Multiple sequence alignment - TraesCS2A01G342700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G342700 chr2A 100.000 4853 0 0 1 4853 579702002 579697150 0.000000e+00 8962.0
1 TraesCS2A01G342700 chr2A 89.294 822 43 22 1 794 632430113 632430917 0.000000e+00 989.0
2 TraesCS2A01G342700 chr2A 81.579 342 42 6 1 337 205252182 205251857 3.730000e-66 263.0
3 TraesCS2A01G342700 chr2A 99.029 103 1 0 4621 4723 572846387 572846285 8.290000e-43 185.0
4 TraesCS2A01G342700 chr2B 91.790 1486 81 23 901 2366 485896441 485894977 0.000000e+00 2030.0
5 TraesCS2A01G342700 chr2B 92.105 1178 69 12 3055 4226 485894157 485892998 0.000000e+00 1639.0
6 TraesCS2A01G342700 chr2B 94.344 389 15 3 2392 2774 485894831 485894444 1.500000e-164 590.0
7 TraesCS2A01G342700 chr2B 79.701 803 93 38 3 790 691909229 691908482 2.590000e-142 516.0
8 TraesCS2A01G342700 chr2D 94.275 1310 60 6 2924 4226 412473351 412472050 0.000000e+00 1989.0
9 TraesCS2A01G342700 chr2D 92.906 1325 52 24 1049 2366 412475151 412473862 0.000000e+00 1888.0
10 TraesCS2A01G342700 chr2D 94.236 399 15 4 2382 2774 412473741 412473345 1.930000e-168 603.0
11 TraesCS2A01G342700 chr2D 94.177 395 18 3 4228 4621 412471967 412471577 8.990000e-167 597.0
12 TraesCS2A01G342700 chr2D 96.226 159 5 1 2773 2930 243656312 243656154 4.820000e-65 259.0
13 TraesCS2A01G342700 chr2D 94.737 133 6 1 4721 4853 412471575 412471444 6.370000e-49 206.0
14 TraesCS2A01G342700 chr2D 84.348 115 9 4 900 1006 412475264 412475151 2.390000e-18 104.0
15 TraesCS2A01G342700 chr6B 82.769 650 76 17 1833 2461 216634545 216633911 9.180000e-152 547.0
16 TraesCS2A01G342700 chr6B 96.226 159 5 1 2773 2930 227274691 227274533 4.820000e-65 259.0
17 TraesCS2A01G342700 chr6B 99.029 103 1 0 4621 4723 59734471 59734573 8.290000e-43 185.0
18 TraesCS2A01G342700 chr6B 94.737 95 3 2 788 881 506874003 506874096 3.910000e-31 147.0
19 TraesCS2A01G342700 chr6B 95.506 89 4 0 795 883 678316616 678316528 5.060000e-30 143.0
20 TraesCS2A01G342700 chr6D 84.888 536 56 15 1833 2365 122992713 122992200 7.200000e-143 518.0
21 TraesCS2A01G342700 chr6D 93.878 98 5 1 787 884 216847370 216847274 3.910000e-31 147.0
22 TraesCS2A01G342700 chr6D 93.976 83 5 0 2379 2461 122992107 122992025 5.100000e-25 126.0
23 TraesCS2A01G342700 chr5B 79.426 802 100 36 3 790 268822127 268822877 1.560000e-139 507.0
24 TraesCS2A01G342700 chr5B 85.437 206 19 3 1 206 287442891 287443085 2.290000e-48 204.0
25 TraesCS2A01G342700 chr3B 79.151 801 101 38 3 790 439736826 439737573 1.210000e-135 494.0
26 TraesCS2A01G342700 chr3B 76.588 803 105 46 1 777 800135786 800135041 9.930000e-97 364.0
27 TraesCS2A01G342700 chr3B 96.250 160 4 2 2773 2930 204280417 204280258 1.340000e-65 261.0
28 TraesCS2A01G342700 chr4A 92.835 321 15 2 1 321 679186207 679186519 4.430000e-125 459.0
29 TraesCS2A01G342700 chr4A 91.022 323 19 3 472 787 679186604 679186923 1.250000e-115 427.0
30 TraesCS2A01G342700 chr4A 93.814 97 5 1 788 883 691017827 691017923 1.410000e-30 145.0
31 TraesCS2A01G342700 chr6A 84.309 427 39 11 1833 2255 158242429 158242831 4.550000e-105 392.0
32 TraesCS2A01G342700 chr6A 99.038 104 1 0 4620 4723 569695270 569695167 2.310000e-43 187.0
33 TraesCS2A01G342700 chr7B 76.902 723 104 32 78 791 308666761 308666093 7.730000e-93 351.0
34 TraesCS2A01G342700 chr7B 87.398 246 24 4 2016 2258 589939078 589938837 4.780000e-70 276.0
35 TraesCS2A01G342700 chr1A 83.673 343 36 5 1 339 577818575 577818901 6.100000e-79 305.0
36 TraesCS2A01G342700 chr1A 97.222 108 2 1 4617 4723 329179122 329179015 1.070000e-41 182.0
37 TraesCS2A01G342700 chr5D 85.866 283 28 4 1 282 369106398 369106669 1.710000e-74 291.0
38 TraesCS2A01G342700 chr5D 82.659 173 20 9 268 435 369106690 369106857 1.410000e-30 145.0
39 TraesCS2A01G342700 chr4D 83.537 328 32 6 4 328 358473117 358472809 2.210000e-73 287.0
40 TraesCS2A01G342700 chr4D 96.226 159 5 1 2773 2930 313574202 313574360 4.820000e-65 259.0
41 TraesCS2A01G342700 chr4D 93.000 100 6 1 784 883 11557443 11557345 1.410000e-30 145.0
42 TraesCS2A01G342700 chr3D 96.250 160 5 1 2773 2931 324319277 324319118 1.340000e-65 261.0
43 TraesCS2A01G342700 chr3D 78.378 148 19 11 4252 4393 302293724 302293864 3.110000e-12 84.2
44 TraesCS2A01G342700 chr1B 96.226 159 5 1 2773 2930 326922998 326922840 4.820000e-65 259.0
45 TraesCS2A01G342700 chr5A 94.545 165 8 1 2767 2930 130129646 130129810 2.240000e-63 254.0
46 TraesCS2A01G342700 chr5A 96.460 113 2 2 4613 4723 705598414 705598526 8.290000e-43 185.0
47 TraesCS2A01G342700 chr4B 95.597 159 6 1 2773 2930 482657419 482657261 2.240000e-63 254.0
48 TraesCS2A01G342700 chr4B 100.000 104 0 0 4620 4723 2710085 2710188 4.960000e-45 193.0
49 TraesCS2A01G342700 chr4B 85.000 200 17 7 4 202 168822099 168821912 1.780000e-44 191.0
50 TraesCS2A01G342700 chr4B 100.000 103 0 0 4621 4723 535069636 535069534 1.780000e-44 191.0
51 TraesCS2A01G342700 chr4B 96.739 92 2 1 792 882 286079574 286079483 8.410000e-33 152.0
52 TraesCS2A01G342700 chr4B 96.667 90 3 0 793 882 392446784 392446873 3.030000e-32 150.0
53 TraesCS2A01G342700 chr4B 96.629 89 3 0 792 880 44252009 44252097 1.090000e-31 148.0
54 TraesCS2A01G342700 chr1D 93.491 169 9 2 2764 2930 452590794 452590962 2.900000e-62 250.0
55 TraesCS2A01G342700 chr7A 99.038 104 1 0 4620 4723 606195219 606195116 2.310000e-43 187.0
56 TraesCS2A01G342700 chr7A 79.856 278 33 9 517 784 724376007 724375743 1.070000e-41 182.0
57 TraesCS2A01G342700 chr7A 96.667 90 3 0 791 880 223532987 223532898 3.030000e-32 150.0
58 TraesCS2A01G342700 chrUn 99.020 102 1 0 4622 4723 122648754 122648653 2.980000e-42 183.0
59 TraesCS2A01G342700 chrUn 77.340 203 28 12 569 763 87953799 87953607 2.390000e-18 104.0
60 TraesCS2A01G342700 chr7D 92.208 77 4 2 2385 2461 518776324 518776250 1.850000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G342700 chr2A 579697150 579702002 4852 True 8962.000000 8962 100.000000 1 4853 1 chr2A.!!$R3 4852
1 TraesCS2A01G342700 chr2A 632430113 632430917 804 False 989.000000 989 89.294000 1 794 1 chr2A.!!$F1 793
2 TraesCS2A01G342700 chr2B 485892998 485896441 3443 True 1419.666667 2030 92.746333 901 4226 3 chr2B.!!$R2 3325
3 TraesCS2A01G342700 chr2B 691908482 691909229 747 True 516.000000 516 79.701000 3 790 1 chr2B.!!$R1 787
4 TraesCS2A01G342700 chr2D 412471444 412475264 3820 True 897.833333 1989 92.446500 900 4853 6 chr2D.!!$R2 3953
5 TraesCS2A01G342700 chr6B 216633911 216634545 634 True 547.000000 547 82.769000 1833 2461 1 chr6B.!!$R1 628
6 TraesCS2A01G342700 chr6D 122992025 122992713 688 True 322.000000 518 89.432000 1833 2461 2 chr6D.!!$R2 628
7 TraesCS2A01G342700 chr5B 268822127 268822877 750 False 507.000000 507 79.426000 3 790 1 chr5B.!!$F1 787
8 TraesCS2A01G342700 chr3B 439736826 439737573 747 False 494.000000 494 79.151000 3 790 1 chr3B.!!$F1 787
9 TraesCS2A01G342700 chr3B 800135041 800135786 745 True 364.000000 364 76.588000 1 777 1 chr3B.!!$R2 776
10 TraesCS2A01G342700 chr4A 679186207 679186923 716 False 443.000000 459 91.928500 1 787 2 chr4A.!!$F2 786
11 TraesCS2A01G342700 chr7B 308666093 308666761 668 True 351.000000 351 76.902000 78 791 1 chr7B.!!$R1 713

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
398 414 0.302890 GTGTACGACGATCCGACGAT 59.697 55.0 16.46 5.28 46.01 3.73 F
982 1050 0.468226 AGTCAGCGGAAAAGGTCACA 59.532 50.0 0.00 0.00 0.00 3.58 F
1522 1598 0.248377 GGCAGCTTGATGATTGCGAC 60.248 55.0 0.00 0.00 37.43 5.19 F
2110 2203 0.037232 GAACCTGTCTCTTCCCACGG 60.037 60.0 0.00 0.00 0.00 4.94 F
2113 2206 0.176680 CCTGTCTCTTCCCACGGATG 59.823 60.0 0.00 0.00 0.00 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1507 1583 0.026803 GGACGTCGCAATCATCAAGC 59.973 55.000 9.92 0.0 0.00 4.01 R
2094 2176 0.176680 CATCCGTGGGAAGAGACAGG 59.823 60.000 0.00 0.0 34.34 4.00 R
2836 3117 0.179100 CCATGAGTTGGTCGCGAGAT 60.179 55.000 10.24 0.0 45.19 2.75 R
3537 3980 1.077787 CCCATAGGCGAACCAAGCA 60.078 57.895 0.00 0.0 39.06 3.91 R
3888 4333 2.467838 CACAGATGCTCACCTATGACG 58.532 52.381 0.00 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 112 1.202463 AGGCAGTTGATAGCAGCTACG 60.202 52.381 3.59 0.00 33.49 3.51
149 154 7.065803 GGCTAGTTGCAATCACTCAATAGTTTA 59.934 37.037 0.59 0.00 45.15 2.01
186 191 8.548877 GTGGATTATATAGTTGGGTATGGACAT 58.451 37.037 0.00 0.00 0.00 3.06
228 244 6.293626 GCATAGGTAGACAAAAATCGCATGAT 60.294 38.462 0.00 0.00 35.98 2.45
398 414 0.302890 GTGTACGACGATCCGACGAT 59.697 55.000 16.46 5.28 46.01 3.73
399 415 0.578683 TGTACGACGATCCGACGATC 59.421 55.000 16.46 0.00 46.01 3.69
578 631 5.355596 AGCAAGGAAGAAGATAACGATGAG 58.644 41.667 0.00 0.00 0.00 2.90
595 648 1.416401 TGAGGCCTTTCTTTCACGAGT 59.584 47.619 6.77 0.00 0.00 4.18
597 650 2.879026 GAGGCCTTTCTTTCACGAGTTT 59.121 45.455 6.77 0.00 0.00 2.66
599 652 3.699538 AGGCCTTTCTTTCACGAGTTTTT 59.300 39.130 0.00 0.00 0.00 1.94
795 855 1.832998 CAAACGGGGCCTAAGGTACTA 59.167 52.381 0.84 0.00 38.49 1.82
796 856 1.489481 AACGGGGCCTAAGGTACTAC 58.511 55.000 0.84 0.00 38.49 2.73
797 857 0.633378 ACGGGGCCTAAGGTACTACT 59.367 55.000 0.84 0.00 38.49 2.57
798 858 1.326328 CGGGGCCTAAGGTACTACTC 58.674 60.000 0.84 0.00 38.49 2.59
799 859 1.714541 GGGGCCTAAGGTACTACTCC 58.285 60.000 0.84 0.00 38.49 3.85
800 860 1.714541 GGGCCTAAGGTACTACTCCC 58.285 60.000 0.84 0.00 38.49 4.30
801 861 1.219980 GGGCCTAAGGTACTACTCCCT 59.780 57.143 0.84 0.00 38.49 4.20
802 862 2.596346 GGCCTAAGGTACTACTCCCTC 58.404 57.143 0.00 0.00 38.49 4.30
803 863 2.596346 GCCTAAGGTACTACTCCCTCC 58.404 57.143 0.00 0.00 38.49 4.30
804 864 2.861274 CCTAAGGTACTACTCCCTCCG 58.139 57.143 0.00 0.00 38.49 4.63
805 865 2.174424 CCTAAGGTACTACTCCCTCCGT 59.826 54.545 0.00 0.00 38.49 4.69
806 866 2.915657 AAGGTACTACTCCCTCCGTT 57.084 50.000 0.00 0.00 38.49 4.44
807 867 2.433662 AGGTACTACTCCCTCCGTTC 57.566 55.000 0.00 0.00 36.02 3.95
808 868 1.064091 AGGTACTACTCCCTCCGTTCC 60.064 57.143 0.00 0.00 36.02 3.62
809 869 1.341383 GGTACTACTCCCTCCGTTCCA 60.341 57.143 0.00 0.00 0.00 3.53
810 870 2.450476 GTACTACTCCCTCCGTTCCAA 58.550 52.381 0.00 0.00 0.00 3.53
811 871 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
812 872 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
813 873 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
814 874 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
815 875 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
816 876 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
817 877 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
818 878 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
819 879 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
820 880 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
821 881 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
822 882 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
823 883 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
824 884 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
825 885 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
826 886 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
827 887 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
828 888 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
829 889 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
830 890 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
831 891 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
832 892 9.219603 TCCAAAATAGATGACTCAACTTTGTAG 57.780 33.333 0.00 0.00 0.00 2.74
833 893 9.003658 CCAAAATAGATGACTCAACTTTGTAGT 57.996 33.333 0.00 0.00 35.68 2.73
860 920 9.449719 AACTTTAGTATAAAGTTGGGTCATCTG 57.550 33.333 20.99 0.00 45.58 2.90
861 921 8.603304 ACTTTAGTATAAAGTTGGGTCATCTGT 58.397 33.333 8.72 0.00 37.18 3.41
862 922 9.449719 CTTTAGTATAAAGTTGGGTCATCTGTT 57.550 33.333 1.87 0.00 0.00 3.16
863 923 9.802039 TTTAGTATAAAGTTGGGTCATCTGTTT 57.198 29.630 0.00 0.00 0.00 2.83
864 924 9.802039 TTAGTATAAAGTTGGGTCATCTGTTTT 57.198 29.630 0.00 0.00 0.00 2.43
865 925 8.110860 AGTATAAAGTTGGGTCATCTGTTTTG 57.889 34.615 0.00 0.00 0.00 2.44
866 926 7.942341 AGTATAAAGTTGGGTCATCTGTTTTGA 59.058 33.333 0.00 0.00 0.00 2.69
867 927 5.930837 AAAGTTGGGTCATCTGTTTTGAA 57.069 34.783 0.00 0.00 0.00 2.69
868 928 5.930837 AAGTTGGGTCATCTGTTTTGAAA 57.069 34.783 0.00 0.00 0.00 2.69
869 929 5.262588 AGTTGGGTCATCTGTTTTGAAAC 57.737 39.130 0.00 0.00 39.33 2.78
870 930 3.980646 TGGGTCATCTGTTTTGAAACG 57.019 42.857 2.53 0.00 41.74 3.60
871 931 2.621055 TGGGTCATCTGTTTTGAAACGG 59.379 45.455 8.75 8.75 44.68 4.44
877 937 2.846193 TCTGTTTTGAAACGGAGGGAG 58.154 47.619 12.78 0.00 46.35 4.30
878 938 2.171870 TCTGTTTTGAAACGGAGGGAGT 59.828 45.455 12.78 0.00 46.35 3.85
879 939 3.388676 TCTGTTTTGAAACGGAGGGAGTA 59.611 43.478 12.78 0.00 46.35 2.59
880 940 4.041198 TCTGTTTTGAAACGGAGGGAGTAT 59.959 41.667 12.78 0.00 46.35 2.12
881 941 5.246656 TCTGTTTTGAAACGGAGGGAGTATA 59.753 40.000 12.78 0.00 46.35 1.47
882 942 5.867330 TGTTTTGAAACGGAGGGAGTATAA 58.133 37.500 2.53 0.00 41.74 0.98
883 943 6.297582 TGTTTTGAAACGGAGGGAGTATAAA 58.702 36.000 2.53 0.00 41.74 1.40
884 944 6.771749 TGTTTTGAAACGGAGGGAGTATAAAA 59.228 34.615 2.53 0.00 41.74 1.52
885 945 7.284944 TGTTTTGAAACGGAGGGAGTATAAAAA 59.715 33.333 2.53 0.00 41.74 1.94
906 966 0.534203 AACATCGACAAGGCCACGTT 60.534 50.000 5.01 0.00 0.00 3.99
919 979 3.945285 AGGCCACGTTGTTGATAAATAGG 59.055 43.478 5.01 0.00 0.00 2.57
927 988 6.127842 ACGTTGTTGATAAATAGGCGGAAAAT 60.128 34.615 0.00 0.00 0.00 1.82
929 990 6.385649 TGTTGATAAATAGGCGGAAAATCC 57.614 37.500 0.00 0.00 0.00 3.01
930 991 6.126409 TGTTGATAAATAGGCGGAAAATCCT 58.874 36.000 0.00 0.00 33.30 3.24
931 992 6.262273 TGTTGATAAATAGGCGGAAAATCCTC 59.738 38.462 0.00 0.00 33.30 3.71
936 1004 4.618920 ATAGGCGGAAAATCCTCGTTAT 57.381 40.909 0.00 0.00 33.30 1.89
938 1006 1.602377 GGCGGAAAATCCTCGTTATGG 59.398 52.381 0.00 0.00 33.30 2.74
940 1008 1.602377 CGGAAAATCCTCGTTATGGGC 59.398 52.381 0.00 0.00 33.30 5.36
982 1050 0.468226 AGTCAGCGGAAAAGGTCACA 59.532 50.000 0.00 0.00 0.00 3.58
996 1064 1.229209 TCACACCTCCCAGACTCCC 60.229 63.158 0.00 0.00 0.00 4.30
1006 1074 2.025226 TCCCAGACTCCCACTACAGTAG 60.025 54.545 6.00 6.00 0.00 2.57
1286 1362 4.406173 CTGGAGCTCGACGTGCGT 62.406 66.667 15.41 0.00 41.80 5.24
1436 1512 3.517500 ACCAGGTTTTTGACACCAATGTT 59.482 39.130 0.00 0.00 39.95 2.71
1507 1583 4.493547 TGTTTCTTCTGTTTGTTTGGCAG 58.506 39.130 0.00 0.00 0.00 4.85
1522 1598 0.248377 GGCAGCTTGATGATTGCGAC 60.248 55.000 0.00 0.00 37.43 5.19
1544 1620 5.262804 ACGTCCTCTAAGGTAGACAAGATT 58.737 41.667 0.00 0.00 36.53 2.40
1561 1637 8.331740 AGACAAGATTTTGGATTCTGGATTCTA 58.668 33.333 0.57 0.00 38.66 2.10
1583 1659 8.231692 TCTAACAGATTCATGGTGAAACAAAA 57.768 30.769 0.00 0.00 40.12 2.44
1585 1661 6.469782 ACAGATTCATGGTGAAACAAAAGT 57.530 33.333 0.00 0.00 40.12 2.66
1716 1794 4.264253 TCATGGGAGTGCTTCAAATGTAG 58.736 43.478 0.00 0.00 0.00 2.74
1717 1795 3.788227 TGGGAGTGCTTCAAATGTAGT 57.212 42.857 0.00 0.00 0.00 2.73
1718 1796 4.901197 TGGGAGTGCTTCAAATGTAGTA 57.099 40.909 0.00 0.00 0.00 1.82
1724 1802 7.171678 GGGAGTGCTTCAAATGTAGTATATGTC 59.828 40.741 0.00 0.00 0.00 3.06
1737 1815 8.226819 TGTAGTATATGTCCAGAAGACTTGAG 57.773 38.462 0.00 0.00 46.46 3.02
1738 1816 8.053355 TGTAGTATATGTCCAGAAGACTTGAGA 58.947 37.037 0.00 0.00 46.46 3.27
1740 1818 8.006298 AGTATATGTCCAGAAGACTTGAGAAG 57.994 38.462 0.00 0.00 46.46 2.85
1741 1819 6.865834 ATATGTCCAGAAGACTTGAGAAGT 57.134 37.500 0.00 0.00 46.46 3.01
1742 1820 7.962995 ATATGTCCAGAAGACTTGAGAAGTA 57.037 36.000 0.00 0.00 46.46 2.24
1743 1821 5.455056 TGTCCAGAAGACTTGAGAAGTAC 57.545 43.478 0.00 0.00 46.46 2.73
1744 1822 4.023107 TGTCCAGAAGACTTGAGAAGTACG 60.023 45.833 0.00 0.00 46.46 3.67
1787 1865 7.543868 GGTATGCTGTCAGTATCTAGCTTATTG 59.456 40.741 6.71 0.00 37.10 1.90
1978 2057 8.447053 GGTCAGTTGTCTTTCAAAGAATATCTC 58.553 37.037 0.00 0.00 39.67 2.75
1987 2066 8.163408 TCTTTCAAAGAATATCTCTTGTCCCAA 58.837 33.333 0.00 0.00 44.00 4.12
1999 2081 4.469657 TCTTGTCCCAATAGCAAAACTGT 58.530 39.130 0.00 0.00 0.00 3.55
2043 2125 3.868077 GGAGAAGTATAGTGTGCTTGCTG 59.132 47.826 0.00 0.00 32.52 4.41
2059 2141 1.060937 CTGCTGCGATGTTAACGGC 59.939 57.895 0.26 5.23 0.00 5.68
2094 2176 6.074142 GCAATTGAAATTGTGGAGTTCAGAAC 60.074 38.462 10.34 5.00 45.77 3.01
2103 2185 3.070302 GTGGAGTTCAGAACCTGTCTCTT 59.930 47.826 9.85 0.00 35.67 2.85
2108 2201 1.971357 TCAGAACCTGTCTCTTCCCAC 59.029 52.381 0.00 0.00 32.70 4.61
2109 2202 0.969894 AGAACCTGTCTCTTCCCACG 59.030 55.000 0.00 0.00 0.00 4.94
2110 2203 0.037232 GAACCTGTCTCTTCCCACGG 60.037 60.000 0.00 0.00 0.00 4.94
2111 2204 0.471211 AACCTGTCTCTTCCCACGGA 60.471 55.000 0.00 0.00 0.00 4.69
2112 2205 0.252284 ACCTGTCTCTTCCCACGGAT 60.252 55.000 0.00 0.00 0.00 4.18
2113 2206 0.176680 CCTGTCTCTTCCCACGGATG 59.823 60.000 0.00 0.00 0.00 3.51
2114 2207 0.460987 CTGTCTCTTCCCACGGATGC 60.461 60.000 0.00 0.00 0.00 3.91
2115 2208 0.904865 TGTCTCTTCCCACGGATGCT 60.905 55.000 0.00 0.00 0.00 3.79
2116 2209 1.112113 GTCTCTTCCCACGGATGCTA 58.888 55.000 0.00 0.00 0.00 3.49
2117 2210 1.689273 GTCTCTTCCCACGGATGCTAT 59.311 52.381 0.00 0.00 0.00 2.97
2118 2211 2.891580 GTCTCTTCCCACGGATGCTATA 59.108 50.000 0.00 0.00 0.00 1.31
2121 2214 2.492088 TCTTCCCACGGATGCTATATCG 59.508 50.000 0.00 0.00 0.00 2.92
2123 2216 1.816835 TCCCACGGATGCTATATCGTC 59.183 52.381 0.00 0.00 33.31 4.20
2216 2310 4.035208 AGCAGTTGTTTCACCTTTAAGACG 59.965 41.667 0.00 0.00 0.00 4.18
2243 2337 8.194104 GTCTCTCATCTGAAAGCTTAGTGATAA 58.806 37.037 0.00 0.00 0.00 1.75
2247 2341 9.107177 CTCATCTGAAAGCTTAGTGATAACAAT 57.893 33.333 0.00 0.00 0.00 2.71
2354 2482 7.295322 TGGATGGTTCATTTTTGTAATGTCA 57.705 32.000 0.00 0.00 0.00 3.58
2429 2702 5.119931 TGCATTTGTGTGACTAAATGACC 57.880 39.130 21.32 10.74 43.51 4.02
2631 2904 5.675684 AAGGTTTGTGTGTTCAAGGATTT 57.324 34.783 0.00 0.00 0.00 2.17
2638 2911 8.379902 GTTTGTGTGTTCAAGGATTTTTGTTAG 58.620 33.333 0.00 0.00 0.00 2.34
2653 2926 7.985634 TTTTTGTTAGAGTGATTTTGTGCTC 57.014 32.000 0.00 0.00 0.00 4.26
2659 2932 4.260170 AGAGTGATTTTGTGCTCTCCATC 58.740 43.478 0.00 0.00 33.51 3.51
2660 2933 3.005554 AGTGATTTTGTGCTCTCCATCG 58.994 45.455 0.00 0.00 0.00 3.84
2712 2989 1.009829 GCATCTGAAGGTACAAGCCG 58.990 55.000 0.00 0.00 0.00 5.52
2745 3026 7.466746 ACATTACTTATGGATGCAACTTTGT 57.533 32.000 0.00 0.00 38.64 2.83
2784 3065 6.959671 TGAAATTCCTTCAACAACAACAAC 57.040 33.333 0.00 0.00 41.21 3.32
2785 3066 6.459066 TGAAATTCCTTCAACAACAACAACA 58.541 32.000 0.00 0.00 41.21 3.33
2786 3067 6.931281 TGAAATTCCTTCAACAACAACAACAA 59.069 30.769 0.00 0.00 41.21 2.83
2787 3068 7.442364 TGAAATTCCTTCAACAACAACAACAAA 59.558 29.630 0.00 0.00 41.21 2.83
2788 3069 6.720012 ATTCCTTCAACAACAACAACAAAC 57.280 33.333 0.00 0.00 0.00 2.93
2789 3070 4.561105 TCCTTCAACAACAACAACAAACC 58.439 39.130 0.00 0.00 0.00 3.27
2790 3071 4.282195 TCCTTCAACAACAACAACAAACCT 59.718 37.500 0.00 0.00 0.00 3.50
2791 3072 4.994217 CCTTCAACAACAACAACAAACCTT 59.006 37.500 0.00 0.00 0.00 3.50
2792 3073 5.468409 CCTTCAACAACAACAACAAACCTTT 59.532 36.000 0.00 0.00 0.00 3.11
2793 3074 6.647067 CCTTCAACAACAACAACAAACCTTTA 59.353 34.615 0.00 0.00 0.00 1.85
2794 3075 7.148656 CCTTCAACAACAACAACAAACCTTTAG 60.149 37.037 0.00 0.00 0.00 1.85
2795 3076 6.750148 TCAACAACAACAACAAACCTTTAGT 58.250 32.000 0.00 0.00 0.00 2.24
2796 3077 6.864165 TCAACAACAACAACAAACCTTTAGTC 59.136 34.615 0.00 0.00 0.00 2.59
2797 3078 5.716094 ACAACAACAACAAACCTTTAGTCC 58.284 37.500 0.00 0.00 0.00 3.85
2798 3079 4.994907 ACAACAACAAACCTTTAGTCCC 57.005 40.909 0.00 0.00 0.00 4.46
2799 3080 4.345854 ACAACAACAAACCTTTAGTCCCA 58.654 39.130 0.00 0.00 0.00 4.37
2800 3081 4.773149 ACAACAACAAACCTTTAGTCCCAA 59.227 37.500 0.00 0.00 0.00 4.12
2801 3082 5.246429 ACAACAACAAACCTTTAGTCCCAAA 59.754 36.000 0.00 0.00 0.00 3.28
2802 3083 5.333299 ACAACAAACCTTTAGTCCCAAAC 57.667 39.130 0.00 0.00 0.00 2.93
2803 3084 4.773149 ACAACAAACCTTTAGTCCCAAACA 59.227 37.500 0.00 0.00 0.00 2.83
2804 3085 5.246429 ACAACAAACCTTTAGTCCCAAACAA 59.754 36.000 0.00 0.00 0.00 2.83
2805 3086 5.592104 ACAAACCTTTAGTCCCAAACAAG 57.408 39.130 0.00 0.00 0.00 3.16
2806 3087 5.020795 ACAAACCTTTAGTCCCAAACAAGT 58.979 37.500 0.00 0.00 0.00 3.16
2807 3088 5.482526 ACAAACCTTTAGTCCCAAACAAGTT 59.517 36.000 0.00 0.00 0.00 2.66
2808 3089 5.592104 AACCTTTAGTCCCAAACAAGTTG 57.408 39.130 0.00 0.00 36.94 3.16
2816 3097 1.069596 CAAACAAGTTGGGGCAGGC 59.930 57.895 7.96 0.00 33.18 4.85
2817 3098 1.075301 AAACAAGTTGGGGCAGGCT 60.075 52.632 7.96 0.00 0.00 4.58
2818 3099 0.187361 AAACAAGTTGGGGCAGGCTA 59.813 50.000 7.96 0.00 0.00 3.93
2819 3100 0.251341 AACAAGTTGGGGCAGGCTAG 60.251 55.000 7.96 0.00 0.00 3.42
2820 3101 1.133809 ACAAGTTGGGGCAGGCTAGA 61.134 55.000 7.96 0.00 0.00 2.43
2821 3102 0.393537 CAAGTTGGGGCAGGCTAGAG 60.394 60.000 0.00 0.00 0.00 2.43
2822 3103 1.566298 AAGTTGGGGCAGGCTAGAGG 61.566 60.000 0.00 0.00 0.00 3.69
2823 3104 2.124996 TTGGGGCAGGCTAGAGGT 59.875 61.111 0.00 0.00 0.00 3.85
2824 3105 2.300967 TTGGGGCAGGCTAGAGGTG 61.301 63.158 0.00 0.00 0.00 4.00
2825 3106 2.365635 GGGGCAGGCTAGAGGTGA 60.366 66.667 0.00 0.00 0.00 4.02
2826 3107 1.995626 GGGGCAGGCTAGAGGTGAA 60.996 63.158 0.00 0.00 0.00 3.18
2827 3108 1.562672 GGGGCAGGCTAGAGGTGAAA 61.563 60.000 0.00 0.00 0.00 2.69
2828 3109 0.393132 GGGCAGGCTAGAGGTGAAAC 60.393 60.000 0.00 0.00 0.00 2.78
2843 3124 2.540101 GTGAAACCCATAAGATCTCGCG 59.460 50.000 0.00 0.00 0.00 5.87
2844 3125 2.429250 TGAAACCCATAAGATCTCGCGA 59.571 45.455 9.26 9.26 0.00 5.87
2845 3126 2.510768 AACCCATAAGATCTCGCGAC 57.489 50.000 3.71 0.00 0.00 5.19
2846 3127 0.674534 ACCCATAAGATCTCGCGACC 59.325 55.000 3.71 0.00 0.00 4.79
2847 3128 0.673985 CCCATAAGATCTCGCGACCA 59.326 55.000 3.71 0.00 0.00 4.02
2848 3129 1.068588 CCCATAAGATCTCGCGACCAA 59.931 52.381 3.71 0.00 0.00 3.67
2849 3130 2.128035 CCATAAGATCTCGCGACCAAC 58.872 52.381 3.71 0.00 0.00 3.77
2850 3131 2.223829 CCATAAGATCTCGCGACCAACT 60.224 50.000 3.71 0.00 0.00 3.16
2851 3132 2.846039 TAAGATCTCGCGACCAACTC 57.154 50.000 3.71 0.00 0.00 3.01
2852 3133 0.888619 AAGATCTCGCGACCAACTCA 59.111 50.000 3.71 0.00 0.00 3.41
2853 3134 1.107114 AGATCTCGCGACCAACTCAT 58.893 50.000 3.71 0.00 0.00 2.90
2854 3135 1.202348 AGATCTCGCGACCAACTCATG 60.202 52.381 3.71 0.00 0.00 3.07
2863 3144 3.344703 CCAACTCATGGTTCTGGCA 57.655 52.632 0.00 0.00 44.85 4.92
2864 3145 1.619654 CCAACTCATGGTTCTGGCAA 58.380 50.000 0.00 0.00 44.85 4.52
2865 3146 1.962807 CCAACTCATGGTTCTGGCAAA 59.037 47.619 0.00 0.00 44.85 3.68
2866 3147 2.564062 CCAACTCATGGTTCTGGCAAAT 59.436 45.455 0.00 0.00 44.85 2.32
2867 3148 3.581755 CAACTCATGGTTCTGGCAAATG 58.418 45.455 0.00 0.00 35.74 2.32
2868 3149 2.173519 ACTCATGGTTCTGGCAAATGG 58.826 47.619 0.00 0.00 0.00 3.16
2869 3150 2.225091 ACTCATGGTTCTGGCAAATGGA 60.225 45.455 0.00 0.00 0.00 3.41
2870 3151 3.028850 CTCATGGTTCTGGCAAATGGAT 58.971 45.455 0.00 0.00 0.00 3.41
2871 3152 4.209538 CTCATGGTTCTGGCAAATGGATA 58.790 43.478 0.00 0.00 0.00 2.59
2872 3153 4.209538 TCATGGTTCTGGCAAATGGATAG 58.790 43.478 0.00 0.00 0.00 2.08
2873 3154 2.378038 TGGTTCTGGCAAATGGATAGC 58.622 47.619 0.00 0.00 0.00 2.97
2874 3155 2.291475 TGGTTCTGGCAAATGGATAGCA 60.291 45.455 0.00 0.00 0.00 3.49
2875 3156 2.760092 GGTTCTGGCAAATGGATAGCAA 59.240 45.455 0.00 0.00 0.00 3.91
2876 3157 3.181483 GGTTCTGGCAAATGGATAGCAAG 60.181 47.826 0.00 0.00 0.00 4.01
2877 3158 2.026641 TCTGGCAAATGGATAGCAAGC 58.973 47.619 0.00 0.00 0.00 4.01
2878 3159 2.029623 CTGGCAAATGGATAGCAAGCT 58.970 47.619 0.00 0.00 0.00 3.74
2879 3160 2.429610 CTGGCAAATGGATAGCAAGCTT 59.570 45.455 0.00 0.00 0.00 3.74
2880 3161 2.428171 TGGCAAATGGATAGCAAGCTTC 59.572 45.455 0.00 0.00 0.00 3.86
2881 3162 2.223900 GGCAAATGGATAGCAAGCTTCC 60.224 50.000 0.00 7.95 0.00 3.46
2882 3163 2.428171 GCAAATGGATAGCAAGCTTCCA 59.572 45.455 20.33 20.33 43.37 3.53
2884 3165 4.617959 CAAATGGATAGCAAGCTTCCATG 58.382 43.478 25.38 17.68 46.93 3.66
2885 3166 1.683943 TGGATAGCAAGCTTCCATGC 58.316 50.000 16.61 0.00 42.87 4.06
2886 3167 1.064537 TGGATAGCAAGCTTCCATGCA 60.065 47.619 16.61 6.28 44.95 3.96
2887 3168 1.336125 GGATAGCAAGCTTCCATGCAC 59.664 52.381 10.57 2.11 44.95 4.57
2888 3169 1.336125 GATAGCAAGCTTCCATGCACC 59.664 52.381 10.57 0.00 44.95 5.01
2889 3170 0.680921 TAGCAAGCTTCCATGCACCC 60.681 55.000 10.57 0.00 44.95 4.61
2890 3171 3.010413 GCAAGCTTCCATGCACCCC 62.010 63.158 0.00 0.00 42.12 4.95
2891 3172 1.304713 CAAGCTTCCATGCACCCCT 60.305 57.895 0.00 0.00 34.99 4.79
2892 3173 1.304713 AAGCTTCCATGCACCCCTG 60.305 57.895 0.00 0.00 34.99 4.45
2893 3174 2.036256 GCTTCCATGCACCCCTGT 59.964 61.111 0.00 0.00 0.00 4.00
2894 3175 2.048603 GCTTCCATGCACCCCTGTC 61.049 63.158 0.00 0.00 0.00 3.51
2895 3176 1.379044 CTTCCATGCACCCCTGTCC 60.379 63.158 0.00 0.00 0.00 4.02
2896 3177 2.141011 CTTCCATGCACCCCTGTCCA 62.141 60.000 0.00 0.00 0.00 4.02
2897 3178 1.508667 TTCCATGCACCCCTGTCCAT 61.509 55.000 0.00 0.00 0.00 3.41
2898 3179 1.755395 CCATGCACCCCTGTCCATG 60.755 63.158 0.00 0.00 35.90 3.66
2899 3180 1.755395 CATGCACCCCTGTCCATGG 60.755 63.158 4.97 4.97 33.28 3.66
2900 3181 3.667217 ATGCACCCCTGTCCATGGC 62.667 63.158 6.96 2.72 0.00 4.40
2901 3182 4.052518 GCACCCCTGTCCATGGCT 62.053 66.667 6.96 0.00 0.00 4.75
2902 3183 2.679342 GCACCCCTGTCCATGGCTA 61.679 63.158 6.96 0.00 0.00 3.93
2903 3184 1.528824 CACCCCTGTCCATGGCTAG 59.471 63.158 6.96 7.49 0.00 3.42
2904 3185 1.082954 ACCCCTGTCCATGGCTAGT 59.917 57.895 6.96 0.00 0.00 2.57
2905 3186 0.550147 ACCCCTGTCCATGGCTAGTT 60.550 55.000 6.96 0.00 0.00 2.24
2906 3187 0.181350 CCCCTGTCCATGGCTAGTTC 59.819 60.000 6.96 0.00 0.00 3.01
2907 3188 1.207791 CCCTGTCCATGGCTAGTTCT 58.792 55.000 6.96 0.00 0.00 3.01
2908 3189 1.561542 CCCTGTCCATGGCTAGTTCTT 59.438 52.381 6.96 0.00 0.00 2.52
2909 3190 2.025887 CCCTGTCCATGGCTAGTTCTTT 60.026 50.000 6.96 0.00 0.00 2.52
2910 3191 3.012518 CCTGTCCATGGCTAGTTCTTTG 58.987 50.000 6.96 0.00 0.00 2.77
2911 3192 3.012518 CTGTCCATGGCTAGTTCTTTGG 58.987 50.000 6.96 0.00 0.00 3.28
2912 3193 2.375174 TGTCCATGGCTAGTTCTTTGGT 59.625 45.455 6.96 0.00 0.00 3.67
2913 3194 2.749621 GTCCATGGCTAGTTCTTTGGTG 59.250 50.000 6.96 0.00 0.00 4.17
2914 3195 2.642311 TCCATGGCTAGTTCTTTGGTGA 59.358 45.455 6.96 0.00 0.00 4.02
2915 3196 3.266772 TCCATGGCTAGTTCTTTGGTGAT 59.733 43.478 6.96 0.00 0.00 3.06
2916 3197 4.473196 TCCATGGCTAGTTCTTTGGTGATA 59.527 41.667 6.96 0.00 0.00 2.15
2917 3198 5.132648 TCCATGGCTAGTTCTTTGGTGATAT 59.867 40.000 6.96 0.00 0.00 1.63
2918 3199 5.829924 CCATGGCTAGTTCTTTGGTGATATT 59.170 40.000 0.00 0.00 0.00 1.28
2919 3200 6.016777 CCATGGCTAGTTCTTTGGTGATATTC 60.017 42.308 0.00 0.00 0.00 1.75
2920 3201 5.437060 TGGCTAGTTCTTTGGTGATATTCC 58.563 41.667 0.00 0.00 0.00 3.01
2921 3202 5.045213 TGGCTAGTTCTTTGGTGATATTCCA 60.045 40.000 0.00 0.00 0.00 3.53
2922 3203 5.885912 GGCTAGTTCTTTGGTGATATTCCAA 59.114 40.000 8.59 8.59 42.29 3.53
2923 3204 6.547510 GGCTAGTTCTTTGGTGATATTCCAAT 59.452 38.462 12.09 3.03 43.25 3.16
2924 3205 7.255277 GGCTAGTTCTTTGGTGATATTCCAATC 60.255 40.741 12.09 6.12 43.25 2.67
2925 3206 7.255277 GCTAGTTCTTTGGTGATATTCCAATCC 60.255 40.741 12.09 4.08 43.25 3.01
2926 3207 6.735556 AGTTCTTTGGTGATATTCCAATCCT 58.264 36.000 12.09 5.64 43.25 3.24
2927 3208 7.184862 AGTTCTTTGGTGATATTCCAATCCTT 58.815 34.615 12.09 0.00 43.25 3.36
2928 3209 7.340487 AGTTCTTTGGTGATATTCCAATCCTTC 59.660 37.037 12.09 5.42 43.25 3.46
2929 3210 6.730447 TCTTTGGTGATATTCCAATCCTTCA 58.270 36.000 12.09 0.00 43.25 3.02
2984 3266 5.788533 TGAGTTCTAATCTAACTTGGGGGAA 59.211 40.000 0.00 0.00 37.31 3.97
3089 3532 7.917730 TGATTTAATCATGTGGGGAAATGAT 57.082 32.000 3.20 0.00 43.69 2.45
3092 3535 4.411256 AATCATGTGGGGAAATGATTGC 57.589 40.909 9.46 0.00 46.63 3.56
3119 3562 7.088905 TGACAGAAACCGTAAGATCTAAGAAC 58.911 38.462 0.00 0.00 43.02 3.01
3120 3563 6.396450 ACAGAAACCGTAAGATCTAAGAACC 58.604 40.000 0.00 0.00 43.02 3.62
3155 3598 9.998106 ACATATACAACATAGGAACACTATTCC 57.002 33.333 0.00 0.00 40.42 3.01
3194 3637 5.456548 TTTCACATGTCATGTTCTTGCAT 57.543 34.783 15.98 0.00 42.70 3.96
3200 3643 5.106038 ACATGTCATGTTCTTGCATGGTTAG 60.106 40.000 12.87 0.00 44.54 2.34
3220 3663 4.820284 AGCTCTTTCAACTTGTTACTGC 57.180 40.909 0.00 0.00 0.00 4.40
3265 3708 5.708544 TGCATTTCTCCATTATCTCCCATT 58.291 37.500 0.00 0.00 0.00 3.16
3278 3721 5.896073 ATCTCCCATTCTAACTTGGTAGG 57.104 43.478 0.00 0.00 0.00 3.18
3283 3726 7.404980 TCTCCCATTCTAACTTGGTAGGTATTT 59.595 37.037 0.00 0.00 0.00 1.40
3284 3727 7.343357 TCCCATTCTAACTTGGTAGGTATTTG 58.657 38.462 0.00 0.00 0.00 2.32
3289 3732 9.975218 ATTCTAACTTGGTAGGTATTTGATTGT 57.025 29.630 0.00 0.00 0.00 2.71
3290 3733 9.802039 TTCTAACTTGGTAGGTATTTGATTGTT 57.198 29.630 0.00 0.00 0.00 2.83
3354 3797 0.253160 TGATAGTTGCCCCAGGAGGT 60.253 55.000 0.00 0.00 0.00 3.85
3366 3809 3.146847 CCCAGGAGGTACAAAGTCAAAC 58.853 50.000 0.00 0.00 0.00 2.93
3481 3924 2.850130 AGGGTGCCGGGTGTGTTA 60.850 61.111 2.18 0.00 0.00 2.41
3528 3971 7.497909 AGAGTCGTCAAATTGGTTCTTAAGAAA 59.502 33.333 19.30 5.04 35.58 2.52
3537 3980 8.727100 AATTGGTTCTTAAGAAAAATCCTCCT 57.273 30.769 19.30 5.21 35.58 3.69
3549 3992 2.543067 ATCCTCCTGCTTGGTTCGCC 62.543 60.000 0.00 0.00 37.07 5.54
3555 3998 1.077787 TGCTTGGTTCGCCTATGGG 60.078 57.895 0.00 0.00 38.36 4.00
3888 4333 4.823790 ATTTGTGGTTTCTCGTGTTACC 57.176 40.909 0.00 0.00 0.00 2.85
3901 4346 2.537401 GTGTTACCGTCATAGGTGAGC 58.463 52.381 0.00 0.00 45.54 4.26
3947 4392 0.242017 GTGCAGCACCCTCAATTGTC 59.758 55.000 15.27 0.00 0.00 3.18
4077 4531 5.708697 CCATAATGGCTATTCTTCATGCAGA 59.291 40.000 0.00 0.00 0.00 4.26
4084 4539 5.049543 GGCTATTCTTCATGCAGATTGAGTC 60.050 44.000 0.00 0.00 0.00 3.36
4134 4589 2.898729 ATAAGTCTGGGATCACAGCG 57.101 50.000 20.74 0.00 38.36 5.18
4184 4640 4.453478 TGTCAGAAATGCTGCTAACTGAAG 59.547 41.667 15.85 0.00 44.52 3.02
4226 4682 5.563475 GCAGCTCAAACATCTTGAAAGCTTA 60.563 40.000 0.00 0.00 30.61 3.09
4250 4787 0.388134 GTGCGCGTGGTCTTCTTCTA 60.388 55.000 8.43 0.00 0.00 2.10
4410 4947 9.996554 TTCTCTTTTCTTTTCTGTTTTCCTTTT 57.003 25.926 0.00 0.00 0.00 2.27
4418 4955 9.771534 TCTTTTCTGTTTTCCTTTTTCTTTTCA 57.228 25.926 0.00 0.00 0.00 2.69
4486 5023 9.844790 TCATGAGTATTTTGTGAATTCATGAAC 57.155 29.630 11.07 0.00 43.56 3.18
4570 5107 6.532365 TTTTATCAAACGGCCAACATTTTC 57.468 33.333 2.24 0.00 0.00 2.29
4576 5113 3.378911 ACGGCCAACATTTTCGAAATT 57.621 38.095 12.12 5.37 0.00 1.82
4628 5165 4.345859 TTTTTCGATCACTAGGGTGTGT 57.654 40.909 0.00 0.00 43.41 3.72
4629 5166 4.345859 TTTTCGATCACTAGGGTGTGTT 57.654 40.909 0.00 0.00 43.41 3.32
4630 5167 4.345859 TTTCGATCACTAGGGTGTGTTT 57.654 40.909 0.00 0.00 43.41 2.83
4631 5168 3.313012 TCGATCACTAGGGTGTGTTTG 57.687 47.619 0.00 0.00 43.41 2.93
4632 5169 2.028476 TCGATCACTAGGGTGTGTTTGG 60.028 50.000 0.00 0.00 43.41 3.28
4633 5170 2.289444 CGATCACTAGGGTGTGTTTGGT 60.289 50.000 0.00 0.00 43.41 3.67
4634 5171 3.056393 CGATCACTAGGGTGTGTTTGGTA 60.056 47.826 0.00 0.00 43.41 3.25
4635 5172 4.504858 GATCACTAGGGTGTGTTTGGTAG 58.495 47.826 0.00 0.00 43.41 3.18
4636 5173 2.038033 TCACTAGGGTGTGTTTGGTAGC 59.962 50.000 0.00 0.00 43.41 3.58
4637 5174 2.038557 CACTAGGGTGTGTTTGGTAGCT 59.961 50.000 0.00 0.00 38.54 3.32
4638 5175 2.038557 ACTAGGGTGTGTTTGGTAGCTG 59.961 50.000 0.00 0.00 0.00 4.24
4639 5176 0.843984 AGGGTGTGTTTGGTAGCTGT 59.156 50.000 0.00 0.00 0.00 4.40
4640 5177 1.214424 AGGGTGTGTTTGGTAGCTGTT 59.786 47.619 0.00 0.00 0.00 3.16
4641 5178 1.607148 GGGTGTGTTTGGTAGCTGTTC 59.393 52.381 0.00 0.00 0.00 3.18
4642 5179 1.607148 GGTGTGTTTGGTAGCTGTTCC 59.393 52.381 0.00 0.00 0.00 3.62
4643 5180 1.607148 GTGTGTTTGGTAGCTGTTCCC 59.393 52.381 0.00 0.00 0.00 3.97
4644 5181 1.213182 TGTGTTTGGTAGCTGTTCCCA 59.787 47.619 0.00 0.00 0.00 4.37
4645 5182 1.607148 GTGTTTGGTAGCTGTTCCCAC 59.393 52.381 0.00 0.00 0.00 4.61
4646 5183 1.244816 GTTTGGTAGCTGTTCCCACC 58.755 55.000 0.00 0.00 0.00 4.61
4647 5184 0.111639 TTTGGTAGCTGTTCCCACCC 59.888 55.000 0.00 0.00 0.00 4.61
4648 5185 0.770557 TTGGTAGCTGTTCCCACCCT 60.771 55.000 0.00 0.00 0.00 4.34
4649 5186 0.117541 TGGTAGCTGTTCCCACCCTA 59.882 55.000 0.00 0.00 0.00 3.53
4650 5187 0.831307 GGTAGCTGTTCCCACCCTAG 59.169 60.000 0.00 0.00 0.00 3.02
4651 5188 0.178301 GTAGCTGTTCCCACCCTAGC 59.822 60.000 0.00 0.00 34.71 3.42
4652 5189 0.252513 TAGCTGTTCCCACCCTAGCA 60.253 55.000 0.00 0.00 36.87 3.49
4653 5190 0.916358 AGCTGTTCCCACCCTAGCAT 60.916 55.000 0.00 0.00 36.87 3.79
4654 5191 0.837272 GCTGTTCCCACCCTAGCATA 59.163 55.000 0.00 0.00 34.64 3.14
4655 5192 1.202698 GCTGTTCCCACCCTAGCATAG 60.203 57.143 0.00 0.00 38.80 2.23
4656 5193 2.119495 CTGTTCCCACCCTAGCATAGT 58.881 52.381 0.00 0.00 36.82 2.12
4657 5194 2.505819 CTGTTCCCACCCTAGCATAGTT 59.494 50.000 0.00 0.00 36.82 2.24
4658 5195 2.238646 TGTTCCCACCCTAGCATAGTTG 59.761 50.000 0.00 0.00 36.82 3.16
4659 5196 2.238898 GTTCCCACCCTAGCATAGTTGT 59.761 50.000 0.00 0.00 36.82 3.32
4660 5197 2.557869 TCCCACCCTAGCATAGTTGTT 58.442 47.619 0.00 0.00 36.82 2.83
4661 5198 2.504175 TCCCACCCTAGCATAGTTGTTC 59.496 50.000 0.00 0.00 36.82 3.18
4662 5199 2.421529 CCCACCCTAGCATAGTTGTTCC 60.422 54.545 0.00 0.00 36.82 3.62
4663 5200 2.421529 CCACCCTAGCATAGTTGTTCCC 60.422 54.545 0.00 0.00 36.82 3.97
4664 5201 2.238646 CACCCTAGCATAGTTGTTCCCA 59.761 50.000 0.00 0.00 36.82 4.37
4665 5202 3.117888 CACCCTAGCATAGTTGTTCCCAT 60.118 47.826 0.00 0.00 36.82 4.00
4666 5203 3.527665 ACCCTAGCATAGTTGTTCCCATT 59.472 43.478 0.00 0.00 36.82 3.16
4667 5204 4.017499 ACCCTAGCATAGTTGTTCCCATTT 60.017 41.667 0.00 0.00 36.82 2.32
4668 5205 4.339247 CCCTAGCATAGTTGTTCCCATTTG 59.661 45.833 0.00 0.00 36.82 2.32
4669 5206 5.192927 CCTAGCATAGTTGTTCCCATTTGA 58.807 41.667 0.00 0.00 36.82 2.69
4670 5207 5.297776 CCTAGCATAGTTGTTCCCATTTGAG 59.702 44.000 0.00 0.00 36.82 3.02
4671 5208 4.922206 AGCATAGTTGTTCCCATTTGAGA 58.078 39.130 0.00 0.00 0.00 3.27
4672 5209 4.702131 AGCATAGTTGTTCCCATTTGAGAC 59.298 41.667 0.00 0.00 0.00 3.36
4673 5210 4.458989 GCATAGTTGTTCCCATTTGAGACA 59.541 41.667 0.00 0.00 0.00 3.41
4674 5211 5.126061 GCATAGTTGTTCCCATTTGAGACAT 59.874 40.000 0.00 0.00 0.00 3.06
4675 5212 6.558009 CATAGTTGTTCCCATTTGAGACATG 58.442 40.000 0.00 0.00 0.00 3.21
4676 5213 3.256631 AGTTGTTCCCATTTGAGACATGC 59.743 43.478 0.00 0.00 0.00 4.06
4677 5214 3.159213 TGTTCCCATTTGAGACATGCT 57.841 42.857 0.00 0.00 0.00 3.79
4678 5215 3.499338 TGTTCCCATTTGAGACATGCTT 58.501 40.909 0.00 0.00 0.00 3.91
4679 5216 4.661222 TGTTCCCATTTGAGACATGCTTA 58.339 39.130 0.00 0.00 0.00 3.09
4680 5217 4.701651 TGTTCCCATTTGAGACATGCTTAG 59.298 41.667 0.00 0.00 0.00 2.18
4681 5218 4.574674 TCCCATTTGAGACATGCTTAGT 57.425 40.909 0.00 0.00 0.00 2.24
4682 5219 4.517285 TCCCATTTGAGACATGCTTAGTC 58.483 43.478 0.00 0.00 36.26 2.59
4684 5221 5.425217 TCCCATTTGAGACATGCTTAGTCTA 59.575 40.000 6.31 0.00 45.79 2.59
4685 5222 5.757320 CCCATTTGAGACATGCTTAGTCTAG 59.243 44.000 6.31 0.00 45.79 2.43
4686 5223 6.407412 CCCATTTGAGACATGCTTAGTCTAGA 60.407 42.308 6.31 0.00 45.79 2.43
4687 5224 6.478344 CCATTTGAGACATGCTTAGTCTAGAC 59.522 42.308 15.41 15.41 45.79 2.59
4688 5225 6.590234 TTTGAGACATGCTTAGTCTAGACA 57.410 37.500 24.44 8.16 45.79 3.41
4689 5226 6.782082 TTGAGACATGCTTAGTCTAGACAT 57.218 37.500 24.44 12.01 45.79 3.06
4690 5227 6.141560 TGAGACATGCTTAGTCTAGACATG 57.858 41.667 24.44 19.21 45.79 3.21
4691 5228 4.942852 AGACATGCTTAGTCTAGACATGC 58.057 43.478 24.44 22.11 44.10 4.06
4692 5229 4.648762 AGACATGCTTAGTCTAGACATGCT 59.351 41.667 24.44 15.20 44.10 3.79
4693 5230 4.942852 ACATGCTTAGTCTAGACATGCTC 58.057 43.478 24.44 9.82 41.38 4.26
4694 5231 4.403752 ACATGCTTAGTCTAGACATGCTCA 59.596 41.667 24.44 14.61 41.38 4.26
4695 5232 4.645762 TGCTTAGTCTAGACATGCTCAG 57.354 45.455 24.44 11.06 0.00 3.35
4696 5233 4.019858 TGCTTAGTCTAGACATGCTCAGT 58.980 43.478 24.44 4.04 0.00 3.41
4697 5234 5.193679 TGCTTAGTCTAGACATGCTCAGTA 58.806 41.667 24.44 7.48 0.00 2.74
4698 5235 5.066634 TGCTTAGTCTAGACATGCTCAGTAC 59.933 44.000 24.44 3.72 0.00 2.73
4699 5236 5.066634 GCTTAGTCTAGACATGCTCAGTACA 59.933 44.000 24.44 0.00 0.00 2.90
4700 5237 6.238897 GCTTAGTCTAGACATGCTCAGTACAT 60.239 42.308 24.44 1.87 0.00 2.29
4707 5244 3.400505 CATGCTCAGTACATGCAACTG 57.599 47.619 18.36 18.36 44.66 3.16
4708 5245 1.159285 TGCTCAGTACATGCAACTGC 58.841 50.000 19.24 11.95 43.30 4.40
4757 5294 1.287730 CCACAGACGAGCAGAGCAAC 61.288 60.000 0.00 0.00 0.00 4.17
4762 5299 2.225019 CAGACGAGCAGAGCAACAAAAT 59.775 45.455 0.00 0.00 0.00 1.82
4775 5312 3.237433 GCAACAAAATCGTATAACAGCGC 59.763 43.478 0.00 0.00 0.00 5.92
4776 5313 4.399112 CAACAAAATCGTATAACAGCGCA 58.601 39.130 11.47 0.00 0.00 6.09
4780 5317 4.671880 AAATCGTATAACAGCGCACAAA 57.328 36.364 11.47 0.00 0.00 2.83
4818 5355 5.411669 AGCGTATCCAAAAGATTCGAACTTT 59.588 36.000 15.47 15.47 45.60 2.66
4850 5387 5.419471 ACTTGAACCAGTGGACTCTAGTATC 59.581 44.000 18.40 0.60 29.35 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 4.534500 ACAGGTCACAGTATTCCCAATACA 59.466 41.667 8.69 0.00 44.87 2.29
123 128 4.878397 ACTATTGAGTGATTGCAACTAGCC 59.122 41.667 0.00 0.00 37.12 3.93
186 191 2.477176 GCTGGCCACAACACACGAA 61.477 57.895 0.00 0.00 0.00 3.85
228 244 2.486982 GCTGATTTGCTGCTCTTCTTGA 59.513 45.455 0.00 0.00 38.32 3.02
357 373 1.226916 CTCTCTACGCTGGCTGCTG 60.227 63.158 14.58 10.17 40.11 4.41
390 406 3.889044 GGCTGCTCGATCGTCGGA 61.889 66.667 15.94 8.01 40.88 4.55
398 414 0.108186 CCTGTATGTTGGCTGCTCGA 60.108 55.000 0.00 0.00 0.00 4.04
399 415 1.091771 CCCTGTATGTTGGCTGCTCG 61.092 60.000 0.00 0.00 0.00 5.03
400 416 1.379642 GCCCTGTATGTTGGCTGCTC 61.380 60.000 0.00 0.00 42.01 4.26
401 417 1.379044 GCCCTGTATGTTGGCTGCT 60.379 57.895 0.00 0.00 42.01 4.24
402 418 1.678635 TGCCCTGTATGTTGGCTGC 60.679 57.895 0.00 0.00 45.56 5.25
426 442 0.536006 GTGCTGACCTTTGCCTCTGT 60.536 55.000 0.00 0.00 0.00 3.41
578 631 3.710326 AAAACTCGTGAAAGAAAGGCC 57.290 42.857 0.00 0.00 0.00 5.19
674 729 7.021790 GCTGCCACTAAAAACTACTATGTTTC 58.978 38.462 0.00 0.00 38.98 2.78
680 735 4.627284 TGGCTGCCACTAAAAACTACTA 57.373 40.909 19.30 0.00 0.00 1.82
681 736 3.502123 TGGCTGCCACTAAAAACTACT 57.498 42.857 19.30 0.00 0.00 2.57
682 737 4.202070 TGTTTGGCTGCCACTAAAAACTAC 60.202 41.667 23.30 8.63 30.78 2.73
794 854 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
795 855 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
796 856 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
797 857 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
798 858 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
799 859 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
800 860 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
801 861 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
802 862 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
803 863 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
804 864 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
805 865 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
806 866 9.219603 CTACAAAGTTGAGTCATCTATTTTGGA 57.780 33.333 14.35 8.18 40.00 3.53
807 867 9.003658 ACTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 6.59 40.00 3.28
835 895 8.603304 ACAGATGACCCAACTTTATACTAAAGT 58.397 33.333 6.49 6.49 41.82 2.66
836 896 9.449719 AACAGATGACCCAACTTTATACTAAAG 57.550 33.333 5.34 5.34 0.00 1.85
837 897 9.802039 AAACAGATGACCCAACTTTATACTAAA 57.198 29.630 0.00 0.00 0.00 1.85
838 898 9.802039 AAAACAGATGACCCAACTTTATACTAA 57.198 29.630 0.00 0.00 0.00 2.24
839 899 9.226606 CAAAACAGATGACCCAACTTTATACTA 57.773 33.333 0.00 0.00 0.00 1.82
840 900 7.942341 TCAAAACAGATGACCCAACTTTATACT 59.058 33.333 0.00 0.00 0.00 2.12
841 901 8.106247 TCAAAACAGATGACCCAACTTTATAC 57.894 34.615 0.00 0.00 0.00 1.47
842 902 8.698973 TTCAAAACAGATGACCCAACTTTATA 57.301 30.769 0.00 0.00 0.00 0.98
843 903 7.595819 TTCAAAACAGATGACCCAACTTTAT 57.404 32.000 0.00 0.00 0.00 1.40
844 904 7.262048 GTTTCAAAACAGATGACCCAACTTTA 58.738 34.615 0.81 0.00 38.74 1.85
845 905 5.930837 TTCAAAACAGATGACCCAACTTT 57.069 34.783 0.00 0.00 0.00 2.66
846 906 5.660460 GTTTCAAAACAGATGACCCAACTT 58.340 37.500 0.81 0.00 38.74 2.66
847 907 4.202010 CGTTTCAAAACAGATGACCCAACT 60.202 41.667 6.45 0.00 38.81 3.16
848 908 4.041723 CGTTTCAAAACAGATGACCCAAC 58.958 43.478 6.45 0.00 38.81 3.77
849 909 3.067461 CCGTTTCAAAACAGATGACCCAA 59.933 43.478 6.45 0.00 38.81 4.12
850 910 2.621055 CCGTTTCAAAACAGATGACCCA 59.379 45.455 6.45 0.00 38.81 4.51
851 911 2.882137 TCCGTTTCAAAACAGATGACCC 59.118 45.455 6.45 0.00 38.81 4.46
852 912 3.058224 CCTCCGTTTCAAAACAGATGACC 60.058 47.826 6.45 0.00 38.81 4.02
853 913 3.058224 CCCTCCGTTTCAAAACAGATGAC 60.058 47.826 6.45 0.00 38.81 3.06
854 914 3.146066 CCCTCCGTTTCAAAACAGATGA 58.854 45.455 6.45 0.00 38.81 2.92
855 915 3.146066 TCCCTCCGTTTCAAAACAGATG 58.854 45.455 6.45 0.00 38.81 2.90
856 916 3.181443 ACTCCCTCCGTTTCAAAACAGAT 60.181 43.478 6.45 0.00 38.81 2.90
857 917 2.171870 ACTCCCTCCGTTTCAAAACAGA 59.828 45.455 6.45 0.00 38.81 3.41
858 918 2.572290 ACTCCCTCCGTTTCAAAACAG 58.428 47.619 6.45 0.00 38.81 3.16
859 919 2.721425 ACTCCCTCCGTTTCAAAACA 57.279 45.000 6.45 0.00 38.81 2.83
860 920 6.806388 TTTATACTCCCTCCGTTTCAAAAC 57.194 37.500 0.00 0.00 35.59 2.43
861 921 7.820578 TTTTTATACTCCCTCCGTTTCAAAA 57.179 32.000 0.00 0.00 0.00 2.44
884 944 1.001815 CGTGGCCTTGTCGATGTTTTT 60.002 47.619 3.32 0.00 0.00 1.94
885 945 0.591170 CGTGGCCTTGTCGATGTTTT 59.409 50.000 3.32 0.00 0.00 2.43
886 946 0.534203 ACGTGGCCTTGTCGATGTTT 60.534 50.000 3.32 0.00 0.00 2.83
887 947 0.534203 AACGTGGCCTTGTCGATGTT 60.534 50.000 3.32 0.00 0.00 2.71
888 948 1.070786 AACGTGGCCTTGTCGATGT 59.929 52.632 3.32 0.00 0.00 3.06
889 949 1.227999 ACAACGTGGCCTTGTCGATG 61.228 55.000 3.32 11.01 34.52 3.84
890 950 0.534203 AACAACGTGGCCTTGTCGAT 60.534 50.000 9.12 0.00 30.34 3.59
891 951 1.153329 AACAACGTGGCCTTGTCGA 60.153 52.632 9.12 0.00 30.34 4.20
892 952 1.010125 CAACAACGTGGCCTTGTCG 60.010 57.895 9.12 8.61 30.34 4.35
893 953 0.951558 ATCAACAACGTGGCCTTGTC 59.048 50.000 9.12 0.00 30.34 3.18
894 954 2.264005 TATCAACAACGTGGCCTTGT 57.736 45.000 3.32 3.19 33.09 3.16
895 955 3.634568 TTTATCAACAACGTGGCCTTG 57.365 42.857 3.32 2.41 0.00 3.61
896 956 4.398044 CCTATTTATCAACAACGTGGCCTT 59.602 41.667 3.32 0.00 0.00 4.35
897 957 3.945285 CCTATTTATCAACAACGTGGCCT 59.055 43.478 3.32 0.00 0.00 5.19
898 958 3.488553 GCCTATTTATCAACAACGTGGCC 60.489 47.826 0.00 0.00 0.00 5.36
906 966 6.126409 AGGATTTTCCGCCTATTTATCAACA 58.874 36.000 0.00 0.00 42.75 3.33
919 979 1.602377 CCCATAACGAGGATTTTCCGC 59.398 52.381 0.00 0.00 42.75 5.54
927 988 1.683025 TCGTGGCCCATAACGAGGA 60.683 57.895 11.65 0.00 43.40 3.71
930 991 2.182284 CGTCGTGGCCCATAACGA 59.818 61.111 11.65 11.65 45.86 3.85
931 992 3.560278 GCGTCGTGGCCCATAACG 61.560 66.667 14.39 14.39 41.11 3.18
982 1050 0.041386 GTAGTGGGAGTCTGGGAGGT 59.959 60.000 0.00 0.00 0.00 3.85
1006 1074 2.740447 CCCGTTTCCTTTGCAGTACTAC 59.260 50.000 0.00 0.00 0.00 2.73
1009 1077 1.886886 TCCCGTTTCCTTTGCAGTAC 58.113 50.000 0.00 0.00 0.00 2.73
1012 1080 3.066760 GGATATTCCCGTTTCCTTTGCAG 59.933 47.826 0.00 0.00 0.00 4.41
1014 1082 3.710326 GGATATTCCCGTTTCCTTTGC 57.290 47.619 0.00 0.00 0.00 3.68
1507 1583 0.026803 GGACGTCGCAATCATCAAGC 59.973 55.000 9.92 0.00 0.00 4.01
1522 1598 5.838531 AATCTTGTCTACCTTAGAGGACG 57.161 43.478 0.07 0.00 37.67 4.79
1544 1620 8.108999 TGAATCTGTTAGAATCCAGAATCCAAA 58.891 33.333 0.00 0.00 40.81 3.28
1561 1637 6.757947 CACTTTTGTTTCACCATGAATCTGTT 59.242 34.615 0.00 0.00 36.11 3.16
1585 1661 8.086522 GCCGTAGATAGATCCAACTATAAAACA 58.913 37.037 0.00 0.00 33.85 2.83
1703 1781 7.791029 TCTGGACATATACTACATTTGAAGCA 58.209 34.615 0.00 0.00 0.00 3.91
1716 1794 7.777095 ACTTCTCAAGTCTTCTGGACATATAC 58.223 38.462 0.00 0.00 46.72 1.47
1717 1795 7.962995 ACTTCTCAAGTCTTCTGGACATATA 57.037 36.000 0.00 0.00 46.72 0.86
1718 1796 6.865834 ACTTCTCAAGTCTTCTGGACATAT 57.134 37.500 0.00 0.00 46.72 1.78
1724 1802 3.256136 ACCGTACTTCTCAAGTCTTCTGG 59.744 47.826 0.00 0.00 41.77 3.86
1737 1815 5.467902 CTGACTACAGTCTACCGTACTTC 57.532 47.826 10.55 0.00 44.99 3.01
1787 1865 6.910536 ATGTGATTCGTTAAATCTCAGTCC 57.089 37.500 8.08 0.00 45.83 3.85
1959 2038 7.607991 GGGACAAGAGATATTCTTTGAAAGACA 59.392 37.037 7.21 0.00 43.68 3.41
2043 2125 2.021380 CGCCGTTAACATCGCAGC 59.979 61.111 6.39 0.00 0.00 5.25
2059 2141 1.533625 TTTCAATTGCCTCCCAGACG 58.466 50.000 0.00 0.00 0.00 4.18
2094 2176 0.176680 CATCCGTGGGAAGAGACAGG 59.823 60.000 0.00 0.00 34.34 4.00
2103 2185 1.816835 GACGATATAGCATCCGTGGGA 59.183 52.381 0.00 0.00 35.22 4.37
2108 2201 5.692204 GGATTAATGGACGATATAGCATCCG 59.308 44.000 0.00 0.00 33.63 4.18
2109 2202 6.703607 CAGGATTAATGGACGATATAGCATCC 59.296 42.308 0.00 0.00 0.00 3.51
2110 2203 7.223582 CACAGGATTAATGGACGATATAGCATC 59.776 40.741 0.00 0.00 0.00 3.91
2111 2204 7.044181 CACAGGATTAATGGACGATATAGCAT 58.956 38.462 0.00 0.00 0.00 3.79
2112 2205 6.210584 TCACAGGATTAATGGACGATATAGCA 59.789 38.462 0.00 0.00 0.00 3.49
2113 2206 6.631016 TCACAGGATTAATGGACGATATAGC 58.369 40.000 0.00 0.00 0.00 2.97
2116 2209 9.436957 GTTTATCACAGGATTAATGGACGATAT 57.563 33.333 0.00 0.00 34.89 1.63
2117 2210 8.425703 TGTTTATCACAGGATTAATGGACGATA 58.574 33.333 0.00 0.00 34.89 2.92
2118 2211 7.279615 TGTTTATCACAGGATTAATGGACGAT 58.720 34.615 0.00 0.00 34.89 3.73
2121 2214 8.225603 ACATGTTTATCACAGGATTAATGGAC 57.774 34.615 0.00 0.00 39.73 4.02
2123 2216 8.455903 AGACATGTTTATCACAGGATTAATGG 57.544 34.615 0.00 0.00 39.73 3.16
2168 2262 5.525012 GGCCTTGCTGAATTATTTTCCAATC 59.475 40.000 0.00 0.00 0.00 2.67
2178 2272 1.272092 ACTGCTGGCCTTGCTGAATTA 60.272 47.619 25.55 6.07 34.27 1.40
2216 2310 5.105554 TCACTAAGCTTTCAGATGAGAGACC 60.106 44.000 3.20 0.00 0.00 3.85
2243 2337 8.682710 AGTTGTAAAGTACACACATTCAATTGT 58.317 29.630 5.13 0.00 38.63 2.71
2247 2341 8.270080 TGAAGTTGTAAAGTACACACATTCAA 57.730 30.769 0.00 0.00 38.63 2.69
2292 2418 7.327032 GGAACAGAAGCATTAAAAGATCAACAC 59.673 37.037 0.00 0.00 0.00 3.32
2429 2702 4.083110 CCTGCATGTGAAAAGACAGGTAAG 60.083 45.833 0.00 0.00 39.85 2.34
2582 2855 3.528594 GCTCAATGCATGAAGAGCG 57.471 52.632 24.28 6.25 43.27 5.03
2631 2904 6.017109 GGAGAGCACAAAATCACTCTAACAAA 60.017 38.462 0.00 0.00 39.55 2.83
2638 2911 3.063180 CGATGGAGAGCACAAAATCACTC 59.937 47.826 0.00 0.00 0.00 3.51
2712 2989 7.141363 GCATCCATAAGTAATGTTTCACCATC 58.859 38.462 0.00 0.00 33.34 3.51
2774 3055 5.336929 GGGACTAAAGGTTTGTTGTTGTTGT 60.337 40.000 0.00 0.00 0.00 3.32
2775 3056 5.106442 GGGACTAAAGGTTTGTTGTTGTTG 58.894 41.667 0.00 0.00 0.00 3.33
2776 3057 4.773149 TGGGACTAAAGGTTTGTTGTTGTT 59.227 37.500 0.00 0.00 0.00 2.83
2777 3058 4.345854 TGGGACTAAAGGTTTGTTGTTGT 58.654 39.130 0.00 0.00 0.00 3.32
2778 3059 4.993029 TGGGACTAAAGGTTTGTTGTTG 57.007 40.909 0.00 0.00 0.00 3.33
2779 3060 5.246429 TGTTTGGGACTAAAGGTTTGTTGTT 59.754 36.000 0.00 0.00 0.00 2.83
2780 3061 4.773149 TGTTTGGGACTAAAGGTTTGTTGT 59.227 37.500 0.00 0.00 0.00 3.32
2781 3062 5.331876 TGTTTGGGACTAAAGGTTTGTTG 57.668 39.130 0.00 0.00 0.00 3.33
2782 3063 5.482526 ACTTGTTTGGGACTAAAGGTTTGTT 59.517 36.000 0.00 0.00 0.00 2.83
2783 3064 5.020795 ACTTGTTTGGGACTAAAGGTTTGT 58.979 37.500 0.00 0.00 0.00 2.83
2784 3065 5.592104 ACTTGTTTGGGACTAAAGGTTTG 57.408 39.130 0.00 0.00 0.00 2.93
2785 3066 5.972935 CAACTTGTTTGGGACTAAAGGTTT 58.027 37.500 0.00 0.00 0.00 3.27
2786 3067 5.592104 CAACTTGTTTGGGACTAAAGGTT 57.408 39.130 0.00 0.00 0.00 3.50
2798 3079 1.069596 GCCTGCCCCAACTTGTTTG 59.930 57.895 0.00 0.00 34.63 2.93
2799 3080 0.187361 TAGCCTGCCCCAACTTGTTT 59.813 50.000 0.00 0.00 0.00 2.83
2800 3081 0.251341 CTAGCCTGCCCCAACTTGTT 60.251 55.000 0.00 0.00 0.00 2.83
2801 3082 1.133809 TCTAGCCTGCCCCAACTTGT 61.134 55.000 0.00 0.00 0.00 3.16
2802 3083 0.393537 CTCTAGCCTGCCCCAACTTG 60.394 60.000 0.00 0.00 0.00 3.16
2803 3084 1.566298 CCTCTAGCCTGCCCCAACTT 61.566 60.000 0.00 0.00 0.00 2.66
2804 3085 1.997874 CCTCTAGCCTGCCCCAACT 60.998 63.158 0.00 0.00 0.00 3.16
2805 3086 2.301738 ACCTCTAGCCTGCCCCAAC 61.302 63.158 0.00 0.00 0.00 3.77
2806 3087 2.124996 ACCTCTAGCCTGCCCCAA 59.875 61.111 0.00 0.00 0.00 4.12
2807 3088 2.688666 CACCTCTAGCCTGCCCCA 60.689 66.667 0.00 0.00 0.00 4.96
2808 3089 1.562672 TTTCACCTCTAGCCTGCCCC 61.563 60.000 0.00 0.00 0.00 5.80
2809 3090 0.393132 GTTTCACCTCTAGCCTGCCC 60.393 60.000 0.00 0.00 0.00 5.36
2810 3091 0.393132 GGTTTCACCTCTAGCCTGCC 60.393 60.000 0.00 0.00 34.73 4.85
2811 3092 0.393132 GGGTTTCACCTCTAGCCTGC 60.393 60.000 0.00 0.00 38.64 4.85
2812 3093 0.984230 TGGGTTTCACCTCTAGCCTG 59.016 55.000 0.00 0.00 38.64 4.85
2813 3094 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2814 3095 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
2815 3096 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
2816 3097 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
2817 3098 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
2818 3099 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
2819 3100 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
2820 3101 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
2821 3102 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
2822 3103 2.540101 CGCGAGATCTTATGGGTTTCAC 59.460 50.000 0.00 0.00 0.00 3.18
2823 3104 2.429250 TCGCGAGATCTTATGGGTTTCA 59.571 45.455 3.71 0.00 33.31 2.69
2824 3105 2.795470 GTCGCGAGATCTTATGGGTTTC 59.205 50.000 10.24 0.00 45.19 2.78
2825 3106 2.483188 GGTCGCGAGATCTTATGGGTTT 60.483 50.000 10.24 0.00 45.19 3.27
2826 3107 1.068741 GGTCGCGAGATCTTATGGGTT 59.931 52.381 10.24 0.00 45.19 4.11
2827 3108 0.674534 GGTCGCGAGATCTTATGGGT 59.325 55.000 10.24 0.00 45.19 4.51
2828 3109 0.673985 TGGTCGCGAGATCTTATGGG 59.326 55.000 10.24 0.00 43.23 4.00
2829 3110 2.128035 GTTGGTCGCGAGATCTTATGG 58.872 52.381 10.24 0.00 43.23 2.74
2830 3111 3.046390 GAGTTGGTCGCGAGATCTTATG 58.954 50.000 10.24 0.00 43.23 1.90
2831 3112 2.688446 TGAGTTGGTCGCGAGATCTTAT 59.312 45.455 10.24 0.00 43.23 1.73
2832 3113 2.089201 TGAGTTGGTCGCGAGATCTTA 58.911 47.619 10.24 0.00 43.23 2.10
2833 3114 0.888619 TGAGTTGGTCGCGAGATCTT 59.111 50.000 10.24 0.00 43.23 2.40
2834 3115 1.107114 ATGAGTTGGTCGCGAGATCT 58.893 50.000 10.24 5.84 43.23 2.75
2835 3116 1.203928 CATGAGTTGGTCGCGAGATC 58.796 55.000 10.24 2.63 45.19 2.75
2836 3117 0.179100 CCATGAGTTGGTCGCGAGAT 60.179 55.000 10.24 0.00 45.19 2.75
2837 3118 1.215382 CCATGAGTTGGTCGCGAGA 59.785 57.895 10.24 0.00 40.99 4.04
2838 3119 3.786101 CCATGAGTTGGTCGCGAG 58.214 61.111 10.24 0.00 40.99 5.03
2846 3127 3.581755 CATTTGCCAGAACCATGAGTTG 58.418 45.455 0.00 0.00 39.40 3.16
2847 3128 2.564062 CCATTTGCCAGAACCATGAGTT 59.436 45.455 0.00 0.00 43.07 3.01
2848 3129 2.173519 CCATTTGCCAGAACCATGAGT 58.826 47.619 0.00 0.00 0.00 3.41
2849 3130 2.449464 TCCATTTGCCAGAACCATGAG 58.551 47.619 0.00 0.00 0.00 2.90
2850 3131 2.601240 TCCATTTGCCAGAACCATGA 57.399 45.000 0.00 0.00 0.00 3.07
2851 3132 3.243636 GCTATCCATTTGCCAGAACCATG 60.244 47.826 0.00 0.00 0.00 3.66
2852 3133 2.961062 GCTATCCATTTGCCAGAACCAT 59.039 45.455 0.00 0.00 0.00 3.55
2853 3134 2.291475 TGCTATCCATTTGCCAGAACCA 60.291 45.455 0.00 0.00 0.00 3.67
2854 3135 2.378038 TGCTATCCATTTGCCAGAACC 58.622 47.619 0.00 0.00 0.00 3.62
2855 3136 3.736126 GCTTGCTATCCATTTGCCAGAAC 60.736 47.826 0.00 0.00 0.00 3.01
2856 3137 2.428171 GCTTGCTATCCATTTGCCAGAA 59.572 45.455 0.00 0.00 0.00 3.02
2857 3138 2.026641 GCTTGCTATCCATTTGCCAGA 58.973 47.619 0.00 0.00 0.00 3.86
2858 3139 2.029623 AGCTTGCTATCCATTTGCCAG 58.970 47.619 0.00 0.00 0.00 4.85
2859 3140 2.148446 AGCTTGCTATCCATTTGCCA 57.852 45.000 0.00 0.00 0.00 4.92
2860 3141 2.223900 GGAAGCTTGCTATCCATTTGCC 60.224 50.000 11.19 0.00 33.30 4.52
2861 3142 2.428171 TGGAAGCTTGCTATCCATTTGC 59.572 45.455 19.34 0.00 38.30 3.68
2866 3147 1.064537 TGCATGGAAGCTTGCTATCCA 60.065 47.619 19.34 20.23 46.60 3.41
2867 3148 1.336125 GTGCATGGAAGCTTGCTATCC 59.664 52.381 19.34 6.99 39.60 2.59
2868 3149 1.336125 GGTGCATGGAAGCTTGCTATC 59.664 52.381 19.34 8.04 39.60 2.08
2869 3150 1.396653 GGTGCATGGAAGCTTGCTAT 58.603 50.000 19.34 8.14 39.60 2.97
2870 3151 0.680921 GGGTGCATGGAAGCTTGCTA 60.681 55.000 19.34 6.07 39.60 3.49
2871 3152 1.980772 GGGTGCATGGAAGCTTGCT 60.981 57.895 19.34 1.86 39.60 3.91
2872 3153 2.575461 GGGTGCATGGAAGCTTGC 59.425 61.111 11.58 11.58 39.33 4.01
2873 3154 1.304713 AGGGGTGCATGGAAGCTTG 60.305 57.895 2.10 0.00 34.99 4.01
2874 3155 1.304713 CAGGGGTGCATGGAAGCTT 60.305 57.895 0.00 0.00 34.99 3.74
2875 3156 2.357836 CAGGGGTGCATGGAAGCT 59.642 61.111 0.00 0.00 34.99 3.74
2876 3157 2.036256 ACAGGGGTGCATGGAAGC 59.964 61.111 0.00 0.00 0.00 3.86
2877 3158 1.379044 GGACAGGGGTGCATGGAAG 60.379 63.158 0.00 0.00 35.12 3.46
2878 3159 2.159490 TGGACAGGGGTGCATGGAA 61.159 57.895 0.00 0.00 40.73 3.53
2879 3160 2.531428 TGGACAGGGGTGCATGGA 60.531 61.111 0.00 0.00 40.73 3.41
2884 3165 2.615227 CTAGCCATGGACAGGGGTGC 62.615 65.000 18.40 0.00 43.36 5.01
2885 3166 1.274703 ACTAGCCATGGACAGGGGTG 61.275 60.000 18.40 9.72 43.36 4.61
2886 3167 0.550147 AACTAGCCATGGACAGGGGT 60.550 55.000 18.40 12.50 45.59 4.95
2887 3168 0.181350 GAACTAGCCATGGACAGGGG 59.819 60.000 18.40 0.95 31.86 4.79
2888 3169 1.207791 AGAACTAGCCATGGACAGGG 58.792 55.000 18.40 0.00 34.91 4.45
2889 3170 3.012518 CAAAGAACTAGCCATGGACAGG 58.987 50.000 18.40 4.37 0.00 4.00
2890 3171 3.012518 CCAAAGAACTAGCCATGGACAG 58.987 50.000 18.40 13.68 0.00 3.51
2891 3172 2.375174 ACCAAAGAACTAGCCATGGACA 59.625 45.455 18.40 0.00 0.00 4.02
2892 3173 2.749621 CACCAAAGAACTAGCCATGGAC 59.250 50.000 18.40 7.03 0.00 4.02
2893 3174 2.642311 TCACCAAAGAACTAGCCATGGA 59.358 45.455 18.40 0.00 0.00 3.41
2894 3175 3.071874 TCACCAAAGAACTAGCCATGG 57.928 47.619 7.63 7.63 0.00 3.66
2895 3176 6.016777 GGAATATCACCAAAGAACTAGCCATG 60.017 42.308 0.00 0.00 0.00 3.66
2896 3177 6.064717 GGAATATCACCAAAGAACTAGCCAT 58.935 40.000 0.00 0.00 0.00 4.40
2897 3178 5.045213 TGGAATATCACCAAAGAACTAGCCA 60.045 40.000 0.00 0.00 34.25 4.75
2898 3179 5.437060 TGGAATATCACCAAAGAACTAGCC 58.563 41.667 0.00 0.00 34.25 3.93
2909 3190 6.101588 TCAGATGAAGGATTGGAATATCACCA 59.898 38.462 0.00 0.00 35.47 4.17
2910 3191 6.537355 TCAGATGAAGGATTGGAATATCACC 58.463 40.000 0.00 0.00 0.00 4.02
2911 3192 8.455903 TTTCAGATGAAGGATTGGAATATCAC 57.544 34.615 0.00 0.00 35.21 3.06
2912 3193 9.478238 TTTTTCAGATGAAGGATTGGAATATCA 57.522 29.630 0.00 0.00 35.21 2.15
2965 3247 9.907819 TCTATATTTCCCCCAAGTTAGATTAGA 57.092 33.333 0.00 0.00 0.00 2.10
3066 3509 7.172019 GCAATCATTTCCCCACATGATTAAATC 59.828 37.037 0.00 0.00 44.71 2.17
3067 3510 6.993902 GCAATCATTTCCCCACATGATTAAAT 59.006 34.615 0.00 0.00 44.71 1.40
3079 3522 3.091545 TCTGTCAAGCAATCATTTCCCC 58.908 45.455 0.00 0.00 0.00 4.81
3089 3532 3.799366 TCTTACGGTTTCTGTCAAGCAA 58.201 40.909 0.00 0.00 0.00 3.91
3092 3535 7.313646 TCTTAGATCTTACGGTTTCTGTCAAG 58.686 38.462 0.00 0.00 0.00 3.02
3119 3562 4.998671 TGTTGTATATGTTGCCATTGGG 57.001 40.909 4.53 0.00 32.29 4.12
3120 3563 6.489700 TCCTATGTTGTATATGTTGCCATTGG 59.510 38.462 0.00 0.00 32.29 3.16
3155 3598 8.977505 ACATGTGAAATTACAAAGGAAAAATCG 58.022 29.630 0.00 0.00 33.69 3.34
3194 3637 6.260050 CAGTAACAAGTTGAAAGAGCTAACCA 59.740 38.462 10.54 0.00 0.00 3.67
3200 3643 4.201910 TGTGCAGTAACAAGTTGAAAGAGC 60.202 41.667 10.54 8.43 0.00 4.09
3220 3663 8.969121 TGCATATTCAAAGAGTACAAAATGTG 57.031 30.769 0.00 0.00 0.00 3.21
3251 3694 6.605119 ACCAAGTTAGAATGGGAGATAATGG 58.395 40.000 0.00 0.00 41.17 3.16
3260 3703 7.343357 TCAAATACCTACCAAGTTAGAATGGG 58.657 38.462 0.00 0.00 41.17 4.00
3283 3726 6.778069 TCCACCCTGTAACAAATTAACAATCA 59.222 34.615 0.00 0.00 0.00 2.57
3284 3727 7.222000 TCCACCCTGTAACAAATTAACAATC 57.778 36.000 0.00 0.00 0.00 2.67
3288 3731 6.644248 AGTTCCACCCTGTAACAAATTAAC 57.356 37.500 0.00 0.00 0.00 2.01
3289 3732 8.219178 TCTTAGTTCCACCCTGTAACAAATTAA 58.781 33.333 0.00 0.00 0.00 1.40
3290 3733 7.747690 TCTTAGTTCCACCCTGTAACAAATTA 58.252 34.615 0.00 0.00 0.00 1.40
3291 3734 6.607019 TCTTAGTTCCACCCTGTAACAAATT 58.393 36.000 0.00 0.00 0.00 1.82
3292 3735 6.195600 TCTTAGTTCCACCCTGTAACAAAT 57.804 37.500 0.00 0.00 0.00 2.32
3293 3736 5.633655 TCTTAGTTCCACCCTGTAACAAA 57.366 39.130 0.00 0.00 0.00 2.83
3294 3737 5.633655 TTCTTAGTTCCACCCTGTAACAA 57.366 39.130 0.00 0.00 0.00 2.83
3295 3738 5.633655 TTTCTTAGTTCCACCCTGTAACA 57.366 39.130 0.00 0.00 0.00 2.41
3299 3742 5.304357 CCAAAATTTCTTAGTTCCACCCTGT 59.696 40.000 0.00 0.00 0.00 4.00
3354 3797 7.759489 ATTGCTTCCTATGTTTGACTTTGTA 57.241 32.000 0.00 0.00 0.00 2.41
3429 3872 2.354103 CCTGGCTCGAAGTGATTTCTCA 60.354 50.000 0.00 0.00 33.44 3.27
3481 3924 1.952296 CTTTGCAAGGTCTTCTGCTGT 59.048 47.619 0.00 0.00 0.00 4.40
3507 3950 8.699749 GGATTTTTCTTAAGAACCAATTTGACG 58.300 33.333 17.51 0.00 33.13 4.35
3528 3971 1.826385 CGAACCAAGCAGGAGGATTT 58.174 50.000 1.83 0.00 41.22 2.17
3537 3980 1.077787 CCCATAGGCGAACCAAGCA 60.078 57.895 0.00 0.00 39.06 3.91
3746 4191 7.042051 AGTGTGTGTACTCATGTATTGTGAAAC 60.042 37.037 0.24 0.00 37.35 2.78
3850 4295 9.724839 AACCACAAATTTCGGAATAATATTACG 57.275 29.630 11.17 11.17 0.00 3.18
3888 4333 2.467838 CACAGATGCTCACCTATGACG 58.532 52.381 0.00 0.00 0.00 4.35
3901 4346 8.447924 AGATTGAAGAATATGTTCCACAGATG 57.552 34.615 0.00 0.00 29.41 2.90
4084 4539 4.832266 AGATCCTCATTAGGCTGTAGTCAG 59.168 45.833 0.00 0.00 43.31 3.51
4134 4589 6.596497 TGATCCACCCTAAAAGAAACGTTATC 59.404 38.462 0.00 1.66 0.00 1.75
4184 4640 1.803366 GCAGGAGCCAGCCATATTGC 61.803 60.000 0.00 0.00 33.58 3.56
4226 4682 3.876589 AAGACCACGCGCACGGAAT 62.877 57.895 18.34 3.86 46.04 3.01
4398 4935 7.693536 GCAACATGAAAAGAAAAAGGAAAACAG 59.306 33.333 0.00 0.00 0.00 3.16
4482 5019 9.605275 TGGTTCACAATTTCAAAAATATGTTCA 57.395 25.926 0.00 0.00 0.00 3.18
4558 5095 6.367422 TGTTCATAATTTCGAAAATGTTGGCC 59.633 34.615 15.66 0.00 0.00 5.36
4617 5154 2.038557 CAGCTACCAAACACACCCTAGT 59.961 50.000 0.00 0.00 0.00 2.57
4618 5155 2.038557 ACAGCTACCAAACACACCCTAG 59.961 50.000 0.00 0.00 0.00 3.02
4619 5156 2.051692 ACAGCTACCAAACACACCCTA 58.948 47.619 0.00 0.00 0.00 3.53
4620 5157 0.843984 ACAGCTACCAAACACACCCT 59.156 50.000 0.00 0.00 0.00 4.34
4621 5158 1.607148 GAACAGCTACCAAACACACCC 59.393 52.381 0.00 0.00 0.00 4.61
4622 5159 1.607148 GGAACAGCTACCAAACACACC 59.393 52.381 0.00 0.00 0.00 4.16
4623 5160 1.607148 GGGAACAGCTACCAAACACAC 59.393 52.381 6.20 0.00 0.00 3.82
4624 5161 1.213182 TGGGAACAGCTACCAAACACA 59.787 47.619 6.20 0.00 35.01 3.72
4625 5162 1.607148 GTGGGAACAGCTACCAAACAC 59.393 52.381 6.20 0.00 44.46 3.32
4626 5163 1.975660 GTGGGAACAGCTACCAAACA 58.024 50.000 6.20 0.00 44.46 2.83
4636 5173 2.119495 ACTATGCTAGGGTGGGAACAG 58.881 52.381 0.00 0.00 44.46 3.16
4637 5174 2.238646 CAACTATGCTAGGGTGGGAACA 59.761 50.000 0.00 0.00 38.70 3.18
4638 5175 2.238898 ACAACTATGCTAGGGTGGGAAC 59.761 50.000 0.00 0.00 0.00 3.62
4639 5176 2.557869 ACAACTATGCTAGGGTGGGAA 58.442 47.619 0.00 0.00 0.00 3.97
4640 5177 2.263895 ACAACTATGCTAGGGTGGGA 57.736 50.000 0.00 0.00 0.00 4.37
4641 5178 2.421529 GGAACAACTATGCTAGGGTGGG 60.422 54.545 0.00 0.00 0.00 4.61
4642 5179 2.421529 GGGAACAACTATGCTAGGGTGG 60.422 54.545 0.00 0.00 0.00 4.61
4643 5180 2.238646 TGGGAACAACTATGCTAGGGTG 59.761 50.000 0.00 0.00 37.44 4.61
4644 5181 2.557869 TGGGAACAACTATGCTAGGGT 58.442 47.619 0.00 0.00 37.44 4.34
4657 5194 9.591238 AGACTAAGCATGTCTCAAATGGGAACA 62.591 40.741 0.00 0.00 42.34 3.18
4658 5195 4.702131 ACTAAGCATGTCTCAAATGGGAAC 59.298 41.667 0.00 0.00 0.00 3.62
4659 5196 4.922206 ACTAAGCATGTCTCAAATGGGAA 58.078 39.130 0.00 0.00 0.00 3.97
4660 5197 4.225942 AGACTAAGCATGTCTCAAATGGGA 59.774 41.667 0.00 0.00 40.35 4.37
4661 5198 4.521146 AGACTAAGCATGTCTCAAATGGG 58.479 43.478 0.00 0.00 40.35 4.00
4662 5199 6.478344 GTCTAGACTAAGCATGTCTCAAATGG 59.522 42.308 15.91 0.00 42.95 3.16
4663 5200 7.038048 TGTCTAGACTAAGCATGTCTCAAATG 58.962 38.462 23.01 0.00 42.95 2.32
4664 5201 7.175347 TGTCTAGACTAAGCATGTCTCAAAT 57.825 36.000 23.01 0.00 42.95 2.32
4665 5202 6.590234 TGTCTAGACTAAGCATGTCTCAAA 57.410 37.500 23.01 0.00 42.95 2.69
4666 5203 6.567959 CATGTCTAGACTAAGCATGTCTCAA 58.432 40.000 23.01 0.00 42.95 3.02
4667 5204 5.451103 GCATGTCTAGACTAAGCATGTCTCA 60.451 44.000 23.01 0.00 42.95 3.27
4668 5205 4.981674 GCATGTCTAGACTAAGCATGTCTC 59.018 45.833 23.01 3.26 42.95 3.36
4669 5206 4.648762 AGCATGTCTAGACTAAGCATGTCT 59.351 41.667 23.01 14.70 45.48 3.41
4670 5207 4.942852 AGCATGTCTAGACTAAGCATGTC 58.057 43.478 23.01 13.08 39.11 3.06
4671 5208 4.403752 TGAGCATGTCTAGACTAAGCATGT 59.596 41.667 23.01 9.00 39.11 3.21
4672 5209 4.941657 TGAGCATGTCTAGACTAAGCATG 58.058 43.478 23.01 17.61 39.68 4.06
4673 5210 4.648762 ACTGAGCATGTCTAGACTAAGCAT 59.351 41.667 23.01 13.03 0.00 3.79
4674 5211 4.019858 ACTGAGCATGTCTAGACTAAGCA 58.980 43.478 23.01 13.26 0.00 3.91
4675 5212 4.647424 ACTGAGCATGTCTAGACTAAGC 57.353 45.455 23.01 21.27 0.00 3.09
4676 5213 6.685527 TGTACTGAGCATGTCTAGACTAAG 57.314 41.667 23.01 13.53 0.00 2.18
4677 5214 6.460261 GCATGTACTGAGCATGTCTAGACTAA 60.460 42.308 23.01 4.87 43.93 2.24
4678 5215 5.009110 GCATGTACTGAGCATGTCTAGACTA 59.991 44.000 23.01 10.48 43.93 2.59
4679 5216 4.202101 GCATGTACTGAGCATGTCTAGACT 60.202 45.833 23.01 3.11 43.93 3.24
4680 5217 4.047822 GCATGTACTGAGCATGTCTAGAC 58.952 47.826 16.32 16.32 43.93 2.59
4681 5218 3.701040 TGCATGTACTGAGCATGTCTAGA 59.299 43.478 14.01 0.00 43.93 2.43
4682 5219 4.050852 TGCATGTACTGAGCATGTCTAG 57.949 45.455 14.01 0.00 43.93 2.43
4683 5220 4.081476 AGTTGCATGTACTGAGCATGTCTA 60.081 41.667 14.01 5.25 43.93 2.59
4684 5221 3.005554 GTTGCATGTACTGAGCATGTCT 58.994 45.455 14.01 0.00 43.93 3.41
4685 5222 3.005554 AGTTGCATGTACTGAGCATGTC 58.994 45.455 14.01 9.19 43.93 3.06
4686 5223 2.745821 CAGTTGCATGTACTGAGCATGT 59.254 45.455 19.33 0.00 44.52 3.21
4687 5224 2.477357 GCAGTTGCATGTACTGAGCATG 60.477 50.000 24.99 10.25 44.52 4.06
4688 5225 1.741706 GCAGTTGCATGTACTGAGCAT 59.258 47.619 24.99 0.00 44.52 3.79
4689 5226 1.159285 GCAGTTGCATGTACTGAGCA 58.841 50.000 24.99 1.37 44.52 4.26
4690 5227 3.984292 GCAGTTGCATGTACTGAGC 57.016 52.632 24.99 12.73 44.52 4.26
4703 5240 1.333619 CGCTACCAAACAACTGCAGTT 59.666 47.619 26.36 26.36 39.12 3.16
4704 5241 0.944386 CGCTACCAAACAACTGCAGT 59.056 50.000 15.25 15.25 0.00 4.40
4705 5242 0.385974 GCGCTACCAAACAACTGCAG 60.386 55.000 13.48 13.48 0.00 4.41
4706 5243 1.652012 GCGCTACCAAACAACTGCA 59.348 52.632 0.00 0.00 0.00 4.41
4707 5244 1.081442 GGCGCTACCAAACAACTGC 60.081 57.895 7.64 0.00 38.86 4.40
4708 5245 0.238289 CAGGCGCTACCAAACAACTG 59.762 55.000 7.64 0.00 43.14 3.16
4709 5246 0.889186 CCAGGCGCTACCAAACAACT 60.889 55.000 7.64 0.00 43.14 3.16
4710 5247 1.170290 ACCAGGCGCTACCAAACAAC 61.170 55.000 7.64 0.00 43.14 3.32
4711 5248 1.149627 ACCAGGCGCTACCAAACAA 59.850 52.632 7.64 0.00 43.14 2.83
4712 5249 1.599518 CACCAGGCGCTACCAAACA 60.600 57.895 7.64 0.00 43.14 2.83
4713 5250 2.332654 CCACCAGGCGCTACCAAAC 61.333 63.158 7.64 0.00 43.14 2.93
4714 5251 2.033448 CCACCAGGCGCTACCAAA 59.967 61.111 7.64 0.00 43.14 3.28
4715 5252 4.028490 CCCACCAGGCGCTACCAA 62.028 66.667 7.64 0.00 43.14 3.67
4757 5294 3.997276 TGTGCGCTGTTATACGATTTTG 58.003 40.909 9.73 0.00 0.00 2.44
4780 5317 4.339814 TGGATACGCTCTTTTTGGTGTTTT 59.660 37.500 0.00 0.00 42.51 2.43
4818 5355 3.890756 TCCACTGGTTCAAGTTACGTCTA 59.109 43.478 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.