Multiple sequence alignment - TraesCS2A01G337100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G337100 chr2A 100.000 2858 0 0 1 2858 570723213 570726070 0.000000e+00 5278.0
1 TraesCS2A01G337100 chr2A 93.296 179 10 2 2577 2754 570725679 570725856 2.180000e-66 263.0
2 TraesCS2A01G337100 chr2A 93.296 179 10 2 2467 2644 570725789 570725966 2.180000e-66 263.0
3 TraesCS2A01G337100 chr2A 100.000 29 0 0 1 29 570721988 570721960 1.000000e-03 54.7
4 TraesCS2A01G337100 chr2B 94.856 2119 77 18 665 2758 491355456 491353345 0.000000e+00 3280.0
5 TraesCS2A01G337100 chr2B 93.503 354 21 2 2467 2819 491353526 491353174 2.520000e-145 525.0
6 TraesCS2A01G337100 chr2B 94.536 183 8 2 2577 2758 491353636 491353455 6.030000e-72 281.0
7 TraesCS2A01G337100 chr2B 91.477 176 13 2 2470 2644 491353413 491353239 1.020000e-59 241.0
8 TraesCS2A01G337100 chr2B 94.521 73 3 1 2467 2539 491353306 491353235 8.370000e-21 111.0
9 TraesCS2A01G337100 chr2D 94.946 2117 65 15 763 2857 419052260 419050164 0.000000e+00 3278.0
10 TraesCS2A01G337100 chr2D 92.135 178 5 4 2577 2754 419050557 419050389 2.840000e-60 243.0
11 TraesCS2A01G337100 chr2D 91.061 179 14 2 2467 2644 419050456 419050279 1.020000e-59 241.0
12 TraesCS2A01G337100 chr2D 92.500 80 4 2 2460 2539 419050352 419050275 2.330000e-21 113.0
13 TraesCS2A01G337100 chr2D 85.294 68 2 5 2687 2754 419050557 419050498 2.380000e-06 63.9
14 TraesCS2A01G337100 chr6A 82.660 842 130 15 1006 1839 306047578 306046745 0.000000e+00 732.0
15 TraesCS2A01G337100 chr6D 82.423 842 132 15 1006 1839 237427474 237428307 0.000000e+00 721.0
16 TraesCS2A01G337100 chr6D 82.067 842 135 15 1006 1839 316825669 316824836 0.000000e+00 704.0
17 TraesCS2A01G337100 chr6B 82.304 842 133 15 1006 1839 364901730 364902563 0.000000e+00 715.0
18 TraesCS2A01G337100 chr6B 81.709 831 144 8 1006 1832 507620691 507621517 0.000000e+00 686.0
19 TraesCS2A01G337100 chr6B 86.559 372 42 7 27 393 40438382 40438750 1.230000e-108 403.0
20 TraesCS2A01G337100 chr3B 88.608 395 26 6 2103 2480 467900894 467900502 2.010000e-126 462.0
21 TraesCS2A01G337100 chr1D 88.949 371 31 7 27 393 415986766 415987130 1.560000e-122 449.0
22 TraesCS2A01G337100 chr4D 87.792 385 35 11 30 407 7921624 7922003 9.400000e-120 440.0
23 TraesCS2A01G337100 chr1A 87.366 372 41 6 26 393 535329240 535329609 3.400000e-114 422.0
24 TraesCS2A01G337100 chr3A 87.123 365 42 4 32 393 746722694 746722332 2.650000e-110 409.0
25 TraesCS2A01G337100 chr3A 86.828 372 39 8 25 393 594513386 594513022 9.530000e-110 407.0
26 TraesCS2A01G337100 chrUn 86.885 366 42 5 32 393 33699365 33699002 3.430000e-109 405.0
27 TraesCS2A01G337100 chrUn 86.612 366 43 5 32 393 33406525 33406162 1.600000e-107 399.0
28 TraesCS2A01G337100 chrUn 86.649 367 41 7 32 393 33441608 33441245 1.600000e-107 399.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G337100 chr2A 570723213 570726070 2857 False 1934.666667 5278 95.530667 1 2858 3 chr2A.!!$F1 2857
1 TraesCS2A01G337100 chr2B 491353174 491355456 2282 True 887.600000 3280 93.778600 665 2819 5 chr2B.!!$R1 2154
2 TraesCS2A01G337100 chr2D 419050164 419052260 2096 True 787.780000 3278 91.187200 763 2857 5 chr2D.!!$R1 2094
3 TraesCS2A01G337100 chr6A 306046745 306047578 833 True 732.000000 732 82.660000 1006 1839 1 chr6A.!!$R1 833
4 TraesCS2A01G337100 chr6D 237427474 237428307 833 False 721.000000 721 82.423000 1006 1839 1 chr6D.!!$F1 833
5 TraesCS2A01G337100 chr6D 316824836 316825669 833 True 704.000000 704 82.067000 1006 1839 1 chr6D.!!$R1 833
6 TraesCS2A01G337100 chr6B 364901730 364902563 833 False 715.000000 715 82.304000 1006 1839 1 chr6B.!!$F2 833
7 TraesCS2A01G337100 chr6B 507620691 507621517 826 False 686.000000 686 81.709000 1006 1832 1 chr6B.!!$F3 826

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
54 55 0.030235 GGTCACGGTTTTGCTTCCAC 59.97 55.0 0.0 0.0 0.0 4.02 F
345 346 0.110056 GCATCACTTGTCGCAACCTG 60.11 55.0 0.0 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1344 1363 2.046988 TCGTCGTACTCGAGGCCA 60.047 61.111 18.41 0.0 46.96 5.36 R
2131 2157 2.034939 CCTGACTGATGCAAAGCAACAA 59.965 45.455 3.63 0.0 43.62 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.520748 AAAGAGGAAAGAGCCCTATTTGA 57.479 39.130 0.00 0.00 41.90 2.69
23 24 4.495690 AGAGGAAAGAGCCCTATTTGAC 57.504 45.455 0.00 0.00 33.36 3.18
24 25 3.201045 AGAGGAAAGAGCCCTATTTGACC 59.799 47.826 0.00 0.00 33.36 4.02
25 26 2.242452 AGGAAAGAGCCCTATTTGACCC 59.758 50.000 0.00 0.00 30.92 4.46
26 27 2.242452 GGAAAGAGCCCTATTTGACCCT 59.758 50.000 0.00 0.00 0.00 4.34
27 28 3.309193 GGAAAGAGCCCTATTTGACCCTT 60.309 47.826 0.00 0.00 0.00 3.95
28 29 3.653835 AAGAGCCCTATTTGACCCTTC 57.346 47.619 0.00 0.00 0.00 3.46
29 30 1.847088 AGAGCCCTATTTGACCCTTCC 59.153 52.381 0.00 0.00 0.00 3.46
30 31 1.564348 GAGCCCTATTTGACCCTTCCA 59.436 52.381 0.00 0.00 0.00 3.53
31 32 1.285078 AGCCCTATTTGACCCTTCCAC 59.715 52.381 0.00 0.00 0.00 4.02
32 33 2.017113 GCCCTATTTGACCCTTCCACG 61.017 57.143 0.00 0.00 0.00 4.94
33 34 1.557832 CCCTATTTGACCCTTCCACGA 59.442 52.381 0.00 0.00 0.00 4.35
34 35 2.420129 CCCTATTTGACCCTTCCACGAG 60.420 54.545 0.00 0.00 0.00 4.18
35 36 2.420129 CCTATTTGACCCTTCCACGAGG 60.420 54.545 0.00 0.00 36.52 4.63
41 42 2.261671 CCTTCCACGAGGGTCACG 59.738 66.667 0.00 0.00 38.11 4.35
42 43 2.261671 CTTCCACGAGGGTCACGG 59.738 66.667 0.00 0.00 38.11 4.94
43 44 2.522436 TTCCACGAGGGTCACGGT 60.522 61.111 0.00 0.00 38.11 4.83
44 45 2.095978 CTTCCACGAGGGTCACGGTT 62.096 60.000 0.00 0.00 38.11 4.44
45 46 1.688269 TTCCACGAGGGTCACGGTTT 61.688 55.000 0.00 0.00 38.11 3.27
46 47 1.227734 CCACGAGGGTCACGGTTTT 60.228 57.895 0.00 0.00 34.93 2.43
47 48 1.503818 CCACGAGGGTCACGGTTTTG 61.504 60.000 0.00 0.00 34.93 2.44
48 49 1.890510 ACGAGGGTCACGGTTTTGC 60.891 57.895 0.00 0.00 34.93 3.68
49 50 1.597027 CGAGGGTCACGGTTTTGCT 60.597 57.895 0.00 0.00 0.00 3.91
50 51 1.164041 CGAGGGTCACGGTTTTGCTT 61.164 55.000 0.00 0.00 0.00 3.91
51 52 0.591659 GAGGGTCACGGTTTTGCTTC 59.408 55.000 0.00 0.00 0.00 3.86
52 53 0.822121 AGGGTCACGGTTTTGCTTCC 60.822 55.000 0.00 0.00 0.00 3.46
53 54 1.104577 GGGTCACGGTTTTGCTTCCA 61.105 55.000 0.00 0.00 0.00 3.53
54 55 0.030235 GGTCACGGTTTTGCTTCCAC 59.970 55.000 0.00 0.00 0.00 4.02
55 56 0.736053 GTCACGGTTTTGCTTCCACA 59.264 50.000 0.00 0.00 0.00 4.17
56 57 1.133407 GTCACGGTTTTGCTTCCACAA 59.867 47.619 0.00 0.00 0.00 3.33
57 58 1.403679 TCACGGTTTTGCTTCCACAAG 59.596 47.619 0.00 0.00 0.00 3.16
58 59 1.403679 CACGGTTTTGCTTCCACAAGA 59.596 47.619 0.00 0.00 0.00 3.02
59 60 1.676006 ACGGTTTTGCTTCCACAAGAG 59.324 47.619 0.00 0.00 0.00 2.85
60 61 1.001378 CGGTTTTGCTTCCACAAGAGG 60.001 52.381 0.00 0.00 0.00 3.69
64 65 3.257933 GCTTCCACAAGAGGCACG 58.742 61.111 0.00 0.00 46.54 5.34
65 66 2.328099 GCTTCCACAAGAGGCACGG 61.328 63.158 0.00 0.00 46.54 4.94
66 67 1.672356 CTTCCACAAGAGGCACGGG 60.672 63.158 0.00 0.00 0.00 5.28
67 68 2.397413 CTTCCACAAGAGGCACGGGT 62.397 60.000 0.00 0.00 0.00 5.28
68 69 2.669569 CCACAAGAGGCACGGGTG 60.670 66.667 0.00 0.00 0.00 4.61
69 70 2.111043 CACAAGAGGCACGGGTGT 59.889 61.111 0.25 0.00 0.00 4.16
87 88 0.716108 GTGATTTCACGAGAGGCACG 59.284 55.000 0.00 0.00 37.10 5.34
88 89 0.389817 TGATTTCACGAGAGGCACGG 60.390 55.000 0.00 0.00 34.93 4.94
89 90 1.079127 ATTTCACGAGAGGCACGGG 60.079 57.895 0.00 0.00 35.35 5.28
90 91 3.876589 TTTCACGAGAGGCACGGGC 62.877 63.158 0.00 0.00 40.13 6.13
101 102 3.423154 CACGGGCGTGCCTCTTTC 61.423 66.667 11.25 0.00 39.39 2.62
104 105 4.388499 GGGCGTGCCTCTTTCGGA 62.388 66.667 11.25 0.00 36.10 4.55
105 106 2.358247 GGCGTGCCTCTTTCGGAA 60.358 61.111 2.98 0.00 0.00 4.30
106 107 1.964373 GGCGTGCCTCTTTCGGAAA 60.964 57.895 2.98 2.78 0.00 3.13
107 108 1.497722 GCGTGCCTCTTTCGGAAAG 59.502 57.895 21.64 21.64 39.88 2.62
108 109 0.949105 GCGTGCCTCTTTCGGAAAGA 60.949 55.000 26.61 26.61 44.82 2.52
129 130 4.519610 AAAAACCATGCTCCCGCT 57.480 50.000 0.00 0.00 36.97 5.52
130 131 2.745379 AAAAACCATGCTCCCGCTT 58.255 47.368 0.00 0.00 36.97 4.68
131 132 0.318120 AAAAACCATGCTCCCGCTTG 59.682 50.000 0.00 0.00 40.06 4.01
135 136 3.685435 CATGCTCCCGCTTGGTTT 58.315 55.556 0.00 0.00 37.58 3.27
136 137 1.966762 CATGCTCCCGCTTGGTTTT 59.033 52.632 0.00 0.00 37.58 2.43
137 138 0.318120 CATGCTCCCGCTTGGTTTTT 59.682 50.000 0.00 0.00 37.58 1.94
185 186 9.480053 AAAGTTTGTCAAAATCTATCAACATGG 57.520 29.630 0.00 0.00 0.00 3.66
186 187 7.605449 AGTTTGTCAAAATCTATCAACATGGG 58.395 34.615 0.00 0.00 0.00 4.00
187 188 7.451255 AGTTTGTCAAAATCTATCAACATGGGA 59.549 33.333 0.00 0.00 0.00 4.37
188 189 7.959658 TTGTCAAAATCTATCAACATGGGAT 57.040 32.000 0.00 2.37 0.00 3.85
189 190 7.572523 TGTCAAAATCTATCAACATGGGATC 57.427 36.000 5.52 0.00 0.00 3.36
190 191 7.348815 TGTCAAAATCTATCAACATGGGATCT 58.651 34.615 5.52 0.00 0.00 2.75
191 192 8.493607 TGTCAAAATCTATCAACATGGGATCTA 58.506 33.333 5.52 0.00 0.00 1.98
192 193 8.997323 GTCAAAATCTATCAACATGGGATCTAG 58.003 37.037 5.52 0.62 0.00 2.43
193 194 8.717717 TCAAAATCTATCAACATGGGATCTAGT 58.282 33.333 5.52 0.00 0.00 2.57
194 195 9.347240 CAAAATCTATCAACATGGGATCTAGTT 57.653 33.333 5.52 0.16 0.00 2.24
195 196 9.927081 AAAATCTATCAACATGGGATCTAGTTT 57.073 29.630 5.52 5.16 0.00 2.66
196 197 9.927081 AAATCTATCAACATGGGATCTAGTTTT 57.073 29.630 5.52 4.80 0.00 2.43
197 198 8.915057 ATCTATCAACATGGGATCTAGTTTTG 57.085 34.615 5.52 0.00 0.00 2.44
198 199 8.089625 TCTATCAACATGGGATCTAGTTTTGA 57.910 34.615 5.52 0.00 0.00 2.69
199 200 8.548025 TCTATCAACATGGGATCTAGTTTTGAA 58.452 33.333 5.52 0.00 0.00 2.69
200 201 7.636150 ATCAACATGGGATCTAGTTTTGAAG 57.364 36.000 0.00 0.00 0.00 3.02
201 202 6.778821 TCAACATGGGATCTAGTTTTGAAGA 58.221 36.000 0.00 0.00 0.00 2.87
202 203 7.405292 TCAACATGGGATCTAGTTTTGAAGAT 58.595 34.615 0.00 0.00 0.00 2.40
203 204 7.554118 TCAACATGGGATCTAGTTTTGAAGATC 59.446 37.037 0.00 4.15 37.15 2.75
204 205 7.205515 ACATGGGATCTAGTTTTGAAGATCT 57.794 36.000 11.05 0.00 37.77 2.75
205 206 7.278875 ACATGGGATCTAGTTTTGAAGATCTC 58.721 38.462 11.05 8.38 38.41 2.75
206 207 5.907207 TGGGATCTAGTTTTGAAGATCTCG 58.093 41.667 11.05 0.00 40.21 4.04
207 208 5.656859 TGGGATCTAGTTTTGAAGATCTCGA 59.343 40.000 11.05 0.00 40.21 4.04
208 209 6.183360 TGGGATCTAGTTTTGAAGATCTCGAG 60.183 42.308 5.93 5.93 40.21 4.04
209 210 6.212955 GGATCTAGTTTTGAAGATCTCGAGG 58.787 44.000 13.56 0.00 37.77 4.63
210 211 6.183360 GGATCTAGTTTTGAAGATCTCGAGGT 60.183 42.308 13.56 4.76 37.77 3.85
211 212 5.955488 TCTAGTTTTGAAGATCTCGAGGTG 58.045 41.667 13.56 0.00 0.00 4.00
212 213 4.873746 AGTTTTGAAGATCTCGAGGTGA 57.126 40.909 13.56 0.00 0.00 4.02
213 214 4.815269 AGTTTTGAAGATCTCGAGGTGAG 58.185 43.478 13.56 0.00 46.72 3.51
225 226 4.760530 TCGAGGTGAGAAATCCAATGAT 57.239 40.909 0.00 0.00 0.00 2.45
226 227 4.445453 TCGAGGTGAGAAATCCAATGATG 58.555 43.478 0.00 0.00 0.00 3.07
227 228 4.162131 TCGAGGTGAGAAATCCAATGATGA 59.838 41.667 0.00 0.00 0.00 2.92
228 229 4.877823 CGAGGTGAGAAATCCAATGATGAA 59.122 41.667 0.00 0.00 0.00 2.57
229 230 5.355071 CGAGGTGAGAAATCCAATGATGAAA 59.645 40.000 0.00 0.00 0.00 2.69
230 231 6.127925 CGAGGTGAGAAATCCAATGATGAAAA 60.128 38.462 0.00 0.00 0.00 2.29
231 232 7.415989 CGAGGTGAGAAATCCAATGATGAAAAT 60.416 37.037 0.00 0.00 0.00 1.82
232 233 7.553334 AGGTGAGAAATCCAATGATGAAAATG 58.447 34.615 0.00 0.00 0.00 2.32
233 234 6.759827 GGTGAGAAATCCAATGATGAAAATGG 59.240 38.462 0.00 0.00 0.00 3.16
234 235 7.325694 GTGAGAAATCCAATGATGAAAATGGT 58.674 34.615 0.00 0.00 34.50 3.55
235 236 7.820872 GTGAGAAATCCAATGATGAAAATGGTT 59.179 33.333 0.00 0.00 34.50 3.67
236 237 8.036575 TGAGAAATCCAATGATGAAAATGGTTC 58.963 33.333 0.00 0.00 34.50 3.62
237 238 7.909518 AGAAATCCAATGATGAAAATGGTTCA 58.090 30.769 0.00 0.00 34.50 3.18
238 239 8.377034 AGAAATCCAATGATGAAAATGGTTCAA 58.623 29.630 0.00 0.00 34.50 2.69
239 240 8.556213 AAATCCAATGATGAAAATGGTTCAAG 57.444 30.769 0.00 0.00 34.50 3.02
240 241 6.914654 TCCAATGATGAAAATGGTTCAAGA 57.085 33.333 0.00 0.00 34.50 3.02
241 242 7.484993 TCCAATGATGAAAATGGTTCAAGAT 57.515 32.000 0.00 0.00 34.50 2.40
242 243 7.909518 TCCAATGATGAAAATGGTTCAAGATT 58.090 30.769 0.00 0.00 34.50 2.40
243 244 8.377034 TCCAATGATGAAAATGGTTCAAGATTT 58.623 29.630 0.00 0.00 34.50 2.17
244 245 8.447833 CCAATGATGAAAATGGTTCAAGATTTG 58.552 33.333 0.00 0.00 31.55 2.32
245 246 8.447833 CAATGATGAAAATGGTTCAAGATTTGG 58.552 33.333 0.00 0.00 31.55 3.28
246 247 7.300556 TGATGAAAATGGTTCAAGATTTGGA 57.699 32.000 0.00 0.00 31.55 3.53
247 248 7.153985 TGATGAAAATGGTTCAAGATTTGGAC 58.846 34.615 0.00 0.00 38.49 4.02
248 249 5.527951 TGAAAATGGTTCAAGATTTGGACG 58.472 37.500 0.00 0.00 40.19 4.79
249 250 3.575965 AATGGTTCAAGATTTGGACGC 57.424 42.857 0.00 0.00 40.19 5.19
250 251 1.974265 TGGTTCAAGATTTGGACGCA 58.026 45.000 0.00 0.00 40.19 5.24
251 252 1.606668 TGGTTCAAGATTTGGACGCAC 59.393 47.619 0.00 0.00 40.19 5.34
252 253 1.399727 GGTTCAAGATTTGGACGCACG 60.400 52.381 0.00 0.00 40.19 5.34
253 254 0.871722 TTCAAGATTTGGACGCACGG 59.128 50.000 0.00 0.00 0.00 4.94
254 255 0.250124 TCAAGATTTGGACGCACGGT 60.250 50.000 0.00 0.00 0.00 4.83
255 256 0.591170 CAAGATTTGGACGCACGGTT 59.409 50.000 0.00 0.00 0.00 4.44
256 257 1.001815 CAAGATTTGGACGCACGGTTT 60.002 47.619 0.00 0.00 0.00 3.27
257 258 2.172851 AGATTTGGACGCACGGTTTA 57.827 45.000 0.00 0.00 0.00 2.01
258 259 2.496111 AGATTTGGACGCACGGTTTAA 58.504 42.857 0.00 0.00 0.00 1.52
259 260 2.879646 AGATTTGGACGCACGGTTTAAA 59.120 40.909 0.00 0.00 0.00 1.52
260 261 3.315749 AGATTTGGACGCACGGTTTAAAA 59.684 39.130 0.00 0.00 0.00 1.52
261 262 2.759538 TTGGACGCACGGTTTAAAAG 57.240 45.000 0.00 0.00 0.00 2.27
262 263 1.950828 TGGACGCACGGTTTAAAAGA 58.049 45.000 0.00 0.00 0.00 2.52
263 264 2.496111 TGGACGCACGGTTTAAAAGAT 58.504 42.857 0.00 0.00 0.00 2.40
264 265 3.661944 TGGACGCACGGTTTAAAAGATA 58.338 40.909 0.00 0.00 0.00 1.98
265 266 4.063689 TGGACGCACGGTTTAAAAGATAA 58.936 39.130 0.00 0.00 0.00 1.75
266 267 4.514441 TGGACGCACGGTTTAAAAGATAAA 59.486 37.500 0.00 0.00 0.00 1.40
267 268 5.008415 TGGACGCACGGTTTAAAAGATAAAA 59.992 36.000 0.00 0.00 0.00 1.52
268 269 5.340403 GGACGCACGGTTTAAAAGATAAAAC 59.660 40.000 0.00 0.00 35.34 2.43
269 270 5.819059 ACGCACGGTTTAAAAGATAAAACA 58.181 33.333 0.00 0.00 37.33 2.83
270 271 6.440436 ACGCACGGTTTAAAAGATAAAACAT 58.560 32.000 0.00 0.00 37.33 2.71
271 272 6.919115 ACGCACGGTTTAAAAGATAAAACATT 59.081 30.769 0.00 0.00 37.33 2.71
272 273 7.435784 ACGCACGGTTTAAAAGATAAAACATTT 59.564 29.630 0.00 0.00 37.33 2.32
273 274 8.270111 CGCACGGTTTAAAAGATAAAACATTTT 58.730 29.630 0.00 0.00 37.33 1.82
274 275 9.364110 GCACGGTTTAAAAGATAAAACATTTTG 57.636 29.630 0.00 0.00 37.33 2.44
290 291 8.889849 AAACATTTTGAATAAACGGATCTACG 57.110 30.769 0.00 0.00 40.31 3.51
291 292 7.837202 ACATTTTGAATAAACGGATCTACGA 57.163 32.000 0.00 0.00 37.61 3.43
292 293 8.259049 ACATTTTGAATAAACGGATCTACGAA 57.741 30.769 0.00 0.00 37.61 3.85
293 294 8.723311 ACATTTTGAATAAACGGATCTACGAAA 58.277 29.630 0.00 0.00 37.61 3.46
294 295 9.549509 CATTTTGAATAAACGGATCTACGAAAA 57.450 29.630 0.00 0.00 37.61 2.29
316 317 5.761818 AAAAGAAAAACTCACAAGTTGCG 57.238 34.783 1.81 0.00 45.07 4.85
317 318 4.695217 AAGAAAAACTCACAAGTTGCGA 57.305 36.364 1.81 0.00 45.07 5.10
318 319 4.900635 AGAAAAACTCACAAGTTGCGAT 57.099 36.364 1.81 0.00 45.07 4.58
319 320 6.371809 AAGAAAAACTCACAAGTTGCGATA 57.628 33.333 1.81 0.00 45.07 2.92
320 321 6.371809 AGAAAAACTCACAAGTTGCGATAA 57.628 33.333 1.81 0.00 45.07 1.75
321 322 6.430451 AGAAAAACTCACAAGTTGCGATAAG 58.570 36.000 1.81 0.00 45.07 1.73
322 323 5.751243 AAAACTCACAAGTTGCGATAAGT 57.249 34.783 1.81 0.00 45.07 2.24
323 324 4.732285 AACTCACAAGTTGCGATAAGTG 57.268 40.909 1.81 0.00 44.13 3.16
324 325 3.067106 ACTCACAAGTTGCGATAAGTGG 58.933 45.455 1.81 0.00 28.74 4.00
325 326 1.804151 TCACAAGTTGCGATAAGTGGC 59.196 47.619 1.81 0.00 0.00 5.01
326 327 0.796312 ACAAGTTGCGATAAGTGGCG 59.204 50.000 1.81 0.00 0.00 5.69
337 338 3.972227 AGTGGCGCATCACTTGTC 58.028 55.556 10.83 0.00 44.74 3.18
338 339 2.029288 AGTGGCGCATCACTTGTCG 61.029 57.895 10.83 0.00 44.74 4.35
339 340 3.422303 TGGCGCATCACTTGTCGC 61.422 61.111 10.83 0.00 44.59 5.19
340 341 3.422303 GGCGCATCACTTGTCGCA 61.422 61.111 10.83 0.00 46.02 5.10
341 342 2.555782 GCGCATCACTTGTCGCAA 59.444 55.556 0.30 0.00 44.65 4.85
342 343 1.793613 GCGCATCACTTGTCGCAAC 60.794 57.895 0.30 0.00 44.65 4.17
343 344 1.154413 CGCATCACTTGTCGCAACC 60.154 57.895 0.00 0.00 0.00 3.77
344 345 1.568612 CGCATCACTTGTCGCAACCT 61.569 55.000 0.00 0.00 0.00 3.50
345 346 0.110056 GCATCACTTGTCGCAACCTG 60.110 55.000 0.00 0.00 0.00 4.00
346 347 0.518636 CATCACTTGTCGCAACCTGG 59.481 55.000 0.00 0.00 0.00 4.45
347 348 0.396435 ATCACTTGTCGCAACCTGGA 59.604 50.000 0.00 0.00 0.00 3.86
348 349 0.179234 TCACTTGTCGCAACCTGGAA 59.821 50.000 0.00 0.00 0.00 3.53
349 350 1.021202 CACTTGTCGCAACCTGGAAA 58.979 50.000 0.00 0.00 0.00 3.13
350 351 1.403679 CACTTGTCGCAACCTGGAAAA 59.596 47.619 0.00 0.00 0.00 2.29
351 352 2.096248 ACTTGTCGCAACCTGGAAAAA 58.904 42.857 0.00 0.00 0.00 1.94
352 353 2.693074 ACTTGTCGCAACCTGGAAAAAT 59.307 40.909 0.00 0.00 0.00 1.82
353 354 2.791383 TGTCGCAACCTGGAAAAATG 57.209 45.000 0.00 0.00 0.00 2.32
354 355 1.339610 TGTCGCAACCTGGAAAAATGG 59.660 47.619 0.00 0.00 0.00 3.16
355 356 1.611491 GTCGCAACCTGGAAAAATGGA 59.389 47.619 0.00 0.00 0.00 3.41
356 357 1.885887 TCGCAACCTGGAAAAATGGAG 59.114 47.619 0.00 0.00 0.00 3.86
357 358 1.613437 CGCAACCTGGAAAAATGGAGT 59.387 47.619 0.00 0.00 0.00 3.85
358 359 2.607771 CGCAACCTGGAAAAATGGAGTG 60.608 50.000 0.00 0.00 0.00 3.51
359 360 2.365293 GCAACCTGGAAAAATGGAGTGT 59.635 45.455 0.00 0.00 0.00 3.55
360 361 3.181466 GCAACCTGGAAAAATGGAGTGTT 60.181 43.478 0.00 0.00 0.00 3.32
361 362 4.620982 CAACCTGGAAAAATGGAGTGTTC 58.379 43.478 0.00 0.00 0.00 3.18
362 363 4.184649 ACCTGGAAAAATGGAGTGTTCT 57.815 40.909 0.00 0.00 0.00 3.01
363 364 4.546674 ACCTGGAAAAATGGAGTGTTCTT 58.453 39.130 0.00 0.00 0.00 2.52
364 365 4.962362 ACCTGGAAAAATGGAGTGTTCTTT 59.038 37.500 0.00 0.00 0.00 2.52
365 366 5.163416 ACCTGGAAAAATGGAGTGTTCTTTG 60.163 40.000 0.00 0.00 0.00 2.77
366 367 4.692228 TGGAAAAATGGAGTGTTCTTTGC 58.308 39.130 0.00 0.00 0.00 3.68
367 368 4.161189 TGGAAAAATGGAGTGTTCTTTGCA 59.839 37.500 0.00 0.00 0.00 4.08
368 369 5.115480 GGAAAAATGGAGTGTTCTTTGCAA 58.885 37.500 0.00 0.00 0.00 4.08
369 370 5.006649 GGAAAAATGGAGTGTTCTTTGCAAC 59.993 40.000 0.00 0.00 0.00 4.17
370 371 3.354089 AATGGAGTGTTCTTTGCAACG 57.646 42.857 0.00 0.00 0.00 4.10
371 372 2.031258 TGGAGTGTTCTTTGCAACGA 57.969 45.000 0.00 0.00 0.00 3.85
372 373 1.939934 TGGAGTGTTCTTTGCAACGAG 59.060 47.619 0.00 0.00 0.00 4.18
373 374 1.940613 GGAGTGTTCTTTGCAACGAGT 59.059 47.619 0.00 0.00 0.00 4.18
374 375 3.128349 GGAGTGTTCTTTGCAACGAGTA 58.872 45.455 0.00 0.00 0.00 2.59
375 376 3.059800 GGAGTGTTCTTTGCAACGAGTAC 60.060 47.826 0.00 6.11 0.00 2.73
376 377 3.793559 AGTGTTCTTTGCAACGAGTACT 58.206 40.909 14.37 14.37 0.00 2.73
377 378 3.802685 AGTGTTCTTTGCAACGAGTACTC 59.197 43.478 13.18 13.18 0.00 2.59
395 396 8.318876 CGAGTACTCGTTAATTAGTGATTTTGG 58.681 37.037 32.24 2.27 46.99 3.28
396 397 9.148104 GAGTACTCGTTAATTAGTGATTTTGGT 57.852 33.333 7.22 0.00 0.00 3.67
397 398 9.498176 AGTACTCGTTAATTAGTGATTTTGGTT 57.502 29.630 0.00 0.00 0.00 3.67
420 421 4.894798 TTTGTTCACGTTTGTTTTGAGC 57.105 36.364 0.00 0.00 0.00 4.26
421 422 3.560902 TGTTCACGTTTGTTTTGAGCA 57.439 38.095 0.00 0.00 0.00 4.26
422 423 3.497118 TGTTCACGTTTGTTTTGAGCAG 58.503 40.909 0.00 0.00 0.00 4.24
423 424 2.842208 TCACGTTTGTTTTGAGCAGG 57.158 45.000 0.00 0.00 0.00 4.85
424 425 2.088423 TCACGTTTGTTTTGAGCAGGT 58.912 42.857 0.00 0.00 0.00 4.00
425 426 3.271729 TCACGTTTGTTTTGAGCAGGTA 58.728 40.909 0.00 0.00 0.00 3.08
426 427 3.311322 TCACGTTTGTTTTGAGCAGGTAG 59.689 43.478 0.00 0.00 0.00 3.18
427 428 3.311322 CACGTTTGTTTTGAGCAGGTAGA 59.689 43.478 0.00 0.00 0.00 2.59
428 429 3.560068 ACGTTTGTTTTGAGCAGGTAGAG 59.440 43.478 0.00 0.00 0.00 2.43
429 430 3.058914 CGTTTGTTTTGAGCAGGTAGAGG 60.059 47.826 0.00 0.00 0.00 3.69
430 431 2.859165 TGTTTTGAGCAGGTAGAGGG 57.141 50.000 0.00 0.00 0.00 4.30
431 432 1.271379 TGTTTTGAGCAGGTAGAGGGC 60.271 52.381 0.00 0.00 0.00 5.19
432 433 0.328258 TTTTGAGCAGGTAGAGGGCC 59.672 55.000 0.00 0.00 0.00 5.80
433 434 1.899437 TTTGAGCAGGTAGAGGGCCG 61.899 60.000 0.00 0.00 0.00 6.13
434 435 3.541713 GAGCAGGTAGAGGGCCGG 61.542 72.222 0.00 0.00 0.00 6.13
473 474 2.185350 GCGGCAGCTGCTCTCTAA 59.815 61.111 35.82 0.00 41.70 2.10
474 475 1.227497 GCGGCAGCTGCTCTCTAAT 60.227 57.895 35.82 0.00 41.70 1.73
475 476 1.220817 GCGGCAGCTGCTCTCTAATC 61.221 60.000 35.82 16.98 41.70 1.75
476 477 0.938637 CGGCAGCTGCTCTCTAATCG 60.939 60.000 35.82 24.16 41.70 3.34
477 478 0.599728 GGCAGCTGCTCTCTAATCGG 60.600 60.000 35.82 0.00 41.70 4.18
478 479 1.220817 GCAGCTGCTCTCTAATCGGC 61.221 60.000 31.33 0.00 38.21 5.54
479 480 0.938637 CAGCTGCTCTCTAATCGGCG 60.939 60.000 0.00 0.00 37.20 6.46
480 481 2.306581 GCTGCTCTCTAATCGGCGC 61.307 63.158 0.00 0.00 0.00 6.53
481 482 1.361993 CTGCTCTCTAATCGGCGCT 59.638 57.895 7.64 0.00 0.00 5.92
482 483 0.938637 CTGCTCTCTAATCGGCGCTG 60.939 60.000 10.86 10.86 0.00 5.18
483 484 1.066587 GCTCTCTAATCGGCGCTGT 59.933 57.895 17.37 0.00 0.00 4.40
484 485 0.528684 GCTCTCTAATCGGCGCTGTT 60.529 55.000 17.37 12.22 0.00 3.16
485 486 1.269102 GCTCTCTAATCGGCGCTGTTA 60.269 52.381 17.37 12.69 0.00 2.41
486 487 2.656085 CTCTCTAATCGGCGCTGTTAG 58.344 52.381 22.23 22.23 0.00 2.34
487 488 1.337071 TCTCTAATCGGCGCTGTTAGG 59.663 52.381 25.12 19.24 0.00 2.69
488 489 0.387929 TCTAATCGGCGCTGTTAGGG 59.612 55.000 25.12 12.67 0.00 3.53
494 495 2.513897 GCGCTGTTAGGGCCGAAT 60.514 61.111 1.39 0.00 46.98 3.34
495 496 1.227438 GCGCTGTTAGGGCCGAATA 60.227 57.895 1.39 0.00 46.98 1.75
496 497 1.222115 GCGCTGTTAGGGCCGAATAG 61.222 60.000 16.87 16.87 46.98 1.73
497 498 0.600255 CGCTGTTAGGGCCGAATAGG 60.600 60.000 21.18 10.14 44.97 2.57
498 499 0.756903 GCTGTTAGGGCCGAATAGGA 59.243 55.000 21.18 0.00 45.00 2.94
499 500 1.270358 GCTGTTAGGGCCGAATAGGAG 60.270 57.143 21.18 8.66 45.00 3.69
500 501 0.756903 TGTTAGGGCCGAATAGGAGC 59.243 55.000 1.39 0.00 45.00 4.70
501 502 1.049402 GTTAGGGCCGAATAGGAGCT 58.951 55.000 1.39 0.00 45.00 4.09
502 503 1.001068 GTTAGGGCCGAATAGGAGCTC 59.999 57.143 4.71 4.71 45.00 4.09
503 504 0.542232 TAGGGCCGAATAGGAGCTCC 60.542 60.000 26.22 26.22 45.00 4.70
504 505 2.744377 GGCCGAATAGGAGCTCCC 59.256 66.667 29.54 12.87 45.00 4.30
506 507 1.411651 GGCCGAATAGGAGCTCCCTT 61.412 60.000 29.54 22.17 44.85 3.95
507 508 0.470341 GCCGAATAGGAGCTCCCTTT 59.530 55.000 29.54 21.96 44.85 3.11
508 509 1.134068 GCCGAATAGGAGCTCCCTTTT 60.134 52.381 29.54 19.39 44.85 2.27
509 510 2.684038 GCCGAATAGGAGCTCCCTTTTT 60.684 50.000 29.54 16.86 44.85 1.94
564 565 1.986698 TTTTGAGCGTACGTAGGAGC 58.013 50.000 18.91 13.49 0.00 4.70
565 566 1.171308 TTTGAGCGTACGTAGGAGCT 58.829 50.000 18.91 17.75 43.33 4.09
567 568 3.824810 AGCGTACGTAGGAGCTCC 58.175 61.111 26.22 26.22 34.48 4.70
568 569 1.823041 AGCGTACGTAGGAGCTCCC 60.823 63.158 29.54 14.03 34.48 4.30
570 571 1.382692 GCGTACGTAGGAGCTCCCTT 61.383 60.000 29.54 14.62 44.85 3.95
571 572 1.101331 CGTACGTAGGAGCTCCCTTT 58.899 55.000 29.54 13.83 44.85 3.11
572 573 1.475682 CGTACGTAGGAGCTCCCTTTT 59.524 52.381 29.54 13.43 44.85 2.27
573 574 2.094338 CGTACGTAGGAGCTCCCTTTTT 60.094 50.000 29.54 13.02 44.85 1.94
593 594 6.607004 TTTTTGTTTACCCCTCAGAACAAA 57.393 33.333 8.62 8.62 45.12 2.83
595 596 6.800072 TTTGTTTACCCCTCAGAACAAAAT 57.200 33.333 9.89 0.00 44.35 1.82
596 597 6.399639 TTGTTTACCCCTCAGAACAAAATC 57.600 37.500 0.00 0.00 38.58 2.17
597 598 5.450453 TGTTTACCCCTCAGAACAAAATCA 58.550 37.500 0.00 0.00 0.00 2.57
598 599 5.894393 TGTTTACCCCTCAGAACAAAATCAA 59.106 36.000 0.00 0.00 0.00 2.57
599 600 6.553100 TGTTTACCCCTCAGAACAAAATCAAT 59.447 34.615 0.00 0.00 0.00 2.57
600 601 6.834168 TTACCCCTCAGAACAAAATCAATC 57.166 37.500 0.00 0.00 0.00 2.67
601 602 4.089361 ACCCCTCAGAACAAAATCAATCC 58.911 43.478 0.00 0.00 0.00 3.01
602 603 3.129287 CCCCTCAGAACAAAATCAATCCG 59.871 47.826 0.00 0.00 0.00 4.18
603 604 3.428045 CCCTCAGAACAAAATCAATCCGC 60.428 47.826 0.00 0.00 0.00 5.54
604 605 3.441572 CCTCAGAACAAAATCAATCCGCT 59.558 43.478 0.00 0.00 0.00 5.52
605 606 4.082571 CCTCAGAACAAAATCAATCCGCTT 60.083 41.667 0.00 0.00 0.00 4.68
606 607 5.452078 TCAGAACAAAATCAATCCGCTTT 57.548 34.783 0.00 0.00 0.00 3.51
607 608 5.841810 TCAGAACAAAATCAATCCGCTTTT 58.158 33.333 0.00 0.00 0.00 2.27
608 609 6.279882 TCAGAACAAAATCAATCCGCTTTTT 58.720 32.000 0.00 0.00 0.00 1.94
629 630 4.813296 TTTCTTCGTCCTTTTCTTCTGC 57.187 40.909 0.00 0.00 0.00 4.26
630 631 3.753294 TCTTCGTCCTTTTCTTCTGCT 57.247 42.857 0.00 0.00 0.00 4.24
631 632 3.393800 TCTTCGTCCTTTTCTTCTGCTG 58.606 45.455 0.00 0.00 0.00 4.41
632 633 1.512926 TCGTCCTTTTCTTCTGCTGC 58.487 50.000 0.00 0.00 0.00 5.25
633 634 1.202639 TCGTCCTTTTCTTCTGCTGCA 60.203 47.619 0.88 0.88 0.00 4.41
634 635 1.808945 CGTCCTTTTCTTCTGCTGCAT 59.191 47.619 1.31 0.00 0.00 3.96
635 636 2.159599 CGTCCTTTTCTTCTGCTGCATC 60.160 50.000 1.31 0.00 0.00 3.91
636 637 2.163211 GTCCTTTTCTTCTGCTGCATCC 59.837 50.000 1.31 0.00 0.00 3.51
637 638 2.040813 TCCTTTTCTTCTGCTGCATCCT 59.959 45.455 1.31 0.00 0.00 3.24
638 639 2.824341 CCTTTTCTTCTGCTGCATCCTT 59.176 45.455 1.31 0.00 0.00 3.36
639 640 3.119566 CCTTTTCTTCTGCTGCATCCTTC 60.120 47.826 1.31 0.00 0.00 3.46
640 641 3.430042 TTTCTTCTGCTGCATCCTTCT 57.570 42.857 1.31 0.00 0.00 2.85
641 642 2.687700 TCTTCTGCTGCATCCTTCTC 57.312 50.000 1.31 0.00 0.00 2.87
642 643 2.186243 TCTTCTGCTGCATCCTTCTCT 58.814 47.619 1.31 0.00 0.00 3.10
643 644 2.570752 TCTTCTGCTGCATCCTTCTCTT 59.429 45.455 1.31 0.00 0.00 2.85
644 645 3.008813 TCTTCTGCTGCATCCTTCTCTTT 59.991 43.478 1.31 0.00 0.00 2.52
645 646 3.430042 TCTGCTGCATCCTTCTCTTTT 57.570 42.857 1.31 0.00 0.00 2.27
646 647 3.759581 TCTGCTGCATCCTTCTCTTTTT 58.240 40.909 1.31 0.00 0.00 1.94
678 679 4.837972 AGTAACTTCTGCATCCTTCTTCC 58.162 43.478 0.00 0.00 0.00 3.46
689 690 4.396478 GCATCCTTCTTCCTTTCCAAGTAC 59.604 45.833 0.00 0.00 0.00 2.73
690 691 5.804771 GCATCCTTCTTCCTTTCCAAGTACT 60.805 44.000 0.00 0.00 0.00 2.73
691 692 6.576442 GCATCCTTCTTCCTTTCCAAGTACTA 60.576 42.308 0.00 0.00 0.00 1.82
710 711 1.098712 AAAGTTTCTTGCCGCACCGA 61.099 50.000 0.00 0.00 0.00 4.69
736 737 3.621419 CCCAAATGGCCCATTCTCT 57.379 52.632 9.93 0.00 32.43 3.10
737 738 1.406903 CCCAAATGGCCCATTCTCTC 58.593 55.000 9.93 0.00 32.43 3.20
738 739 1.063417 CCCAAATGGCCCATTCTCTCT 60.063 52.381 9.93 0.00 32.43 3.10
739 740 2.175499 CCCAAATGGCCCATTCTCTCTA 59.825 50.000 9.93 0.00 32.43 2.43
740 741 3.484407 CCAAATGGCCCATTCTCTCTAG 58.516 50.000 9.93 0.00 32.43 2.43
741 742 3.484407 CAAATGGCCCATTCTCTCTAGG 58.516 50.000 9.93 0.00 32.43 3.02
742 743 1.063183 ATGGCCCATTCTCTCTAGGC 58.937 55.000 0.00 0.00 43.09 3.93
744 745 2.532854 GCCCATTCTCTCTAGGCCA 58.467 57.895 5.01 0.00 37.66 5.36
745 746 1.063183 GCCCATTCTCTCTAGGCCAT 58.937 55.000 5.01 0.00 37.66 4.40
746 747 1.423161 GCCCATTCTCTCTAGGCCATT 59.577 52.381 5.01 0.00 37.66 3.16
749 750 2.289320 CCATTCTCTCTAGGCCATTCGG 60.289 54.545 5.01 0.00 0.00 4.30
752 753 1.497716 TCTCTCTAGGCCATTCGGGTA 59.502 52.381 5.01 0.00 39.65 3.69
753 754 1.614413 CTCTCTAGGCCATTCGGGTAC 59.386 57.143 5.01 0.00 39.65 3.34
754 755 1.063492 TCTCTAGGCCATTCGGGTACA 60.063 52.381 5.01 0.00 39.65 2.90
755 756 1.760613 CTCTAGGCCATTCGGGTACAA 59.239 52.381 5.01 0.00 39.65 2.41
756 757 2.169769 CTCTAGGCCATTCGGGTACAAA 59.830 50.000 5.01 0.00 39.65 2.83
757 758 2.169769 TCTAGGCCATTCGGGTACAAAG 59.830 50.000 5.01 0.00 39.65 2.77
759 760 0.963355 GGCCATTCGGGTACAAAGCA 60.963 55.000 0.00 0.00 39.65 3.91
760 761 0.170339 GCCATTCGGGTACAAAGCAC 59.830 55.000 0.00 0.00 39.65 4.40
761 762 0.446222 CCATTCGGGTACAAAGCACG 59.554 55.000 0.00 0.00 0.00 5.34
816 833 2.044946 GGGCCACCACCTGTCATC 60.045 66.667 4.39 0.00 36.50 2.92
837 854 2.356780 CCCAGACCCCACCGTCTAC 61.357 68.421 0.00 0.00 41.23 2.59
881 898 0.529555 CCAAACAAAACCCACAGGCG 60.530 55.000 0.00 0.00 36.11 5.52
937 954 4.069232 CAAGCCCGCACCGAGAGA 62.069 66.667 0.00 0.00 0.00 3.10
1344 1363 0.995024 CCACCATCTTCACCTCCCTT 59.005 55.000 0.00 0.00 0.00 3.95
1407 1426 2.665185 GTGCTCAAGGCCGTCGTT 60.665 61.111 0.00 0.00 40.92 3.85
1491 1510 1.000896 CCTCATCAAAAGGGCCCGT 60.001 57.895 18.44 11.44 0.00 5.28
1581 1600 1.807573 CGAGAAGAAGCAGGTCGCC 60.808 63.158 0.00 0.00 44.04 5.54
1609 1628 1.375268 GCTGAGCGCTCCAAGTTCT 60.375 57.895 33.23 0.00 35.14 3.01
1680 1699 0.787183 GAGAAAGTGAGTCTGCACGC 59.213 55.000 0.00 0.00 43.42 5.34
1895 1915 6.909550 TTTACTTGCCCAAACATATCTTGT 57.090 33.333 0.00 0.00 41.53 3.16
1950 1970 5.994250 ACAATGATATCTGTTGCTGTAGGT 58.006 37.500 16.40 0.00 0.00 3.08
1951 1971 6.051717 ACAATGATATCTGTTGCTGTAGGTC 58.948 40.000 16.40 0.00 0.00 3.85
1952 1972 6.126940 ACAATGATATCTGTTGCTGTAGGTCT 60.127 38.462 16.40 0.00 0.00 3.85
1965 1988 8.780249 GTTGCTGTAGGTCTTTAAGTTTGAATA 58.220 33.333 0.00 0.00 0.00 1.75
2037 2063 7.446319 TGGATATCTTGCTTATGATTTGTCAGG 59.554 37.037 2.05 0.00 0.00 3.86
2078 2104 4.014847 TGAATTTGCATGCTAGTTACGC 57.985 40.909 20.33 3.67 0.00 4.42
2129 2155 0.940833 TCATTGTTTCGAACGCTGCA 59.059 45.000 0.00 0.00 0.00 4.41
2131 2157 0.944386 ATTGTTTCGAACGCTGCAGT 59.056 45.000 16.64 0.00 0.00 4.40
2150 2176 2.689471 AGTTGTTGCTTTGCATCAGTCA 59.311 40.909 0.00 0.00 39.04 3.41
2151 2178 3.047796 GTTGTTGCTTTGCATCAGTCAG 58.952 45.455 0.00 0.00 39.04 3.51
2203 2230 2.519771 TCTTGCCTTTCATGGATGCT 57.480 45.000 0.00 0.00 0.00 3.79
2220 2247 9.294030 CATGGATGCTATCTTTGTTTTAGAAAC 57.706 33.333 0.00 0.00 0.00 2.78
2227 2254 8.512138 GCTATCTTTGTTTTAGAAACTTAGGCA 58.488 33.333 5.30 0.00 0.00 4.75
2300 2327 0.961753 GGTTGCATATTAGGCCTGCC 59.038 55.000 17.99 0.00 35.02 4.85
2321 2348 4.820897 CCTGTTCTGCAACTGATGTACTA 58.179 43.478 0.00 0.00 34.21 1.82
2385 2412 6.535508 GGTTGGCTTCTATACTGTTACAAGAG 59.464 42.308 0.00 0.00 0.00 2.85
2461 2488 2.014335 TCAGATCAACGGTGCTCATG 57.986 50.000 7.11 2.65 0.00 3.07
2537 2564 7.112779 ACTTGCCTTTGCTTCTATAGTGTTAT 58.887 34.615 0.00 0.00 38.71 1.89
2570 2597 7.658525 ATTCTAGATATGATAGGCCAGTGAG 57.341 40.000 5.01 0.00 0.00 3.51
2646 2673 6.371825 ACTTGCCTTTGCTTCTATACTGTTAC 59.628 38.462 0.00 0.00 38.71 2.50
2679 2706 9.662947 CAATTCTAGATAATGATATGCCAGTGA 57.337 33.333 0.00 0.00 0.00 3.41
2731 2868 6.122277 TCTTGGGAGTAATGCATCCTTTTAG 58.878 40.000 0.00 0.00 35.80 1.85
2741 2878 3.256558 GCATCCTTTTAGCTTGCCTTTG 58.743 45.455 0.00 0.00 0.00 2.77
2766 2903 5.139435 TCTATAGTGTGATATGCCAGTGC 57.861 43.478 0.00 0.00 38.26 4.40
2807 2944 7.806690 TGTGATGTTTTTAGCTCAACAGTATC 58.193 34.615 10.73 5.73 36.36 2.24
2857 3006 2.614779 TCTTCTTTGCGAGCTCATGAG 58.385 47.619 18.84 18.84 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.257262 GTCAAATAGGGCTCTTTCCTCTTT 58.743 41.667 0.00 0.00 35.92 2.52
1 2 4.324641 GGTCAAATAGGGCTCTTTCCTCTT 60.325 45.833 0.00 0.00 35.92 2.85
2 3 3.201045 GGTCAAATAGGGCTCTTTCCTCT 59.799 47.826 0.00 0.00 35.92 3.69
3 4 3.546724 GGTCAAATAGGGCTCTTTCCTC 58.453 50.000 0.00 0.00 35.92 3.71
4 5 2.242452 GGGTCAAATAGGGCTCTTTCCT 59.758 50.000 0.00 0.00 38.36 3.36
5 6 2.242452 AGGGTCAAATAGGGCTCTTTCC 59.758 50.000 0.00 0.00 0.00 3.13
6 7 3.653835 AGGGTCAAATAGGGCTCTTTC 57.346 47.619 0.00 0.00 0.00 2.62
7 8 3.309193 GGAAGGGTCAAATAGGGCTCTTT 60.309 47.826 0.00 0.00 0.00 2.52
8 9 2.242452 GGAAGGGTCAAATAGGGCTCTT 59.758 50.000 0.00 0.00 0.00 2.85
9 10 1.847088 GGAAGGGTCAAATAGGGCTCT 59.153 52.381 0.00 0.00 0.00 4.09
10 11 1.564348 TGGAAGGGTCAAATAGGGCTC 59.436 52.381 0.00 0.00 0.00 4.70
11 12 1.285078 GTGGAAGGGTCAAATAGGGCT 59.715 52.381 0.00 0.00 0.00 5.19
12 13 1.763968 GTGGAAGGGTCAAATAGGGC 58.236 55.000 0.00 0.00 0.00 5.19
13 14 1.557832 TCGTGGAAGGGTCAAATAGGG 59.442 52.381 0.00 0.00 0.00 3.53
14 15 2.420129 CCTCGTGGAAGGGTCAAATAGG 60.420 54.545 0.00 0.00 34.57 2.57
15 16 2.906354 CCTCGTGGAAGGGTCAAATAG 58.094 52.381 0.00 0.00 34.57 1.73
17 18 3.957288 CCTCGTGGAAGGGTCAAAT 57.043 52.632 0.00 0.00 34.57 2.32
24 25 2.261671 CGTGACCCTCGTGGAAGG 59.738 66.667 4.76 0.00 38.00 3.46
25 26 2.095978 AACCGTGACCCTCGTGGAAG 62.096 60.000 4.76 0.00 38.00 3.46
26 27 1.688269 AAACCGTGACCCTCGTGGAA 61.688 55.000 4.76 0.00 38.00 3.53
27 28 1.688269 AAAACCGTGACCCTCGTGGA 61.688 55.000 4.76 0.00 38.00 4.02
28 29 1.227734 AAAACCGTGACCCTCGTGG 60.228 57.895 0.00 0.00 41.37 4.94
29 30 1.938861 CAAAACCGTGACCCTCGTG 59.061 57.895 0.00 0.00 0.00 4.35
30 31 1.890510 GCAAAACCGTGACCCTCGT 60.891 57.895 0.00 0.00 0.00 4.18
31 32 1.164041 AAGCAAAACCGTGACCCTCG 61.164 55.000 0.00 0.00 0.00 4.63
32 33 0.591659 GAAGCAAAACCGTGACCCTC 59.408 55.000 0.00 0.00 0.00 4.30
33 34 0.822121 GGAAGCAAAACCGTGACCCT 60.822 55.000 0.00 0.00 0.00 4.34
34 35 1.104577 TGGAAGCAAAACCGTGACCC 61.105 55.000 0.00 0.00 0.00 4.46
35 36 0.030235 GTGGAAGCAAAACCGTGACC 59.970 55.000 0.00 0.00 0.00 4.02
36 37 0.736053 TGTGGAAGCAAAACCGTGAC 59.264 50.000 0.00 0.00 0.00 3.67
37 38 1.403679 CTTGTGGAAGCAAAACCGTGA 59.596 47.619 0.00 0.00 0.00 4.35
38 39 1.403679 TCTTGTGGAAGCAAAACCGTG 59.596 47.619 0.00 0.00 0.00 4.94
39 40 1.676006 CTCTTGTGGAAGCAAAACCGT 59.324 47.619 0.00 0.00 0.00 4.83
40 41 1.001378 CCTCTTGTGGAAGCAAAACCG 60.001 52.381 0.00 0.00 0.00 4.44
41 42 1.269778 GCCTCTTGTGGAAGCAAAACC 60.270 52.381 0.00 0.00 32.03 3.27
42 43 1.408702 TGCCTCTTGTGGAAGCAAAAC 59.591 47.619 0.00 0.00 38.32 2.43
43 44 1.408702 GTGCCTCTTGTGGAAGCAAAA 59.591 47.619 0.00 0.00 42.24 2.44
44 45 1.032014 GTGCCTCTTGTGGAAGCAAA 58.968 50.000 0.00 0.00 42.24 3.68
45 46 1.165907 CGTGCCTCTTGTGGAAGCAA 61.166 55.000 0.00 0.00 42.24 3.91
46 47 1.597854 CGTGCCTCTTGTGGAAGCA 60.598 57.895 0.00 0.00 38.87 3.91
47 48 2.328099 CCGTGCCTCTTGTGGAAGC 61.328 63.158 0.00 0.00 32.35 3.86
48 49 1.672356 CCCGTGCCTCTTGTGGAAG 60.672 63.158 0.00 0.00 0.00 3.46
49 50 2.429930 CCCGTGCCTCTTGTGGAA 59.570 61.111 0.00 0.00 0.00 3.53
50 51 2.847234 ACCCGTGCCTCTTGTGGA 60.847 61.111 0.00 0.00 0.00 4.02
51 52 2.669569 CACCCGTGCCTCTTGTGG 60.670 66.667 0.00 0.00 0.00 4.17
52 53 2.111043 ACACCCGTGCCTCTTGTG 59.889 61.111 0.00 0.00 0.00 3.33
53 54 1.768684 ATCACACCCGTGCCTCTTGT 61.769 55.000 0.00 0.00 43.28 3.16
54 55 0.606401 AATCACACCCGTGCCTCTTG 60.606 55.000 0.00 0.00 43.28 3.02
55 56 0.110486 AAATCACACCCGTGCCTCTT 59.890 50.000 0.00 0.00 43.28 2.85
56 57 0.321653 GAAATCACACCCGTGCCTCT 60.322 55.000 0.00 0.00 43.28 3.69
57 58 0.605319 TGAAATCACACCCGTGCCTC 60.605 55.000 0.00 0.00 43.28 4.70
58 59 0.889186 GTGAAATCACACCCGTGCCT 60.889 55.000 8.63 0.00 45.75 4.75
59 60 1.579429 GTGAAATCACACCCGTGCC 59.421 57.895 8.63 0.00 45.75 5.01
60 61 1.206578 CGTGAAATCACACCCGTGC 59.793 57.895 13.51 0.00 46.75 5.34
61 62 0.790207 CTCGTGAAATCACACCCGTG 59.210 55.000 13.51 0.00 46.75 4.94
62 63 0.677288 TCTCGTGAAATCACACCCGT 59.323 50.000 13.51 0.00 46.75 5.28
63 64 1.350193 CTCTCGTGAAATCACACCCG 58.650 55.000 13.51 0.15 46.75 5.28
64 65 1.726853 CCTCTCGTGAAATCACACCC 58.273 55.000 13.51 0.00 46.75 4.61
65 66 1.079503 GCCTCTCGTGAAATCACACC 58.920 55.000 13.51 0.00 46.75 4.16
66 67 1.461127 GTGCCTCTCGTGAAATCACAC 59.539 52.381 13.51 0.00 46.75 3.82
67 68 1.795768 GTGCCTCTCGTGAAATCACA 58.204 50.000 13.51 0.97 46.75 3.58
68 69 0.716108 CGTGCCTCTCGTGAAATCAC 59.284 55.000 3.43 3.43 43.15 3.06
69 70 0.389817 CCGTGCCTCTCGTGAAATCA 60.390 55.000 0.00 0.00 0.00 2.57
70 71 1.084370 CCCGTGCCTCTCGTGAAATC 61.084 60.000 0.00 0.00 0.00 2.17
71 72 1.079127 CCCGTGCCTCTCGTGAAAT 60.079 57.895 0.00 0.00 0.00 2.17
72 73 2.342279 CCCGTGCCTCTCGTGAAA 59.658 61.111 0.00 0.00 0.00 2.69
73 74 4.373116 GCCCGTGCCTCTCGTGAA 62.373 66.667 0.00 0.00 0.00 3.18
87 88 3.894547 TTCCGAAAGAGGCACGCCC 62.895 63.158 3.95 0.00 36.58 6.13
88 89 1.912371 CTTTCCGAAAGAGGCACGCC 61.912 60.000 14.72 0.00 41.02 5.68
89 90 0.949105 TCTTTCCGAAAGAGGCACGC 60.949 55.000 17.88 0.00 42.31 5.34
90 91 3.210857 TCTTTCCGAAAGAGGCACG 57.789 52.632 17.88 0.00 42.31 5.34
159 160 9.480053 CCATGTTGATAGATTTTGACAAACTTT 57.520 29.630 0.00 0.00 0.00 2.66
160 161 8.090214 CCCATGTTGATAGATTTTGACAAACTT 58.910 33.333 0.00 0.00 0.00 2.66
161 162 7.451255 TCCCATGTTGATAGATTTTGACAAACT 59.549 33.333 0.00 0.00 0.00 2.66
162 163 7.601856 TCCCATGTTGATAGATTTTGACAAAC 58.398 34.615 0.00 0.00 0.00 2.93
163 164 7.773489 TCCCATGTTGATAGATTTTGACAAA 57.227 32.000 0.00 0.00 0.00 2.83
164 165 7.835682 AGATCCCATGTTGATAGATTTTGACAA 59.164 33.333 0.00 0.00 0.00 3.18
165 166 7.348815 AGATCCCATGTTGATAGATTTTGACA 58.651 34.615 0.00 0.00 0.00 3.58
166 167 7.814264 AGATCCCATGTTGATAGATTTTGAC 57.186 36.000 0.00 0.00 0.00 3.18
167 168 8.717717 ACTAGATCCCATGTTGATAGATTTTGA 58.282 33.333 0.00 0.00 0.00 2.69
168 169 8.915057 ACTAGATCCCATGTTGATAGATTTTG 57.085 34.615 0.00 0.00 0.00 2.44
169 170 9.927081 AAACTAGATCCCATGTTGATAGATTTT 57.073 29.630 0.00 0.00 0.00 1.82
170 171 9.927081 AAAACTAGATCCCATGTTGATAGATTT 57.073 29.630 0.00 0.00 0.00 2.17
171 172 9.347240 CAAAACTAGATCCCATGTTGATAGATT 57.653 33.333 0.00 0.00 0.00 2.40
172 173 8.717717 TCAAAACTAGATCCCATGTTGATAGAT 58.282 33.333 0.00 0.00 0.00 1.98
173 174 8.089625 TCAAAACTAGATCCCATGTTGATAGA 57.910 34.615 0.00 0.00 0.00 1.98
174 175 8.737168 TTCAAAACTAGATCCCATGTTGATAG 57.263 34.615 0.00 0.00 0.00 2.08
175 176 8.548025 TCTTCAAAACTAGATCCCATGTTGATA 58.452 33.333 0.00 0.00 0.00 2.15
176 177 7.405292 TCTTCAAAACTAGATCCCATGTTGAT 58.595 34.615 0.00 0.00 0.00 2.57
177 178 6.778821 TCTTCAAAACTAGATCCCATGTTGA 58.221 36.000 0.00 0.00 0.00 3.18
178 179 7.555554 AGATCTTCAAAACTAGATCCCATGTTG 59.444 37.037 0.00 0.00 38.24 3.33
179 180 7.637511 AGATCTTCAAAACTAGATCCCATGTT 58.362 34.615 0.00 0.00 38.24 2.71
180 181 7.205515 AGATCTTCAAAACTAGATCCCATGT 57.794 36.000 0.00 0.00 38.24 3.21
181 182 6.423302 CGAGATCTTCAAAACTAGATCCCATG 59.577 42.308 0.00 0.00 38.24 3.66
182 183 6.325028 TCGAGATCTTCAAAACTAGATCCCAT 59.675 38.462 0.00 0.00 38.24 4.00
183 184 5.656859 TCGAGATCTTCAAAACTAGATCCCA 59.343 40.000 0.00 0.00 38.24 4.37
184 185 6.150396 TCGAGATCTTCAAAACTAGATCCC 57.850 41.667 0.00 0.00 38.24 3.85
185 186 6.183360 ACCTCGAGATCTTCAAAACTAGATCC 60.183 42.308 15.71 1.33 38.24 3.36
186 187 6.695278 CACCTCGAGATCTTCAAAACTAGATC 59.305 42.308 15.71 0.00 37.89 2.75
187 188 6.378564 TCACCTCGAGATCTTCAAAACTAGAT 59.621 38.462 15.71 0.00 0.00 1.98
188 189 5.710567 TCACCTCGAGATCTTCAAAACTAGA 59.289 40.000 15.71 0.00 0.00 2.43
189 190 5.955488 TCACCTCGAGATCTTCAAAACTAG 58.045 41.667 15.71 0.00 0.00 2.57
190 191 5.710567 TCTCACCTCGAGATCTTCAAAACTA 59.289 40.000 15.71 0.00 46.18 2.24
191 192 4.524714 TCTCACCTCGAGATCTTCAAAACT 59.475 41.667 15.71 0.00 46.18 2.66
192 193 4.810790 TCTCACCTCGAGATCTTCAAAAC 58.189 43.478 15.71 0.00 46.18 2.43
203 204 4.128925 TCATTGGATTTCTCACCTCGAG 57.871 45.455 5.13 5.13 43.80 4.04
204 205 4.162131 TCATCATTGGATTTCTCACCTCGA 59.838 41.667 0.00 0.00 0.00 4.04
205 206 4.445453 TCATCATTGGATTTCTCACCTCG 58.555 43.478 0.00 0.00 0.00 4.63
206 207 6.764308 TTTCATCATTGGATTTCTCACCTC 57.236 37.500 0.00 0.00 0.00 3.85
207 208 7.364408 CCATTTTCATCATTGGATTTCTCACCT 60.364 37.037 0.00 0.00 0.00 4.00
208 209 6.759827 CCATTTTCATCATTGGATTTCTCACC 59.240 38.462 0.00 0.00 0.00 4.02
209 210 7.325694 ACCATTTTCATCATTGGATTTCTCAC 58.674 34.615 0.00 0.00 33.36 3.51
210 211 7.484993 ACCATTTTCATCATTGGATTTCTCA 57.515 32.000 0.00 0.00 33.36 3.27
211 212 8.036575 TGAACCATTTTCATCATTGGATTTCTC 58.963 33.333 0.00 0.00 33.36 2.87
212 213 7.909518 TGAACCATTTTCATCATTGGATTTCT 58.090 30.769 0.00 0.00 33.36 2.52
213 214 8.550710 TTGAACCATTTTCATCATTGGATTTC 57.449 30.769 0.00 0.00 33.36 2.17
214 215 8.377034 TCTTGAACCATTTTCATCATTGGATTT 58.623 29.630 0.00 0.00 33.36 2.17
215 216 7.909518 TCTTGAACCATTTTCATCATTGGATT 58.090 30.769 0.00 0.00 33.36 3.01
216 217 7.484993 TCTTGAACCATTTTCATCATTGGAT 57.515 32.000 0.00 0.00 33.36 3.41
217 218 6.914654 TCTTGAACCATTTTCATCATTGGA 57.085 33.333 0.00 0.00 33.36 3.53
218 219 8.447833 CAAATCTTGAACCATTTTCATCATTGG 58.552 33.333 0.00 0.00 35.31 3.16
219 220 8.447833 CCAAATCTTGAACCATTTTCATCATTG 58.552 33.333 0.00 0.00 0.00 2.82
220 221 8.377034 TCCAAATCTTGAACCATTTTCATCATT 58.623 29.630 0.00 0.00 0.00 2.57
221 222 7.820872 GTCCAAATCTTGAACCATTTTCATCAT 59.179 33.333 0.00 0.00 0.00 2.45
222 223 7.153985 GTCCAAATCTTGAACCATTTTCATCA 58.846 34.615 0.00 0.00 0.00 3.07
223 224 6.308766 CGTCCAAATCTTGAACCATTTTCATC 59.691 38.462 0.00 0.00 0.00 2.92
224 225 6.158598 CGTCCAAATCTTGAACCATTTTCAT 58.841 36.000 0.00 0.00 0.00 2.57
225 226 5.527951 CGTCCAAATCTTGAACCATTTTCA 58.472 37.500 0.00 0.00 0.00 2.69
226 227 4.385748 GCGTCCAAATCTTGAACCATTTTC 59.614 41.667 0.00 0.00 0.00 2.29
227 228 4.202202 TGCGTCCAAATCTTGAACCATTTT 60.202 37.500 0.00 0.00 0.00 1.82
228 229 3.320541 TGCGTCCAAATCTTGAACCATTT 59.679 39.130 0.00 0.00 0.00 2.32
229 230 2.890311 TGCGTCCAAATCTTGAACCATT 59.110 40.909 0.00 0.00 0.00 3.16
230 231 2.228822 GTGCGTCCAAATCTTGAACCAT 59.771 45.455 0.00 0.00 0.00 3.55
231 232 1.606668 GTGCGTCCAAATCTTGAACCA 59.393 47.619 0.00 0.00 0.00 3.67
232 233 1.399727 CGTGCGTCCAAATCTTGAACC 60.400 52.381 0.00 0.00 0.00 3.62
233 234 1.399727 CCGTGCGTCCAAATCTTGAAC 60.400 52.381 0.00 0.00 0.00 3.18
234 235 0.871722 CCGTGCGTCCAAATCTTGAA 59.128 50.000 0.00 0.00 0.00 2.69
235 236 0.250124 ACCGTGCGTCCAAATCTTGA 60.250 50.000 0.00 0.00 0.00 3.02
236 237 0.591170 AACCGTGCGTCCAAATCTTG 59.409 50.000 0.00 0.00 0.00 3.02
237 238 1.314730 AAACCGTGCGTCCAAATCTT 58.685 45.000 0.00 0.00 0.00 2.40
238 239 2.172851 TAAACCGTGCGTCCAAATCT 57.827 45.000 0.00 0.00 0.00 2.40
239 240 2.973419 TTAAACCGTGCGTCCAAATC 57.027 45.000 0.00 0.00 0.00 2.17
240 241 3.315749 TCTTTTAAACCGTGCGTCCAAAT 59.684 39.130 0.00 0.00 0.00 2.32
241 242 2.681848 TCTTTTAAACCGTGCGTCCAAA 59.318 40.909 0.00 0.00 0.00 3.28
242 243 2.286872 TCTTTTAAACCGTGCGTCCAA 58.713 42.857 0.00 0.00 0.00 3.53
243 244 1.950828 TCTTTTAAACCGTGCGTCCA 58.049 45.000 0.00 0.00 0.00 4.02
244 245 4.666928 TTATCTTTTAAACCGTGCGTCC 57.333 40.909 0.00 0.00 0.00 4.79
245 246 5.908499 TGTTTTATCTTTTAAACCGTGCGTC 59.092 36.000 0.00 0.00 34.21 5.19
246 247 5.819059 TGTTTTATCTTTTAAACCGTGCGT 58.181 33.333 0.00 0.00 34.21 5.24
247 248 6.921332 ATGTTTTATCTTTTAAACCGTGCG 57.079 33.333 0.00 0.00 34.21 5.34
248 249 9.364110 CAAAATGTTTTATCTTTTAAACCGTGC 57.636 29.630 0.00 0.00 34.21 5.34
264 265 9.337091 CGTAGATCCGTTTATTCAAAATGTTTT 57.663 29.630 0.00 0.00 0.00 2.43
265 266 8.723311 TCGTAGATCCGTTTATTCAAAATGTTT 58.277 29.630 0.00 0.00 0.00 2.83
266 267 8.259049 TCGTAGATCCGTTTATTCAAAATGTT 57.741 30.769 0.00 0.00 0.00 2.71
267 268 7.837202 TCGTAGATCCGTTTATTCAAAATGT 57.163 32.000 0.00 0.00 0.00 2.71
268 269 9.549509 TTTTCGTAGATCCGTTTATTCAAAATG 57.450 29.630 0.00 0.00 35.04 2.32
293 294 5.923684 TCGCAACTTGTGAGTTTTTCTTTTT 59.076 32.000 0.65 0.00 43.48 1.94
294 295 5.465935 TCGCAACTTGTGAGTTTTTCTTTT 58.534 33.333 0.65 0.00 43.48 2.27
295 296 5.054390 TCGCAACTTGTGAGTTTTTCTTT 57.946 34.783 0.65 0.00 43.48 2.52
296 297 4.695217 TCGCAACTTGTGAGTTTTTCTT 57.305 36.364 0.65 0.00 43.48 2.52
297 298 4.900635 ATCGCAACTTGTGAGTTTTTCT 57.099 36.364 10.65 0.00 43.48 2.52
298 299 6.140737 CACTTATCGCAACTTGTGAGTTTTTC 59.859 38.462 10.65 0.00 43.48 2.29
299 300 5.971202 CACTTATCGCAACTTGTGAGTTTTT 59.029 36.000 10.65 0.00 43.48 1.94
300 301 5.505654 CCACTTATCGCAACTTGTGAGTTTT 60.506 40.000 10.65 0.00 43.48 2.43
301 302 4.024048 CCACTTATCGCAACTTGTGAGTTT 60.024 41.667 10.65 0.00 43.48 2.66
302 303 3.498397 CCACTTATCGCAACTTGTGAGTT 59.502 43.478 10.65 0.00 46.85 3.01
303 304 3.067106 CCACTTATCGCAACTTGTGAGT 58.933 45.455 10.65 1.34 40.54 3.41
304 305 2.159653 GCCACTTATCGCAACTTGTGAG 60.160 50.000 10.65 0.77 40.54 3.51
305 306 1.804151 GCCACTTATCGCAACTTGTGA 59.196 47.619 7.47 7.47 41.54 3.58
306 307 1.464023 CGCCACTTATCGCAACTTGTG 60.464 52.381 0.00 0.00 0.00 3.33
307 308 0.796312 CGCCACTTATCGCAACTTGT 59.204 50.000 0.00 0.00 0.00 3.16
308 309 3.586039 CGCCACTTATCGCAACTTG 57.414 52.632 0.00 0.00 0.00 3.16
314 315 1.154205 AGTGATGCGCCACTTATCGC 61.154 55.000 12.80 11.08 44.32 4.58
315 316 2.977700 AGTGATGCGCCACTTATCG 58.022 52.632 12.80 0.00 44.32 2.92
321 322 2.476051 CGACAAGTGATGCGCCAC 59.524 61.111 4.18 6.84 37.32 5.01
322 323 3.422303 GCGACAAGTGATGCGCCA 61.422 61.111 4.18 0.00 43.78 5.69
323 324 2.965147 TTGCGACAAGTGATGCGCC 61.965 57.895 4.18 0.00 46.70 6.53
325 326 1.154413 GGTTGCGACAAGTGATGCG 60.154 57.895 6.39 0.00 0.00 4.73
326 327 0.110056 CAGGTTGCGACAAGTGATGC 60.110 55.000 6.39 0.00 0.00 3.91
327 328 0.518636 CCAGGTTGCGACAAGTGATG 59.481 55.000 6.39 0.00 0.00 3.07
328 329 0.396435 TCCAGGTTGCGACAAGTGAT 59.604 50.000 6.39 0.00 0.00 3.06
329 330 0.179234 TTCCAGGTTGCGACAAGTGA 59.821 50.000 6.39 0.00 0.00 3.41
330 331 1.021202 TTTCCAGGTTGCGACAAGTG 58.979 50.000 6.39 0.00 0.00 3.16
331 332 1.757682 TTTTCCAGGTTGCGACAAGT 58.242 45.000 6.39 0.00 0.00 3.16
332 333 2.861462 TTTTTCCAGGTTGCGACAAG 57.139 45.000 6.39 0.00 0.00 3.16
333 334 2.223923 CCATTTTTCCAGGTTGCGACAA 60.224 45.455 6.39 0.00 0.00 3.18
334 335 1.339610 CCATTTTTCCAGGTTGCGACA 59.660 47.619 6.39 0.00 0.00 4.35
335 336 1.611491 TCCATTTTTCCAGGTTGCGAC 59.389 47.619 0.00 0.00 0.00 5.19
336 337 1.885887 CTCCATTTTTCCAGGTTGCGA 59.114 47.619 0.00 0.00 0.00 5.10
337 338 1.613437 ACTCCATTTTTCCAGGTTGCG 59.387 47.619 0.00 0.00 0.00 4.85
338 339 2.365293 ACACTCCATTTTTCCAGGTTGC 59.635 45.455 0.00 0.00 0.00 4.17
339 340 4.342092 AGAACACTCCATTTTTCCAGGTTG 59.658 41.667 0.00 0.00 0.00 3.77
340 341 4.546674 AGAACACTCCATTTTTCCAGGTT 58.453 39.130 0.00 0.00 0.00 3.50
341 342 4.184649 AGAACACTCCATTTTTCCAGGT 57.815 40.909 0.00 0.00 0.00 4.00
342 343 5.291971 CAAAGAACACTCCATTTTTCCAGG 58.708 41.667 0.00 0.00 0.00 4.45
343 344 4.746611 GCAAAGAACACTCCATTTTTCCAG 59.253 41.667 0.00 0.00 0.00 3.86
344 345 4.161189 TGCAAAGAACACTCCATTTTTCCA 59.839 37.500 0.00 0.00 0.00 3.53
345 346 4.692228 TGCAAAGAACACTCCATTTTTCC 58.308 39.130 0.00 0.00 0.00 3.13
346 347 5.276348 CGTTGCAAAGAACACTCCATTTTTC 60.276 40.000 6.52 0.00 0.00 2.29
347 348 4.566360 CGTTGCAAAGAACACTCCATTTTT 59.434 37.500 6.52 0.00 0.00 1.94
348 349 4.111916 CGTTGCAAAGAACACTCCATTTT 58.888 39.130 6.52 0.00 0.00 1.82
349 350 3.380004 TCGTTGCAAAGAACACTCCATTT 59.620 39.130 12.88 0.00 0.00 2.32
350 351 2.948979 TCGTTGCAAAGAACACTCCATT 59.051 40.909 12.88 0.00 0.00 3.16
351 352 2.549754 CTCGTTGCAAAGAACACTCCAT 59.450 45.455 15.91 0.00 0.00 3.41
352 353 1.939934 CTCGTTGCAAAGAACACTCCA 59.060 47.619 15.91 0.00 0.00 3.86
353 354 1.940613 ACTCGTTGCAAAGAACACTCC 59.059 47.619 15.91 0.00 0.00 3.85
354 355 3.802685 AGTACTCGTTGCAAAGAACACTC 59.197 43.478 15.91 5.78 0.00 3.51
355 356 3.793559 AGTACTCGTTGCAAAGAACACT 58.206 40.909 15.91 16.69 0.00 3.55
356 357 3.361724 CGAGTACTCGTTGCAAAGAACAC 60.362 47.826 32.24 14.96 46.99 3.32
357 358 2.792674 CGAGTACTCGTTGCAAAGAACA 59.207 45.455 32.24 4.24 46.99 3.18
358 359 3.419815 CGAGTACTCGTTGCAAAGAAC 57.580 47.619 32.24 11.95 46.99 3.01
370 371 9.148104 ACCAAAATCACTAATTAACGAGTACTC 57.852 33.333 13.18 13.18 0.00 2.59
371 372 9.498176 AACCAAAATCACTAATTAACGAGTACT 57.502 29.630 0.00 0.00 0.00 2.73
397 398 5.234329 TGCTCAAAACAAACGTGAACAAAAA 59.766 32.000 0.00 0.00 0.00 1.94
398 399 4.745125 TGCTCAAAACAAACGTGAACAAAA 59.255 33.333 0.00 0.00 0.00 2.44
399 400 4.299155 TGCTCAAAACAAACGTGAACAAA 58.701 34.783 0.00 0.00 0.00 2.83
400 401 3.902150 TGCTCAAAACAAACGTGAACAA 58.098 36.364 0.00 0.00 0.00 2.83
401 402 3.497118 CTGCTCAAAACAAACGTGAACA 58.503 40.909 0.00 0.00 0.00 3.18
402 403 2.851824 CCTGCTCAAAACAAACGTGAAC 59.148 45.455 0.00 0.00 0.00 3.18
403 404 2.490115 ACCTGCTCAAAACAAACGTGAA 59.510 40.909 0.00 0.00 0.00 3.18
404 405 2.088423 ACCTGCTCAAAACAAACGTGA 58.912 42.857 0.00 0.00 0.00 4.35
405 406 2.559998 ACCTGCTCAAAACAAACGTG 57.440 45.000 0.00 0.00 0.00 4.49
406 407 3.537580 TCTACCTGCTCAAAACAAACGT 58.462 40.909 0.00 0.00 0.00 3.99
407 408 3.058914 CCTCTACCTGCTCAAAACAAACG 60.059 47.826 0.00 0.00 0.00 3.60
408 409 3.253432 CCCTCTACCTGCTCAAAACAAAC 59.747 47.826 0.00 0.00 0.00 2.93
409 410 3.486383 CCCTCTACCTGCTCAAAACAAA 58.514 45.455 0.00 0.00 0.00 2.83
410 411 2.814097 GCCCTCTACCTGCTCAAAACAA 60.814 50.000 0.00 0.00 0.00 2.83
411 412 1.271379 GCCCTCTACCTGCTCAAAACA 60.271 52.381 0.00 0.00 0.00 2.83
412 413 1.454201 GCCCTCTACCTGCTCAAAAC 58.546 55.000 0.00 0.00 0.00 2.43
413 414 0.328258 GGCCCTCTACCTGCTCAAAA 59.672 55.000 0.00 0.00 0.00 2.44
414 415 1.899437 CGGCCCTCTACCTGCTCAAA 61.899 60.000 0.00 0.00 0.00 2.69
415 416 2.359169 CGGCCCTCTACCTGCTCAA 61.359 63.158 0.00 0.00 0.00 3.02
416 417 2.759973 CGGCCCTCTACCTGCTCA 60.760 66.667 0.00 0.00 0.00 4.26
417 418 3.541713 CCGGCCCTCTACCTGCTC 61.542 72.222 0.00 0.00 0.00 4.26
456 457 1.220817 GATTAGAGAGCAGCTGCCGC 61.221 60.000 34.39 25.83 43.38 6.53
457 458 0.938637 CGATTAGAGAGCAGCTGCCG 60.939 60.000 34.39 23.13 43.38 5.69
458 459 0.599728 CCGATTAGAGAGCAGCTGCC 60.600 60.000 34.39 24.64 43.38 4.85
459 460 1.220817 GCCGATTAGAGAGCAGCTGC 61.221 60.000 31.53 31.53 42.49 5.25
460 461 0.938637 CGCCGATTAGAGAGCAGCTG 60.939 60.000 10.11 10.11 0.00 4.24
461 462 1.361993 CGCCGATTAGAGAGCAGCT 59.638 57.895 0.00 0.00 0.00 4.24
462 463 2.306581 GCGCCGATTAGAGAGCAGC 61.307 63.158 0.00 0.00 0.00 5.25
463 464 0.938637 CAGCGCCGATTAGAGAGCAG 60.939 60.000 2.29 0.00 0.00 4.24
464 465 1.066422 CAGCGCCGATTAGAGAGCA 59.934 57.895 2.29 0.00 0.00 4.26
465 466 0.528684 AACAGCGCCGATTAGAGAGC 60.529 55.000 2.29 0.00 0.00 4.09
466 467 2.605823 CCTAACAGCGCCGATTAGAGAG 60.606 54.545 19.23 4.65 0.00 3.20
467 468 1.337071 CCTAACAGCGCCGATTAGAGA 59.663 52.381 19.23 0.00 0.00 3.10
468 469 1.603172 CCCTAACAGCGCCGATTAGAG 60.603 57.143 19.23 7.12 0.00 2.43
469 470 0.387929 CCCTAACAGCGCCGATTAGA 59.612 55.000 19.23 0.00 0.00 2.10
470 471 1.222115 GCCCTAACAGCGCCGATTAG 61.222 60.000 2.29 9.80 0.00 1.73
471 472 1.227438 GCCCTAACAGCGCCGATTA 60.227 57.895 2.29 0.00 0.00 1.75
472 473 2.513897 GCCCTAACAGCGCCGATT 60.514 61.111 2.29 0.00 0.00 3.34
473 474 4.547367 GGCCCTAACAGCGCCGAT 62.547 66.667 2.29 0.00 31.92 4.18
476 477 2.653953 TATTCGGCCCTAACAGCGCC 62.654 60.000 2.29 0.00 39.41 6.53
477 478 1.222115 CTATTCGGCCCTAACAGCGC 61.222 60.000 0.00 0.00 0.00 5.92
478 479 0.600255 CCTATTCGGCCCTAACAGCG 60.600 60.000 0.00 0.00 0.00 5.18
479 480 0.756903 TCCTATTCGGCCCTAACAGC 59.243 55.000 0.00 0.00 0.00 4.40
480 481 1.270358 GCTCCTATTCGGCCCTAACAG 60.270 57.143 0.00 0.00 0.00 3.16
481 482 0.756903 GCTCCTATTCGGCCCTAACA 59.243 55.000 0.00 0.00 0.00 2.41
482 483 1.001068 GAGCTCCTATTCGGCCCTAAC 59.999 57.143 0.87 0.00 0.00 2.34
483 484 1.339097 GAGCTCCTATTCGGCCCTAA 58.661 55.000 0.87 0.00 0.00 2.69
484 485 0.542232 GGAGCTCCTATTCGGCCCTA 60.542 60.000 26.25 0.00 0.00 3.53
485 486 1.839296 GGAGCTCCTATTCGGCCCT 60.839 63.158 26.25 0.00 0.00 5.19
486 487 2.744377 GGAGCTCCTATTCGGCCC 59.256 66.667 26.25 0.00 0.00 5.80
487 488 1.839296 AGGGAGCTCCTATTCGGCC 60.839 63.158 31.36 12.73 45.98 6.13
488 489 3.878358 AGGGAGCTCCTATTCGGC 58.122 61.111 31.36 13.49 45.98 5.54
509 510 2.106857 TCCTACGGCCTTTCCTCAAAAA 59.893 45.455 0.00 0.00 0.00 1.94
510 511 1.700739 TCCTACGGCCTTTCCTCAAAA 59.299 47.619 0.00 0.00 0.00 2.44
511 512 1.278127 CTCCTACGGCCTTTCCTCAAA 59.722 52.381 0.00 0.00 0.00 2.69
512 513 0.902531 CTCCTACGGCCTTTCCTCAA 59.097 55.000 0.00 0.00 0.00 3.02
513 514 1.614241 GCTCCTACGGCCTTTCCTCA 61.614 60.000 0.00 0.00 0.00 3.86
514 515 1.144276 GCTCCTACGGCCTTTCCTC 59.856 63.158 0.00 0.00 0.00 3.71
515 516 1.306226 AGCTCCTACGGCCTTTCCT 60.306 57.895 0.00 0.00 0.00 3.36
516 517 1.144276 GAGCTCCTACGGCCTTTCC 59.856 63.158 0.87 0.00 0.00 3.13
517 518 1.144276 GGAGCTCCTACGGCCTTTC 59.856 63.158 26.25 0.00 0.00 2.62
518 519 2.368011 GGGAGCTCCTACGGCCTTT 61.368 63.158 31.36 0.00 35.95 3.11
519 520 2.764547 GGGAGCTCCTACGGCCTT 60.765 66.667 31.36 0.00 35.95 4.35
520 521 3.756783 AGGGAGCTCCTACGGCCT 61.757 66.667 31.36 16.36 45.98 5.19
544 545 2.029649 AGCTCCTACGTACGCTCAAAAA 60.030 45.455 16.72 0.00 0.00 1.94
545 546 1.542915 AGCTCCTACGTACGCTCAAAA 59.457 47.619 16.72 0.00 0.00 2.44
546 547 1.131883 GAGCTCCTACGTACGCTCAAA 59.868 52.381 22.21 0.00 46.06 2.69
547 548 0.731417 GAGCTCCTACGTACGCTCAA 59.269 55.000 22.21 0.00 46.06 3.02
548 549 2.391469 GAGCTCCTACGTACGCTCA 58.609 57.895 22.21 0.00 46.06 4.26
549 550 1.648174 GGAGCTCCTACGTACGCTC 59.352 63.158 26.25 20.35 46.06 5.03
550 551 1.823041 GGGAGCTCCTACGTACGCT 60.823 63.158 31.36 2.28 35.95 5.07
551 552 1.823041 AGGGAGCTCCTACGTACGC 60.823 63.158 31.36 12.73 45.98 4.42
552 553 4.555610 AGGGAGCTCCTACGTACG 57.444 61.111 31.36 15.01 45.98 3.67
570 571 6.607004 TTTGTTCTGAGGGGTAAACAAAAA 57.393 33.333 9.16 0.00 44.27 1.94
572 573 6.381420 TGATTTTGTTCTGAGGGGTAAACAAA 59.619 34.615 7.86 7.86 45.05 2.83
573 574 5.894393 TGATTTTGTTCTGAGGGGTAAACAA 59.106 36.000 0.00 0.00 39.21 2.83
574 575 5.450453 TGATTTTGTTCTGAGGGGTAAACA 58.550 37.500 0.00 0.00 0.00 2.83
575 576 6.399639 TTGATTTTGTTCTGAGGGGTAAAC 57.600 37.500 0.00 0.00 0.00 2.01
576 577 6.210584 GGATTGATTTTGTTCTGAGGGGTAAA 59.789 38.462 0.00 0.00 0.00 2.01
577 578 5.714806 GGATTGATTTTGTTCTGAGGGGTAA 59.285 40.000 0.00 0.00 0.00 2.85
578 579 5.261216 GGATTGATTTTGTTCTGAGGGGTA 58.739 41.667 0.00 0.00 0.00 3.69
579 580 4.089361 GGATTGATTTTGTTCTGAGGGGT 58.911 43.478 0.00 0.00 0.00 4.95
580 581 3.129287 CGGATTGATTTTGTTCTGAGGGG 59.871 47.826 0.00 0.00 0.00 4.79
581 582 3.428045 GCGGATTGATTTTGTTCTGAGGG 60.428 47.826 0.00 0.00 0.00 4.30
582 583 3.441572 AGCGGATTGATTTTGTTCTGAGG 59.558 43.478 0.00 0.00 0.00 3.86
583 584 4.691860 AGCGGATTGATTTTGTTCTGAG 57.308 40.909 0.00 0.00 0.00 3.35
584 585 5.452078 AAAGCGGATTGATTTTGTTCTGA 57.548 34.783 0.00 0.00 30.48 3.27
585 586 6.529463 AAAAAGCGGATTGATTTTGTTCTG 57.471 33.333 0.00 0.00 44.91 3.02
606 607 5.357032 AGCAGAAGAAAAGGACGAAGAAAAA 59.643 36.000 0.00 0.00 0.00 1.94
607 608 4.881850 AGCAGAAGAAAAGGACGAAGAAAA 59.118 37.500 0.00 0.00 0.00 2.29
608 609 4.273480 CAGCAGAAGAAAAGGACGAAGAAA 59.727 41.667 0.00 0.00 0.00 2.52
609 610 3.809832 CAGCAGAAGAAAAGGACGAAGAA 59.190 43.478 0.00 0.00 0.00 2.52
610 611 3.393800 CAGCAGAAGAAAAGGACGAAGA 58.606 45.455 0.00 0.00 0.00 2.87
611 612 2.096019 GCAGCAGAAGAAAAGGACGAAG 60.096 50.000 0.00 0.00 0.00 3.79
612 613 1.873591 GCAGCAGAAGAAAAGGACGAA 59.126 47.619 0.00 0.00 0.00 3.85
613 614 1.202639 TGCAGCAGAAGAAAAGGACGA 60.203 47.619 0.00 0.00 0.00 4.20
614 615 1.229428 TGCAGCAGAAGAAAAGGACG 58.771 50.000 0.00 0.00 0.00 4.79
615 616 2.163211 GGATGCAGCAGAAGAAAAGGAC 59.837 50.000 3.51 0.00 0.00 3.85
616 617 2.040813 AGGATGCAGCAGAAGAAAAGGA 59.959 45.455 3.51 0.00 0.00 3.36
617 618 2.444421 AGGATGCAGCAGAAGAAAAGG 58.556 47.619 3.51 0.00 0.00 3.11
618 619 3.757493 AGAAGGATGCAGCAGAAGAAAAG 59.243 43.478 3.51 0.00 0.00 2.27
619 620 3.755378 GAGAAGGATGCAGCAGAAGAAAA 59.245 43.478 3.51 0.00 0.00 2.29
620 621 3.008813 AGAGAAGGATGCAGCAGAAGAAA 59.991 43.478 3.51 0.00 0.00 2.52
621 622 2.570752 AGAGAAGGATGCAGCAGAAGAA 59.429 45.455 3.51 0.00 0.00 2.52
622 623 2.186243 AGAGAAGGATGCAGCAGAAGA 58.814 47.619 3.51 0.00 0.00 2.87
623 624 2.695127 AGAGAAGGATGCAGCAGAAG 57.305 50.000 3.51 0.00 0.00 2.85
624 625 3.430042 AAAGAGAAGGATGCAGCAGAA 57.570 42.857 3.51 0.00 0.00 3.02
625 626 3.430042 AAAAGAGAAGGATGCAGCAGA 57.570 42.857 3.51 0.00 0.00 4.26
650 651 6.772716 AGAAGGATGCAGAAGTTACTCAAAAA 59.227 34.615 0.00 0.00 0.00 1.94
651 652 6.299141 AGAAGGATGCAGAAGTTACTCAAAA 58.701 36.000 0.00 0.00 0.00 2.44
652 653 5.869579 AGAAGGATGCAGAAGTTACTCAAA 58.130 37.500 0.00 0.00 0.00 2.69
653 654 5.489792 AGAAGGATGCAGAAGTTACTCAA 57.510 39.130 0.00 0.00 0.00 3.02
654 655 5.482908 GAAGAAGGATGCAGAAGTTACTCA 58.517 41.667 0.00 0.00 0.00 3.41
655 656 4.873259 GGAAGAAGGATGCAGAAGTTACTC 59.127 45.833 0.00 0.00 0.00 2.59
656 657 4.534103 AGGAAGAAGGATGCAGAAGTTACT 59.466 41.667 0.00 0.00 0.00 2.24
657 658 4.837972 AGGAAGAAGGATGCAGAAGTTAC 58.162 43.478 0.00 0.00 0.00 2.50
658 659 5.505181 AAGGAAGAAGGATGCAGAAGTTA 57.495 39.130 0.00 0.00 0.00 2.24
659 660 4.379302 AAGGAAGAAGGATGCAGAAGTT 57.621 40.909 0.00 0.00 0.00 2.66
660 661 4.331108 GAAAGGAAGAAGGATGCAGAAGT 58.669 43.478 0.00 0.00 0.00 3.01
661 662 3.693578 GGAAAGGAAGAAGGATGCAGAAG 59.306 47.826 0.00 0.00 0.00 2.85
662 663 3.074390 TGGAAAGGAAGAAGGATGCAGAA 59.926 43.478 0.00 0.00 0.00 3.02
663 664 2.644299 TGGAAAGGAAGAAGGATGCAGA 59.356 45.455 0.00 0.00 0.00 4.26
689 690 1.399727 CGGTGCGGCAAGAAACTTTAG 60.400 52.381 3.23 0.00 0.00 1.85
690 691 0.589223 CGGTGCGGCAAGAAACTTTA 59.411 50.000 3.23 0.00 0.00 1.85
691 692 1.098712 TCGGTGCGGCAAGAAACTTT 61.099 50.000 3.23 0.00 0.00 2.66
727 728 2.289320 CGAATGGCCTAGAGAGAATGGG 60.289 54.545 3.32 0.00 0.00 4.00
736 737 1.868713 TTGTACCCGAATGGCCTAGA 58.131 50.000 3.32 0.00 37.83 2.43
737 738 2.561569 CTTTGTACCCGAATGGCCTAG 58.438 52.381 3.32 0.00 37.83 3.02
738 739 1.407712 GCTTTGTACCCGAATGGCCTA 60.408 52.381 3.32 0.00 37.83 3.93
739 740 0.679960 GCTTTGTACCCGAATGGCCT 60.680 55.000 3.32 0.00 37.83 5.19
740 741 0.963355 TGCTTTGTACCCGAATGGCC 60.963 55.000 0.00 0.00 37.83 5.36
741 742 0.170339 GTGCTTTGTACCCGAATGGC 59.830 55.000 0.00 0.00 37.83 4.40
742 743 0.446222 CGTGCTTTGTACCCGAATGG 59.554 55.000 0.00 0.00 41.37 3.16
743 744 0.446222 CCGTGCTTTGTACCCGAATG 59.554 55.000 0.00 0.00 0.00 2.67
744 745 0.675522 CCCGTGCTTTGTACCCGAAT 60.676 55.000 0.00 0.00 0.00 3.34
745 746 1.301874 CCCGTGCTTTGTACCCGAA 60.302 57.895 0.00 0.00 0.00 4.30
746 747 2.042404 AACCCGTGCTTTGTACCCGA 62.042 55.000 0.00 0.00 0.00 5.14
749 750 1.601166 AGAAACCCGTGCTTTGTACC 58.399 50.000 0.00 0.00 0.00 3.34
752 753 2.375146 AGAAAGAAACCCGTGCTTTGT 58.625 42.857 0.00 0.00 32.45 2.83
753 754 3.066760 AGAAGAAAGAAACCCGTGCTTTG 59.933 43.478 0.00 0.00 32.45 2.77
754 755 3.288092 AGAAGAAAGAAACCCGTGCTTT 58.712 40.909 0.00 0.00 34.79 3.51
755 756 2.879026 GAGAAGAAAGAAACCCGTGCTT 59.121 45.455 0.00 0.00 0.00 3.91
756 757 2.495084 GAGAAGAAAGAAACCCGTGCT 58.505 47.619 0.00 0.00 0.00 4.40
757 758 1.194772 CGAGAAGAAAGAAACCCGTGC 59.805 52.381 0.00 0.00 0.00 5.34
759 760 1.509703 GCGAGAAGAAAGAAACCCGT 58.490 50.000 0.00 0.00 0.00 5.28
760 761 0.796927 GGCGAGAAGAAAGAAACCCG 59.203 55.000 0.00 0.00 0.00 5.28
761 762 1.166129 GGGCGAGAAGAAAGAAACCC 58.834 55.000 0.00 0.00 0.00 4.11
837 854 6.375736 GGTTTATTTCTTGGGAGAGAAGAAGG 59.624 42.308 0.00 0.00 39.86 3.46
1344 1363 2.046988 TCGTCGTACTCGAGGCCA 60.047 61.111 18.41 0.00 46.96 5.36
1407 1426 4.243008 TCGGCGTTGAACTGGGCA 62.243 61.111 6.85 0.00 0.00 5.36
1491 1510 4.155280 TCGTCGAGTATGATGTTGAACTCA 59.845 41.667 0.00 0.00 38.60 3.41
1869 1888 7.015195 ACAAGATATGTTTGGGCAAGTAAAACT 59.985 33.333 0.00 0.00 40.06 2.66
1895 1915 4.464951 ACCATAGTTTAGTCCGTCATGACA 59.535 41.667 24.93 4.12 37.73 3.58
1950 1970 9.581289 TTGTCCCAAGATATTCAAACTTAAAGA 57.419 29.630 0.00 0.00 0.00 2.52
1965 1988 5.520748 ACTACCAGATTTTGTCCCAAGAT 57.479 39.130 0.00 0.00 0.00 2.40
2037 2063 3.630312 TCAACACCACCAGAAAGCTTAAC 59.370 43.478 0.00 0.00 0.00 2.01
2078 2104 5.905733 CGAGCAAACATCATAAGCATAAGTG 59.094 40.000 0.00 0.00 0.00 3.16
2101 2127 5.576704 CGTTCGAAACAATGAAATCAAACG 58.423 37.500 0.00 0.00 0.00 3.60
2129 2155 2.689471 TGACTGATGCAAAGCAACAACT 59.311 40.909 3.63 0.00 43.62 3.16
2131 2157 2.034939 CCTGACTGATGCAAAGCAACAA 59.965 45.455 3.63 0.00 43.62 2.83
2140 2166 5.422012 TCAATAAGTAGTCCTGACTGATGCA 59.578 40.000 10.02 0.00 42.52 3.96
2150 2176 5.431765 CAGGCAACATCAATAAGTAGTCCT 58.568 41.667 0.00 0.00 41.41 3.85
2151 2178 4.035675 GCAGGCAACATCAATAAGTAGTCC 59.964 45.833 0.00 0.00 41.41 3.85
2203 2230 9.569122 AGTGCCTAAGTTTCTAAAACAAAGATA 57.431 29.630 5.46 0.00 0.00 1.98
2220 2247 9.807649 AATTATATTTTTGAAGCAGTGCCTAAG 57.192 29.630 12.58 0.00 0.00 2.18
2258 2285 5.068198 CCAGACATAGCACTGCCAATTTTAT 59.932 40.000 0.00 0.00 33.40 1.40
2300 2327 4.627467 GGTAGTACATCAGTTGCAGAACAG 59.373 45.833 2.06 0.00 34.17 3.16
2343 2370 3.006430 CCAACCCCATGTTTTACTTCCAC 59.994 47.826 0.00 0.00 34.00 4.02
2385 2412 4.702131 GGCATATCATACCCAGAATTGACC 59.298 45.833 0.00 0.00 0.00 4.02
2461 2488 7.058298 GCTAAAGCTAGTAAACAACCAGTAC 57.942 40.000 0.00 0.00 38.21 2.73
2537 2564 8.982723 GCCTATCATATCTAGAATTGACCCTTA 58.017 37.037 9.45 0.38 0.00 2.69
2570 2597 7.907194 GCTAAAGCTAGTAAACAACCTATCAC 58.093 38.462 0.00 0.00 38.21 3.06
2606 2633 4.824289 AGGCAAGTTAAAAGGATGCATTG 58.176 39.130 0.00 0.00 38.73 2.82
2679 2706 9.110502 GCTAAAGCTAGTAAACAACCTATCATT 57.889 33.333 0.00 0.00 38.21 2.57
2731 2868 3.691609 ACACTATAGAAGCAAAGGCAAGC 59.308 43.478 6.78 0.00 44.61 4.01
2741 2878 5.636965 CACTGGCATATCACACTATAGAAGC 59.363 44.000 6.78 0.00 0.00 3.86
2766 2903 4.397103 ACATCACAGCAACAACCTATCATG 59.603 41.667 0.00 0.00 0.00 3.07
2807 2944 4.155099 TCACAAATAGGGCATGTGTTAACG 59.845 41.667 0.26 0.00 43.72 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.