.00 0.00 2.97
949 956 7.428761 GTGAACTTAGCGGATACTATTATAGCG 59.571 40.741 0.00 0.00 30.61 4.26
950 957 7.335171 TGAACTTAGCGGATACTATTATAGCGA 59.665 37.037 0.00 0.00 30.61 4.93
951 958 7.804843 ACTTAGCGGATACTATTATAGCGAT 57.195 36.000 0.00 0.00 30.61 4.58
952 959 8.899427 ACTTAGCGGATACTATTATAGCGATA 57.101 34.615 0.00 0.00 30.61 2.92
953 960 8.991026 ACTTAGCGGATACTATTATAGCGATAG 58.009 37.037 0.00 0.00 34.11 2.08
967 974 2.105323 CGATAGCACCGAATTTTGCC 57.895 50.000 4.51 0.00 39.75 4.52
968 975 1.400142 CGATAGCACCGAATTTTGCCA 59.600 47.619 4.51 0.00 39.75 4.92
969 976 2.159448 CGATAGCACCGAATTTTGCCAA 60.159 45.455 4.51 0.00 39.75 4.52
970 977 3.489059 CGATAGCACCGAATTTTGCCAAT 60.489 43.478 4.51 0.45 39.75 3.16
971 978 2.837532 AGCACCGAATTTTGCCAATT 57.162 40.000 4.51 0.00 39.75 2.32
972 979 2.687370 AGCACCGAATTTTGCCAATTC 58.313 42.857 7.95 7.95 39.75 2.17
981 988 6.151975 GAATTTTGCCAATTCGGTAGTTTG 57.848 37.500 3.42 0.00 36.97 2.93
982 989 4.920640 TTTTGCCAATTCGGTAGTTTGA 57.079 36.364 0.00 0.00 36.97 2.69
983 990 5.461032 TTTTGCCAATTCGGTAGTTTGAT 57.539 34.783 0.00 0.00 36.97 2.57
984 991 4.695217 TTGCCAATTCGGTAGTTTGATC 57.305 40.909 0.00 0.00 36.97 2.92
985 992 3.950397 TGCCAATTCGGTAGTTTGATCT 58.050 40.909 0.00 0.00 36.97 2.75
986 993 5.092554 TGCCAATTCGGTAGTTTGATCTA 57.907 39.130 0.00 0.00 36.97 1.98
987 994 5.680619 TGCCAATTCGGTAGTTTGATCTAT 58.319 37.500 0.00 0.00 36.97 1.98
988 995 5.527214 TGCCAATTCGGTAGTTTGATCTATG 59.473 40.000 0.00 0.00 36.97 2.23
989 996 5.758296 GCCAATTCGGTAGTTTGATCTATGA 59.242 40.000 0.00 0.00 36.97 2.15
990 997 6.428159 GCCAATTCGGTAGTTTGATCTATGAT 59.572 38.462 0.00 0.00 36.97 2.45
991 998 7.041098 GCCAATTCGGTAGTTTGATCTATGATT 60.041 37.037 0.00 0.00 36.97 2.57
992 999 8.840321 CCAATTCGGTAGTTTGATCTATGATTT 58.160 33.333 0.00 0.00 0.00 2.17
993 1000 9.869844 CAATTCGGTAGTTTGATCTATGATTTC 57.130 33.333 0.00 0.00 0.00 2.17
994 1001 9.613428 AATTCGGTAGTTTGATCTATGATTTCA 57.387 29.630 0.00 0.00 0.00 2.69
995 1002 8.420374 TTCGGTAGTTTGATCTATGATTTCAC 57.580 34.615 0.00 0.00 0.00 3.18
996 1003 7.552459 TCGGTAGTTTGATCTATGATTTCACA 58.448 34.615 0.00 0.00 0.00 3.58
997 1004 8.204160 TCGGTAGTTTGATCTATGATTTCACAT 58.796 33.333 0.00 0.00 0.00 3.21
998 1005 8.830580 CGGTAGTTTGATCTATGATTTCACATT 58.169 33.333 0.00 0.00 0.00 2.71
1003 1010 9.459640 GTTTGATCTATGATTTCACATTCATGG 57.540 33.333 0.00 0.00 34.52 3.66
1004 1011 8.983702 TTGATCTATGATTTCACATTCATGGA 57.016 30.769 0.00 2.18 41.93 3.41
1005 1012 9.582648 TTGATCTATGATTTCACATTCATGGAT 57.417 29.630 10.36 10.36 46.73 3.41
1006 1013 9.010029 TGATCTATGATTTCACATTCATGGATG 57.990 33.333 12.75 12.75 45.17 3.51
1007 1014 8.935614 ATCTATGATTTCACATTCATGGATGT 57.064 30.769 14.26 14.26 44.19 3.06
1008 1015 8.756486 TCTATGATTTCACATTCATGGATGTT 57.244 30.769 17.42 2.58 38.15 2.71
1009 1016 8.626526 TCTATGATTTCACATTCATGGATGTTG 58.373 33.333 17.42 12.52 38.15 3.33
1010 1017 5.968254 TGATTTCACATTCATGGATGTTGG 58.032 37.500 17.42 7.47 38.15 3.77
1011 1018 5.715753 TGATTTCACATTCATGGATGTTGGA 59.284 36.000 17.42 9.79 38.15 3.53
1012 1019 6.381707 TGATTTCACATTCATGGATGTTGGAT 59.618 34.615 17.42 10.62 38.15 3.41
1013 1020 5.840243 TTCACATTCATGGATGTTGGATC 57.160 39.130 17.42 0.00 38.15 3.36
1014 1021 5.120054 TCACATTCATGGATGTTGGATCT 57.880 39.130 17.42 0.00 38.15 2.75
1015 1022 5.512298 TCACATTCATGGATGTTGGATCTT 58.488 37.500 17.42 0.00 38.15 2.40
1016 1023 6.661777 TCACATTCATGGATGTTGGATCTTA 58.338 36.000 17.42 0.00 38.15 2.10
1017 1024 7.292319 TCACATTCATGGATGTTGGATCTTAT 58.708 34.615 17.42 0.00 38.15 1.73
1018 1025 7.229907 TCACATTCATGGATGTTGGATCTTATG 59.770 37.037 17.42 2.45 38.15 1.90
1019 1026 7.229907 CACATTCATGGATGTTGGATCTTATGA 59.770 37.037 17.42 0.00 38.15 2.15
1020 1027 7.948447 ACATTCATGGATGTTGGATCTTATGAT 59.052 33.333 14.26 0.00 36.92 2.45
1021 1028 7.754851 TTCATGGATGTTGGATCTTATGATG 57.245 36.000 0.00 0.00 32.19 3.07
1022 1029 6.844829 TCATGGATGTTGGATCTTATGATGT 58.155 36.000 0.00 0.00 32.19 3.06
1023 1030 7.976712 TCATGGATGTTGGATCTTATGATGTA 58.023 34.615 0.00 0.00 32.19 2.29
1024 1031 8.098912 TCATGGATGTTGGATCTTATGATGTAG 58.901 37.037 0.00 0.00 32.19 2.74
1025 1032 6.233434 TGGATGTTGGATCTTATGATGTAGC 58.767 40.000 0.00 0.00 32.19 3.58
1026 1033 6.183361 TGGATGTTGGATCTTATGATGTAGCA 60.183 38.462 0.00 0.00 32.19 3.49
1027 1034 6.148480 GGATGTTGGATCTTATGATGTAGCAC 59.852 42.308 0.00 0.00 32.19 4.40
1028 1035 5.368145 TGTTGGATCTTATGATGTAGCACC 58.632 41.667 0.00 0.00 32.19 5.01
1029 1036 4.623932 TGGATCTTATGATGTAGCACCC 57.376 45.455 0.00 0.00 32.19 4.61
1030 1037 3.006859 TGGATCTTATGATGTAGCACCCG 59.993 47.826 0.00 0.00 32.19 5.28
1031 1038 3.589988 GATCTTATGATGTAGCACCCGG 58.410 50.000 0.00 0.00 32.19 5.73
1032 1039 2.394632 TCTTATGATGTAGCACCCGGT 58.605 47.619 0.00 0.00 0.00 5.28
1033 1040 2.102420 TCTTATGATGTAGCACCCGGTG 59.898 50.000 13.71 13.71 36.51 4.94
1034 1041 0.756294 TATGATGTAGCACCCGGTGG 59.244 55.000 19.41 1.32 33.64 4.61
1035 1042 0.980754 ATGATGTAGCACCCGGTGGA 60.981 55.000 19.41 0.00 33.64 4.02
1036 1043 0.980754 TGATGTAGCACCCGGTGGAT 60.981 55.000 19.41 1.56 33.64 3.41
1037 1044 1.045407 GATGTAGCACCCGGTGGATA 58.955 55.000 19.41 0.59 33.64 2.59
1038 1045 1.623811 GATGTAGCACCCGGTGGATAT 59.376 52.381 19.41 0.00 33.64 1.63
1039 1046 1.502690 TGTAGCACCCGGTGGATATT 58.497 50.000 19.41 0.00 33.64 1.28
1040 1047 1.841277 TGTAGCACCCGGTGGATATTT 59.159 47.619 19.41 0.00 33.64 1.40
1041 1048 3.039743 TGTAGCACCCGGTGGATATTTA 58.960 45.455 19.41 0.00 33.64 1.40
1042 1049 2.930826 AGCACCCGGTGGATATTTAG 57.069 50.000 19.41 0.00 33.64 1.85
1043 1050 1.202770 AGCACCCGGTGGATATTTAGC 60.203 52.381 19.41 1.13 33.64 3.09
1044 1051 1.202770 GCACCCGGTGGATATTTAGCT 60.203 52.381 19.41 0.00 33.64 3.32
1045 1052 2.038033 GCACCCGGTGGATATTTAGCTA 59.962 50.000 19.41 0.00 33.64 3.32
1046 1053 3.864921 GCACCCGGTGGATATTTAGCTAG 60.865 52.174 19.41 0.00 33.64 3.42
1047 1054 2.302157 ACCCGGTGGATATTTAGCTAGC 59.698 50.000 6.62 6.62 34.81 3.42
1048 1055 2.301870 CCCGGTGGATATTTAGCTAGCA 59.698 50.000 18.83 0.00 0.00 3.49
1049 1056 3.055094 CCCGGTGGATATTTAGCTAGCAT 60.055 47.826 18.83 4.24 0.00 3.79
1050 1057 3.935203 CCGGTGGATATTTAGCTAGCATG 59.065 47.826 18.83 0.00 0.00 4.06
1051 1058 4.563580 CCGGTGGATATTTAGCTAGCATGT 60.564 45.833 18.83 0.00 0.00 3.21
1052 1059 5.337250 CCGGTGGATATTTAGCTAGCATGTA 60.337 44.000 18.83 4.61 0.00 2.29
1053 1060 6.341316 CGGTGGATATTTAGCTAGCATGTAT 58.659 40.000 18.83 9.32 0.00 2.29
1054 1061 6.477033 CGGTGGATATTTAGCTAGCATGTATC 59.523 42.308 18.83 16.60 0.00 2.24
1055 1062 7.331026 GGTGGATATTTAGCTAGCATGTATCA 58.669 38.462 18.83 2.71 0.00 2.15
1056 1063 7.989741 GGTGGATATTTAGCTAGCATGTATCAT 59.010 37.037 18.83 0.72 0.00 2.45
1057 1064 9.039870 GTGGATATTTAGCTAGCATGTATCATC 57.960 37.037 18.83 9.83 0.00 2.92
1058 1065 8.985922 TGGATATTTAGCTAGCATGTATCATCT 58.014 33.333 18.83 0.00 0.00 2.90
1059 1066 9.829507 GGATATTTAGCTAGCATGTATCATCTT 57.170 33.333 18.83 0.00 0.00 2.40
1062 1069 8.694975 ATTTAGCTAGCATGTATCATCTTACG 57.305 34.615 18.83 0.00 0.00 3.18
1063 1070 5.966742 AGCTAGCATGTATCATCTTACGA 57.033 39.130 18.83 0.00 0.00 3.43
1064 1071 5.948588 AGCTAGCATGTATCATCTTACGAG 58.051 41.667 18.83 0.00 0.00 4.18
1065 1072 5.707764 AGCTAGCATGTATCATCTTACGAGA 59.292 40.000 18.83 0.00 36.09 4.04
1066 1073 6.207614 AGCTAGCATGTATCATCTTACGAGAA 59.792 38.462 18.83 0.00 35.07 2.87
1067 1074 7.032580 GCTAGCATGTATCATCTTACGAGAAT 58.967 38.462 10.63 0.00 35.07 2.40
1068 1075 7.009083 GCTAGCATGTATCATCTTACGAGAATG 59.991 40.741 10.63 0.00 35.07 2.67
1069 1076 5.636965 AGCATGTATCATCTTACGAGAATGC 59.363 40.000 0.00 0.00 38.24 3.56
1070 1077 5.406477 GCATGTATCATCTTACGAGAATGCA 59.594 40.000 0.00 0.00 38.03 3.96
1071 1078 6.073602 GCATGTATCATCTTACGAGAATGCAA 60.074 38.462 0.00 0.00 38.03 4.08
1072 1079 7.360691 GCATGTATCATCTTACGAGAATGCAAT 60.361 37.037 0.00 0.00 38.03 3.56
1073 1080 9.143631 CATGTATCATCTTACGAGAATGCAATA 57.856 33.333 0.00 0.00 35.07 1.90
1074 1081 9.881649 ATGTATCATCTTACGAGAATGCAATAT 57.118 29.630 0.00 0.00 35.07 1.28
1075 1082 9.143631 TGTATCATCTTACGAGAATGCAATATG 57.856 33.333 0.00 0.00 35.07 1.78
1076 1083 7.606858 ATCATCTTACGAGAATGCAATATGG 57.393 36.000 0.00 0.00 35.07 2.74
1077 1084 6.524734 TCATCTTACGAGAATGCAATATGGT 58.475 36.000 0.00 0.00 35.07 3.55
1078 1085 7.666623 TCATCTTACGAGAATGCAATATGGTA 58.333 34.615 0.00 0.00 35.07 3.25
1079 1086 8.314021 TCATCTTACGAGAATGCAATATGGTAT 58.686 33.333 0.00 0.00 35.07 2.73
1080 1087 9.586435 CATCTTACGAGAATGCAATATGGTATA 57.414 33.333 0.00 0.00 35.07 1.47
1081 1088 9.809096 ATCTTACGAGAATGCAATATGGTATAG 57.191 33.333 0.00 0.00 35.07 1.31
1082 1089 9.020731 TCTTACGAGAATGCAATATGGTATAGA 57.979 33.333 0.00 0.00 0.00 1.98
1083 1090 9.809096 CTTACGAGAATGCAATATGGTATAGAT 57.191 33.333 0.00 0.00 0.00 1.98
1101 1108 9.810545 GGTATAGATAATCCAGAAGAAGTATGC 57.189 37.037 0.00 0.00 0.00 3.14
1109 1116 8.814038 AATCCAGAAGAAGTATGCATAAAAGT 57.186 30.769 8.28 0.00 0.00 2.66
1110 1117 7.849804 TCCAGAAGAAGTATGCATAAAAGTC 57.150 36.000 8.28 3.77 0.00 3.01
1111 1118 6.823689 TCCAGAAGAAGTATGCATAAAAGTCC 59.176 38.462 8.28 0.00 0.00 3.85
1112 1119 6.825721 CCAGAAGAAGTATGCATAAAAGTCCT 59.174 38.462 8.28 0.00 0.00 3.85
1113 1120 7.337942 CCAGAAGAAGTATGCATAAAAGTCCTT 59.662 37.037 8.28 6.35 0.00 3.36
1114 1121 8.180267 CAGAAGAAGTATGCATAAAAGTCCTTG 58.820 37.037 8.28 0.00 0.00 3.61
1115 1122 6.442513 AGAAGTATGCATAAAAGTCCTTGC 57.557 37.500 8.28 2.01 35.67 4.01
1116 1123 5.358160 AGAAGTATGCATAAAAGTCCTTGCC 59.642 40.000 8.28 0.00 34.20 4.52
1117 1124 3.954258 AGTATGCATAAAAGTCCTTGCCC 59.046 43.478 8.28 0.00 34.20 5.36
1118 1125 2.300956 TGCATAAAAGTCCTTGCCCA 57.699 45.000 0.00 0.00 34.20 5.36
1119 1126 2.603021 TGCATAAAAGTCCTTGCCCAA 58.397 42.857 0.00 0.00 34.20 4.12
1120 1127 2.968574 TGCATAAAAGTCCTTGCCCAAA 59.031 40.909 0.00 0.00 34.20 3.28
1121 1128 3.389329 TGCATAAAAGTCCTTGCCCAAAA 59.611 39.130 0.00 0.00 34.20 2.44
1122 1129 3.996363 GCATAAAAGTCCTTGCCCAAAAG 59.004 43.478 0.00 0.00 0.00 2.27
1123 1130 4.568956 CATAAAAGTCCTTGCCCAAAAGG 58.431 43.478 0.00 0.00 46.99 3.11
1152 1159 7.789202 TCCTAGAATTCCATCTATCTTCTGG 57.211 40.000 0.65 0.00 31.75 3.86
1153 1160 7.539292 TCCTAGAATTCCATCTATCTTCTGGA 58.461 38.462 0.65 0.00 37.29 3.86
1154 1161 8.182885 TCCTAGAATTCCATCTATCTTCTGGAT 58.817 37.037 0.65 0.00 38.79 3.41
1155 1162 8.824783 CCTAGAATTCCATCTATCTTCTGGATT 58.175 37.037 0.65 0.00 38.79 3.01
1157 1164 8.921353 AGAATTCCATCTATCTTCTGGATTTG 57.079 34.615 0.65 0.00 38.79 2.32
1158 1165 7.943447 AGAATTCCATCTATCTTCTGGATTTGG 59.057 37.037 0.65 0.00 38.79 3.28
1159 1166 6.829985 TTCCATCTATCTTCTGGATTTGGA 57.170 37.500 0.00 0.00 38.79 3.53
1160 1167 6.430962 TCCATCTATCTTCTGGATTTGGAG 57.569 41.667 0.00 0.00 34.65 3.86
1161 1168 6.146047 TCCATCTATCTTCTGGATTTGGAGA 58.854 40.000 0.00 0.00 34.65 3.71
1162 1169 6.616959 TCCATCTATCTTCTGGATTTGGAGAA 59.383 38.462 0.00 0.00 34.65 2.87
1163 1170 6.935771 CCATCTATCTTCTGGATTTGGAGAAG 59.064 42.308 0.00 0.00 44.48 2.85
1164 1171 7.419981 CCATCTATCTTCTGGATTTGGAGAAGT 60.420 40.741 0.00 0.00 43.83 3.01
1165 1172 6.882656 TCTATCTTCTGGATTTGGAGAAGTG 58.117 40.000 0.00 0.00 43.83 3.16
1166 1173 3.679389 TCTTCTGGATTTGGAGAAGTGC 58.321 45.455 0.00 0.00 43.83 4.40
1167 1174 2.496899 TCTGGATTTGGAGAAGTGCC 57.503 50.000 0.00 0.00 0.00 5.01
1168 1175 1.089920 CTGGATTTGGAGAAGTGCCG 58.910 55.000 0.00 0.00 0.00 5.69
1169 1176 0.690192 TGGATTTGGAGAAGTGCCGA 59.310 50.000 0.00 0.00 0.00 5.54
1170 1177 1.281867 TGGATTTGGAGAAGTGCCGAT 59.718 47.619 0.00 0.00 0.00 4.18
1171 1178 2.290896 TGGATTTGGAGAAGTGCCGATT 60.291 45.455 0.00 0.00 0.00 3.34
1172 1179 2.755103 GGATTTGGAGAAGTGCCGATTT 59.245 45.455 0.00 0.00 0.00 2.17
1173 1180 3.193479 GGATTTGGAGAAGTGCCGATTTT 59.807 43.478 0.00 0.00 0.00 1.82
1174 1181 3.915437 TTTGGAGAAGTGCCGATTTTC 57.085 42.857 0.00 0.00 0.00 2.29
1175 1182 2.559698 TGGAGAAGTGCCGATTTTCA 57.440 45.000 0.00 0.00 0.00 2.69
1176 1183 2.857483 TGGAGAAGTGCCGATTTTCAA 58.143 42.857 0.00 0.00 0.00 2.69
1177 1184 2.813754 TGGAGAAGTGCCGATTTTCAAG 59.186 45.455 0.00 0.00 0.00 3.02
1178 1185 3.074412 GGAGAAGTGCCGATTTTCAAGA 58.926 45.455 0.00 0.00 0.00 3.02
1179 1186 3.502211 GGAGAAGTGCCGATTTTCAAGAA 59.498 43.478 0.00 0.00 0.00 2.52
1180 1187 4.467735 GAGAAGTGCCGATTTTCAAGAAC 58.532 43.478 0.00 0.00 0.00 3.01
1181 1188 3.882888 AGAAGTGCCGATTTTCAAGAACA 59.117 39.130 0.00 0.00 0.00 3.18
1182 1189 3.626028 AGTGCCGATTTTCAAGAACAC 57.374 42.857 0.00 0.00 0.00 3.32
1183 1190 2.032030 AGTGCCGATTTTCAAGAACACG 60.032 45.455 0.00 0.00 32.22 4.49
1184 1191 2.032377 GTGCCGATTTTCAAGAACACGA 60.032 45.455 0.00 0.00 0.00 4.35
1185 1192 2.614520 TGCCGATTTTCAAGAACACGAA 59.385 40.909 0.00 0.00 0.00 3.85
1186 1193 3.252215 TGCCGATTTTCAAGAACACGAAT 59.748 39.130 0.00 0.00 0.00 3.34
1187 1194 3.846335 GCCGATTTTCAAGAACACGAATC 59.154 43.478 0.00 0.00 0.00 2.52
1188 1195 4.378459 GCCGATTTTCAAGAACACGAATCT 60.378 41.667 0.00 0.00 0.00 2.40
1189 1196 5.689819 CCGATTTTCAAGAACACGAATCTT 58.310 37.500 0.00 0.00 37.62 2.40
1190 1197 6.619874 GCCGATTTTCAAGAACACGAATCTTA 60.620 38.462 0.00 0.00 35.43 2.10
1191 1198 7.464358 CCGATTTTCAAGAACACGAATCTTAT 58.536 34.615 0.00 0.00 35.43 1.73
1192 1199 7.426456 CCGATTTTCAAGAACACGAATCTTATG 59.574 37.037 0.00 0.00 35.43 1.90
1193 1200 8.168626 CGATTTTCAAGAACACGAATCTTATGA 58.831 33.333 0.00 0.00 35.43 2.15
1194 1201 9.994432 GATTTTCAAGAACACGAATCTTATGAT 57.006 29.630 0.00 0.00 35.43 2.45
1198 1205 8.593492 TCAAGAACACGAATCTTATGATATGG 57.407 34.615 0.00 0.00 35.43 2.74
1199 1206 8.204160 TCAAGAACACGAATCTTATGATATGGT 58.796 33.333 0.00 0.00 35.43 3.55
1200 1207 7.953158 AGAACACGAATCTTATGATATGGTG 57.047 36.000 0.00 11.67 32.15 4.17
1201 1208 6.931281 AGAACACGAATCTTATGATATGGTGG 59.069 38.462 15.08 0.00 31.24 4.61
1202 1209 5.551233 ACACGAATCTTATGATATGGTGGG 58.449 41.667 15.08 1.56 31.24 4.61
1203 1210 5.306937 ACACGAATCTTATGATATGGTGGGA 59.693 40.000 15.08 0.00 31.24 4.37
1204 1211 6.183361 ACACGAATCTTATGATATGGTGGGAA 60.183 38.462 15.08 0.00 31.24 3.97
1205 1212 6.881065 CACGAATCTTATGATATGGTGGGAAT 59.119 38.462 0.00 0.00 31.70 3.01
1206 1213 7.391554 CACGAATCTTATGATATGGTGGGAATT 59.608 37.037 0.00 0.00 31.70 2.17
1207 1214 7.944554 ACGAATCTTATGATATGGTGGGAATTT 59.055 33.333 0.00 0.00 31.70 1.82
1208 1215 8.454106 CGAATCTTATGATATGGTGGGAATTTC 58.546 37.037 0.00 0.00 31.70 2.17
1209 1216 9.525826 GAATCTTATGATATGGTGGGAATTTCT 57.474 33.333 0.00 0.00 31.70 2.52
1210 1217 9.887862 AATCTTATGATATGGTGGGAATTTCTT 57.112 29.630 0.00 0.00 31.70 2.52
1227 1234 9.774742 GGAATTTCTTATGATAATTATCCACGC 57.225 33.333 20.29 0.00 31.71 5.34
1228 1235 9.774742 GAATTTCTTATGATAATTATCCACGCC 57.225 33.333 20.29 0.00 31.71 5.68
1229 1236 9.520515 AATTTCTTATGATAATTATCCACGCCT 57.479 29.630 20.29 3.85 31.71 5.52
1230 1237 8.918202 TTTCTTATGATAATTATCCACGCCTT 57.082 30.769 20.29 0.00 31.71 4.35
1235 1242 9.562408 TTATGATAATTATCCACGCCTTAAACA 57.438 29.630 20.29 0.90 31.71 2.83
1236 1243 8.635765 ATGATAATTATCCACGCCTTAAACAT 57.364 30.769 20.29 3.04 31.71 2.71
1237 1244 9.733556 ATGATAATTATCCACGCCTTAAACATA 57.266 29.630 20.29 0.00 31.71 2.29
1238 1245 9.733556 TGATAATTATCCACGCCTTAAACATAT 57.266 29.630 20.29 0.00 31.71 1.78
1240 1247 9.733556 ATAATTATCCACGCCTTAAACATATCA 57.266 29.630 0.00 0.00 0.00 2.15
1241 1248 8.635765 AATTATCCACGCCTTAAACATATCAT 57.364 30.769 0.00 0.00 0.00 2.45
1242 1249 9.733556 AATTATCCACGCCTTAAACATATCATA 57.266 29.630 0.00 0.00 0.00 2.15
1243 1250 9.733556 ATTATCCACGCCTTAAACATATCATAA 57.266 29.630 0.00 0.00 0.00 1.90
1244 1251 9.733556 TTATCCACGCCTTAAACATATCATAAT 57.266 29.630 0.00 0.00 0.00 1.28
1245 1252 7.433708 TCCACGCCTTAAACATATCATAATG 57.566 36.000 0.00 0.00 0.00 1.90
1246 1253 6.072728 TCCACGCCTTAAACATATCATAATGC 60.073 38.462 0.00 0.00 0.00 3.56
1247 1254 6.086222 CACGCCTTAAACATATCATAATGCC 58.914 40.000 0.00 0.00 0.00 4.40
1248 1255 6.003950 ACGCCTTAAACATATCATAATGCCT 58.996 36.000 0.00 0.00 0.00 4.75
1249 1256 6.072508 ACGCCTTAAACATATCATAATGCCTG 60.073 38.462 0.00 0.00 0.00 4.85
1250 1257 6.149308 CGCCTTAAACATATCATAATGCCTGA 59.851 38.462 0.00 0.00 0.00 3.86
1251 1258 7.308529 CGCCTTAAACATATCATAATGCCTGAA 60.309 37.037 0.00 0.00 0.00 3.02
1252 1259 8.359642 GCCTTAAACATATCATAATGCCTGAAA 58.640 33.333 0.00 0.00 0.00 2.69
1253 1260 9.903682 CCTTAAACATATCATAATGCCTGAAAG 57.096 33.333 0.00 0.00 0.00 2.62
1257 1264 7.281040 ACATATCATAATGCCTGAAAGTTGG 57.719 36.000 0.00 0.00 0.00 3.77
1258 1265 7.062322 ACATATCATAATGCCTGAAAGTTGGA 58.938 34.615 0.00 0.00 0.00 3.53
1259 1266 7.727186 ACATATCATAATGCCTGAAAGTTGGAT 59.273 33.333 0.00 0.00 0.00 3.41
1260 1267 9.234827 CATATCATAATGCCTGAAAGTTGGATA 57.765 33.333 0.00 0.00 0.00 2.59
1261 1268 7.756395 ATCATAATGCCTGAAAGTTGGATAG 57.244 36.000 0.00 0.00 0.00 2.08
1262 1269 6.064060 TCATAATGCCTGAAAGTTGGATAGG 58.936 40.000 0.00 0.00 0.00 2.57
1267 1274 2.424956 CCTGAAAGTTGGATAGGCTTGC 59.575 50.000 0.00 0.00 0.00 4.01
1268 1275 2.424956 CTGAAAGTTGGATAGGCTTGCC 59.575 50.000 2.97 2.97 0.00 4.52
1269 1276 1.751351 GAAAGTTGGATAGGCTTGCCC 59.249 52.381 8.17 0.00 0.00 5.36
1271 1278 1.002857 AGTTGGATAGGCTTGCCCTT 58.997 50.000 8.17 0.00 43.06 3.95
1272 1279 2.205342 AGTTGGATAGGCTTGCCCTTA 58.795 47.619 8.17 0.00 43.06 2.69
1273 1280 2.092375 AGTTGGATAGGCTTGCCCTTAC 60.092 50.000 8.17 0.00 43.06 2.34
1274 1281 0.468226 TGGATAGGCTTGCCCTTACG 59.532 55.000 8.17 0.00 43.06 3.18
1275 1282 0.468648 GGATAGGCTTGCCCTTACGT 59.531 55.000 8.17 0.00 43.06 3.57
1276 1283 1.690352 GGATAGGCTTGCCCTTACGTA 59.310 52.381 8.17 0.00 43.06 3.57
1277 1284 2.103601 GGATAGGCTTGCCCTTACGTAA 59.896 50.000 7.94 7.94 43.06 3.18
1278 1285 2.973694 TAGGCTTGCCCTTACGTAAG 57.026 50.000 25.33 25.33 43.06 2.34
1294 1301 8.137745 CTTACGTAAGGATTATATAACCCCCA 57.862 38.462 24.73 0.00 46.39 4.96
1295 1302 8.503428 TTACGTAAGGATTATATAACCCCCAA 57.497 34.615 3.29 0.00 46.39 4.12
1296 1303 7.578458 ACGTAAGGATTATATAACCCCCAAT 57.422 36.000 1.84 0.00 46.39 3.16
1297 1304 7.992295 ACGTAAGGATTATATAACCCCCAATT 58.008 34.615 1.84 0.00 46.39 2.32
1298 1305 8.450434 ACGTAAGGATTATATAACCCCCAATTT 58.550 33.333 1.84 0.00 46.39 1.82
1299 1306 9.304335 CGTAAGGATTATATAACCCCCAATTTT 57.696 33.333 1.84 0.00 30.46 1.82
1332 1339 9.788889 ATACAAGATGCTCATTGAATGATAAGA 57.211 29.630 8.50 0.00 38.85 2.10
1333 1340 8.515695 ACAAGATGCTCATTGAATGATAAGAA 57.484 30.769 8.50 0.00 38.85 2.52
1334 1341 8.963725 ACAAGATGCTCATTGAATGATAAGAAA 58.036 29.630 8.50 0.00 38.85 2.52
1335 1342 9.967346 CAAGATGCTCATTGAATGATAAGAAAT 57.033 29.630 8.50 0.00 38.85 2.17
1338 1345 9.961265 GATGCTCATTGAATGATAAGAAATTCA 57.039 29.630 8.50 0.00 40.21 2.57
1340 1347 9.744468 TGCTCATTGAATGATAAGAAATTCATG 57.256 29.630 8.50 0.00 41.23 3.07
1341 1348 8.700644 GCTCATTGAATGATAAGAAATTCATGC 58.299 33.333 8.50 0.22 41.23 4.06
1342 1349 9.967346 CTCATTGAATGATAAGAAATTCATGCT 57.033 29.630 8.50 0.00 41.23 3.79
1343 1350 9.961265 TCATTGAATGATAAGAAATTCATGCTC 57.039 29.630 3.29 0.00 41.23 4.26
1344 1351 9.744468 CATTGAATGATAAGAAATTCATGCTCA 57.256 29.630 0.00 0.00 41.23 4.26
1345 1352 9.745880 ATTGAATGATAAGAAATTCATGCTCAC 57.254 29.630 0.00 0.00 41.23 3.51
1346 1353 8.515695 TGAATGATAAGAAATTCATGCTCACT 57.484 30.769 0.00 0.00 37.76 3.41
1347 1354 8.963725 TGAATGATAAGAAATTCATGCTCACTT 58.036 29.630 0.00 0.00 37.76 3.16
1356 1363 9.846248 AGAAATTCATGCTCACTTATAAAACAC 57.154 29.630 0.00 0.00 0.00 3.32
1357 1364 9.624697 GAAATTCATGCTCACTTATAAAACACA 57.375 29.630 0.00 0.00 0.00 3.72
1358 1365 9.979578 AAATTCATGCTCACTTATAAAACACAA 57.020 25.926 0.00 0.00 0.00 3.33
1359 1366 8.970691 ATTCATGCTCACTTATAAAACACAAC 57.029 30.769 0.00 0.00 0.00 3.32
1360 1367 7.744087 TCATGCTCACTTATAAAACACAACT 57.256 32.000 0.00 0.00 0.00 3.16
1361 1368 7.806690 TCATGCTCACTTATAAAACACAACTC 58.193 34.615 0.00 0.00 0.00 3.01
1362 1369 6.554334 TGCTCACTTATAAAACACAACTCC 57.446 37.500 0.00 0.00 0.00 3.85
1363 1370 6.058833 TGCTCACTTATAAAACACAACTCCA 58.941 36.000 0.00 0.00 0.00 3.86
1364 1371 6.204688 TGCTCACTTATAAAACACAACTCCAG 59.795 38.462 0.00 0.00 0.00 3.86
1365 1372 6.426937 GCTCACTTATAAAACACAACTCCAGA 59.573 38.462 0.00 0.00 0.00 3.86
1366 1373 7.119846 GCTCACTTATAAAACACAACTCCAGAT 59.880 37.037 0.00 0.00 0.00 2.90
1367 1374 8.918202 TCACTTATAAAACACAACTCCAGATT 57.082 30.769 0.00 0.00 0.00 2.40
1368 1375 9.349713 TCACTTATAAAACACAACTCCAGATTT 57.650 29.630 0.00 0.00 0.00 2.17
1369 1376 9.965824 CACTTATAAAACACAACTCCAGATTTT 57.034 29.630 0.00 0.00 0.00 1.82
1376 1383 9.533253 AAAACACAACTCCAGATTTTATTCAAG 57.467 29.630 0.00 0.00 0.00 3.02
1377 1384 7.823745 ACACAACTCCAGATTTTATTCAAGT 57.176 32.000 0.00 0.00 0.00 3.16
1378 1385 7.875971 ACACAACTCCAGATTTTATTCAAGTC 58.124 34.615 0.00 0.00 0.00 3.01
1379 1386 7.502226 ACACAACTCCAGATTTTATTCAAGTCA 59.498 33.333 0.00 0.00 0.00 3.41
1380 1387 8.352201 CACAACTCCAGATTTTATTCAAGTCAA 58.648 33.333 0.00 0.00 0.00 3.18
1381 1388 8.571336 ACAACTCCAGATTTTATTCAAGTCAAG 58.429 33.333 0.00 0.00 0.00 3.02
1382 1389 7.693969 ACTCCAGATTTTATTCAAGTCAAGG 57.306 36.000 0.00 0.00 0.00 3.61
1383 1390 7.461749 ACTCCAGATTTTATTCAAGTCAAGGA 58.538 34.615 0.00 0.00 0.00 3.36
1384 1391 7.944554 ACTCCAGATTTTATTCAAGTCAAGGAA 59.055 33.333 0.00 0.00 0.00 3.36
1385 1392 8.884124 TCCAGATTTTATTCAAGTCAAGGAAT 57.116 30.769 0.00 0.00 37.49 3.01
1386 1393 9.973661 TCCAGATTTTATTCAAGTCAAGGAATA 57.026 29.630 0.00 0.00 35.49 1.75
1398 1405 9.807921 TCAAGTCAAGGAATATTTTTAGGTTCT 57.192 29.630 0.00 0.00 0.00 3.01
1529 1540 3.444742 ACCGATCAAGTACCGAACATACA 59.555 43.478 0.00 0.00 0.00 2.29
1550 1561 2.434884 CCTCCGCGTTCTGCACAT 60.435 61.111 4.92 0.00 46.97 3.21
1560 1571 1.875514 GTTCTGCACATGTTCAGCTCA 59.124 47.619 19.23 4.50 0.00 4.26
1568 1579 2.138320 CATGTTCAGCTCAGTGACGTT 58.862 47.619 0.00 0.00 0.00 3.99
1698 1709 3.033184 ACTACGAAAATATGACCGGGGA 58.967 45.455 6.32 0.00 0.00 4.81
1789 1817 1.679969 ATAGGTGGGGGAGAGGGAGG 61.680 65.000 0.00 0.00 0.00 4.30
1870 1903 2.355716 CCCTTCCTTATTTGGAGTGCGA 60.356 50.000 0.00 0.00 37.43 5.10
1878 1911 1.338107 TTTGGAGTGCGAGAGGAAGA 58.662 50.000 0.00 0.00 0.00 2.87
1888 1921 2.729194 CGAGAGGAAGAAAGGAGGAGA 58.271 52.381 0.00 0.00 0.00 3.71
2002 2041 2.425592 CGCACCAGTCCCTTGTGA 59.574 61.111 0.12 0.00 30.01 3.58
2009 2048 0.976641 CAGTCCCTTGTGAGCTGGTA 59.023 55.000 0.00 0.00 0.00 3.25
2068 2108 4.295199 GGTGCCCGGAACCCCTTT 62.295 66.667 13.80 0.00 0.00 3.11
2138 2178 8.212995 TGTCCGAATACCATCGTCCTATATATA 58.787 37.037 0.00 0.00 41.16 0.86
2200 2240 1.063642 TGTGATCTCATCCGGGACTCT 60.064 52.381 0.00 0.00 0.00 3.24
2201 2241 2.174854 TGTGATCTCATCCGGGACTCTA 59.825 50.000 0.00 0.00 0.00 2.43
2207 2247 4.999310 TCTCATCCGGGACTCTATACAAT 58.001 43.478 0.00 0.00 0.00 2.71
2218 2258 5.279306 GGACTCTATACAATATTCGGGCACA 60.279 44.000 0.00 0.00 0.00 4.57
2258 2298 9.769093 CATATAACACTATATCGTCGATGAACA 57.231 33.333 17.98 3.01 29.67 3.18
2261 2301 7.624706 AACACTATATCGTCGATGAACATTC 57.375 36.000 17.98 0.00 0.00 2.67
2278 2318 2.877097 TTCAAGCATGCAGACCCTAA 57.123 45.000 21.98 1.08 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 7.753630 AGCATTATAAGATGATCCCTTCACTT 58.246 34.615 1.31 0.00 37.11 3.16
99 100 4.585879 TGATGATGGCCATATCATGTCAG 58.414 43.478 23.53 0.00 45.30 3.51
151 152 6.879276 GTGATGATGGAGATCATGACAATT 57.121 37.500 0.00 0.00 46.70 2.32
211 212 3.755378 AGAAGCAATAGTTGGCAAGACAG 59.245 43.478 0.00 0.00 0.00 3.51
275 276 1.132834 TGTATGAAATGCAAGCGCCAG 59.867 47.619 2.29 0.00 35.47 4.85
322 323 5.707242 TTTGTAATATTGACAACCGGCAA 57.293 34.783 0.00 0.00 36.55 4.52
411 413 4.578928 AGGACGTCTAACTTGTTTTTGCAT 59.421 37.500 16.46 0.00 0.00 3.96
442 444 5.160641 CAGCCACGTAAAACTTGCAATAAT 58.839 37.500 0.00 0.00 0.00 1.28
445 447 2.862140 GCAGCCACGTAAAACTTGCAAT 60.862 45.455 0.00 0.00 0.00 3.56
521 526 7.035612 AGAAGGTTAAAACAGCAAACTTTCTG 58.964 34.615 9.96 0.00 43.60 3.02
523 528 7.544217 TGAAGAAGGTTAAAACAGCAAACTTTC 59.456 33.333 0.00 0.00 38.67 2.62
524 529 7.382898 TGAAGAAGGTTAAAACAGCAAACTTT 58.617 30.769 0.00 0.00 31.91 2.66
594 599 2.048127 GTGGCTGACGGGTGTCTC 60.048 66.667 0.00 0.00 45.70 3.36
663 668 2.355716 CGGACCAACCTTACATGTCCAT 60.356 50.000 0.00 0.00 44.55 3.41
686 691 3.866703 TGTATTGTGGGTTGAAGTGGA 57.133 42.857 0.00 0.00 0.00 4.02
689 694 3.008594 TCGGATGTATTGTGGGTTGAAGT 59.991 43.478 0.00 0.00 0.00 3.01
695 700 3.924114 TGATTCGGATGTATTGTGGGT 57.076 42.857 0.00 0.00 0.00 4.51
706 711 5.646360 ACCAACGTCTTATTTTGATTCGGAT 59.354 36.000 0.00 0.00 0.00 4.18
707 712 4.998672 ACCAACGTCTTATTTTGATTCGGA 59.001 37.500 0.00 0.00 0.00 4.55
793 799 1.043816 CATCCGAGCCAGGTCTATGT 58.956 55.000 0.00 0.00 0.00 2.29
847 854 7.458409 AGATCTTGCATGTGTGTAGATTTTT 57.542 32.000 0.00 0.00 32.61 1.94
880 887 0.179100 ACCGCTGACATCTTCCATCG 60.179 55.000 0.00 0.00 0.00 3.84
885 892 2.417719 ACTTGAACCGCTGACATCTTC 58.582 47.619 0.00 0.00 0.00 2.87
886 893 2.550830 ACTTGAACCGCTGACATCTT 57.449 45.000 0.00 0.00 0.00 2.40
887 894 2.417719 GAACTTGAACCGCTGACATCT 58.582 47.619 0.00 0.00 0.00 2.90
888 895 1.126846 CGAACTTGAACCGCTGACATC 59.873 52.381 0.00 0.00 0.00 3.06
889 896 1.148310 CGAACTTGAACCGCTGACAT 58.852 50.000 0.00 0.00 0.00 3.06
890 897 1.495584 GCGAACTTGAACCGCTGACA 61.496 55.000 0.00 0.00 44.83 3.58
891 898 1.204312 GCGAACTTGAACCGCTGAC 59.796 57.895 0.00 0.00 44.83 3.51
892 899 3.637714 GCGAACTTGAACCGCTGA 58.362 55.556 0.00 0.00 44.83 4.26
896 903 3.512680 AGAGATAAGCGAACTTGAACCG 58.487 45.455 0.00 0.00 36.57 4.44
897 904 4.504826 GCTAGAGATAAGCGAACTTGAACC 59.495 45.833 0.00 0.00 36.57 3.62
898 905 4.504826 GGCTAGAGATAAGCGAACTTGAAC 59.495 45.833 0.00 0.00 41.03 3.18
899 906 4.441634 GGGCTAGAGATAAGCGAACTTGAA 60.442 45.833 0.00 0.00 41.03 2.69
900 907 3.068307 GGGCTAGAGATAAGCGAACTTGA 59.932 47.826 0.00 0.00 41.03 3.02
901 908 3.385577 GGGCTAGAGATAAGCGAACTTG 58.614 50.000 0.00 0.00 41.03 3.16
902 909 2.034812 CGGGCTAGAGATAAGCGAACTT 59.965 50.000 0.00 0.00 41.03 2.66
903 910 1.609555 CGGGCTAGAGATAAGCGAACT 59.390 52.381 0.00 0.00 41.03 3.01
904 911 1.337387 ACGGGCTAGAGATAAGCGAAC 59.663 52.381 0.00 0.00 41.03 3.95
905 912 1.337071 CACGGGCTAGAGATAAGCGAA 59.663 52.381 0.00 0.00 41.03 4.70
906 913 0.952280 CACGGGCTAGAGATAAGCGA 59.048 55.000 0.00 0.00 41.03 4.93
907 914 0.952280 TCACGGGCTAGAGATAAGCG 59.048 55.000 0.00 0.00 41.03 4.68
908 915 2.362717 AGTTCACGGGCTAGAGATAAGC 59.637 50.000 0.00 0.00 39.33 3.09
909 916 4.657436 AAGTTCACGGGCTAGAGATAAG 57.343 45.455 0.00 0.00 0.00 1.73
910 917 4.037684 GCTAAGTTCACGGGCTAGAGATAA 59.962 45.833 0.00 0.00 0.00 1.75
911 918 3.568853 GCTAAGTTCACGGGCTAGAGATA 59.431 47.826 0.00 0.00 0.00 1.98
912 919 2.362717 GCTAAGTTCACGGGCTAGAGAT 59.637 50.000 0.00 0.00 0.00 2.75
913 920 1.749634 GCTAAGTTCACGGGCTAGAGA 59.250 52.381 0.00 0.00 0.00 3.10
914 921 1.534175 CGCTAAGTTCACGGGCTAGAG 60.534 57.143 0.00 0.00 0.00 2.43
915 922 0.454600 CGCTAAGTTCACGGGCTAGA 59.545 55.000 0.00 0.00 0.00 2.43
916 923 0.527817 CCGCTAAGTTCACGGGCTAG 60.528 60.000 8.29 0.00 43.23 3.42
917 924 0.966875 TCCGCTAAGTTCACGGGCTA 60.967 55.000 14.52 0.00 46.87 3.93
918 925 1.614241 ATCCGCTAAGTTCACGGGCT 61.614 55.000 14.52 2.77 46.87 5.19
919 926 0.103572 TATCCGCTAAGTTCACGGGC 59.896 55.000 14.52 0.00 46.87 6.13
920 927 1.407979 AGTATCCGCTAAGTTCACGGG 59.592 52.381 14.52 0.00 46.87 5.28
922 929 7.428761 GCTATAATAGTATCCGCTAAGTTCACG 59.571 40.741 0.00 0.00 0.00 4.35
923 930 7.428761 CGCTATAATAGTATCCGCTAAGTTCAC 59.571 40.741 0.00 0.00 0.00 3.18
924 931 7.335171 TCGCTATAATAGTATCCGCTAAGTTCA 59.665 37.037 0.00 0.00 0.00 3.18
925 932 7.692088 TCGCTATAATAGTATCCGCTAAGTTC 58.308 38.462 0.00 0.00 0.00 3.01
926 933 7.621428 TCGCTATAATAGTATCCGCTAAGTT 57.379 36.000 0.00 0.00 0.00 2.66
927 934 7.804843 ATCGCTATAATAGTATCCGCTAAGT 57.195 36.000 0.00 0.00 0.00 2.24
928 935 7.958567 GCTATCGCTATAATAGTATCCGCTAAG 59.041 40.741 0.00 0.00 0.00 2.18
929 936 7.443272 TGCTATCGCTATAATAGTATCCGCTAA 59.557 37.037 0.00 0.00 36.97 3.09
930 937 6.932960 TGCTATCGCTATAATAGTATCCGCTA 59.067 38.462 0.00 0.00 36.97 4.26
931 938 5.763698 TGCTATCGCTATAATAGTATCCGCT 59.236 40.000 0.00 0.00 36.97 5.52
932 939 5.852229 GTGCTATCGCTATAATAGTATCCGC 59.148 44.000 0.00 0.00 36.97 5.54
933 940 6.372185 GGTGCTATCGCTATAATAGTATCCG 58.628 44.000 0.00 0.00 36.97 4.18
934 941 6.204301 TCGGTGCTATCGCTATAATAGTATCC 59.796 42.308 0.00 0.00 36.97 2.59
935 942 7.187244 TCGGTGCTATCGCTATAATAGTATC 57.813 40.000 0.00 0.00 36.97 2.24
936 943 7.563888 TTCGGTGCTATCGCTATAATAGTAT 57.436 36.000 0.00 0.00 36.97 2.12
937 944 6.990341 TTCGGTGCTATCGCTATAATAGTA 57.010 37.500 0.00 0.00 36.97 1.82
938 945 5.892160 TTCGGTGCTATCGCTATAATAGT 57.108 39.130 0.00 0.00 36.97 2.12
939 946 7.757097 AAATTCGGTGCTATCGCTATAATAG 57.243 36.000 0.00 0.00 36.97 1.73
940 947 7.412563 GCAAAATTCGGTGCTATCGCTATAATA 60.413 37.037 2.38 0.00 37.78 0.98
941 948 6.620733 GCAAAATTCGGTGCTATCGCTATAAT 60.621 38.462 2.38 0.00 37.78 1.28
942 949 5.333798 GCAAAATTCGGTGCTATCGCTATAA 60.334 40.000 2.38 0.00 37.78 0.98
943 950 4.151689 GCAAAATTCGGTGCTATCGCTATA 59.848 41.667 2.38 0.00 37.78 1.31
944 951 3.058914 GCAAAATTCGGTGCTATCGCTAT 60.059 43.478 2.38 0.00 37.78 2.97
945 952 2.286833 GCAAAATTCGGTGCTATCGCTA 59.713 45.455 2.38 0.00 37.78 4.26
946 953 1.064060 GCAAAATTCGGTGCTATCGCT 59.936 47.619 2.38 0.00 37.78 4.93
947 954 1.466855 GCAAAATTCGGTGCTATCGC 58.533 50.000 2.38 0.00 37.78 4.58
948 955 1.400142 TGGCAAAATTCGGTGCTATCG 59.600 47.619 8.19 0.00 40.70 2.92
949 956 3.502191 TTGGCAAAATTCGGTGCTATC 57.498 42.857 0.00 0.00 40.70 2.08
950 957 4.432712 GAATTGGCAAAATTCGGTGCTAT 58.567 39.130 3.01 1.88 40.70 2.97
951 958 3.843999 GAATTGGCAAAATTCGGTGCTA 58.156 40.909 3.01 0.89 40.70 3.49
952 959 2.687370 GAATTGGCAAAATTCGGTGCT 58.313 42.857 3.01 0.00 40.70 4.40
958 965 5.923684 TCAAACTACCGAATTGGCAAAATTC 59.076 36.000 3.01 3.58 43.94 2.17
959 966 5.848406 TCAAACTACCGAATTGGCAAAATT 58.152 33.333 3.01 0.00 43.94 1.82
960 967 5.461032 TCAAACTACCGAATTGGCAAAAT 57.539 34.783 3.01 0.00 43.94 1.82
961 968 4.920640 TCAAACTACCGAATTGGCAAAA 57.079 36.364 3.01 0.00 43.94 2.44
962 969 4.764823 AGATCAAACTACCGAATTGGCAAA 59.235 37.500 3.01 0.00 43.94 3.68
963 970 4.331968 AGATCAAACTACCGAATTGGCAA 58.668 39.130 0.68 0.68 43.94 4.52
964 971 3.950397 AGATCAAACTACCGAATTGGCA 58.050 40.909 0.00 0.00 43.94 4.92
965 972 5.758296 TCATAGATCAAACTACCGAATTGGC 59.242 40.000 0.00 0.00 43.94 4.52
966 973 7.969536 ATCATAGATCAAACTACCGAATTGG 57.030 36.000 0.00 0.00 46.41 3.16
967 974 9.869844 GAAATCATAGATCAAACTACCGAATTG 57.130 33.333 0.00 0.00 0.00 2.32
968 975 9.613428 TGAAATCATAGATCAAACTACCGAATT 57.387 29.630 0.00 0.00 0.00 2.17
969 976 9.046296 GTGAAATCATAGATCAAACTACCGAAT 57.954 33.333 0.00 0.00 0.00 3.34
970 977 8.038351 TGTGAAATCATAGATCAAACTACCGAA 58.962 33.333 0.00 0.00 0.00 4.30
971 978 7.552459 TGTGAAATCATAGATCAAACTACCGA 58.448 34.615 0.00 0.00 0.00 4.69
972 979 7.770801 TGTGAAATCATAGATCAAACTACCG 57.229 36.000 0.00 0.00 0.00 4.02
977 984 9.459640 CCATGAATGTGAAATCATAGATCAAAC 57.540 33.333 0.00 0.00 34.61 2.93
978 985 9.411189 TCCATGAATGTGAAATCATAGATCAAA 57.589 29.630 0.00 0.00 34.61 2.69
979 986 8.983702 TCCATGAATGTGAAATCATAGATCAA 57.016 30.769 0.00 0.00 34.61 2.57
980 987 9.010029 CATCCATGAATGTGAAATCATAGATCA 57.990 33.333 0.00 2.51 33.87 2.92
981 988 9.011095 ACATCCATGAATGTGAAATCATAGATC 57.989 33.333 0.00 0.00 38.43 2.75
982 989 8.935614 ACATCCATGAATGTGAAATCATAGAT 57.064 30.769 0.00 0.00 38.43 1.98
983 990 8.626526 CAACATCCATGAATGTGAAATCATAGA 58.373 33.333 0.00 0.00 39.76 1.98
984 991 7.865889 CCAACATCCATGAATGTGAAATCATAG 59.134 37.037 0.00 0.00 39.76 2.23
985 992 7.560626 TCCAACATCCATGAATGTGAAATCATA 59.439 33.333 0.00 0.00 39.76 2.15
986 993 6.381707 TCCAACATCCATGAATGTGAAATCAT 59.618 34.615 0.00 0.00 39.76 2.45
987 994 5.715753 TCCAACATCCATGAATGTGAAATCA 59.284 36.000 0.00 0.00 39.76 2.57
988 995 6.211587 TCCAACATCCATGAATGTGAAATC 57.788 37.500 0.00 0.00 39.76 2.17
989 996 6.610020 AGATCCAACATCCATGAATGTGAAAT 59.390 34.615 0.00 0.00 39.76 2.17
990 997 5.953548 AGATCCAACATCCATGAATGTGAAA 59.046 36.000 0.00 0.00 39.76 2.69
991 998 5.512298 AGATCCAACATCCATGAATGTGAA 58.488 37.500 0.00 0.00 39.76 3.18
992 999 5.120054 AGATCCAACATCCATGAATGTGA 57.880 39.130 0.00 0.00 39.76 3.58
993 1000 5.847111 AAGATCCAACATCCATGAATGTG 57.153 39.130 0.00 0.00 39.76 3.21
994 1001 7.292319 TCATAAGATCCAACATCCATGAATGT 58.708 34.615 0.00 0.00 41.60 2.71
995 1002 7.754851 TCATAAGATCCAACATCCATGAATG 57.245 36.000 0.00 0.00 0.00 2.67
996 1003 7.948447 ACATCATAAGATCCAACATCCATGAAT 59.052 33.333 0.00 0.00 30.20 2.57
997 1004 7.292319 ACATCATAAGATCCAACATCCATGAA 58.708 34.615 0.00 0.00 30.20 2.57
998 1005 6.844829 ACATCATAAGATCCAACATCCATGA 58.155 36.000 0.00 0.00 30.20 3.07
999 1006 7.148289 GCTACATCATAAGATCCAACATCCATG 60.148 40.741 0.00 0.00 30.20 3.66
1000 1007 6.883217 GCTACATCATAAGATCCAACATCCAT 59.117 38.462 0.00 0.00 30.20 3.41
1001 1008 6.183361 TGCTACATCATAAGATCCAACATCCA 60.183 38.462 0.00 0.00 30.20 3.41
1002 1009 6.148480 GTGCTACATCATAAGATCCAACATCC 59.852 42.308 0.00 0.00 30.20 3.51
1003 1010 6.148480 GGTGCTACATCATAAGATCCAACATC 59.852 42.308 0.00 0.00 30.20 3.06
1004 1011 6.000219 GGTGCTACATCATAAGATCCAACAT 59.000 40.000 0.00 0.00 30.20 2.71
1005 1012 5.368145 GGTGCTACATCATAAGATCCAACA 58.632 41.667 0.00 0.00 30.20 3.33
1006 1013 4.757149 GGGTGCTACATCATAAGATCCAAC 59.243 45.833 0.00 0.00 30.20 3.77
1007 1014 4.503123 CGGGTGCTACATCATAAGATCCAA 60.503 45.833 0.00 0.00 30.20 3.53
1008 1015 3.006859 CGGGTGCTACATCATAAGATCCA 59.993 47.826 0.00 0.00 30.20 3.41
1009 1016 3.589988 CGGGTGCTACATCATAAGATCC 58.410 50.000 0.00 0.00 30.20 3.36
1010 1017 3.006967 ACCGGGTGCTACATCATAAGATC 59.993 47.826 6.32 0.00 30.20 2.75
1011 1018 2.972713 ACCGGGTGCTACATCATAAGAT 59.027 45.455 6.32 0.00 33.87 2.40
1012 1019 2.102420 CACCGGGTGCTACATCATAAGA 59.898 50.000 15.29 0.00 0.00 2.10
1013 1020 2.483876 CACCGGGTGCTACATCATAAG 58.516 52.381 15.29 0.00 0.00 1.73
1014 1021 1.140052 CCACCGGGTGCTACATCATAA 59.860 52.381 21.88 0.00 31.34 1.90
1015 1022 0.756294 CCACCGGGTGCTACATCATA 59.244 55.000 21.88 0.00 31.34 2.15
1016 1023 0.980754 TCCACCGGGTGCTACATCAT 60.981 55.000 21.88 0.00 34.93 2.45
1017 1024 0.980754 ATCCACCGGGTGCTACATCA 60.981 55.000 21.88 0.00 34.93 3.07
1018 1025 1.045407 TATCCACCGGGTGCTACATC 58.955 55.000 21.88 0.00 34.93 3.06
1019 1026 1.729586 ATATCCACCGGGTGCTACAT 58.270 50.000 21.88 11.96 34.93 2.29
1020 1027 1.502690 AATATCCACCGGGTGCTACA 58.497 50.000 21.88 6.55 34.93 2.74
1021 1028 2.632987 AAATATCCACCGGGTGCTAC 57.367 50.000 21.88 0.00 34.93 3.58
1022 1029 2.038033 GCTAAATATCCACCGGGTGCTA 59.962 50.000 21.88 14.69 34.93 3.49
1023 1030 1.202770 GCTAAATATCCACCGGGTGCT 60.203 52.381 21.88 12.98 34.93 4.40
1024 1031 1.202770 AGCTAAATATCCACCGGGTGC 60.203 52.381 21.88 6.94 34.93 5.01
1025 1032 2.930826 AGCTAAATATCCACCGGGTG 57.069 50.000 20.41 20.41 34.93 4.61
1026 1033 2.302157 GCTAGCTAAATATCCACCGGGT 59.698 50.000 7.70 0.00 34.93 5.28
1027 1034 2.301870 TGCTAGCTAAATATCCACCGGG 59.698 50.000 17.23 0.00 0.00 5.73
1028 1035 3.678056 TGCTAGCTAAATATCCACCGG 57.322 47.619 17.23 0.00 0.00 5.28
1029 1036 4.569943 ACATGCTAGCTAAATATCCACCG 58.430 43.478 17.23 0.00 0.00 4.94
1030 1037 7.331026 TGATACATGCTAGCTAAATATCCACC 58.669 38.462 17.23 0.00 0.00 4.61
1031 1038 8.954950 ATGATACATGCTAGCTAAATATCCAC 57.045 34.615 17.23 0.00 0.00 4.02
1032 1039 8.985922 AGATGATACATGCTAGCTAAATATCCA 58.014 33.333 17.23 5.15 0.00 3.41
1033 1040 9.829507 AAGATGATACATGCTAGCTAAATATCC 57.170 33.333 17.23 6.63 0.00 2.59
1036 1043 9.788960 CGTAAGATGATACATGCTAGCTAAATA 57.211 33.333 17.23 3.77 43.02 1.40
1037 1044 8.523658 TCGTAAGATGATACATGCTAGCTAAAT 58.476 33.333 17.23 4.26 45.01 1.40
1038 1045 7.882179 TCGTAAGATGATACATGCTAGCTAAA 58.118 34.615 17.23 0.00 45.01 1.85
1039 1046 7.448748 TCGTAAGATGATACATGCTAGCTAA 57.551 36.000 17.23 0.00 45.01 3.09
1041 1048 5.966742 TCGTAAGATGATACATGCTAGCT 57.033 39.130 17.23 0.00 45.01 3.32
1057 1064 9.809096 ATCTATACCATATTGCATTCTCGTAAG 57.191 33.333 0.00 0.00 0.00 2.34
1075 1082 9.810545 GCATACTTCTTCTGGATTATCTATACC 57.189 37.037 0.00 0.00 0.00 2.73
1083 1090 9.905713 ACTTTTATGCATACTTCTTCTGGATTA 57.094 29.630 5.74 0.00 0.00 1.75
1084 1091 8.814038 ACTTTTATGCATACTTCTTCTGGATT 57.186 30.769 5.74 0.00 0.00 3.01
1085 1092 7.500559 GGACTTTTATGCATACTTCTTCTGGAT 59.499 37.037 5.74 0.00 0.00 3.41
1086 1093 6.823689 GGACTTTTATGCATACTTCTTCTGGA 59.176 38.462 5.74 0.00 0.00 3.86
1087 1094 6.825721 AGGACTTTTATGCATACTTCTTCTGG 59.174 38.462 5.74 0.00 0.00 3.86
1088 1095 7.856145 AGGACTTTTATGCATACTTCTTCTG 57.144 36.000 5.74 0.00 0.00 3.02
1089 1096 7.148171 GCAAGGACTTTTATGCATACTTCTTCT 60.148 37.037 5.74 0.00 38.63 2.85
1090 1097 6.969473 GCAAGGACTTTTATGCATACTTCTTC 59.031 38.462 5.74 0.00 38.63 2.87
1091 1098 6.127619 GGCAAGGACTTTTATGCATACTTCTT 60.128 38.462 5.74 2.57 40.51 2.52
1092 1099 5.358160 GGCAAGGACTTTTATGCATACTTCT 59.642 40.000 5.74 0.00 40.51 2.85
1093 1100 5.450550 GGGCAAGGACTTTTATGCATACTTC 60.451 44.000 5.74 0.53 40.51 3.01
1094 1101 4.402474 GGGCAAGGACTTTTATGCATACTT 59.598 41.667 5.74 2.57 40.51 2.24
1095 1102 3.954258 GGGCAAGGACTTTTATGCATACT 59.046 43.478 5.74 0.00 40.51 2.12
1096 1103 3.699038 TGGGCAAGGACTTTTATGCATAC 59.301 43.478 5.74 0.00 40.51 2.39
1097 1104 3.974719 TGGGCAAGGACTTTTATGCATA 58.025 40.909 1.16 1.16 40.51 3.14
1098 1105 2.818921 TGGGCAAGGACTTTTATGCAT 58.181 42.857 3.79 3.79 40.51 3.96
1099 1106 2.300956 TGGGCAAGGACTTTTATGCA 57.699 45.000 0.00 0.00 40.51 3.96
1100 1107 3.676291 TTTGGGCAAGGACTTTTATGC 57.324 42.857 0.00 0.00 38.06 3.14
1101 1108 4.283212 TCCTTTTGGGCAAGGACTTTTATG 59.717 41.667 0.89 0.00 46.34 1.90
1102 1109 4.488770 TCCTTTTGGGCAAGGACTTTTAT 58.511 39.130 0.89 0.00 46.34 1.40
1103 1110 3.917300 TCCTTTTGGGCAAGGACTTTTA 58.083 40.909 0.89 0.00 46.34 1.52
1104 1111 2.758130 TCCTTTTGGGCAAGGACTTTT 58.242 42.857 0.89 0.00 46.34 2.27
1105 1112 2.470057 TCCTTTTGGGCAAGGACTTT 57.530 45.000 0.89 0.00 46.34 2.66
1109 1116 3.272020 AGGATTATCCTTTTGGGCAAGGA 59.728 43.478 8.15 7.20 46.91 3.36
1110 1117 3.646534 AGGATTATCCTTTTGGGCAAGG 58.353 45.455 8.15 0.00 46.91 3.61
1111 1118 5.694995 TCTAGGATTATCCTTTTGGGCAAG 58.305 41.667 19.79 7.98 46.91 4.01
1112 1119 5.725551 TCTAGGATTATCCTTTTGGGCAA 57.274 39.130 19.79 0.00 46.91 4.52
1113 1120 5.725551 TTCTAGGATTATCCTTTTGGGCA 57.274 39.130 19.79 0.00 46.91 5.36
1114 1121 6.209589 GGAATTCTAGGATTATCCTTTTGGGC 59.790 42.308 19.79 5.79 46.91 5.36
1115 1122 7.297614 TGGAATTCTAGGATTATCCTTTTGGG 58.702 38.462 19.79 5.50 46.91 4.12
1116 1123 8.946797 ATGGAATTCTAGGATTATCCTTTTGG 57.053 34.615 19.79 7.78 46.91 3.28
1117 1124 9.804977 AGATGGAATTCTAGGATTATCCTTTTG 57.195 33.333 19.79 10.14 46.91 2.44
1126 1133 8.824783 CCAGAAGATAGATGGAATTCTAGGATT 58.175 37.037 5.23 0.00 36.09 3.01
1127 1134 8.182885 TCCAGAAGATAGATGGAATTCTAGGAT 58.817 37.037 5.23 0.00 40.13 3.24
1128 1135 7.539292 TCCAGAAGATAGATGGAATTCTAGGA 58.461 38.462 5.23 0.00 40.13 2.94
1129 1136 7.789202 TCCAGAAGATAGATGGAATTCTAGG 57.211 40.000 5.23 0.00 40.13 3.02
1132 1139 7.943447 CCAAATCCAGAAGATAGATGGAATTCT 59.057 37.037 5.23 0.00 45.82 2.40
1133 1140 7.941238 TCCAAATCCAGAAGATAGATGGAATTC 59.059 37.037 0.00 0.00 45.82 2.17
1134 1141 7.819500 TCCAAATCCAGAAGATAGATGGAATT 58.180 34.615 0.00 0.00 45.82 2.17
1135 1142 7.294245 TCTCCAAATCCAGAAGATAGATGGAAT 59.706 37.037 0.00 0.00 45.82 3.01
1136 1143 6.616959 TCTCCAAATCCAGAAGATAGATGGAA 59.383 38.462 0.00 0.00 45.82 3.53
1137 1144 6.146047 TCTCCAAATCCAGAAGATAGATGGA 58.854 40.000 0.00 0.00 46.69 3.41
1138 1145 6.430962 TCTCCAAATCCAGAAGATAGATGG 57.569 41.667 0.00 0.00 35.86 3.51
1139 1146 7.441760 CACTTCTCCAAATCCAGAAGATAGATG 59.558 40.741 14.17 0.23 45.93 2.90
1140 1147 7.507829 CACTTCTCCAAATCCAGAAGATAGAT 58.492 38.462 14.17 0.00 45.93 1.98
1141 1148 6.631314 GCACTTCTCCAAATCCAGAAGATAGA 60.631 42.308 14.17 0.00 45.93 1.98
1142 1149 5.526846 GCACTTCTCCAAATCCAGAAGATAG 59.473 44.000 14.17 6.12 45.93 2.08
1143 1150 5.431765 GCACTTCTCCAAATCCAGAAGATA 58.568 41.667 14.17 0.00 45.93 1.98
1144 1151 4.268359 GCACTTCTCCAAATCCAGAAGAT 58.732 43.478 14.17 0.00 45.93 2.40
1145 1152 3.560025 GGCACTTCTCCAAATCCAGAAGA 60.560 47.826 14.17 0.00 45.93 2.87
1147 1154 2.795329 GGCACTTCTCCAAATCCAGAA 58.205 47.619 0.00 0.00 0.00 3.02
1148 1155 1.339055 CGGCACTTCTCCAAATCCAGA 60.339 52.381 0.00 0.00 0.00 3.86
1149 1156 1.089920 CGGCACTTCTCCAAATCCAG 58.910 55.000 0.00 0.00 0.00 3.86
1150 1157 0.690192 TCGGCACTTCTCCAAATCCA 59.310 50.000 0.00 0.00 0.00 3.41
1151 1158 2.044123 ATCGGCACTTCTCCAAATCC 57.956 50.000 0.00 0.00 0.00 3.01
1152 1159 4.082787 TGAAAATCGGCACTTCTCCAAATC 60.083 41.667 0.00 0.00 0.00 2.17
1153 1160 3.826157 TGAAAATCGGCACTTCTCCAAAT 59.174 39.130 0.00 0.00 0.00 2.32
1154 1161 3.218453 TGAAAATCGGCACTTCTCCAAA 58.782 40.909 0.00 0.00 0.00 3.28
1155 1162 2.857483 TGAAAATCGGCACTTCTCCAA 58.143 42.857 0.00 0.00 0.00 3.53
1156 1163 2.559698 TGAAAATCGGCACTTCTCCA 57.440 45.000 0.00 0.00 0.00 3.86
1157 1164 3.074412 TCTTGAAAATCGGCACTTCTCC 58.926 45.455 0.00 0.00 0.00 3.71
1158 1165 4.024048 TGTTCTTGAAAATCGGCACTTCTC 60.024 41.667 0.00 0.00 0.00 2.87
1159 1166 3.882888 TGTTCTTGAAAATCGGCACTTCT 59.117 39.130 0.00 0.00 0.00 2.85
1160 1167 3.975035 GTGTTCTTGAAAATCGGCACTTC 59.025 43.478 0.00 0.00 0.00 3.01
1161 1168 3.548014 CGTGTTCTTGAAAATCGGCACTT 60.548 43.478 0.00 0.00 0.00 3.16
1162 1169 2.032030 CGTGTTCTTGAAAATCGGCACT 60.032 45.455 0.00 0.00 0.00 4.40
1163 1170 2.032377 TCGTGTTCTTGAAAATCGGCAC 60.032 45.455 0.00 0.00 0.00 5.01
1164 1171 2.214347 TCGTGTTCTTGAAAATCGGCA 58.786 42.857 0.00 0.00 0.00 5.69
1165 1172 2.961522 TCGTGTTCTTGAAAATCGGC 57.038 45.000 0.00 0.00 0.00 5.54
1166 1173 5.283060 AGATTCGTGTTCTTGAAAATCGG 57.717 39.130 0.00 0.00 0.00 4.18
1167 1174 8.168626 TCATAAGATTCGTGTTCTTGAAAATCG 58.831 33.333 7.28 0.00 35.19 3.34
1168 1175 9.994432 ATCATAAGATTCGTGTTCTTGAAAATC 57.006 29.630 7.28 0.00 35.19 2.17
1172 1179 9.045223 CCATATCATAAGATTCGTGTTCTTGAA 57.955 33.333 7.28 0.00 35.19 2.69
1173 1180 8.204160 ACCATATCATAAGATTCGTGTTCTTGA 58.796 33.333 7.28 0.00 35.19 3.02
1174 1181 8.278408 CACCATATCATAAGATTCGTGTTCTTG 58.722 37.037 7.28 0.00 35.19 3.02
1175 1182 7.442364 CCACCATATCATAAGATTCGTGTTCTT 59.558 37.037 0.00 0.00 37.25 2.52
1176 1183 6.931281 CCACCATATCATAAGATTCGTGTTCT 59.069 38.462 0.00 0.00 35.67 3.01
1177 1184 6.147821 CCCACCATATCATAAGATTCGTGTTC 59.852 42.308 0.00 0.00 35.67 3.18
1178 1185 5.997746 CCCACCATATCATAAGATTCGTGTT 59.002 40.000 0.00 0.00 35.67 3.32
1179 1186 5.306937 TCCCACCATATCATAAGATTCGTGT 59.693 40.000 0.00 0.00 35.67 4.49
1180 1187 5.793817 TCCCACCATATCATAAGATTCGTG 58.206 41.667 0.00 0.00 35.67 4.35
1181 1188 6.433847 TTCCCACCATATCATAAGATTCGT 57.566 37.500 0.00 0.00 35.67 3.85
1182 1189 7.928307 AATTCCCACCATATCATAAGATTCG 57.072 36.000 0.00 0.00 35.67 3.34
1183 1190 9.525826 AGAAATTCCCACCATATCATAAGATTC 57.474 33.333 0.00 0.00 35.67 2.52
1184 1191 9.887862 AAGAAATTCCCACCATATCATAAGATT 57.112 29.630 0.00 0.00 35.67 2.40
1201 1208 9.774742 GCGTGGATAATTATCATAAGAAATTCC 57.225 33.333 23.54 7.01 34.40 3.01
1202 1209 9.774742 GGCGTGGATAATTATCATAAGAAATTC 57.225 33.333 23.54 6.07 34.40 2.17
1203 1210 9.520515 AGGCGTGGATAATTATCATAAGAAATT 57.479 29.630 23.54 2.00 34.40 1.82
1204 1211 9.520515 AAGGCGTGGATAATTATCATAAGAAAT 57.479 29.630 23.54 4.29 34.40 2.17
1205 1212 8.918202 AAGGCGTGGATAATTATCATAAGAAA 57.082 30.769 23.54 1.41 34.40 2.52
1209 1216 9.562408 TGTTTAAGGCGTGGATAATTATCATAA 57.438 29.630 23.54 8.73 34.40 1.90
1210 1217 9.733556 ATGTTTAAGGCGTGGATAATTATCATA 57.266 29.630 23.54 11.50 34.40 2.15
1211 1218 8.635765 ATGTTTAAGGCGTGGATAATTATCAT 57.364 30.769 23.54 5.06 34.40 2.45
1212 1219 9.733556 ATATGTTTAAGGCGTGGATAATTATCA 57.266 29.630 23.54 9.82 34.40 2.15
1214 1221 9.733556 TGATATGTTTAAGGCGTGGATAATTAT 57.266 29.630 0.00 0.00 0.00 1.28
1215 1222 9.733556 ATGATATGTTTAAGGCGTGGATAATTA 57.266 29.630 0.00 0.00 0.00 1.40
1216 1223 8.635765 ATGATATGTTTAAGGCGTGGATAATT 57.364 30.769 0.00 0.00 0.00 1.40
1217 1224 9.733556 TTATGATATGTTTAAGGCGTGGATAAT 57.266 29.630 0.00 0.00 0.00 1.28
1218 1225 9.733556 ATTATGATATGTTTAAGGCGTGGATAA 57.266 29.630 0.00 0.00 0.00 1.75
1219 1226 9.161629 CATTATGATATGTTTAAGGCGTGGATA 57.838 33.333 0.00 0.00 0.00 2.59
1220 1227 7.362056 GCATTATGATATGTTTAAGGCGTGGAT 60.362 37.037 0.00 0.00 0.00 3.41
1221 1228 6.072728 GCATTATGATATGTTTAAGGCGTGGA 60.073 38.462 0.00 0.00 0.00 4.02
1222 1229 6.086222 GCATTATGATATGTTTAAGGCGTGG 58.914 40.000 0.00 0.00 0.00 4.94
1223 1230 6.072508 AGGCATTATGATATGTTTAAGGCGTG 60.073 38.462 0.00 0.00 34.43 5.34
1224 1231 6.003950 AGGCATTATGATATGTTTAAGGCGT 58.996 36.000 0.00 0.00 34.43 5.68
1225 1232 6.149308 TCAGGCATTATGATATGTTTAAGGCG 59.851 38.462 0.00 0.00 34.43 5.52
1226 1233 7.452880 TCAGGCATTATGATATGTTTAAGGC 57.547 36.000 0.00 0.00 33.25 4.35
1227 1234 9.903682 CTTTCAGGCATTATGATATGTTTAAGG 57.096 33.333 0.00 0.00 0.00 2.69
1231 1238 8.199449 CCAACTTTCAGGCATTATGATATGTTT 58.801 33.333 0.00 0.00 0.00 2.83
1232 1239 7.560991 TCCAACTTTCAGGCATTATGATATGTT 59.439 33.333 0.00 0.00 0.00 2.71
1233 1240 7.062322 TCCAACTTTCAGGCATTATGATATGT 58.938 34.615 0.00 0.00 0.00 2.29
1234 1241 7.514784 TCCAACTTTCAGGCATTATGATATG 57.485 36.000 0.00 0.00 0.00 1.78
1235 1242 9.458727 CTATCCAACTTTCAGGCATTATGATAT 57.541 33.333 0.00 0.00 0.00 1.63
1236 1243 7.884877 CCTATCCAACTTTCAGGCATTATGATA 59.115 37.037 0.00 0.00 0.00 2.15
1237 1244 6.718454 CCTATCCAACTTTCAGGCATTATGAT 59.282 38.462 0.00 0.00 0.00 2.45
1238 1245 6.064060 CCTATCCAACTTTCAGGCATTATGA 58.936 40.000 0.00 0.00 0.00 2.15
1239 1246 6.323203 CCTATCCAACTTTCAGGCATTATG 57.677 41.667 0.00 0.00 0.00 1.90
1246 1253 2.424956 GCAAGCCTATCCAACTTTCAGG 59.575 50.000 0.00 0.00 0.00 3.86
1247 1254 2.424956 GGCAAGCCTATCCAACTTTCAG 59.575 50.000 3.29 0.00 0.00 3.02
1248 1255 2.446435 GGCAAGCCTATCCAACTTTCA 58.554 47.619 3.29 0.00 0.00 2.69
1249 1256 1.751351 GGGCAAGCCTATCCAACTTTC 59.249 52.381 11.40 0.00 36.10 2.62
1250 1257 1.359130 AGGGCAAGCCTATCCAACTTT 59.641 47.619 11.40 0.00 36.10 2.66
1251 1258 1.002857 AGGGCAAGCCTATCCAACTT 58.997 50.000 11.40 0.00 36.10 2.66
1252 1259 1.002857 AAGGGCAAGCCTATCCAACT 58.997 50.000 11.40 0.00 36.10 3.16
1253 1260 2.298610 GTAAGGGCAAGCCTATCCAAC 58.701 52.381 11.40 0.00 36.10 3.77
1254 1261 1.134220 CGTAAGGGCAAGCCTATCCAA 60.134 52.381 11.40 0.00 36.10 3.53
1255 1262 0.468226 CGTAAGGGCAAGCCTATCCA 59.532 55.000 11.40 0.00 36.10 3.41
1256 1263 0.468648 ACGTAAGGGCAAGCCTATCC 59.531 55.000 11.40 0.00 46.39 2.59
1257 1264 3.391049 CTTACGTAAGGGCAAGCCTATC 58.609 50.000 24.73 0.00 46.39 2.08
1258 1265 3.470645 CTTACGTAAGGGCAAGCCTAT 57.529 47.619 24.73 2.86 46.39 2.57
1259 1266 2.973694 CTTACGTAAGGGCAAGCCTA 57.026 50.000 24.73 0.00 46.39 3.93
1260 1267 3.855159 CTTACGTAAGGGCAAGCCT 57.145 52.632 24.73 0.00 46.39 4.58
1269 1276 8.137745 TGGGGGTTATATAATCCTTACGTAAG 57.862 38.462 25.33 25.33 36.68 2.34
1270 1277 8.503428 TTGGGGGTTATATAATCCTTACGTAA 57.497 34.615 21.58 7.94 36.68 3.18
1271 1278 8.683776 ATTGGGGGTTATATAATCCTTACGTA 57.316 34.615 21.58 0.00 36.68 3.57
1272 1279 7.578458 ATTGGGGGTTATATAATCCTTACGT 57.422 36.000 21.58 0.00 36.68 3.57
1273 1280 8.873186 AAATTGGGGGTTATATAATCCTTACG 57.127 34.615 21.58 0.00 36.68 3.18
1306 1313 9.788889 TCTTATCATTCAATGAGCATCTTGTAT 57.211 29.630 6.19 0.00 43.53 2.29
1307 1314 9.617523 TTCTTATCATTCAATGAGCATCTTGTA 57.382 29.630 6.19 0.00 43.53 2.41
1308 1315 8.515695 TTCTTATCATTCAATGAGCATCTTGT 57.484 30.769 6.19 0.00 43.53 3.16
1309 1316 9.967346 ATTTCTTATCATTCAATGAGCATCTTG 57.033 29.630 6.19 0.00 43.53 3.02
1312 1319 9.961265 TGAATTTCTTATCATTCAATGAGCATC 57.039 29.630 6.19 0.00 43.53 3.91
1314 1321 9.744468 CATGAATTTCTTATCATTCAATGAGCA 57.256 29.630 6.19 0.00 43.53 4.26
1315 1322 8.700644 GCATGAATTTCTTATCATTCAATGAGC 58.299 33.333 6.19 0.00 43.53 4.26
1316 1323 9.967346 AGCATGAATTTCTTATCATTCAATGAG 57.033 29.630 6.19 0.00 43.53 2.90
1317 1324 9.961265 GAGCATGAATTTCTTATCATTCAATGA 57.039 29.630 1.59 1.59 41.58 2.57
1318 1325 9.744468 TGAGCATGAATTTCTTATCATTCAATG 57.256 29.630 0.00 0.00 41.58 2.82
1319 1326 9.745880 GTGAGCATGAATTTCTTATCATTCAAT 57.254 29.630 0.00 0.00 41.58 2.57
1320 1327 8.963725 AGTGAGCATGAATTTCTTATCATTCAA 58.036 29.630 0.00 0.00 41.58 2.69
1321 1328 8.515695 AGTGAGCATGAATTTCTTATCATTCA 57.484 30.769 0.00 0.00 42.27 2.57
1330 1337 9.846248 GTGTTTTATAAGTGAGCATGAATTTCT 57.154 29.630 0.00 0.00 0.00 2.52
1331 1338 9.624697 TGTGTTTTATAAGTGAGCATGAATTTC 57.375 29.630 0.00 0.00 0.00 2.17
1332 1339 9.979578 TTGTGTTTTATAAGTGAGCATGAATTT 57.020 25.926 0.00 0.00 0.00 1.82
1333 1340 9.410556 GTTGTGTTTTATAAGTGAGCATGAATT 57.589 29.630 0.00 0.00 0.00 2.17
1334 1341 8.796475 AGTTGTGTTTTATAAGTGAGCATGAAT 58.204 29.630 0.00 0.00 0.00 2.57
1335 1342 8.165239 AGTTGTGTTTTATAAGTGAGCATGAA 57.835 30.769 0.00 0.00 0.00 2.57
1336 1343 7.094805 GGAGTTGTGTTTTATAAGTGAGCATGA 60.095 37.037 0.00 0.00 0.00 3.07
1337 1344 7.023575 GGAGTTGTGTTTTATAAGTGAGCATG 58.976 38.462 0.00 0.00 0.00 4.06
1338 1345 6.714810 TGGAGTTGTGTTTTATAAGTGAGCAT 59.285 34.615 0.00 0.00 0.00 3.79
1339 1346 6.058833 TGGAGTTGTGTTTTATAAGTGAGCA 58.941 36.000 0.00 0.00 0.00 4.26
1340 1347 6.426937 TCTGGAGTTGTGTTTTATAAGTGAGC 59.573 38.462 0.00 0.00 0.00 4.26
1341 1348 7.962964 TCTGGAGTTGTGTTTTATAAGTGAG 57.037 36.000 0.00 0.00 0.00 3.51
1342 1349 8.918202 AATCTGGAGTTGTGTTTTATAAGTGA 57.082 30.769 0.00 0.00 0.00 3.41
1343 1350 9.965824 AAAATCTGGAGTTGTGTTTTATAAGTG 57.034 29.630 0.00 0.00 0.00 3.16
1350 1357 9.533253 CTTGAATAAAATCTGGAGTTGTGTTTT 57.467 29.630 0.00 0.00 0.00 2.43
1351 1358 8.695456 ACTTGAATAAAATCTGGAGTTGTGTTT 58.305 29.630 0.00 0.00 0.00 2.83
1352 1359 8.237811 ACTTGAATAAAATCTGGAGTTGTGTT 57.762 30.769 0.00 0.00 0.00 3.32
1353 1360 7.502226 TGACTTGAATAAAATCTGGAGTTGTGT 59.498 33.333 0.00 0.00 0.00 3.72
1354 1361 7.874940 TGACTTGAATAAAATCTGGAGTTGTG 58.125 34.615 0.00 0.00 0.00 3.33
1355 1362 8.463930 TTGACTTGAATAAAATCTGGAGTTGT 57.536 30.769 0.00 0.00 0.00 3.32
1356 1363 8.025445 CCTTGACTTGAATAAAATCTGGAGTTG 58.975 37.037 0.00 0.00 0.00 3.16
1357 1364 7.944554 TCCTTGACTTGAATAAAATCTGGAGTT 59.055 33.333 0.00 0.00 0.00 3.01
1358 1365 7.461749 TCCTTGACTTGAATAAAATCTGGAGT 58.538 34.615 0.00 0.00 0.00 3.85
1359 1366 7.928307 TCCTTGACTTGAATAAAATCTGGAG 57.072 36.000 0.00 0.00 0.00 3.86
1360 1367 8.884124 ATTCCTTGACTTGAATAAAATCTGGA 57.116 30.769 0.00 0.00 29.67 3.86
1372 1379 9.807921 AGAACCTAAAAATATTCCTTGACTTGA 57.192 29.630 0.00 0.00 0.00 3.02
1392 1399 9.844257 CATTTCTATCATCTAGGAAAAGAACCT 57.156 33.333 0.00 0.00 41.05 3.50
1393 1400 9.838339 TCATTTCTATCATCTAGGAAAAGAACC 57.162 33.333 0.00 0.00 32.60 3.62
1397 1404 9.709495 CCTCTCATTTCTATCATCTAGGAAAAG 57.291 37.037 0.00 0.00 32.60 2.27
1398 1405 8.654997 CCCTCTCATTTCTATCATCTAGGAAAA 58.345 37.037 0.00 0.00 32.60 2.29
1399 1406 8.013072 TCCCTCTCATTTCTATCATCTAGGAAA 58.987 37.037 0.00 0.00 33.23 3.13
1400 1407 7.539292 TCCCTCTCATTTCTATCATCTAGGAA 58.461 38.462 0.00 0.00 0.00 3.36
1401 1408 7.019053 TCTCCCTCTCATTTCTATCATCTAGGA 59.981 40.741 0.00 0.00 0.00 2.94
1402 1409 7.181361 TCTCCCTCTCATTTCTATCATCTAGG 58.819 42.308 0.00 0.00 0.00 3.02
1403 1410 7.890127 ACTCTCCCTCTCATTTCTATCATCTAG 59.110 40.741 0.00 0.00 0.00 2.43
1404 1411 7.669304 CACTCTCCCTCTCATTTCTATCATCTA 59.331 40.741 0.00 0.00 0.00 1.98
1405 1412 6.494491 CACTCTCCCTCTCATTTCTATCATCT 59.506 42.308 0.00 0.00 0.00 2.90
1406 1413 6.267471 ACACTCTCCCTCTCATTTCTATCATC 59.733 42.308 0.00 0.00 0.00 2.92
1407 1414 6.041865 CACACTCTCCCTCTCATTTCTATCAT 59.958 42.308 0.00 0.00 0.00 2.45
1408 1415 5.362143 CACACTCTCCCTCTCATTTCTATCA 59.638 44.000 0.00 0.00 0.00 2.15
1409 1416 5.362430 ACACACTCTCCCTCTCATTTCTATC 59.638 44.000 0.00 0.00 0.00 2.08
1421 1430 3.627747 GGGTACATAGACACACTCTCCCT 60.628 52.174 0.00 0.00 0.00 4.20
1550 1561 1.409064 AGAACGTCACTGAGCTGAACA 59.591 47.619 0.00 0.00 0.00 3.18
1560 1571 1.606903 AGAAGTCGGAGAACGTCACT 58.393 50.000 0.00 0.00 44.69 3.41
1568 1579 1.478510 GCTGGATCAAGAAGTCGGAGA 59.521 52.381 0.00 0.00 0.00 3.71
1698 1709 1.996086 CCCCCTCCACCGTTTACAT 59.004 57.895 0.00 0.00 0.00 2.29
1802 1830 0.765510 GGATTCGGCCTACTTGGGAT 59.234 55.000 0.00 0.00 36.00 3.85
1803 1831 0.326238 AGGATTCGGCCTACTTGGGA 60.326 55.000 0.00 0.00 36.22 4.37
1841 1869 1.858739 AATAAGGAAGGGGCGCCACA 61.859 55.000 34.08 9.57 0.00 4.17
1870 1903 3.383223 CCATCTCCTCCTTTCTTCCTCT 58.617 50.000 0.00 0.00 0.00 3.69
1878 1911 2.592308 GGCGCCATCTCCTCCTTT 59.408 61.111 24.80 0.00 0.00 3.11
1888 1921 3.238197 AAAGGAAAGGGGGCGCCAT 62.238 57.895 30.85 12.63 0.00 4.40
2200 2240 7.392494 TGTTTTTGTGCCCGAATATTGTATA 57.608 32.000 0.00 0.00 0.00 1.47
2201 2241 6.274157 TGTTTTTGTGCCCGAATATTGTAT 57.726 33.333 0.00 0.00 0.00 2.29
2207 2247 7.337184 TGAGTTATATGTTTTTGTGCCCGAATA 59.663 33.333 0.00 0.00 0.00 1.75
2251 2291 4.103357 GTCTGCATGCTTGAATGTTCATC 58.897 43.478 20.33 0.00 37.00 2.92
2258 2298 3.370840 TTAGGGTCTGCATGCTTGAAT 57.629 42.857 20.33 9.08 0.00 2.57
2261 2301 1.747355 CCTTTAGGGTCTGCATGCTTG 59.253 52.381 20.33 11.88 0.00 4.01
2278 2318 6.377429 TCATGTCTACATAGTTCTCGAACCTT 59.623 38.462 6.20 0.00 36.90 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.