Multiple sequence alignment - TraesCS2A01G343600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G343600 chr2A 100.000 4344 0 0 1 4344 580381533 580385876 0.000000e+00 8022.0
1 TraesCS2A01G343600 chr2A 100.000 505 0 0 4601 5105 580386133 580386637 0.000000e+00 933.0
2 TraesCS2A01G343600 chr2A 79.604 657 97 24 3391 4039 580721497 580722124 2.180000e-118 436.0
3 TraesCS2A01G343600 chr2A 79.460 667 97 28 3390 4047 580760486 580761121 2.180000e-118 436.0
4 TraesCS2A01G343600 chr2A 79.257 646 105 15 3390 4031 580253388 580254008 1.700000e-114 424.0
5 TraesCS2A01G343600 chr2A 77.376 663 110 28 3389 4041 580282119 580282751 1.750000e-94 357.0
6 TraesCS2A01G343600 chr2A 76.733 649 120 19 3389 4032 580324440 580325062 2.950000e-87 333.0
7 TraesCS2A01G343600 chr2A 93.333 60 1 3 2892 2951 197673598 197673542 9.110000e-13 86.1
8 TraesCS2A01G343600 chr2A 90.769 65 2 3 2882 2944 704759535 704759597 3.280000e-12 84.2
9 TraesCS2A01G343600 chr2D 90.533 1500 80 18 2 1474 413347413 413348877 0.000000e+00 1927.0
10 TraesCS2A01G343600 chr2D 93.410 1214 52 15 2976 4171 413353115 413354318 0.000000e+00 1773.0
11 TraesCS2A01G343600 chr2D 88.480 816 38 23 2131 2896 413352244 413353053 0.000000e+00 935.0
12 TraesCS2A01G343600 chr2D 92.761 373 17 4 1620 1985 413349148 413349517 9.730000e-147 531.0
13 TraesCS2A01G343600 chr2D 79.542 655 101 22 3391 4039 413691315 413691942 2.180000e-118 436.0
14 TraesCS2A01G343600 chr2D 92.000 150 10 1 1473 1620 413348937 413349086 5.180000e-50 209.0
15 TraesCS2A01G343600 chr2D 93.827 81 4 1 1997 2077 413352067 413352146 2.500000e-23 121.0
16 TraesCS2A01G343600 chr2D 91.860 86 5 1 4177 4260 413354532 413354617 8.980000e-23 119.0
17 TraesCS2A01G343600 chr2D 87.838 74 3 3 2901 2969 574569823 574569751 1.180000e-11 82.4
18 TraesCS2A01G343600 chr2B 96.094 896 28 6 3368 4260 486843631 486844522 0.000000e+00 1454.0
19 TraesCS2A01G343600 chr2B 84.461 1197 105 41 308 1474 486840418 486841563 0.000000e+00 1105.0
20 TraesCS2A01G343600 chr2B 87.925 795 49 20 2131 2888 486842329 486843113 0.000000e+00 893.0
21 TraesCS2A01G343600 chr2B 87.819 509 54 5 4601 5105 486863939 486864443 1.580000e-164 590.0
22 TraesCS2A01G343600 chr2B 79.279 666 99 27 3391 4047 486952507 486953142 3.650000e-116 429.0
23 TraesCS2A01G343600 chr2B 87.147 389 26 8 1767 2131 486841912 486842300 2.200000e-113 420.0
24 TraesCS2A01G343600 chr2B 77.898 647 112 19 3390 4031 486588817 486589437 1.740000e-99 374.0
25 TraesCS2A01G343600 chr2B 92.275 233 12 5 3006 3235 486843175 486843404 4.930000e-85 326.0
26 TraesCS2A01G343600 chr2B 94.030 67 3 1 2900 2965 12076247 12076313 3.250000e-17 100.0
27 TraesCS2A01G343600 chr2B 89.855 69 3 4 2884 2951 23730166 23730101 9.110000e-13 86.1
28 TraesCS2A01G343600 chr7B 81.720 651 87 22 3391 4037 72437077 72437699 9.800000e-142 514.0
29 TraesCS2A01G343600 chr7B 79.970 669 103 21 3391 4054 72513160 72513802 1.000000e-126 464.0
30 TraesCS2A01G343600 chr7D 80.213 657 101 19 3391 4045 112947715 112948344 2.780000e-127 466.0
31 TraesCS2A01G343600 chr7D 77.979 663 97 31 3391 4041 112949077 112949702 2.250000e-98 370.0
32 TraesCS2A01G343600 chr7D 84.337 166 24 2 4691 4855 234180754 234180590 1.470000e-35 161.0
33 TraesCS2A01G343600 chr7A 83.175 315 39 11 3729 4041 118208284 118208586 5.030000e-70 276.0
34 TraesCS2A01G343600 chrUn 94.286 70 2 2 2901 2968 27338329 27338398 6.990000e-19 106.0
35 TraesCS2A01G343600 chr3D 92.537 67 5 0 2901 2967 14221590 14221656 4.210000e-16 97.1
36 TraesCS2A01G343600 chr3D 92.683 41 2 1 2944 2983 142089824 142089864 1.990000e-04 58.4
37 TraesCS2A01G343600 chr5A 90.909 66 4 2 2891 2954 453187929 453187864 2.530000e-13 87.9
38 TraesCS2A01G343600 chr6D 87.671 73 7 2 2899 2970 129780500 129780571 3.280000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G343600 chr2A 580381533 580386637 5104 False 4477.500000 8022 100.000000 1 5105 2 chr2A.!!$F7 5104
1 TraesCS2A01G343600 chr2A 580721497 580722124 627 False 436.000000 436 79.604000 3391 4039 1 chr2A.!!$F4 648
2 TraesCS2A01G343600 chr2A 580760486 580761121 635 False 436.000000 436 79.460000 3390 4047 1 chr2A.!!$F5 657
3 TraesCS2A01G343600 chr2A 580253388 580254008 620 False 424.000000 424 79.257000 3390 4031 1 chr2A.!!$F1 641
4 TraesCS2A01G343600 chr2A 580282119 580282751 632 False 357.000000 357 77.376000 3389 4041 1 chr2A.!!$F2 652
5 TraesCS2A01G343600 chr2A 580324440 580325062 622 False 333.000000 333 76.733000 3389 4032 1 chr2A.!!$F3 643
6 TraesCS2A01G343600 chr2D 413347413 413354617 7204 False 802.142857 1927 91.838714 2 4260 7 chr2D.!!$F2 4258
7 TraesCS2A01G343600 chr2D 413691315 413691942 627 False 436.000000 436 79.542000 3391 4039 1 chr2D.!!$F1 648
8 TraesCS2A01G343600 chr2B 486840418 486844522 4104 False 839.600000 1454 89.580400 308 4260 5 chr2B.!!$F5 3952
9 TraesCS2A01G343600 chr2B 486863939 486864443 504 False 590.000000 590 87.819000 4601 5105 1 chr2B.!!$F3 504
10 TraesCS2A01G343600 chr2B 486952507 486953142 635 False 429.000000 429 79.279000 3391 4047 1 chr2B.!!$F4 656
11 TraesCS2A01G343600 chr2B 486588817 486589437 620 False 374.000000 374 77.898000 3390 4031 1 chr2B.!!$F2 641
12 TraesCS2A01G343600 chr7B 72437077 72437699 622 False 514.000000 514 81.720000 3391 4037 1 chr7B.!!$F1 646
13 TraesCS2A01G343600 chr7B 72513160 72513802 642 False 464.000000 464 79.970000 3391 4054 1 chr7B.!!$F2 663
14 TraesCS2A01G343600 chr7D 112947715 112949702 1987 False 418.000000 466 79.096000 3391 4045 2 chr7D.!!$F1 654

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
215 216 0.250553 ATTCGGCCGTTCCAAACAGA 60.251 50.000 27.15 0.00 34.01 3.41 F
828 829 0.461339 GACGAGAGGAGCGAGTCTCT 60.461 60.000 9.61 5.96 42.44 3.10 F
1700 1885 0.472471 TTCCAGACAAGGTGGTCCAC 59.528 55.000 14.13 14.13 38.59 4.02 F
1972 2163 0.729116 CATGTGATGCCGGTCTTGAC 59.271 55.000 1.90 0.00 0.00 3.18 F
2266 5039 0.798776 CCAGTTACTTTGGAGCGCTG 59.201 55.000 18.48 1.17 37.96 5.18 F
2829 5651 1.414181 ACCCCATCATGAAGAGTAGCG 59.586 52.381 0.00 0.00 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1650 1835 0.040958 GCAATATTGAAGCCGGCGAG 60.041 55.0 23.20 5.30 0.00 5.03 R
1784 1970 0.589729 GCGTGGCGATTGCAACATAG 60.590 55.0 13.09 0.00 45.98 2.23 R
3039 5868 0.103937 TTTGCCTCGGCCAGTTTTTG 59.896 50.0 2.24 0.00 41.09 2.44 R
3084 5914 0.250424 TGATGGTGTGGTCACTGCTG 60.250 55.0 2.66 0.00 43.41 4.41 R
3092 5922 0.405198 TGAAGGCATGATGGTGTGGT 59.595 50.0 0.00 0.00 0.00 4.16 R
4271 8813 0.179145 ACGGATACAAAGGAGACGCG 60.179 55.0 3.53 3.53 0.00 6.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 1.937546 GCGACCAATTTGGCCAGAGG 61.938 60.000 15.49 9.42 42.67 3.69
93 94 1.429423 CAATTCCTTCGCCGCTTCC 59.571 57.895 0.00 0.00 0.00 3.46
94 95 2.106683 AATTCCTTCGCCGCTTCCG 61.107 57.895 0.00 0.00 0.00 4.30
124 125 1.358046 GCGAGCTCATGCCATTTCC 59.642 57.895 15.40 0.00 40.80 3.13
168 169 1.923395 TTCCCCTCCCTTGCATCGT 60.923 57.895 0.00 0.00 0.00 3.73
174 175 2.892425 CCCTTGCATCGTCCGAGC 60.892 66.667 0.00 0.44 0.00 5.03
188 189 1.691976 TCCGAGCCTGTTTGAGAGAAA 59.308 47.619 0.00 0.00 0.00 2.52
195 196 3.160269 CCTGTTTGAGAGAAAATGGCCT 58.840 45.455 3.32 0.00 0.00 5.19
201 202 3.808728 TGAGAGAAAATGGCCTATTCGG 58.191 45.455 3.32 0.00 0.00 4.30
211 212 3.162448 CCTATTCGGCCGTTCCAAA 57.838 52.632 27.15 12.35 34.01 3.28
215 216 0.250553 ATTCGGCCGTTCCAAACAGA 60.251 50.000 27.15 0.00 34.01 3.41
217 218 0.672401 TCGGCCGTTCCAAACAGATC 60.672 55.000 27.15 0.00 34.01 2.75
221 222 1.610624 GCCGTTCCAAACAGATCTGGA 60.611 52.381 26.08 12.26 40.03 3.86
230 231 0.769873 ACAGATCTGGATGGGGATGC 59.230 55.000 26.08 0.00 34.19 3.91
241 242 3.503748 GGATGGGGATGCTTTAAGATTCG 59.496 47.826 0.00 0.00 0.00 3.34
243 244 3.278574 TGGGGATGCTTTAAGATTCGTG 58.721 45.455 0.00 0.00 0.00 4.35
247 248 4.024809 GGGATGCTTTAAGATTCGTGCTAC 60.025 45.833 0.00 0.00 0.00 3.58
251 252 3.181524 GCTTTAAGATTCGTGCTACGCAA 60.182 43.478 0.00 1.58 41.47 4.85
262 263 2.911819 GCTACGCAAAGCAAATACCA 57.088 45.000 2.52 0.00 42.30 3.25
263 264 2.785679 GCTACGCAAAGCAAATACCAG 58.214 47.619 2.52 0.00 42.30 4.00
277 278 6.027749 GCAAATACCAGTAAACACATGCTAC 58.972 40.000 0.00 0.00 0.00 3.58
331 332 5.552178 GTGATTTAGGGGAATACAGGCTAG 58.448 45.833 0.00 0.00 0.00 3.42
415 416 2.422127 GCGCATTGCCTAGGTAAGAAAA 59.578 45.455 17.74 0.00 37.76 2.29
451 452 1.704070 GCTTATCGGAGGCGAATCTC 58.296 55.000 0.00 0.00 0.00 2.75
466 467 4.856607 CTCGCCCGAGAAGACGCC 62.857 72.222 12.04 0.00 44.53 5.68
509 510 3.840882 AACCCGTTCTCCCCCGAGT 62.841 63.158 0.00 0.00 37.40 4.18
511 512 3.823330 CCGTTCTCCCCCGAGTCG 61.823 72.222 5.29 5.29 37.40 4.18
545 546 0.923729 ATTATCACCCCTGCCCCACA 60.924 55.000 0.00 0.00 0.00 4.17
627 628 2.705658 TCTCCGCATCAATAATCCCACT 59.294 45.455 0.00 0.00 0.00 4.00
628 629 3.070018 CTCCGCATCAATAATCCCACTC 58.930 50.000 0.00 0.00 0.00 3.51
629 630 2.154462 CCGCATCAATAATCCCACTCC 58.846 52.381 0.00 0.00 0.00 3.85
630 631 2.154462 CGCATCAATAATCCCACTCCC 58.846 52.381 0.00 0.00 0.00 4.30
631 632 2.487086 CGCATCAATAATCCCACTCCCA 60.487 50.000 0.00 0.00 0.00 4.37
632 633 2.887152 GCATCAATAATCCCACTCCCAC 59.113 50.000 0.00 0.00 0.00 4.61
689 690 0.741915 AAACAAACACGATGCCGGTT 59.258 45.000 1.90 0.00 40.78 4.44
828 829 0.461339 GACGAGAGGAGCGAGTCTCT 60.461 60.000 9.61 5.96 42.44 3.10
880 894 4.579869 AGACAAAGCCGTGACATTTCTAT 58.420 39.130 0.00 0.00 0.00 1.98
881 895 4.393062 AGACAAAGCCGTGACATTTCTATG 59.607 41.667 0.00 0.00 37.79 2.23
882 896 3.440173 ACAAAGCCGTGACATTTCTATGG 59.560 43.478 0.00 0.00 36.01 2.74
883 897 3.627395 AAGCCGTGACATTTCTATGGA 57.373 42.857 0.00 0.00 36.01 3.41
884 898 2.906354 AGCCGTGACATTTCTATGGAC 58.094 47.619 0.00 0.00 36.01 4.02
885 899 2.501723 AGCCGTGACATTTCTATGGACT 59.498 45.455 0.00 0.00 36.01 3.85
886 900 3.704566 AGCCGTGACATTTCTATGGACTA 59.295 43.478 0.00 0.00 36.01 2.59
922 937 1.228459 AAACCGAGGGGGAAACAGC 60.228 57.895 0.00 0.00 39.97 4.40
927 942 1.002011 GAGGGGGAAACAGCCACTC 60.002 63.158 0.00 0.00 0.00 3.51
1034 1067 2.595463 CTGCACACCCACCCAGTG 60.595 66.667 0.00 0.00 41.15 3.66
1084 1128 3.755628 AGCTTGCAGCAATGGCCG 61.756 61.111 8.67 0.00 45.56 6.13
1131 1187 4.077188 GTGTGCCTCGCGTGCTTC 62.077 66.667 20.44 14.73 0.00 3.86
1274 1330 2.558359 CCAAAGGTGTGTCTTGGGATTC 59.442 50.000 0.00 0.00 39.64 2.52
1279 1335 1.066430 GTGTGTCTTGGGATTCCGCTA 60.066 52.381 0.00 0.00 35.24 4.26
1282 1338 1.230324 GTCTTGGGATTCCGCTATGC 58.770 55.000 0.00 0.00 35.24 3.14
1315 1371 1.916000 GATCTTGCGATGCTTTTGTGC 59.084 47.619 0.00 0.00 0.00 4.57
1323 1379 2.125952 GCTTTTGTGCCCGCCATC 60.126 61.111 0.00 0.00 0.00 3.51
1324 1380 2.929903 GCTTTTGTGCCCGCCATCA 61.930 57.895 0.00 0.00 0.00 3.07
1325 1381 1.213537 CTTTTGTGCCCGCCATCAG 59.786 57.895 0.00 0.00 0.00 2.90
1326 1382 2.216750 CTTTTGTGCCCGCCATCAGG 62.217 60.000 0.00 0.00 38.23 3.86
1327 1383 2.705312 TTTTGTGCCCGCCATCAGGA 62.705 55.000 0.00 0.00 36.89 3.86
1353 1409 5.510349 GGAATTCTGCCTGAGCTTTTCTTTT 60.510 40.000 5.23 0.00 40.80 2.27
1374 1430 2.348472 TCTCTGTCAGGGAATTTGGGT 58.652 47.619 0.00 0.00 0.00 4.51
1403 1459 1.586422 CTTGGCTATGACACCATCGG 58.414 55.000 0.00 0.00 35.42 4.18
1434 1490 4.577834 TGTAAGTTCACACACTCGATCA 57.422 40.909 0.00 0.00 0.00 2.92
1463 1519 7.110155 TCATCCATAAACCCACTCTTCTTTAC 58.890 38.462 0.00 0.00 0.00 2.01
1470 1526 9.892130 ATAAACCCACTCTTCTTTACTGATTAG 57.108 33.333 0.00 0.00 0.00 1.73
1499 1616 4.272489 TCAGTTTTGGCATCCTAGATTGG 58.728 43.478 0.00 0.00 0.00 3.16
1531 1649 2.291465 AGAACAGCGTAACGTACAGACA 59.709 45.455 0.00 0.00 0.00 3.41
1616 1739 1.582610 GCATTTCGAAACGGCAGGGA 61.583 55.000 23.85 0.00 0.00 4.20
1650 1835 7.041508 AGCTCATCAATTCATTTAGAATCCGTC 60.042 37.037 0.00 0.00 46.09 4.79
1663 1848 4.735132 CCGTCTCGCCGGCTTCAA 62.735 66.667 26.68 6.18 41.78 2.69
1667 1852 1.583054 GTCTCGCCGGCTTCAATATT 58.417 50.000 26.68 0.00 0.00 1.28
1668 1853 1.261619 GTCTCGCCGGCTTCAATATTG 59.738 52.381 26.68 9.29 0.00 1.90
1686 1871 9.352784 TCAATATTGCGAGTTAAAATTTTCCAG 57.647 29.630 10.76 0.00 0.00 3.86
1692 1877 5.629435 GCGAGTTAAAATTTTCCAGACAAGG 59.371 40.000 6.72 0.00 0.00 3.61
1700 1885 0.472471 TTCCAGACAAGGTGGTCCAC 59.528 55.000 14.13 14.13 38.59 4.02
1734 1919 4.165372 ACACTCCCTCTTGAACTAAAACCA 59.835 41.667 0.00 0.00 0.00 3.67
1753 1938 2.357154 CCAGGTCACTTATTTGGGAGGG 60.357 54.545 0.00 0.00 0.00 4.30
1774 1959 4.226620 GGGAGGGGTACTAGAAAACAATCA 59.773 45.833 0.00 0.00 0.00 2.57
1783 1969 6.449635 ACTAGAAAACAATCAGCACACAAA 57.550 33.333 0.00 0.00 0.00 2.83
1784 1970 6.265577 ACTAGAAAACAATCAGCACACAAAC 58.734 36.000 0.00 0.00 0.00 2.93
1806 1992 3.736100 TTGCAATCGCCACGCCTG 61.736 61.111 0.00 0.00 37.32 4.85
1862 2053 8.624028 GTTACATAACAAAACATGTAAAGCGAC 58.376 33.333 0.00 0.00 44.78 5.19
1972 2163 0.729116 CATGTGATGCCGGTCTTGAC 59.271 55.000 1.90 0.00 0.00 3.18
1998 4717 7.178451 CCACCATTAACTTATCCTCCACTTTTT 59.822 37.037 0.00 0.00 0.00 1.94
2029 4757 4.588528 TCTTCCATCAAGTTTCTTTTGGGG 59.411 41.667 7.78 0.00 33.27 4.96
2077 4805 6.780706 AAGGTTACAATTTAGTCACACGAG 57.219 37.500 0.00 0.00 0.00 4.18
2078 4806 4.689345 AGGTTACAATTTAGTCACACGAGC 59.311 41.667 0.00 0.00 0.00 5.03
2095 4836 4.733405 CACGAGCTTGTTGAAAAAGTTACC 59.267 41.667 3.02 0.00 0.00 2.85
2101 4843 5.538118 CTTGTTGAAAAAGTTACCCCATCC 58.462 41.667 0.00 0.00 0.00 3.51
2160 4932 6.486253 TGACAGTTCAGAGTGATTAATTGC 57.514 37.500 0.00 0.00 0.00 3.56
2162 4934 6.656270 TGACAGTTCAGAGTGATTAATTGCAT 59.344 34.615 0.00 0.00 0.00 3.96
2164 4936 6.183360 ACAGTTCAGAGTGATTAATTGCATCG 60.183 38.462 0.00 0.00 0.00 3.84
2186 4958 8.834465 CATCGAATTATCTCCTCAAACTCAAAT 58.166 33.333 0.00 0.00 0.00 2.32
2194 4966 8.655935 ATCTCCTCAAACTCAAATGGTAAATT 57.344 30.769 0.00 0.00 0.00 1.82
2266 5039 0.798776 CCAGTTACTTTGGAGCGCTG 59.201 55.000 18.48 1.17 37.96 5.18
2368 5149 3.728864 GCAAGAACGCACTTCATGGTATG 60.729 47.826 0.00 0.00 29.72 2.39
2396 5177 8.023021 TGCTCCACAGTTTAGATATCTATGTT 57.977 34.615 13.22 0.00 0.00 2.71
2398 5179 9.982651 GCTCCACAGTTTAGATATCTATGTTAA 57.017 33.333 13.22 2.18 0.00 2.01
2645 5429 7.770433 TGATCTTCAAATATCGGTCACTTTCAT 59.230 33.333 0.00 0.00 0.00 2.57
2654 5446 8.818141 ATATCGGTCACTTTCATGTACTATTG 57.182 34.615 0.00 0.00 0.00 1.90
2725 5517 4.377021 TGACCTTGTGTGTTGTACTCATC 58.623 43.478 0.00 0.00 33.25 2.92
2726 5518 4.100963 TGACCTTGTGTGTTGTACTCATCT 59.899 41.667 0.00 0.00 33.25 2.90
2731 5523 4.503910 TGTGTGTTGTACTCATCTATGGC 58.496 43.478 0.00 0.00 0.00 4.40
2754 5546 6.349611 GGCAATTTAAGAGCTGAAACATCAGA 60.350 38.462 9.89 0.00 39.99 3.27
2765 5557 6.762187 AGCTGAAACATCAGACATGATTCTAG 59.238 38.462 9.89 0.00 43.92 2.43
2770 5562 9.371136 GAAACATCAGACATGATTCTAGTGTAA 57.629 33.333 0.00 0.00 43.92 2.41
2773 5565 9.973450 ACATCAGACATGATTCTAGTGTAATAC 57.027 33.333 0.00 0.00 43.92 1.89
2774 5566 9.971922 CATCAGACATGATTCTAGTGTAATACA 57.028 33.333 0.00 0.00 43.92 2.29
2776 5568 9.190317 TCAGACATGATTCTAGTGTAATACAGT 57.810 33.333 0.00 5.99 35.61 3.55
2808 5609 9.981114 AACCAAAACAAACCTAGAAATCATTAG 57.019 29.630 0.00 0.00 0.00 1.73
2809 5610 9.362151 ACCAAAACAAACCTAGAAATCATTAGA 57.638 29.630 0.00 0.00 0.00 2.10
2810 5611 9.626045 CCAAAACAAACCTAGAAATCATTAGAC 57.374 33.333 0.00 0.00 0.00 2.59
2811 5612 9.626045 CAAAACAAACCTAGAAATCATTAGACC 57.374 33.333 0.00 0.00 0.00 3.85
2812 5613 7.939784 AACAAACCTAGAAATCATTAGACCC 57.060 36.000 0.00 0.00 0.00 4.46
2829 5651 1.414181 ACCCCATCATGAAGAGTAGCG 59.586 52.381 0.00 0.00 0.00 4.26
2832 5654 2.546795 CCCATCATGAAGAGTAGCGGTC 60.547 54.545 0.00 0.00 0.00 4.79
2847 5669 2.549754 AGCGGTCAAACTCACATTTCAG 59.450 45.455 0.00 0.00 0.00 3.02
2879 5701 2.012673 CACAGGATGCAAGCTAGGTTC 58.987 52.381 3.68 0.99 42.53 3.62
2908 5730 8.667592 AAGAACAGGAATATATAGTACTCCCC 57.332 38.462 0.00 0.00 0.00 4.81
2909 5731 7.190501 AGAACAGGAATATATAGTACTCCCCC 58.809 42.308 0.00 0.00 0.00 5.40
2910 5732 6.754753 ACAGGAATATATAGTACTCCCCCT 57.245 41.667 0.00 0.00 0.00 4.79
2911 5733 6.503944 ACAGGAATATATAGTACTCCCCCTG 58.496 44.000 0.00 10.16 42.14 4.45
2912 5734 6.048080 ACAGGAATATATAGTACTCCCCCTGT 59.952 42.308 17.04 17.04 43.88 4.00
2913 5735 7.243381 ACAGGAATATATAGTACTCCCCCTGTA 59.757 40.741 19.39 0.00 45.95 2.74
2916 5738 8.756927 GGAATATATAGTACTCCCCCTGTAAAC 58.243 40.741 0.00 0.00 0.00 2.01
2917 5739 9.544579 GAATATATAGTACTCCCCCTGTAAACT 57.455 37.037 0.00 0.00 0.00 2.66
2926 5748 9.372189 GTACTCCCCCTGTAAACTAATATAAGA 57.628 37.037 0.00 0.00 0.00 2.10
2927 5749 8.493787 ACTCCCCCTGTAAACTAATATAAGAG 57.506 38.462 0.00 0.00 0.00 2.85
2929 5751 8.258850 TCCCCCTGTAAACTAATATAAGAGTG 57.741 38.462 0.00 0.00 0.00 3.51
2930 5752 7.847848 TCCCCCTGTAAACTAATATAAGAGTGT 59.152 37.037 0.00 0.00 0.00 3.55
2931 5753 8.491958 CCCCCTGTAAACTAATATAAGAGTGTT 58.508 37.037 0.00 0.00 0.00 3.32
2932 5754 9.901172 CCCCTGTAAACTAATATAAGAGTGTTT 57.099 33.333 0.00 0.00 0.00 2.83
2960 5782 9.420551 GATCACTAAATATTAGTTTACGGAGGG 57.579 37.037 0.15 0.00 0.00 4.30
2961 5783 8.537728 TCACTAAATATTAGTTTACGGAGGGA 57.462 34.615 0.15 0.00 0.00 4.20
2962 5784 8.636213 TCACTAAATATTAGTTTACGGAGGGAG 58.364 37.037 0.15 0.00 0.00 4.30
2963 5785 8.419442 CACTAAATATTAGTTTACGGAGGGAGT 58.581 37.037 0.15 0.00 0.00 3.85
2964 5786 9.646522 ACTAAATATTAGTTTACGGAGGGAGTA 57.353 33.333 0.00 0.00 0.00 2.59
2965 5787 9.905171 CTAAATATTAGTTTACGGAGGGAGTAC 57.095 37.037 0.00 0.00 0.00 2.73
2966 5788 8.544687 AAATATTAGTTTACGGAGGGAGTACT 57.455 34.615 0.00 0.00 0.00 2.73
2967 5789 8.544687 AATATTAGTTTACGGAGGGAGTACTT 57.455 34.615 0.00 0.00 0.00 2.24
2968 5790 5.904362 TTAGTTTACGGAGGGAGTACTTC 57.096 43.478 0.00 0.00 0.00 3.01
2969 5791 3.771216 AGTTTACGGAGGGAGTACTTCA 58.229 45.455 2.92 0.00 0.00 3.02
2970 5792 4.351127 AGTTTACGGAGGGAGTACTTCAT 58.649 43.478 2.92 0.00 0.00 2.57
2971 5793 5.513233 AGTTTACGGAGGGAGTACTTCATA 58.487 41.667 2.92 0.00 0.00 2.15
2972 5794 5.593502 AGTTTACGGAGGGAGTACTTCATAG 59.406 44.000 2.92 0.00 0.00 2.23
2973 5795 2.308690 ACGGAGGGAGTACTTCATAGC 58.691 52.381 2.92 0.00 0.00 2.97
2974 5796 2.307768 CGGAGGGAGTACTTCATAGCA 58.692 52.381 2.92 0.00 0.00 3.49
2977 5799 4.382685 CGGAGGGAGTACTTCATAGCAAAA 60.383 45.833 2.92 0.00 0.00 2.44
3014 5836 4.171005 TCTAACGACGCAAATACCTGAAG 58.829 43.478 0.00 0.00 0.00 3.02
3039 5868 9.788960 AGATATTCTTCCGCTTTTAAATGAAAC 57.211 29.630 5.33 0.00 0.00 2.78
3084 5914 2.740981 CGCCCAAGATCATCTATCAAGC 59.259 50.000 0.00 0.00 37.03 4.01
3092 5922 4.344390 AGATCATCTATCAAGCAGCAGTGA 59.656 41.667 0.00 0.00 37.03 3.41
3102 5932 1.580845 GCAGCAGTGACCACACCATC 61.581 60.000 0.00 0.00 46.99 3.51
3107 5937 0.322816 AGTGACCACACCATCATGCC 60.323 55.000 2.78 0.00 46.99 4.40
3128 5959 2.401583 TCATGTGGACCTGTATGTGC 57.598 50.000 0.00 0.00 0.00 4.57
3186 6017 1.501654 GGTGCTTCCTTTCCCCCTCT 61.502 60.000 0.00 0.00 0.00 3.69
3319 6280 6.165659 TGCTCTTATCTTTTCTACAAACGC 57.834 37.500 0.00 0.00 0.00 4.84
3331 6292 0.524604 ACAAACGCTGCAAACCGTTC 60.525 50.000 16.46 0.00 45.75 3.95
3362 6323 1.448985 GTGCAATTGAGCCCGTAGAA 58.551 50.000 10.34 0.00 0.00 2.10
3363 6324 1.810151 GTGCAATTGAGCCCGTAGAAA 59.190 47.619 10.34 0.00 0.00 2.52
3365 6326 2.084546 GCAATTGAGCCCGTAGAAAGT 58.915 47.619 10.34 0.00 0.00 2.66
3373 6337 5.310451 TGAGCCCGTAGAAAGTTTACAATT 58.690 37.500 0.00 0.00 0.00 2.32
4097 8429 1.030457 AACTTCAGTCGAGTGACCGT 58.970 50.000 22.39 18.22 46.74 4.83
4105 8437 1.213013 CGAGTGACCGTTCTCCTGG 59.787 63.158 0.00 0.00 0.00 4.45
4106 8438 1.241990 CGAGTGACCGTTCTCCTGGA 61.242 60.000 0.00 0.00 0.00 3.86
4107 8439 1.187087 GAGTGACCGTTCTCCTGGAT 58.813 55.000 0.00 0.00 0.00 3.41
4108 8440 0.898320 AGTGACCGTTCTCCTGGATG 59.102 55.000 0.00 0.00 0.00 3.51
4260 8802 2.090524 CGTCCTCAACGCCGGTTAC 61.091 63.158 1.90 0.00 45.76 2.50
4261 8803 1.005867 GTCCTCAACGCCGGTTACA 60.006 57.895 1.90 0.00 33.72 2.41
4262 8804 1.012486 GTCCTCAACGCCGGTTACAG 61.012 60.000 1.90 0.00 33.72 2.74
4263 8805 1.180456 TCCTCAACGCCGGTTACAGA 61.180 55.000 1.90 0.00 33.72 3.41
4264 8806 1.012486 CCTCAACGCCGGTTACAGAC 61.012 60.000 1.90 0.00 33.72 3.51
4265 8807 0.319211 CTCAACGCCGGTTACAGACA 60.319 55.000 1.90 0.00 33.72 3.41
4266 8808 0.598158 TCAACGCCGGTTACAGACAC 60.598 55.000 1.90 0.00 33.72 3.67
4267 8809 1.662446 AACGCCGGTTACAGACACG 60.662 57.895 1.90 0.00 33.72 4.49
4268 8810 3.475774 CGCCGGTTACAGACACGC 61.476 66.667 1.90 0.00 0.00 5.34
4269 8811 3.116531 GCCGGTTACAGACACGCC 61.117 66.667 1.90 0.00 0.00 5.68
4270 8812 2.807895 CCGGTTACAGACACGCCG 60.808 66.667 0.00 0.00 41.82 6.46
4271 8813 3.475774 CGGTTACAGACACGCCGC 61.476 66.667 0.00 0.00 35.90 6.53
4272 8814 3.475774 GGTTACAGACACGCCGCG 61.476 66.667 12.14 12.14 0.00 6.46
4273 8815 4.130281 GTTACAGACACGCCGCGC 62.130 66.667 13.88 0.00 0.00 6.86
4285 8827 2.126228 CCGCGCGTCTCCTTTGTA 60.126 61.111 29.95 0.00 0.00 2.41
4286 8828 1.518572 CCGCGCGTCTCCTTTGTAT 60.519 57.895 29.95 0.00 0.00 2.29
4287 8829 1.480219 CCGCGCGTCTCCTTTGTATC 61.480 60.000 29.95 0.00 0.00 2.24
4288 8830 1.480219 CGCGCGTCTCCTTTGTATCC 61.480 60.000 24.19 0.00 0.00 2.59
4289 8831 1.480219 GCGCGTCTCCTTTGTATCCG 61.480 60.000 8.43 0.00 0.00 4.18
4290 8832 0.179145 CGCGTCTCCTTTGTATCCGT 60.179 55.000 0.00 0.00 0.00 4.69
4291 8833 1.734707 CGCGTCTCCTTTGTATCCGTT 60.735 52.381 0.00 0.00 0.00 4.44
4292 8834 1.925185 GCGTCTCCTTTGTATCCGTTC 59.075 52.381 0.00 0.00 0.00 3.95
4293 8835 2.537401 CGTCTCCTTTGTATCCGTTCC 58.463 52.381 0.00 0.00 0.00 3.62
4294 8836 2.537401 GTCTCCTTTGTATCCGTTCCG 58.463 52.381 0.00 0.00 0.00 4.30
4304 8846 2.819595 CCGTTCCGGCCTCACATG 60.820 66.667 0.00 0.00 41.17 3.21
4305 8847 2.047274 CGTTCCGGCCTCACATGT 60.047 61.111 0.00 0.00 0.00 3.21
4306 8848 2.100631 CGTTCCGGCCTCACATGTC 61.101 63.158 0.00 0.00 0.00 3.06
4307 8849 2.100631 GTTCCGGCCTCACATGTCG 61.101 63.158 0.00 0.00 0.00 4.35
4308 8850 3.309436 TTCCGGCCTCACATGTCGG 62.309 63.158 14.92 14.92 41.80 4.79
4310 8852 4.457496 CGGCCTCACATGTCGGCT 62.457 66.667 26.38 0.00 43.29 5.52
4311 8853 2.821366 GGCCTCACATGTCGGCTG 60.821 66.667 26.38 4.99 43.29 4.85
4312 8854 2.265739 GCCTCACATGTCGGCTGA 59.734 61.111 22.47 5.75 40.62 4.26
4313 8855 2.103042 GCCTCACATGTCGGCTGAC 61.103 63.158 22.47 19.20 45.71 3.51
4314 8856 1.448540 CCTCACATGTCGGCTGACC 60.449 63.158 22.81 5.74 44.86 4.02
4315 8857 1.293179 CTCACATGTCGGCTGACCA 59.707 57.895 22.81 11.31 44.86 4.02
4316 8858 0.320683 CTCACATGTCGGCTGACCAA 60.321 55.000 22.81 5.65 44.86 3.67
4317 8859 0.602638 TCACATGTCGGCTGACCAAC 60.603 55.000 22.81 0.00 44.86 3.77
4318 8860 1.302511 ACATGTCGGCTGACCAACC 60.303 57.895 22.81 0.00 44.86 3.77
4319 8861 1.302431 CATGTCGGCTGACCAACCA 60.302 57.895 22.81 4.13 44.86 3.67
4320 8862 0.677731 CATGTCGGCTGACCAACCAT 60.678 55.000 22.81 6.49 44.86 3.55
4321 8863 0.392998 ATGTCGGCTGACCAACCATC 60.393 55.000 22.81 0.00 44.86 3.51
4322 8864 1.003839 GTCGGCTGACCAACCATCA 60.004 57.895 15.20 0.00 39.30 3.07
4323 8865 1.003839 TCGGCTGACCAACCATCAC 60.004 57.895 0.00 0.00 34.57 3.06
4324 8866 1.302431 CGGCTGACCAACCATCACA 60.302 57.895 0.00 0.00 34.57 3.58
4325 8867 1.577328 CGGCTGACCAACCATCACAC 61.577 60.000 0.00 0.00 34.57 3.82
4326 8868 1.577328 GGCTGACCAACCATCACACG 61.577 60.000 0.00 0.00 35.26 4.49
4327 8869 1.868997 CTGACCAACCATCACACGC 59.131 57.895 0.00 0.00 0.00 5.34
4328 8870 1.900585 CTGACCAACCATCACACGCG 61.901 60.000 3.53 3.53 0.00 6.01
4329 8871 2.668212 ACCAACCATCACACGCGG 60.668 61.111 12.47 1.27 0.00 6.46
4330 8872 2.668212 CCAACCATCACACGCGGT 60.668 61.111 12.47 2.05 33.32 5.68
4331 8873 2.677003 CCAACCATCACACGCGGTC 61.677 63.158 12.47 0.00 30.91 4.79
4332 8874 1.958715 CAACCATCACACGCGGTCA 60.959 57.895 12.47 0.00 30.91 4.02
4333 8875 1.003839 AACCATCACACGCGGTCAT 60.004 52.632 12.47 0.00 30.91 3.06
4334 8876 0.248012 AACCATCACACGCGGTCATA 59.752 50.000 12.47 0.00 30.91 2.15
4335 8877 0.464036 ACCATCACACGCGGTCATAT 59.536 50.000 12.47 0.00 0.00 1.78
4336 8878 1.134521 ACCATCACACGCGGTCATATT 60.135 47.619 12.47 0.00 0.00 1.28
4337 8879 1.939934 CCATCACACGCGGTCATATTT 59.060 47.619 12.47 0.00 0.00 1.40
4338 8880 3.127589 CCATCACACGCGGTCATATTTA 58.872 45.455 12.47 0.00 0.00 1.40
4339 8881 3.745975 CCATCACACGCGGTCATATTTAT 59.254 43.478 12.47 0.00 0.00 1.40
4340 8882 4.213270 CCATCACACGCGGTCATATTTATT 59.787 41.667 12.47 0.00 0.00 1.40
4341 8883 4.787381 TCACACGCGGTCATATTTATTG 57.213 40.909 12.47 0.00 0.00 1.90
4342 8884 3.001838 TCACACGCGGTCATATTTATTGC 59.998 43.478 12.47 0.00 0.00 3.56
4620 9162 1.153168 TAGCGCCATGGCCTTCTTC 60.153 57.895 30.79 12.56 37.98 2.87
4628 9170 3.130160 GGCCTTCTTCAGCGGCAG 61.130 66.667 1.45 0.00 45.53 4.85
4629 9171 2.359230 GCCTTCTTCAGCGGCAGT 60.359 61.111 1.45 0.00 43.25 4.40
4651 9193 0.107703 CAATAGCAAGCTCACCCCGA 60.108 55.000 0.00 0.00 0.00 5.14
4652 9194 0.107654 AATAGCAAGCTCACCCCGAC 60.108 55.000 0.00 0.00 0.00 4.79
4702 9244 4.803426 GTCGTGAGGGAGCGGCTG 62.803 72.222 7.50 0.00 0.00 4.85
4741 9283 0.955428 CACGTTGGCACTGGCAGTAT 60.955 55.000 21.59 0.00 43.71 2.12
4791 9333 4.664677 GCCGCACGACTGTCACCT 62.665 66.667 8.73 0.00 0.00 4.00
4793 9335 2.734723 CGCACGACTGTCACCTGG 60.735 66.667 8.73 0.00 0.00 4.45
4794 9336 2.734591 GCACGACTGTCACCTGGA 59.265 61.111 8.73 0.00 0.00 3.86
4825 9367 1.078497 CCCGATGCTAACTGTGCCA 60.078 57.895 0.00 0.00 0.00 4.92
4832 9374 1.006571 CTAACTGTGCCACGGTCGT 60.007 57.895 10.26 0.00 36.53 4.34
4833 9375 1.282248 CTAACTGTGCCACGGTCGTG 61.282 60.000 10.26 15.62 45.02 4.35
4836 9378 4.934942 TGTGCCACGGTCGTGTCG 62.935 66.667 19.94 8.66 44.02 4.35
4863 9405 2.408022 CGAGGAGGTACGAAGGCG 59.592 66.667 0.00 0.00 44.79 5.52
4870 9412 1.153429 GGTACGAAGGCGCTTGGAT 60.153 57.895 7.64 0.00 42.48 3.41
4877 9419 2.203126 GGCGCTTGGATCTCCTGG 60.203 66.667 7.64 0.00 36.82 4.45
4878 9420 2.899339 GCGCTTGGATCTCCTGGC 60.899 66.667 0.00 1.53 36.82 4.85
4907 9449 1.395826 GCCTATGTGCCGGACTCTCT 61.396 60.000 5.05 0.00 0.00 3.10
4914 9456 1.066858 GTGCCGGACTCTCTTGATTGA 60.067 52.381 5.05 0.00 0.00 2.57
4928 9470 4.103153 TCTTGATTGAGAGGTCTGGTTTGT 59.897 41.667 0.00 0.00 0.00 2.83
4929 9471 4.437682 TGATTGAGAGGTCTGGTTTGTT 57.562 40.909 0.00 0.00 0.00 2.83
4955 9497 1.657538 GCACGAAGAGCAACTTTGTCG 60.658 52.381 11.81 7.46 46.72 4.35
4960 9502 1.082756 GAGCAACTTTGTCGTGGCG 60.083 57.895 0.00 0.00 38.87 5.69
4976 9518 1.896660 GCGTCCAACACCACCACAT 60.897 57.895 0.00 0.00 0.00 3.21
5013 9555 2.656069 GGCCCTAGTCGTCAAGCCA 61.656 63.158 0.00 0.00 40.20 4.75
5023 9565 0.179089 CGTCAAGCCAGATGAGGAGG 60.179 60.000 0.00 0.00 35.30 4.30
5027 9569 1.413445 CAAGCCAGATGAGGAGGAGAG 59.587 57.143 0.00 0.00 0.00 3.20
5030 9572 0.264359 CCAGATGAGGAGGAGAGGGT 59.736 60.000 0.00 0.00 0.00 4.34
5037 9579 0.644937 AGGAGGAGAGGGTTGCCTAT 59.355 55.000 0.00 0.00 30.70 2.57
5075 9617 1.917495 CCCATGCAGACCTCCATCA 59.083 57.895 0.00 0.00 0.00 3.07
5087 9629 2.190578 CCATCAAGGAGACCCGGC 59.809 66.667 0.00 0.00 41.22 6.13
5101 9644 2.756283 CGGCGAAGGAGGAGGAGT 60.756 66.667 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.435120 AAACCCCGTCACCATTCCCC 62.435 60.000 0.00 0.00 0.00 4.81
69 70 2.710902 GGCGAAGGAATTGGGCCAC 61.711 63.158 5.23 0.00 43.23 5.01
160 161 2.125552 CAGGCTCGGACGATGCAA 60.126 61.111 14.56 0.00 0.00 4.08
168 169 1.338107 TTCTCTCAAACAGGCTCGGA 58.662 50.000 0.00 0.00 0.00 4.55
174 175 3.160269 AGGCCATTTTCTCTCAAACAGG 58.840 45.455 5.01 0.00 0.00 4.00
195 196 1.002201 TCTGTTTGGAACGGCCGAATA 59.998 47.619 35.90 12.65 42.07 1.75
201 202 0.804989 CCAGATCTGTTTGGAACGGC 59.195 55.000 21.11 0.00 37.69 5.68
209 210 2.423947 GCATCCCCATCCAGATCTGTTT 60.424 50.000 21.11 5.44 0.00 2.83
211 212 0.769873 GCATCCCCATCCAGATCTGT 59.230 55.000 21.11 0.60 0.00 3.41
215 216 3.723681 TCTTAAAGCATCCCCATCCAGAT 59.276 43.478 0.00 0.00 0.00 2.90
217 218 3.582998 TCTTAAAGCATCCCCATCCAG 57.417 47.619 0.00 0.00 0.00 3.86
221 222 3.885297 CACGAATCTTAAAGCATCCCCAT 59.115 43.478 0.00 0.00 0.00 4.00
247 248 4.381566 GTGTTTACTGGTATTTGCTTTGCG 59.618 41.667 0.00 0.00 0.00 4.85
251 252 5.243730 AGCATGTGTTTACTGGTATTTGCTT 59.756 36.000 0.00 0.00 33.23 3.91
260 261 5.238432 TGTTTGAGTAGCATGTGTTTACTGG 59.762 40.000 0.00 0.00 0.00 4.00
261 262 6.299023 TGTTTGAGTAGCATGTGTTTACTG 57.701 37.500 0.00 0.00 0.00 2.74
262 263 6.902341 CATGTTTGAGTAGCATGTGTTTACT 58.098 36.000 0.00 0.00 36.28 2.24
289 290 5.676532 TCACGACCGTTCAATGTAAATTT 57.323 34.783 0.00 0.00 0.00 1.82
331 332 4.999939 CCCCAAGCACGCGTTTGC 63.000 66.667 10.22 12.11 43.34 3.68
466 467 1.135373 ACTTGAGAGTGATACGGTGCG 60.135 52.381 0.00 0.00 33.99 5.34
493 494 3.459063 GACTCGGGGGAGAACGGG 61.459 72.222 0.00 0.00 36.47 5.28
520 521 0.886490 GCAGGGGTGATAATCTGCCG 60.886 60.000 0.00 0.00 44.70 5.69
689 690 2.101082 TGGCACTTGAACGTGTACACTA 59.899 45.455 23.01 4.91 37.24 2.74
810 811 0.461339 GAGAGACTCGCTCCTCTCGT 60.461 60.000 10.46 0.00 43.84 4.18
811 812 2.307363 GAGAGACTCGCTCCTCTCG 58.693 63.158 10.46 0.00 43.84 4.04
813 814 4.977393 GGAGAGACTCGCTCCTCT 57.023 61.111 18.92 0.00 44.99 3.69
882 896 4.828296 TCCCGAGGCCCCGTAGTC 62.828 72.222 5.74 0.00 0.00 2.59
883 897 4.835891 CTCCCGAGGCCCCGTAGT 62.836 72.222 5.74 0.00 0.00 2.73
922 937 2.154462 GTGGTGACAAATCTGGAGTGG 58.846 52.381 0.00 0.00 46.06 4.00
927 942 0.888736 TGGCGTGGTGACAAATCTGG 60.889 55.000 0.00 0.00 46.06 3.86
977 992 3.181471 GGATATGTGGTCAGAGTGTCAGG 60.181 52.174 0.00 0.00 0.00 3.86
1039 1072 0.973496 AAGACGAAGAGAGGAGGGGC 60.973 60.000 0.00 0.00 0.00 5.80
1098 1142 3.371063 ACCGCCGCGAGAAGAAGA 61.371 61.111 15.93 0.00 0.00 2.87
1274 1330 2.032550 CCAAGAACATGAAGCATAGCGG 59.967 50.000 0.00 0.00 0.00 5.52
1279 1335 4.142227 GCAAGATCCAAGAACATGAAGCAT 60.142 41.667 0.00 0.00 0.00 3.79
1282 1338 3.686241 TCGCAAGATCCAAGAACATGAAG 59.314 43.478 0.00 0.00 45.01 3.02
1315 1371 0.106519 AATTCCTTCCTGATGGCGGG 60.107 55.000 0.00 0.00 42.30 6.13
1324 1380 1.064832 GCTCAGGCAGAATTCCTTCCT 60.065 52.381 0.65 3.45 39.19 3.36
1325 1381 1.064832 AGCTCAGGCAGAATTCCTTCC 60.065 52.381 0.65 0.99 41.70 3.46
1326 1382 2.416680 AGCTCAGGCAGAATTCCTTC 57.583 50.000 0.65 0.00 41.70 3.46
1327 1383 2.895242 AAGCTCAGGCAGAATTCCTT 57.105 45.000 0.65 0.00 41.70 3.36
1353 1409 2.716424 ACCCAAATTCCCTGACAGAGAA 59.284 45.455 3.32 2.34 0.00 2.87
1374 1430 3.008923 TGTCATAGCCAAGGACAACATCA 59.991 43.478 2.02 0.00 38.50 3.07
1403 1459 7.861630 AGTGTGTGAACTTACAACATATTCAC 58.138 34.615 8.17 8.17 46.02 3.18
1434 1490 5.983333 AGAGTGGGTTTATGGATGAGAAT 57.017 39.130 0.00 0.00 0.00 2.40
1463 1519 8.044060 TGCCAAAACTGAAGAATACTAATCAG 57.956 34.615 0.00 0.00 43.79 2.90
1470 1526 5.904362 AGGATGCCAAAACTGAAGAATAC 57.096 39.130 0.00 0.00 0.00 1.89
1485 1602 4.899352 ATCTACACCAATCTAGGATGCC 57.101 45.455 0.00 0.00 0.00 4.40
1499 1616 5.003214 CGTTACGCTGTTCTACAATCTACAC 59.997 44.000 0.00 0.00 0.00 2.90
1650 1835 0.040958 GCAATATTGAAGCCGGCGAG 60.041 55.000 23.20 5.30 0.00 5.03
1663 1848 8.519526 TGTCTGGAAAATTTTAACTCGCAATAT 58.480 29.630 2.75 0.00 0.00 1.28
1667 1852 5.759506 TGTCTGGAAAATTTTAACTCGCA 57.240 34.783 2.75 0.00 0.00 5.10
1668 1853 5.629435 CCTTGTCTGGAAAATTTTAACTCGC 59.371 40.000 2.75 0.00 0.00 5.03
1692 1877 2.158871 TGTGTCTTAACAGGTGGACCAC 60.159 50.000 16.86 16.86 35.64 4.16
1700 1885 2.900546 AGAGGGAGTGTGTCTTAACAGG 59.099 50.000 0.00 0.00 35.64 4.00
1734 1919 2.846827 CTCCCTCCCAAATAAGTGACCT 59.153 50.000 0.00 0.00 0.00 3.85
1753 1938 4.876679 GCTGATTGTTTTCTAGTACCCCTC 59.123 45.833 0.00 0.00 0.00 4.30
1774 1959 4.549458 GATTGCAACATAGTTTGTGTGCT 58.451 39.130 0.00 3.95 40.23 4.40
1783 1969 0.726827 CGTGGCGATTGCAACATAGT 59.273 50.000 13.09 0.00 45.98 2.12
1784 1970 0.589729 GCGTGGCGATTGCAACATAG 60.590 55.000 13.09 0.00 45.98 2.23
1862 2053 4.505808 CTCATAGAATGGCATCCAGCTAG 58.494 47.826 0.00 0.00 44.79 3.42
1972 2163 5.373812 AGTGGAGGATAAGTTAATGGTGG 57.626 43.478 0.00 0.00 0.00 4.61
2000 4719 9.154847 CAAAAGAAACTTGATGGAAGAAAACTT 57.845 29.630 0.00 0.00 35.42 2.66
2001 4720 7.765819 CCAAAAGAAACTTGATGGAAGAAAACT 59.234 33.333 9.50 0.00 35.42 2.66
2002 4721 7.011389 CCCAAAAGAAACTTGATGGAAGAAAAC 59.989 37.037 14.12 0.00 35.42 2.43
2005 4724 5.070313 CCCCAAAAGAAACTTGATGGAAGAA 59.930 40.000 14.12 0.00 35.42 2.52
2007 4726 4.588528 TCCCCAAAAGAAACTTGATGGAAG 59.411 41.667 14.12 8.18 37.73 3.46
2011 4739 4.039609 AGCTTCCCCAAAAGAAACTTGATG 59.960 41.667 0.00 0.00 0.00 3.07
2077 4805 4.394439 TGGGGTAACTTTTTCAACAAGC 57.606 40.909 0.00 0.00 0.00 4.01
2078 4806 5.304357 AGGATGGGGTAACTTTTTCAACAAG 59.696 40.000 0.00 0.00 0.00 3.16
2113 4855 7.389330 TCATTCTCTGATTGCATGCAAAATTTT 59.611 29.630 34.84 19.63 39.55 1.82
2118 4860 4.218852 TGTCATTCTCTGATTGCATGCAAA 59.781 37.500 34.84 19.79 39.55 3.68
2160 4932 7.776933 TTGAGTTTGAGGAGATAATTCGATG 57.223 36.000 0.00 0.00 0.00 3.84
2162 4934 7.280876 CCATTTGAGTTTGAGGAGATAATTCGA 59.719 37.037 0.00 0.00 0.00 3.71
2164 4936 8.286191 ACCATTTGAGTTTGAGGAGATAATTC 57.714 34.615 0.00 0.00 0.00 2.17
2186 4958 8.254508 AGTCAAGCAAAGTGTTAAAATTTACCA 58.745 29.630 0.00 0.00 0.00 3.25
2194 4966 5.652994 AACCAGTCAAGCAAAGTGTTAAA 57.347 34.783 0.00 0.00 0.00 1.52
2202 4974 3.181501 CGTCAGAAAACCAGTCAAGCAAA 60.182 43.478 0.00 0.00 0.00 3.68
2368 5149 9.579768 CATAGATATCTAAACTGTGGAGCATAC 57.420 37.037 16.27 0.00 31.39 2.39
2396 5177 5.316167 ACCATGAGTTTGCTTCACAGATTA 58.684 37.500 0.00 0.00 0.00 1.75
2398 5179 3.759581 ACCATGAGTTTGCTTCACAGAT 58.240 40.909 0.00 0.00 0.00 2.90
2407 5188 9.489084 TGTCTGTATATATTACCATGAGTTTGC 57.511 33.333 0.00 0.00 0.00 3.68
2486 5270 5.210430 TCCTTCACCGTCCATATAACCTTA 58.790 41.667 0.00 0.00 0.00 2.69
2489 5273 4.411256 TTCCTTCACCGTCCATATAACC 57.589 45.455 0.00 0.00 0.00 2.85
2608 5392 9.624697 CGATATTTGAAGATCAGGAAAACAAAA 57.375 29.630 0.00 0.00 31.45 2.44
2645 5429 8.846943 TTTCTTCAGATTTGCTCAATAGTACA 57.153 30.769 0.00 0.00 0.00 2.90
2654 5446 6.506500 TCCAGATTTTCTTCAGATTTGCTC 57.493 37.500 0.00 0.00 0.00 4.26
2725 5517 6.855836 TGTTTCAGCTCTTAAATTGCCATAG 58.144 36.000 0.00 0.00 0.00 2.23
2726 5518 6.832520 TGTTTCAGCTCTTAAATTGCCATA 57.167 33.333 0.00 0.00 0.00 2.74
2773 5565 9.715121 TCTAGGTTTGTTTTGGTTATACTACTG 57.285 33.333 0.00 0.00 0.00 2.74
2801 5602 5.610132 ACTCTTCATGATGGGGTCTAATGAT 59.390 40.000 12.72 0.00 0.00 2.45
2803 5604 5.301835 ACTCTTCATGATGGGGTCTAATG 57.698 43.478 12.72 0.00 0.00 1.90
2804 5605 5.012561 GCTACTCTTCATGATGGGGTCTAAT 59.987 44.000 12.72 0.00 0.00 1.73
2805 5606 4.345257 GCTACTCTTCATGATGGGGTCTAA 59.655 45.833 12.72 0.00 0.00 2.10
2806 5607 3.898123 GCTACTCTTCATGATGGGGTCTA 59.102 47.826 12.72 0.00 0.00 2.59
2808 5609 2.546795 CGCTACTCTTCATGATGGGGTC 60.547 54.545 12.72 1.25 0.00 4.46
2809 5610 1.414181 CGCTACTCTTCATGATGGGGT 59.586 52.381 12.72 9.62 0.00 4.95
2810 5611 1.270518 CCGCTACTCTTCATGATGGGG 60.271 57.143 12.72 4.23 0.00 4.96
2811 5612 1.414181 ACCGCTACTCTTCATGATGGG 59.586 52.381 6.92 6.92 0.00 4.00
2812 5613 2.101415 TGACCGCTACTCTTCATGATGG 59.899 50.000 8.60 0.00 0.00 3.51
2829 5651 6.348868 GGATCTTCTGAAATGTGAGTTTGACC 60.349 42.308 0.00 0.00 0.00 4.02
2832 5654 6.429078 TCTGGATCTTCTGAAATGTGAGTTTG 59.571 38.462 0.00 0.00 0.00 2.93
2847 5669 2.836262 CATCCTGTGCTCTGGATCTTC 58.164 52.381 20.51 0.00 46.06 2.87
2888 5710 6.503944 ACAGGGGGAGTACTATATATTCCTG 58.496 44.000 16.46 16.46 42.47 3.86
2891 5713 9.544579 AGTTTACAGGGGGAGTACTATATATTC 57.455 37.037 0.00 0.00 0.00 1.75
2899 5721 9.377238 CTTATATTAGTTTACAGGGGGAGTACT 57.623 37.037 0.00 0.00 0.00 2.73
2900 5722 9.372189 TCTTATATTAGTTTACAGGGGGAGTAC 57.628 37.037 0.00 0.00 0.00 2.73
2902 5724 8.072480 ACTCTTATATTAGTTTACAGGGGGAGT 58.928 37.037 0.00 0.00 0.00 3.85
2905 5727 8.030913 ACACTCTTATATTAGTTTACAGGGGG 57.969 38.462 0.00 0.00 0.00 5.40
2906 5728 9.901172 AAACACTCTTATATTAGTTTACAGGGG 57.099 33.333 0.00 0.00 0.00 4.79
2934 5756 9.420551 CCCTCCGTAAACTAATATTTAGTGATC 57.579 37.037 0.00 0.00 0.00 2.92
2935 5757 9.151177 TCCCTCCGTAAACTAATATTTAGTGAT 57.849 33.333 0.00 0.00 0.00 3.06
2936 5758 8.537728 TCCCTCCGTAAACTAATATTTAGTGA 57.462 34.615 0.00 0.00 0.00 3.41
2937 5759 8.419442 ACTCCCTCCGTAAACTAATATTTAGTG 58.581 37.037 0.00 0.00 0.00 2.74
2939 5761 9.905171 GTACTCCCTCCGTAAACTAATATTTAG 57.095 37.037 0.00 0.00 0.00 1.85
2940 5762 9.646522 AGTACTCCCTCCGTAAACTAATATTTA 57.353 33.333 0.00 0.00 0.00 1.40
2941 5763 8.544687 AGTACTCCCTCCGTAAACTAATATTT 57.455 34.615 0.00 0.00 0.00 1.40
2942 5764 8.544687 AAGTACTCCCTCCGTAAACTAATATT 57.455 34.615 0.00 0.00 0.00 1.28
2943 5765 7.781693 TGAAGTACTCCCTCCGTAAACTAATAT 59.218 37.037 0.00 0.00 0.00 1.28
2944 5766 7.118723 TGAAGTACTCCCTCCGTAAACTAATA 58.881 38.462 0.00 0.00 0.00 0.98
2945 5767 5.954150 TGAAGTACTCCCTCCGTAAACTAAT 59.046 40.000 0.00 0.00 0.00 1.73
2946 5768 5.324409 TGAAGTACTCCCTCCGTAAACTAA 58.676 41.667 0.00 0.00 0.00 2.24
2947 5769 4.922206 TGAAGTACTCCCTCCGTAAACTA 58.078 43.478 0.00 0.00 0.00 2.24
2948 5770 3.771216 TGAAGTACTCCCTCCGTAAACT 58.229 45.455 0.00 0.00 0.00 2.66
2949 5771 4.732672 ATGAAGTACTCCCTCCGTAAAC 57.267 45.455 0.00 0.00 0.00 2.01
2950 5772 4.340381 GCTATGAAGTACTCCCTCCGTAAA 59.660 45.833 0.00 0.00 0.00 2.01
2951 5773 3.887716 GCTATGAAGTACTCCCTCCGTAA 59.112 47.826 0.00 0.00 0.00 3.18
2953 5775 2.308690 GCTATGAAGTACTCCCTCCGT 58.691 52.381 0.00 0.00 0.00 4.69
2954 5776 2.307768 TGCTATGAAGTACTCCCTCCG 58.692 52.381 0.00 0.00 0.00 4.63
2955 5777 4.755266 TTTGCTATGAAGTACTCCCTCC 57.245 45.455 0.00 0.00 0.00 4.30
2956 5778 7.631717 AAATTTTGCTATGAAGTACTCCCTC 57.368 36.000 0.00 0.00 0.00 4.30
2957 5779 7.830739 CAAAATTTTGCTATGAAGTACTCCCT 58.169 34.615 17.48 0.00 0.00 4.20
3014 5836 9.567848 TGTTTCATTTAAAAGCGGAAGAATATC 57.432 29.630 0.00 0.00 0.00 1.63
3025 5852 6.690957 GGCCAGTTTTTGTTTCATTTAAAAGC 59.309 34.615 0.00 0.00 0.00 3.51
3034 5861 1.407258 CCTCGGCCAGTTTTTGTTTCA 59.593 47.619 2.24 0.00 0.00 2.69
3035 5862 1.868109 GCCTCGGCCAGTTTTTGTTTC 60.868 52.381 2.24 0.00 34.56 2.78
3039 5868 0.103937 TTTGCCTCGGCCAGTTTTTG 59.896 50.000 2.24 0.00 41.09 2.44
3084 5914 0.250424 TGATGGTGTGGTCACTGCTG 60.250 55.000 2.66 0.00 43.41 4.41
3092 5922 0.405198 TGAAGGCATGATGGTGTGGT 59.595 50.000 0.00 0.00 0.00 4.16
3107 5937 2.679837 GCACATACAGGTCCACATGAAG 59.320 50.000 0.00 0.00 0.00 3.02
3128 5959 6.635030 ATCAATCATGTCAAGTGGATGATG 57.365 37.500 0.00 0.00 37.01 3.07
3186 6017 5.359576 ACTGTTGTGTTGGATAGCAAAAAGA 59.640 36.000 0.00 0.00 0.00 2.52
3293 6254 7.059602 GCGTTTGTAGAAAAGATAAGAGCAAAC 59.940 37.037 2.48 0.00 39.47 2.93
3297 6258 6.244275 CAGCGTTTGTAGAAAAGATAAGAGC 58.756 40.000 2.48 0.00 0.00 4.09
3301 6262 5.933187 TGCAGCGTTTGTAGAAAAGATAA 57.067 34.783 2.48 0.00 0.00 1.75
3303 6264 4.829064 TTGCAGCGTTTGTAGAAAAGAT 57.171 36.364 2.48 0.00 0.00 2.40
3319 6280 2.712539 TGCACGAACGGTTTGCAG 59.287 55.556 14.44 6.49 41.29 4.41
3354 6315 7.645402 AGACAAAATTGTAAACTTTCTACGGG 58.355 34.615 0.00 0.00 42.43 5.28
3363 6324 9.520204 CAATTCACAGAGACAAAATTGTAAACT 57.480 29.630 0.00 0.00 42.43 2.66
3365 6326 7.978414 TGCAATTCACAGAGACAAAATTGTAAA 59.022 29.630 0.00 0.00 42.43 2.01
3373 6337 2.886523 CCCTGCAATTCACAGAGACAAA 59.113 45.455 6.58 0.00 37.32 2.83
4097 8429 3.242867 AGAGTCACAACATCCAGGAGAA 58.757 45.455 0.00 0.00 0.00 2.87
4105 8437 4.552767 CGACACCAAAAGAGTCACAACATC 60.553 45.833 0.00 0.00 35.98 3.06
4106 8438 3.312421 CGACACCAAAAGAGTCACAACAT 59.688 43.478 0.00 0.00 35.98 2.71
4107 8439 2.675844 CGACACCAAAAGAGTCACAACA 59.324 45.455 0.00 0.00 35.98 3.33
4108 8440 2.031683 CCGACACCAAAAGAGTCACAAC 59.968 50.000 0.00 0.00 35.98 3.32
4171 8503 8.250332 ACTTTCAGTTTTCAGTGCAAAAATAGA 58.750 29.630 0.00 0.00 0.00 1.98
4268 8810 1.480219 GATACAAAGGAGACGCGCGG 61.480 60.000 35.22 15.89 0.00 6.46
4269 8811 1.480219 GGATACAAAGGAGACGCGCG 61.480 60.000 30.96 30.96 0.00 6.86
4270 8812 1.480219 CGGATACAAAGGAGACGCGC 61.480 60.000 5.73 0.00 0.00 6.86
4271 8813 0.179145 ACGGATACAAAGGAGACGCG 60.179 55.000 3.53 3.53 0.00 6.01
4272 8814 1.925185 GAACGGATACAAAGGAGACGC 59.075 52.381 0.00 0.00 0.00 5.19
4273 8815 2.537401 GGAACGGATACAAAGGAGACG 58.463 52.381 0.00 0.00 0.00 4.18
4289 8831 2.100631 CGACATGTGAGGCCGGAAC 61.101 63.158 5.05 0.00 0.00 3.62
4290 8832 2.264480 CGACATGTGAGGCCGGAA 59.736 61.111 5.05 0.00 0.00 4.30
4291 8833 3.770040 CCGACATGTGAGGCCGGA 61.770 66.667 15.79 0.00 42.49 5.14
4296 8838 1.448540 GGTCAGCCGACATGTGAGG 60.449 63.158 1.15 7.93 44.54 3.86
4297 8839 0.320683 TTGGTCAGCCGACATGTGAG 60.321 55.000 1.15 0.00 44.54 3.51
4298 8840 0.602638 GTTGGTCAGCCGACATGTGA 60.603 55.000 1.15 0.00 46.31 3.58
4299 8841 1.868997 GTTGGTCAGCCGACATGTG 59.131 57.895 1.15 0.00 46.31 3.21
4300 8842 4.379174 GTTGGTCAGCCGACATGT 57.621 55.556 0.00 0.00 46.31 3.21
4304 8846 1.003839 TGATGGTTGGTCAGCCGAC 60.004 57.895 0.00 0.00 46.33 4.79
4305 8847 1.003839 GTGATGGTTGGTCAGCCGA 60.004 57.895 0.00 0.00 37.67 5.54
4306 8848 1.302431 TGTGATGGTTGGTCAGCCG 60.302 57.895 0.00 0.00 37.67 5.52
4307 8849 1.577328 CGTGTGATGGTTGGTCAGCC 61.577 60.000 0.00 0.00 0.00 4.85
4308 8850 1.868997 CGTGTGATGGTTGGTCAGC 59.131 57.895 0.00 0.00 0.00 4.26
4309 8851 1.868997 GCGTGTGATGGTTGGTCAG 59.131 57.895 0.00 0.00 0.00 3.51
4310 8852 1.958715 CGCGTGTGATGGTTGGTCA 60.959 57.895 0.00 0.00 0.00 4.02
4311 8853 2.677003 CCGCGTGTGATGGTTGGTC 61.677 63.158 4.92 0.00 0.00 4.02
4312 8854 2.668212 CCGCGTGTGATGGTTGGT 60.668 61.111 4.92 0.00 0.00 3.67
4313 8855 2.668212 ACCGCGTGTGATGGTTGG 60.668 61.111 4.92 0.00 29.87 3.77
4314 8856 1.298157 ATGACCGCGTGTGATGGTTG 61.298 55.000 4.92 0.00 35.75 3.77
4315 8857 0.248012 TATGACCGCGTGTGATGGTT 59.752 50.000 4.92 0.00 35.75 3.67
4316 8858 0.464036 ATATGACCGCGTGTGATGGT 59.536 50.000 4.92 0.00 39.12 3.55
4317 8859 1.581934 AATATGACCGCGTGTGATGG 58.418 50.000 4.92 0.00 0.00 3.51
4318 8860 4.990543 ATAAATATGACCGCGTGTGATG 57.009 40.909 4.92 0.00 0.00 3.07
4319 8861 4.319477 GCAATAAATATGACCGCGTGTGAT 60.319 41.667 4.92 5.12 0.00 3.06
4320 8862 3.001838 GCAATAAATATGACCGCGTGTGA 59.998 43.478 4.92 0.00 0.00 3.58
4321 8863 3.288242 GCAATAAATATGACCGCGTGTG 58.712 45.455 4.92 0.00 0.00 3.82
4322 8864 2.033236 CGCAATAAATATGACCGCGTGT 60.033 45.455 4.92 1.93 36.69 4.49
4323 8865 2.559872 CGCAATAAATATGACCGCGTG 58.440 47.619 4.92 0.00 36.69 5.34
4324 8866 2.941891 CGCAATAAATATGACCGCGT 57.058 45.000 4.92 0.00 36.69 6.01
4603 9145 2.439156 GAAGAAGGCCATGGCGCT 60.439 61.111 29.90 23.77 43.06 5.92
4620 9162 3.104766 CTATTGCCACTGCCGCTG 58.895 61.111 0.00 0.00 36.33 5.18
4628 9170 0.453390 GGTGAGCTTGCTATTGCCAC 59.547 55.000 0.00 0.00 38.71 5.01
4629 9171 0.680921 GGGTGAGCTTGCTATTGCCA 60.681 55.000 0.00 0.00 38.71 4.92
4723 9265 0.673644 GATACTGCCAGTGCCAACGT 60.674 55.000 7.83 0.00 36.33 3.99
4724 9266 1.695893 CGATACTGCCAGTGCCAACG 61.696 60.000 7.83 2.46 36.33 4.10
4749 9291 0.381801 GACATTTGGGTATGGCAGCG 59.618 55.000 0.00 0.00 33.55 5.18
4807 9349 1.078497 TGGCACAGTTAGCATCGGG 60.078 57.895 0.00 0.00 0.00 5.14
4809 9351 1.695893 CCGTGGCACAGTTAGCATCG 61.696 60.000 19.09 0.00 41.80 3.84
4816 9358 2.587753 CACGACCGTGGCACAGTT 60.588 61.111 19.09 0.00 41.80 3.16
4843 9385 2.408022 CTTCGTACCTCCTCGGCG 59.592 66.667 0.00 0.00 35.61 6.46
4854 9396 0.102481 GAGATCCAAGCGCCTTCGTA 59.898 55.000 2.29 0.00 38.14 3.43
4863 9405 2.899339 GCGCCAGGAGATCCAAGC 60.899 66.667 0.00 2.52 38.89 4.01
4894 9436 1.066858 TCAATCAAGAGAGTCCGGCAC 60.067 52.381 0.00 0.00 0.00 5.01
4907 9449 4.437682 ACAAACCAGACCTCTCAATCAA 57.562 40.909 0.00 0.00 0.00 2.57
4914 9456 2.297597 CTCGAGAACAAACCAGACCTCT 59.702 50.000 6.58 0.00 0.00 3.69
4928 9470 0.313987 TTGCTCTTCGTGCTCGAGAA 59.686 50.000 18.75 1.15 46.81 2.87
4929 9471 0.387367 GTTGCTCTTCGTGCTCGAGA 60.387 55.000 18.75 9.85 46.81 4.04
4943 9485 1.772063 GACGCCACGACAAAGTTGCT 61.772 55.000 0.00 0.00 31.48 3.91
4960 9502 1.336755 GTTGATGTGGTGGTGTTGGAC 59.663 52.381 0.00 0.00 0.00 4.02
4996 9538 1.153549 CTGGCTTGACGACTAGGGC 60.154 63.158 0.00 0.00 0.00 5.19
5013 9555 1.969240 GCAACCCTCTCCTCCTCATCT 60.969 57.143 0.00 0.00 0.00 2.90
5060 9602 1.588239 TCCTTGATGGAGGTCTGCAT 58.412 50.000 4.66 4.66 44.47 3.96
5075 9617 3.391382 CCTTCGCCGGGTCTCCTT 61.391 66.667 2.18 0.00 0.00 3.36
5084 9626 1.448922 CTACTCCTCCTCCTTCGCCG 61.449 65.000 0.00 0.00 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.